Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63094.t1 | XP_003628587.2 | 92.5 | 453 | 34 | 0 | 1 | 453 | 464 | 916 | 1.80E-242 | 848.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63094.t1 | Q9FJT2 | 27.4 | 442 | 274 | 15 | 26 | 445 | 15 | 431 | 3.4e-16 | 87.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63094.t1 | G7LEM0 | 86.9 | 482 | 34 | 2 | 1 | 453 | 1 | 482 | 1.0e-236 | 828.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63094.t1 | MTR_8g062300 | 86.929 | 482 | 34 | 2 | 1 | 453 | 1 | 482 | 0.0 | 842 |
MS.gene63094.t1 | MTR_8g070950 | 58.785 | 461 | 158 | 10 | 1 | 452 | 1 | 438 | 2.69e-165 | 473 |
MS.gene63094.t1 | MTR_8g062010 | 59.310 | 435 | 160 | 9 | 26 | 452 | 9 | 434 | 1.00e-160 | 461 |
MS.gene63094.t1 | MTR_8g062080 | 54.310 | 464 | 182 | 9 | 3 | 453 | 4 | 450 | 1.27e-157 | 454 |
MS.gene63094.t1 | MTR_8g062310 | 56.381 | 431 | 169 | 8 | 22 | 452 | 21 | 432 | 1.26e-153 | 443 |
MS.gene63094.t1 | MTR_8g058965 | 50.847 | 472 | 189 | 9 | 13 | 453 | 2 | 461 | 8.65e-145 | 421 |
MS.gene63094.t1 | MTR_8g469020 | 50.763 | 459 | 184 | 10 | 26 | 452 | 7 | 455 | 4.24e-140 | 409 |
MS.gene63094.t1 | MTR_4g050250 | 49.517 | 414 | 158 | 12 | 22 | 394 | 17 | 420 | 9.93e-112 | 336 |
MS.gene63094.t1 | MTR_8g467790 | 48.446 | 386 | 144 | 8 | 25 | 393 | 147 | 494 | 5.74e-102 | 313 |
MS.gene63094.t1 | MTR_2g083840 | 40.355 | 451 | 237 | 14 | 21 | 448 | 16 | 457 | 2.34e-81 | 259 |
MS.gene63094.t1 | MTR_8g058970 | 38.557 | 485 | 247 | 16 | 7 | 448 | 1 | 477 | 9.29e-79 | 253 |
MS.gene63094.t1 | MTR_8g062270 | 39.301 | 458 | 228 | 18 | 23 | 447 | 13 | 453 | 1.50e-77 | 249 |
MS.gene63094.t1 | MTR_8g468810 | 38.947 | 475 | 245 | 16 | 5 | 448 | 3 | 463 | 1.91e-77 | 249 |
MS.gene63094.t1 | MTR_2g086020 | 80.282 | 142 | 28 | 0 | 311 | 452 | 178 | 319 | 2.13e-73 | 234 |
MS.gene63094.t1 | MTR_2g086020 | 59.589 | 146 | 54 | 4 | 52 | 196 | 1 | 142 | 1.34e-41 | 150 |
MS.gene63094.t1 | MTR_8g014260 | 37.500 | 472 | 250 | 17 | 1 | 448 | 1 | 451 | 4.38e-72 | 234 |
MS.gene63094.t1 | MTR_5g092960 | 35.745 | 470 | 259 | 11 | 9 | 447 | 4 | 461 | 1.52e-69 | 228 |
MS.gene63094.t1 | MTR_8g467800 | 38.717 | 452 | 241 | 13 | 21 | 448 | 14 | 453 | 4.07e-68 | 224 |
MS.gene63094.t1 | MTR_4g032730 | 34.937 | 478 | 255 | 12 | 13 | 447 | 2 | 466 | 6.57e-68 | 224 |
MS.gene63094.t1 | MTR_8g468760 | 35.730 | 459 | 223 | 15 | 19 | 447 | 2 | 418 | 3.64e-64 | 213 |
MS.gene63094.t1 | MTR_8g468840 | 35.938 | 448 | 247 | 13 | 26 | 446 | 14 | 448 | 5.39e-64 | 213 |
MS.gene63094.t1 | MTR_8g445780 | 37.838 | 407 | 217 | 17 | 13 | 401 | 2 | 390 | 9.18e-56 | 190 |
MS.gene63094.t1 | MTR_8g468810 | 38.903 | 383 | 191 | 15 | 5 | 358 | 3 | 371 | 5.49e-54 | 185 |
MS.gene63094.t1 | MTR_5g092960 | 35.544 | 377 | 207 | 9 | 9 | 358 | 4 | 371 | 7.33e-48 | 169 |
MS.gene63094.t1 | MTR_8g077460 | 32.517 | 449 | 208 | 18 | 19 | 448 | 3 | 375 | 9.81e-45 | 160 |
MS.gene63094.t1 | MTR_8g468810 | 40.196 | 306 | 148 | 13 | 5 | 288 | 3 | 295 | 1.61e-44 | 158 |
MS.gene63094.t1 | MTR_8g468810 | 40.196 | 306 | 148 | 13 | 5 | 288 | 3 | 295 | 1.72e-44 | 158 |
MS.gene63094.t1 | MTR_8g468810 | 39.024 | 328 | 165 | 13 | 5 | 310 | 3 | 317 | 4.00e-44 | 158 |
MS.gene63094.t1 | MTR_8g014160 | 31.390 | 446 | 222 | 15 | 26 | 448 | 41 | 425 | 1.48e-41 | 153 |
MS.gene63094.t1 | MTR_8g467800 | 38.730 | 315 | 164 | 11 | 13 | 310 | 9 | 311 | 1.26e-34 | 132 |
MS.gene63094.t1 | MTR_3g099800 | 67.816 | 87 | 27 | 1 | 360 | 445 | 19 | 105 | 2.81e-31 | 116 |
MS.gene63094.t1 | MTR_4g024710 | 34.007 | 297 | 174 | 11 | 167 | 448 | 58 | 347 | 6.14e-31 | 122 |
MS.gene63094.t1 | MTR_8g014210 | 40.323 | 186 | 106 | 5 | 264 | 448 | 50 | 231 | 4.68e-27 | 108 |
MS.gene63094.t1 | MTR_1g041245 | 29.909 | 438 | 232 | 18 | 25 | 448 | 10 | 386 | 5.04e-25 | 106 |
MS.gene63094.t1 | MTR_7g098510 | 25.858 | 437 | 257 | 11 | 21 | 448 | 13 | 391 | 1.11e-24 | 105 |
MS.gene63094.t1 | MTR_3g107100 | 28.953 | 449 | 244 | 19 | 20 | 448 | 5 | 398 | 1.69e-24 | 105 |
MS.gene63094.t1 | MTR_5g084070 | 27.907 | 430 | 274 | 16 | 25 | 440 | 12 | 419 | 1.01e-23 | 103 |
MS.gene63094.t1 | MTR_7g056433 | 28.111 | 434 | 245 | 17 | 26 | 448 | 12 | 389 | 2.95e-23 | 101 |
MS.gene63094.t1 | MTR_3g108150 | 28.009 | 432 | 243 | 15 | 26 | 447 | 13 | 386 | 1.51e-21 | 96.3 |
MS.gene63094.t1 | MTR_2g007450 | 27.669 | 459 | 255 | 21 | 16 | 445 | 7 | 417 | 3.99e-21 | 95.5 |
MS.gene63094.t1 | MTR_5g080710 | 27.546 | 432 | 280 | 15 | 25 | 440 | 32 | 446 | 5.84e-21 | 95.5 |
MS.gene63094.t1 | MTR_4g024745 | 32.624 | 282 | 164 | 11 | 167 | 431 | 12 | 284 | 6.56e-21 | 92.8 |
MS.gene63094.t1 | MTR_1089s0010 | 25.508 | 443 | 249 | 19 | 21 | 448 | 3 | 379 | 1.43e-20 | 93.6 |
MS.gene63094.t1 | MTR_5g021550 | 42.949 | 156 | 74 | 8 | 20 | 166 | 13 | 162 | 3.38e-20 | 87.8 |
MS.gene63094.t1 | MTR_3g107160 | 27.119 | 413 | 221 | 17 | 22 | 415 | 5 | 356 | 2.25e-19 | 90.1 |
MS.gene63094.t1 | MTR_7g098480 | 27.002 | 437 | 248 | 14 | 21 | 447 | 13 | 388 | 5.41e-19 | 89.7 |
MS.gene63094.t1 | MTR_3g107120 | 26.730 | 419 | 227 | 16 | 20 | 415 | 3 | 364 | 1.47e-18 | 87.8 |
MS.gene63094.t1 | MTR_2g036470 | 26.577 | 444 | 258 | 19 | 18 | 447 | 6 | 395 | 1.99e-18 | 87.4 |
MS.gene63094.t1 | MTR_5g045170 | 26.027 | 438 | 256 | 16 | 28 | 453 | 16 | 397 | 4.35e-18 | 86.3 |
MS.gene63094.t1 | MTR_5g008950 | 24.424 | 434 | 246 | 16 | 28 | 448 | 1 | 365 | 4.51e-18 | 85.9 |
MS.gene63094.t1 | MTR_5g073420 | 25.424 | 413 | 216 | 16 | 25 | 419 | 10 | 348 | 9.22e-18 | 85.1 |
MS.gene63094.t1 | MTR_3g036250 | 26.879 | 439 | 222 | 21 | 26 | 445 | 5 | 363 | 1.56e-17 | 84.3 |
MS.gene63094.t1 | MTR_8g014290 | 38.217 | 157 | 76 | 8 | 26 | 167 | 10 | 160 | 2.37e-17 | 79.7 |
MS.gene63094.t1 | MTR_6g022360 | 24.528 | 424 | 251 | 14 | 2 | 419 | 19 | 379 | 1.16e-16 | 82.0 |
MS.gene63094.t1 | MTR_3g023630 | 27.169 | 438 | 238 | 21 | 23 | 448 | 5 | 373 | 1.47e-16 | 81.3 |
MS.gene63094.t1 | MTR_7g056447 | 31.707 | 205 | 121 | 8 | 26 | 224 | 9 | 200 | 1.64e-16 | 80.1 |
MS.gene63094.t1 | MTR_5g007410 | 25.581 | 430 | 256 | 15 | 28 | 445 | 28 | 405 | 3.61e-16 | 80.9 |
MS.gene63094.t1 | MTR_2g008320 | 25.287 | 435 | 256 | 14 | 25 | 448 | 51 | 427 | 4.14e-16 | 80.5 |
MS.gene63094.t1 | MTR_7g007080 | 27.252 | 433 | 242 | 18 | 26 | 445 | 4 | 376 | 4.95e-16 | 80.1 |
MS.gene63094.t1 | MTR_2g007400 | 25.277 | 451 | 252 | 17 | 25 | 448 | 11 | 403 | 5.46e-16 | 80.1 |
MS.gene63094.t1 | MTR_7g056430 | 25.761 | 427 | 231 | 15 | 26 | 442 | 9 | 359 | 5.50e-16 | 81.3 |
MS.gene63094.t1 | MTR_7g055943 | 25.325 | 462 | 254 | 21 | 12 | 448 | 26 | 421 | 5.92e-16 | 80.1 |
MS.gene63094.t1 | MTR_7g056420 | 25.761 | 427 | 231 | 15 | 26 | 442 | 9 | 359 | 7.57e-16 | 80.9 |
MS.gene63094.t1 | MTR_4g024720 | 40.141 | 142 | 65 | 8 | 1 | 136 | 1 | 128 | 7.76e-16 | 76.6 |
MS.gene63094.t1 | MTR_7g115270 | 25.806 | 434 | 262 | 15 | 26 | 445 | 12 | 399 | 7.82e-16 | 79.3 |
MS.gene63094.t1 | MTR_5g008920 | 25.676 | 444 | 241 | 21 | 23 | 448 | 9 | 381 | 8.35e-15 | 76.3 |
MS.gene63094.t1 | MTR_5g083890 | 24.885 | 434 | 257 | 16 | 26 | 435 | 6 | 394 | 2.31e-14 | 75.5 |
MS.gene63094.t1 | MTR_6g022500 | 25.542 | 415 | 226 | 19 | 19 | 415 | 94 | 443 | 2.59e-14 | 75.1 |
MS.gene63094.t1 | MTR_7g026500 | 24.330 | 448 | 246 | 16 | 26 | 447 | 14 | 394 | 6.32e-14 | 73.6 |
MS.gene63094.t1 | MTR_5g058000 | 25.747 | 435 | 244 | 19 | 25 | 447 | 7 | 374 | 1.50e-13 | 72.4 |
MS.gene63094.t1 | MTR_7g032380 | 33.503 | 197 | 113 | 8 | 25 | 216 | 10 | 193 | 2.82e-13 | 71.2 |
MS.gene63094.t1 | MTR_3g040700 | 24.688 | 401 | 220 | 15 | 26 | 414 | 43 | 373 | 6.44e-13 | 70.9 |
MS.gene63094.t1 | MTR_1g107385 | 26.096 | 479 | 249 | 19 | 11 | 445 | 3 | 420 | 7.68e-13 | 70.5 |
MS.gene63094.t1 | MTR_8g014230 | 39.286 | 84 | 49 | 2 | 358 | 441 | 17 | 98 | 1.14e-12 | 64.7 |
MS.gene63094.t1 | MTR_3g467400 | 29.808 | 208 | 121 | 9 | 26 | 217 | 3 | 201 | 2.50e-12 | 68.6 |
MS.gene63094.t1 | MTR_8g085430 | 30.049 | 203 | 119 | 7 | 25 | 216 | 10 | 200 | 3.06e-12 | 67.8 |
MS.gene63094.t1 | MTR_4g098590 | 26.620 | 432 | 219 | 20 | 28 | 427 | 1 | 366 | 5.38e-12 | 67.4 |
MS.gene63094.t1 | MTR_8g468910 | 31.980 | 197 | 106 | 8 | 7 | 191 | 29 | 209 | 6.72e-12 | 67.4 |
MS.gene63094.t1 | MTR_7g032370 | 33.577 | 137 | 83 | 3 | 319 | 448 | 217 | 352 | 9.62e-12 | 66.6 |
MS.gene63094.t1 | MTR_1g492880 | 40.698 | 86 | 49 | 2 | 26 | 110 | 6 | 90 | 3.03e-11 | 60.1 |
MS.gene63094.t1 | MTR_2g007500 | 30.882 | 204 | 106 | 8 | 22 | 216 | 10 | 187 | 3.17e-11 | 64.7 |
MS.gene63094.t1 | MTR_4g113810 | 35.537 | 121 | 67 | 5 | 107 | 221 | 3 | 118 | 4.34e-11 | 62.0 |
MS.gene63094.t1 | MTR_1g492880 | 40.698 | 86 | 49 | 2 | 26 | 110 | 6 | 90 | 4.43e-11 | 60.1 |
MS.gene63094.t1 | MTR_4g024770 | 48.611 | 72 | 27 | 2 | 1 | 72 | 8 | 69 | 7.78e-11 | 58.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63094.t1 | AT5G56420 | 26.444 | 450 | 271 | 15 | 26 | 448 | 6 | 422 | 1.89e-20 | 93.6 |
MS.gene63094.t1 | AT5G56420 | 26.444 | 450 | 271 | 15 | 26 | 448 | 6 | 422 | 1.89e-20 | 93.6 |
MS.gene63094.t1 | AT5G56420 | 26.444 | 450 | 271 | 15 | 26 | 448 | 6 | 422 | 1.89e-20 | 93.6 |
MS.gene63094.t1 | AT5G56560 | 27.982 | 436 | 275 | 20 | 28 | 448 | 7 | 418 | 3.70e-17 | 83.6 |
MS.gene63094.t1 | AT4G26340 | 27.027 | 444 | 279 | 16 | 25 | 448 | 1 | 419 | 1.17e-16 | 82.0 |
MS.gene63094.t1 | AT3G50710 | 26.134 | 463 | 267 | 18 | 25 | 448 | 1 | 427 | 2.70e-16 | 81.3 |
MS.gene63094.t1 | AT5G56440 | 25.597 | 461 | 273 | 15 | 25 | 447 | 1 | 429 | 1.39e-15 | 79.0 |
MS.gene63094.t1 | AT1G69630 | 25.104 | 482 | 261 | 19 | 20 | 445 | 11 | 448 | 6.05e-15 | 77.0 |
MS.gene63094.t1 | AT5G60610 | 24.455 | 413 | 263 | 15 | 25 | 415 | 1 | 386 | 6.93e-15 | 76.6 |
MS.gene63094.t1 | AT5G60610 | 24.455 | 413 | 263 | 15 | 25 | 415 | 1 | 386 | 6.93e-15 | 76.6 |
MS.gene63094.t1 | AT1G66290 | 25.311 | 482 | 286 | 28 | 2 | 445 | 5 | 450 | 7.42e-15 | 77.0 |
MS.gene63094.t1 | AT5G53840 | 25.159 | 473 | 272 | 19 | 15 | 445 | 5 | 437 | 9.07e-15 | 76.6 |
MS.gene63094.t1 | AT3G42770 | 25.561 | 446 | 270 | 13 | 28 | 440 | 1 | 417 | 1.06e-14 | 76.6 |
MS.gene63094.t1 | AT5G56810 | 26.940 | 464 | 281 | 18 | 7 | 445 | 1 | 431 | 1.35e-14 | 75.9 |
MS.gene63094.t1 | AT5G44940 | 23.853 | 436 | 260 | 14 | 24 | 448 | 3 | 377 | 3.81e-14 | 74.3 |
MS.gene63094.t1 | AT3G59160 | 28.507 | 221 | 120 | 8 | 26 | 217 | 13 | 224 | 4.91e-14 | 74.3 |
MS.gene63094.t1 | AT5G50270 | 25.117 | 426 | 262 | 12 | 25 | 420 | 1 | 399 | 3.73e-13 | 71.2 |
MS.gene63094.t1 | AT1G16930 | 31.818 | 198 | 111 | 10 | 26 | 216 | 15 | 195 | 7.02e-13 | 70.9 |
MS.gene63094.t1 | AT1G16930 | 31.818 | 198 | 111 | 10 | 26 | 216 | 15 | 195 | 7.02e-13 | 70.9 |
MS.gene63094.t1 | AT1G16930 | 31.818 | 198 | 111 | 10 | 26 | 216 | 15 | 195 | 7.02e-13 | 70.9 |
MS.gene63094.t1 | AT1G13780 | 24.569 | 464 | 285 | 18 | 26 | 445 | 10 | 452 | 8.42e-13 | 70.5 |
MS.gene63094.t1 | AT3G59190 | 30.348 | 201 | 117 | 9 | 26 | 214 | 12 | 201 | 3.06e-12 | 68.9 |
MS.gene63094.t1 | AT3G59190 | 30.348 | 201 | 117 | 9 | 26 | 214 | 12 | 201 | 3.66e-12 | 68.2 |
MS.gene63094.t1 | AT1G51370 | 25.708 | 459 | 271 | 18 | 17 | 443 | 10 | 430 | 3.89e-12 | 68.2 |
MS.gene63094.t1 | AT3G59170 | 30.455 | 220 | 113 | 9 | 26 | 214 | 7 | 217 | 7.83e-12 | 67.4 |
MS.gene63094.t1 | AT1G78760 | 23.861 | 461 | 283 | 20 | 26 | 449 | 16 | 445 | 7.83e-12 | 67.4 |
MS.gene63094.t1 | AT1G55030 | 26.096 | 456 | 279 | 20 | 19 | 447 | 7 | 431 | 9.57e-12 | 67.0 |
MS.gene63094.t1 | AT4G14103 | 28.571 | 196 | 122 | 6 | 26 | 214 | 8 | 192 | 1.22e-11 | 67.0 |
MS.gene63094.t1 | AT1G66310 | 24.895 | 474 | 281 | 22 | 10 | 445 | 3 | 439 | 1.31e-11 | 66.6 |
MS.gene63094.t1 | AT2G42720 | 30.256 | 195 | 126 | 5 | 25 | 214 | 1 | 190 | 1.35e-11 | 66.6 |
MS.gene63094.t1 | AT1G55030 | 25.721 | 451 | 282 | 19 | 19 | 447 | 2 | 421 | 1.36e-11 | 66.6 |
MS.gene63094.t1 | AT3G59200 | 28.141 | 199 | 121 | 6 | 26 | 214 | 7 | 193 | 1.60e-11 | 66.2 |
MS.gene63094.t1 | AT4G14103 | 28.571 | 196 | 122 | 6 | 26 | 214 | 8 | 192 | 1.75e-11 | 66.2 |
MS.gene63094.t1 | AT4G14103 | 28.571 | 196 | 122 | 6 | 26 | 214 | 8 | 192 | 1.75e-11 | 66.2 |
MS.gene63094.t1 | AT5G22720 | 23.744 | 438 | 258 | 18 | 26 | 415 | 23 | 432 | 2.49e-11 | 65.9 |
MS.gene63094.t1 | AT3G59200 | 28.141 | 199 | 121 | 6 | 26 | 214 | 7 | 193 | 2.53e-11 | 66.2 |
MS.gene63094.t1 | AT3G26922 | 27.007 | 274 | 170 | 7 | 17 | 285 | 5 | 253 | 2.92e-11 | 64.7 |
MS.gene63094.t1 | AT3G26922 | 27.007 | 274 | 170 | 7 | 17 | 285 | 5 | 253 | 2.92e-11 | 64.7 |
Find 112 sgRNAs with CRISPR-Local
Find 143 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGTAAACACTGCAGTCTTTC+TGG | 0.129894 | 8.1:-42909048 | MS.gene63094:intron |
AAACGAAGGATATATTAATT+TGG | 0.153932 | 8.1:-42908779 | MS.gene63094:CDS |
CCCCAAGCTGGAAACTTTGC+AGG | 0.229332 | 8.1:-42908911 | MS.gene63094:CDS |
GATTGGCCGGTTTCGAGCTC+TGG | 0.257085 | 8.1:+42908830 | None:intergenic |
GCTCCAACCTCCTTTCTCTT+AGG | 0.263650 | 8.1:-42909406 | MS.gene63094:intron |
GTCTCTCGGCACAGAAATTA+TGG | 0.288190 | 8.1:-42908968 | MS.gene63094:CDS |
ACCTGCAAAGTTTCCAGCTT+GGG | 0.309530 | 8.1:+42908910 | None:intergenic |
AACGAAGGATATATTAATTT+GGG | 0.327225 | 8.1:-42908778 | MS.gene63094:CDS |
CTCGCCGGTGGCGCCACCTC+TGG | 0.341008 | 8.1:-42909718 | MS.gene63094:CDS |
CTGACCTATGTTCACATAGA+AGG | 0.351633 | 8.1:-42908172 | MS.gene63094:CDS |
TATATTAATTTGGGCATTGT+AGG | 0.357147 | 8.1:-42908769 | MS.gene63094:CDS |
ATGTTTCAACTCAAATCTTC+TGG | 0.358687 | 8.1:-42908447 | MS.gene63094:CDS |
GAGATAGAGGTGTTGAAGTT+GGG | 0.360637 | 8.1:+42909481 | None:intergenic |
ACTAGGAGGTGGTCGAGAAC+AGG | 0.375934 | 8.1:+42908679 | None:intergenic |
AGAGATAGAGGTGTTGAAGT+TGG | 0.394213 | 8.1:+42909480 | None:intergenic |
GTAGACGGTAACAGTAGAAT+TGG | 0.397098 | 8.1:+42909678 | None:intergenic |
TTGGAAGGAAGGACATGATA+TGG | 0.420389 | 8.1:+42909774 | None:intergenic |
TGTAGGCAACTTTCACACTA+TGG | 0.425217 | 8.1:-42908752 | MS.gene63094:CDS |
AAATTACTTTCCTTCCTCTC+TGG | 0.429603 | 8.1:-42908937 | MS.gene63094:CDS |
CCTCTCTGGCTGCCCCAAGC+TGG | 0.444251 | 8.1:-42908923 | MS.gene63094:CDS |
AATTCAGGATAATTTAGAAC+AGG | 0.454737 | 8.1:+42908503 | None:intergenic |
CCTTCCAGAGGTGGCGCCAC+CGG | 0.463852 | 8.1:+42909714 | None:intergenic |
ACCATTGAGAACATGGCAAC+CGG | 0.465455 | 8.1:-42908230 | MS.gene63094:CDS |
CCGTAGATTTATAGCATCAT+GGG | 0.467450 | 8.1:+42908654 | None:intergenic |
TGCGGAAATTGCGGAGGTTG+AGG | 0.468343 | 8.1:+42909612 | None:intergenic |
CGGCCAATCATAATTTCACT+TGG | 0.470608 | 8.1:-42908816 | MS.gene63094:CDS |
CAATTGATGAAGAGGGAAGG+AGG | 0.470818 | 8.1:+42909428 | None:intergenic |
AGTCCAAGTGAAATTATGAT+TGG | 0.480791 | 8.1:+42908813 | None:intergenic |
TTATAGCATCATGGGGAACT+AGG | 0.481247 | 8.1:+42908662 | None:intergenic |
AATTGATGAAGAGGGAAGGA+GGG | 0.486231 | 8.1:+42909429 | None:intergenic |
AACCTGCAAAGTTTCCAGCT+TGG | 0.491460 | 8.1:+42908909 | None:intergenic |
GACCCAACTGTATCCTCATA+AGG | 0.492983 | 8.1:-42907974 | None:intergenic |
ATTGGCCGGTTTCGAGCTCT+GGG | 0.493701 | 8.1:+42908831 | None:intergenic |
ACCGTAGATTTATAGCATCA+TGG | 0.495398 | 8.1:+42908653 | None:intergenic |
CAATGTGAACATAGAGATAG+AGG | 0.499821 | 8.1:+42909468 | None:intergenic |
ATCTCTTCTGCTGATTTCTG+TGG | 0.500858 | 8.1:+42909860 | None:intergenic |
AAGATTAACAAATATATCAA+AGG | 0.513545 | 8.1:-42908023 | MS.gene63094:CDS |
TTCCTCCCAGAGCTCGAAAC+CGG | 0.515568 | 8.1:-42908836 | MS.gene63094:CDS |
TGAGAGGTTACCTAAGAGAA+AGG | 0.516975 | 8.1:+42909396 | None:intergenic |
ATATGGCACAGGAGTGTGTT+CGG | 0.519601 | 8.1:+42909791 | None:intergenic |
TACCTTATGAGGATACAGTT+GGG | 0.528201 | 8.1:+42907972 | None:intergenic |
TGAATGGAATTGAATGTAGA+CGG | 0.528341 | 8.1:+42909663 | None:intergenic |
CTTGGGGCAGCCAGAGAGGA+AGG | 0.529957 | 8.1:+42908927 | None:intergenic |
GGTTGGAGCAATTGATGAAG+AGG | 0.530052 | 8.1:+42909420 | None:intergenic |
TTCGAGCTCTGGGAGGAAGA+TGG | 0.530767 | 8.1:+42908841 | None:intergenic |
CGATGAGCCTCGTCTCTCGC+CGG | 0.533455 | 8.1:-42909733 | MS.gene63094:CDS |
GTTCACATAGAAGGGTATCA+AGG | 0.534998 | 8.1:-42908163 | MS.gene63094:CDS |
CGACAAATTCACTCTCAAAA+CGG | 0.535261 | 8.1:+42908704 | None:intergenic |
CAGTTGGGTCGAACTTAAGT+TGG | 0.538832 | 8.1:+42907987 | None:intergenic |
AGATTAACAAATATATCAAA+GGG | 0.542609 | 8.1:-42908022 | MS.gene63094:CDS |
CAAGTGAAATTATGATTGGC+CGG | 0.542813 | 8.1:+42908817 | None:intergenic |
CTTCTATGTGAACATAGGTC+AGG | 0.542971 | 8.1:+42908173 | None:intergenic |
TCCGGTTGCCATGTTCTCAA+TGG | 0.544353 | 8.1:+42908229 | None:intergenic |
CCCATGATGCTATAAATCTA+CGG | 0.544523 | 8.1:-42908654 | MS.gene63094:CDS |
TGATGAAGAGGGAAGGAGGG+AGG | 0.545199 | 8.1:+42909432 | None:intergenic |
CCGGTGGCGCCACCTCTGGA+AGG | 0.547084 | 8.1:-42909714 | MS.gene63094:CDS |
TCAGAAACTGTTGTTGACTC+CGG | 0.549273 | 8.1:+42908211 | None:intergenic |
CCAGCTTGGGGCAGCCAGAG+AGG | 0.557168 | 8.1:+42908923 | None:intergenic |
TGCCATGTTCTCAATGGTGG+TGG | 0.557408 | 8.1:+42908235 | None:intergenic |
TTACCTTATGAGGATACAGT+TGG | 0.557869 | 8.1:+42907971 | None:intergenic |
AACCACCACCATTGAGAACA+TGG | 0.560977 | 8.1:-42908237 | MS.gene63094:CDS |
GTTGGAGCAATTGATGAAGA+GGG | 0.561648 | 8.1:+42909421 | None:intergenic |
GTCCACACAGAAGTTCTAGT+TGG | 0.565981 | 8.1:+42909755 | None:intergenic |
GCATTCGTCACAAAGACTGC+AGG | 0.566927 | 8.1:+42908871 | None:intergenic |
GTGTTGAAGTTGGGGTCCGA+TGG | 0.567663 | 8.1:+42909490 | None:intergenic |
TATGAATGTTGCGGAAATTG+CGG | 0.578436 | 8.1:+42909603 | None:intergenic |
ATACCCTTCTATGTGAACAT+AGG | 0.580469 | 8.1:+42908168 | None:intergenic |
GTTGGGGTCCGATGGCATCA+AGG | 0.580557 | 8.1:+42909498 | None:intergenic |
AGATAGAGGTGTTGAAGTTG+GGG | 0.580903 | 8.1:+42909482 | None:intergenic |
GAGCAATTGATGAAGAGGGA+AGG | 0.585056 | 8.1:+42909425 | None:intergenic |
AGAAGATTTGAGTTGAAACA+TGG | 0.586977 | 8.1:+42908449 | None:intergenic |
TCGTGGATCCTTGATGCCAT+CGG | 0.587951 | 8.1:-42909506 | MS.gene63094:CDS |
CCTGCAAAGTTTCCAGCTTG+GGG | 0.588595 | 8.1:+42908911 | None:intergenic |
CTATGTGAACATAGGTCAGG+TGG | 0.588925 | 8.1:+42908176 | None:intergenic |
TGACCTATGTTCACATAGAA+GGG | 0.590318 | 8.1:-42908171 | MS.gene63094:CDS |
AGAGACAACATCTTCAGTGA+TGG | 0.590452 | 8.1:+42908985 | None:intergenic |
GGAAGGACATGATATGGCAC+AGG | 0.590863 | 8.1:+42909780 | None:intergenic |
TTACCTAAGAGAAAGGAGGT+TGG | 0.592640 | 8.1:+42909403 | None:intergenic |
ACACAGAAGTTCTAGTTGGA+AGG | 0.595322 | 8.1:+42909759 | None:intergenic |
CTAGGAGGTGGTCGAGAACA+GGG | 0.599798 | 8.1:+42908680 | None:intergenic |
GATTTGAGTTGAAACATGGA+AGG | 0.600986 | 8.1:+42908453 | None:intergenic |
AGAAGTTCTAGTTGGAAGGA+AGG | 0.601385 | 8.1:+42909763 | None:intergenic |
TGAGCCTCGTCTCTCGCCGG+TGG | 0.605450 | 8.1:-42909730 | MS.gene63094:CDS |
CATCATGGGGAACTAGGAGG+TGG | 0.608053 | 8.1:+42908668 | None:intergenic |
TCACTGAAGATGTTGTCTCT+CGG | 0.611749 | 8.1:-42908982 | MS.gene63094:CDS |
GGCGCCACCGGCGAGAGACG+AGG | 0.612718 | 8.1:+42909726 | None:intergenic |
TTGTCCACTGTGTTGAATCG+TGG | 0.624204 | 8.1:-42909523 | MS.gene63094:CDS |
CTTGCAGATCCTTCCAGAGG+TGG | 0.626464 | 8.1:+42909705 | None:intergenic |
GATGGAACTTATGAATGTTG+CGG | 0.629837 | 8.1:+42909594 | None:intergenic |
GATGGCGGAGTCAAGAAGCA+TGG | 0.630071 | 8.1:-42909885 | MS.gene63094:CDS |
GTTGCGTCATTCGACATCAA+AGG | 0.630198 | 8.1:-42908632 | MS.gene63094:intron |
GATGAAAGGTGAGATCGAGA+TGG | 0.636927 | 8.1:+42909576 | None:intergenic |
GAGATAATAAACGATGGCGA+AGG | 0.642480 | 8.1:-42909842 | MS.gene63094:CDS |
TATGTGAACATAGGTCAGGT+GGG | 0.643030 | 8.1:+42908177 | None:intergenic |
GGTTGCCATGTTCTCAATGG+TGG | 0.646260 | 8.1:+42908232 | None:intergenic |
GGCCGGTTTCGAGCTCTGGG+AGG | 0.664051 | 8.1:+42908834 | None:intergenic |
ACTTACTTCGATATAAACGA+AGG | 0.665297 | 8.1:-42908793 | MS.gene63094:CDS |
TCTTTCTGGTAAGATCAGCA+TGG | 0.667331 | 8.1:-42909034 | MS.gene63094:CDS |
TTATGAGAACTTGAAGCATG+CGG | 0.670506 | 8.1:+42908405 | None:intergenic |
AGGCAACTTTCACACTATGG+AGG | 0.670571 | 8.1:-42908749 | MS.gene63094:CDS |
TGCGGCATTTCTCAAGCACG+TGG | 0.671395 | 8.1:+42908423 | None:intergenic |
CGTAGATTTATAGCATCATG+GGG | 0.673823 | 8.1:+42908655 | None:intergenic |
TCTCATAATTCAGAGCAACA+AGG | 0.677248 | 8.1:-42908390 | MS.gene63094:intron |
GCAGAAGAGATAATAAACGA+TGG | 0.678890 | 8.1:-42909848 | MS.gene63094:CDS |
TAGCATCATGGGGAACTAGG+AGG | 0.681420 | 8.1:+42908665 | None:intergenic |
GAGGTTACCTAAGAGAAAGG+AGG | 0.687048 | 8.1:+42909399 | None:intergenic |
TTCCAACTAGAACTTCTGTG+TGG | 0.691746 | 8.1:-42909757 | MS.gene63094:CDS |
AGACTTGCAGATCCTTCCAG+AGG | 0.695151 | 8.1:+42909702 | None:intergenic |
TTCTGGTAAGATCAGCATGG+AGG | 0.697387 | 8.1:-42909031 | MS.gene63094:CDS |
GAATGTTGCGGAAATTGCGG+AGG | 0.710599 | 8.1:+42909606 | None:intergenic |
TTTAATGGACAAAACAGACA+AGG | 0.711577 | 8.1:-42908059 | MS.gene63094:CDS |
GGATCCACGATTCAACACAG+TGG | 0.768479 | 8.1:+42909519 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATAATATTAGTAATTTGA+AGG | + | chr8.1:42908721-42908740 | None:intergenic | 10.0% |
!!! | CTATATTTGTTATAAAAAAA+AGG | + | chr8.1:42908766-42908785 | None:intergenic | 10.0% |
!! | AAGATTAACAAATATATCAA+AGG | - | chr8.1:42909837-42909856 | MS.gene63094:CDS | 15.0% |
!! | AGATTAACAAATATATCAAA+GGG | - | chr8.1:42909838-42909857 | MS.gene63094:CDS | 15.0% |
!! | CATAATATATAGTAATAAGA+AGG | + | chr8.1:42908512-42908531 | None:intergenic | 15.0% |
!!! | AATAATAGAAACTTTTTGAA+TGG | + | chr8.1:42908216-42908235 | None:intergenic | 15.0% |
!!! | TATTTTTGTTGATAGTTTAA+TGG | - | chr8.1:42909786-42909805 | MS.gene63094:CDS | 15.0% |
!! | AAACGAAGGATATATTAATT+TGG | - | chr8.1:42909081-42909100 | MS.gene63094:intron | 20.0% |
!! | AACGAAGGATATATTAATTT+GGG | - | chr8.1:42909082-42909101 | MS.gene63094:intron | 20.0% |
!!! | ACCAATATATTTTTGAGTAA+TGG | - | chr8.1:42909572-42909591 | MS.gene63094:CDS | 20.0% |
! | GAAATAAGAGTTGTCAAAAA+CGG | + | chr8.1:42908313-42908332 | None:intergenic | 25.0% |
! | GCCATTACTCAAAAATATAT+TGG | + | chr8.1:42909576-42909595 | None:intergenic | 25.0% |
! | TGAGCATAAAAACAAATGAT+TGG | + | chr8.1:42908582-42908601 | None:intergenic | 25.0% |
!! | AATTCAGGATAATTTAGAAC+AGG | + | chr8.1:42909360-42909379 | None:intergenic | 25.0% |
!! | TATATTAATTTGGGCATTGT+AGG | - | chr8.1:42909091-42909110 | MS.gene63094:intron | 25.0% |
!!! | ATTGGTTTTGTCATTCAAAA+AGG | - | chr8.1:42908667-42908686 | MS.gene63094:CDS | 25.0% |
!!! | GCTGAATATATTTTGAAGAA+CGG | - | chr8.1:42909742-42909761 | MS.gene63094:CDS | 25.0% |
!!! | TATATTTTTGAGTAATGGCA+CGG | - | chr8.1:42909577-42909596 | MS.gene63094:CDS | 25.0% |
AAAATTGATACTGTGATGAG+AGG | + | chr8.1:42908483-42908502 | None:intergenic | 30.0% | |
ACATGCATGTATATATTGAC+AGG | + | chr8.1:42909534-42909553 | None:intergenic | 30.0% | |
ACTTACTTCGATATAAACGA+AGG | - | chr8.1:42909067-42909086 | MS.gene63094:intron | 30.0% | |
AGTCCAAGTGAAATTATGAT+TGG | + | chr8.1:42909050-42909069 | None:intergenic | 30.0% | |
AGTTTAATCCAAACAATCTC+TGG | - | chr8.1:42909508-42909527 | MS.gene63094:CDS | 30.0% | |
ATAGCAATGTTGTGTCAATT+AGG | - | chr8.1:42908620-42908639 | MS.gene63094:intron | 30.0% | |
ATGTTTCAACTCAAATCTTC+TGG | - | chr8.1:42909413-42909432 | MS.gene63094:CDS | 30.0% | |
TGAATGGAATTGAATGTAGA+CGG | + | chr8.1:42908200-42908219 | None:intergenic | 30.0% | |
TGTCATTCAAAAAGGATTAG+CGG | - | chr8.1:42908675-42908694 | MS.gene63094:CDS | 30.0% | |
! | TTTAATGGACAAAACAGACA+AGG | - | chr8.1:42909801-42909820 | MS.gene63094:CDS | 30.0% |
! | TTTTATGCTCAAACCGAAAA+GGG | - | chr8.1:42908591-42908610 | MS.gene63094:intron | 30.0% |
! | TTTTGTAAATCGCGAAATTC+AGG | + | chr8.1:42909375-42909394 | None:intergenic | 30.0% |
! | TTTTTATGCTCAAACCGAAA+AGG | - | chr8.1:42908590-42908609 | MS.gene63094:intron | 30.0% |
!! | AAGGTGAGGTTTTACTTTTA+TGG | - | chr8.1:42909247-42909266 | MS.gene63094:intron | 30.0% |
!! | AGAAGATTTGAGTTGAAACA+TGG | + | chr8.1:42909414-42909433 | None:intergenic | 30.0% |
AAATTACTTTCCTTCCTCTC+TGG | - | chr8.1:42908923-42908942 | MS.gene63094:CDS | 35.0% | |
ACCGTAGATTTATAGCATCA+TGG | + | chr8.1:42909210-42909229 | None:intergenic | 35.0% | |
ATACCCTTCTATGTGAACAT+AGG | + | chr8.1:42909695-42909714 | None:intergenic | 35.0% | |
CAAGTGAAATTATGATTGGC+CGG | + | chr8.1:42909046-42909065 | None:intergenic | 35.0% | |
CAATGTGAACATAGAGATAG+AGG | + | chr8.1:42908395-42908414 | None:intergenic | 35.0% | |
CCCATGATGCTATAAATCTA+CGG | - | chr8.1:42909206-42909225 | MS.gene63094:intron | 35.0% | |
CCGTAGATTTATAGCATCAT+GGG | + | chr8.1:42909209-42909228 | None:intergenic | 35.0% | |
CGACAAATTCACTCTCAAAA+CGG | + | chr8.1:42909159-42909178 | None:intergenic | 35.0% | |
CGTAGATTTATAGCATCATG+GGG | + | chr8.1:42909208-42909227 | None:intergenic | 35.0% | |
GATGGAACTTATGAATGTTG+CGG | + | chr8.1:42908269-42908288 | None:intergenic | 35.0% | |
GCAGAAGAGATAATAAACGA+TGG | - | chr8.1:42908012-42908031 | MS.gene63094:CDS | 35.0% | |
TATGAATGTTGCGGAAATTG+CGG | + | chr8.1:42908260-42908279 | None:intergenic | 35.0% | |
TCTCATAATTCAGAGCAACA+AGG | - | chr8.1:42909470-42909489 | MS.gene63094:CDS | 35.0% | |
TGACCTATGTTCACATAGAA+GGG | - | chr8.1:42909689-42909708 | MS.gene63094:CDS | 35.0% | |
TTATGAGAACTTGAAGCATG+CGG | + | chr8.1:42909458-42909477 | None:intergenic | 35.0% | |
!! | GATTTGAGTTGAAACATGGA+AGG | + | chr8.1:42909410-42909429 | None:intergenic | 35.0% |
!! | TTGCTATTCATGACCCTTTT+CGG | + | chr8.1:42908607-42908626 | None:intergenic | 35.0% |
AATTGATGAAGAGGGAAGGA+GGG | + | chr8.1:42908434-42908453 | None:intergenic | 40.0% | |
AGAGACAACATCTTCAGTGA+TGG | + | chr8.1:42908878-42908897 | None:intergenic | 40.0% | |
AGTGTTTACCAAAGACTGAC+AGG | + | chr8.1:42908802-42908821 | None:intergenic | 40.0% | |
CGGCCAATCATAATTTCACT+TGG | - | chr8.1:42909044-42909063 | MS.gene63094:intron | 40.0% | |
CTGACCTATGTTCACATAGA+AGG | - | chr8.1:42909688-42909707 | MS.gene63094:CDS | 40.0% | |
CTTCTATGTGAACATAGGTC+AGG | + | chr8.1:42909690-42909709 | None:intergenic | 40.0% | |
CTTTCGACGGTCTATTTAAG+AGG | - | chr8.1:42908644-42908663 | MS.gene63094:CDS | 40.0% | |
GACGGTCTATTTAAGAGGAT+TGG | - | chr8.1:42908649-42908668 | MS.gene63094:CDS | 40.0% | |
GAGATAATAAACGATGGCGA+AGG | - | chr8.1:42908018-42908037 | MS.gene63094:CDS | 40.0% | |
GTAGACGGTAACAGTAGAAT+TGG | + | chr8.1:42908185-42908204 | None:intergenic | 40.0% | |
GTCAAAAACGGAACGATGAA+AGG | + | chr8.1:42908301-42908320 | None:intergenic | 40.0% | |
GTGTCAATTAGGTCTTTCGA+CGG | - | chr8.1:42908631-42908650 | MS.gene63094:intron | 40.0% | |
GTTGGAGCAATTGATGAAGA+GGG | + | chr8.1:42908442-42908461 | None:intergenic | 40.0% | |
TACATTGACCTGTCAGTCTT+TGG | - | chr8.1:42908791-42908810 | MS.gene63094:CDS | 40.0% | |
TATGTGAACATAGGTCAGGT+GGG | + | chr8.1:42909686-42909705 | None:intergenic | 40.0% | |
TCACTGAAGATGTTGTCTCT+CGG | - | chr8.1:42908878-42908897 | MS.gene63094:CDS | 40.0% | |
TGAGAGGTTACCTAAGAGAA+AGG | + | chr8.1:42908467-42908486 | None:intergenic | 40.0% | |
TGTAGGCAACTTTCACACTA+TGG | - | chr8.1:42909108-42909127 | MS.gene63094:intron | 40.0% | |
TTACCTAAGAGAAAGGAGGT+TGG | + | chr8.1:42908460-42908479 | None:intergenic | 40.0% | |
TTATAGCATCATGGGGAACT+AGG | + | chr8.1:42909201-42909220 | None:intergenic | 40.0% | |
TTCCAACTAGAACTTCTGTG+TGG | - | chr8.1:42908103-42908122 | MS.gene63094:CDS | 40.0% | |
TTGGAAGGAAGGACATGATA+TGG | + | chr8.1:42908089-42908108 | None:intergenic | 40.0% | |
TTTCCTTTATTGCTGGTAGG+AGG | - | chr8.1:42909600-42909619 | MS.gene63094:CDS | 40.0% | |
! | ACACAGAAGTTCTAGTTGGA+AGG | + | chr8.1:42908104-42908123 | None:intergenic | 40.0% |
! | AGAAGTTCTAGTTGGAAGGA+AGG | + | chr8.1:42908100-42908119 | None:intergenic | 40.0% |
! | TCTTTCTGGTAAGATCAGCA+TGG | - | chr8.1:42908826-42908845 | MS.gene63094:CDS | 40.0% |
!! | AGAGATAGAGGTGTTGAAGT+TGG | + | chr8.1:42908383-42908402 | None:intergenic | 40.0% |
!! | AGATAGAGGTGTTGAAGTTG+GGG | + | chr8.1:42908381-42908400 | None:intergenic | 40.0% |
!! | ATCTCTTCTGCTGATTTCTG+TGG | + | chr8.1:42908003-42908022 | None:intergenic | 40.0% |
!! | GAGATAGAGGTGTTGAAGTT+GGG | + | chr8.1:42908382-42908401 | None:intergenic | 40.0% |
!! | GTTCACATAGAAGGGTATCA+AGG | - | chr8.1:42909697-42909716 | MS.gene63094:CDS | 40.0% |
!! | TCAGAAACTGTTGTTGACTC+CGG | + | chr8.1:42909652-42909671 | None:intergenic | 40.0% |
!!! | TGAAGAACGGACTTGTTTTG+AGG | - | chr8.1:42909755-42909774 | MS.gene63094:CDS | 40.0% |
AACCACCACCATTGAGAACA+TGG | - | chr8.1:42909623-42909642 | MS.gene63094:CDS | 45.0% | |
AACCTGCAAAGTTTCCAGCT+TGG | + | chr8.1:42908954-42908973 | None:intergenic | 45.0% | |
ACCATTGAGAACATGGCAAC+CGG | - | chr8.1:42909630-42909649 | MS.gene63094:CDS | 45.0% | |
ACCTGCAAAGTTTCCAGCTT+GGG | + | chr8.1:42908953-42908972 | None:intergenic | 45.0% | |
AGGCAACTTTCACACTATGG+AGG | - | chr8.1:42909111-42909130 | MS.gene63094:intron | 45.0% | |
CAATTGATGAAGAGGGAAGG+AGG | + | chr8.1:42908435-42908454 | None:intergenic | 45.0% | |
CAGTTGGGTCGAACTTAAGT+TGG | + | chr8.1:42909876-42909895 | None:intergenic | 45.0% | |
CGGTTTCCTTTATTGCTGGT+AGG | - | chr8.1:42909597-42909616 | MS.gene63094:CDS | 45.0% | |
CTATGTGAACATAGGTCAGG+TGG | + | chr8.1:42909687-42909706 | None:intergenic | 45.0% | |
GAGCAATTGATGAAGAGGGA+AGG | + | chr8.1:42908438-42908457 | None:intergenic | 45.0% | |
GAGGTTACCTAAGAGAAAGG+AGG | + | chr8.1:42908464-42908483 | None:intergenic | 45.0% | |
GATGAAAGGTGAGATCGAGA+TGG | + | chr8.1:42908287-42908306 | None:intergenic | 45.0% | |
GGTAAACACTGCAGTCTTTC+TGG | - | chr8.1:42908812-42908831 | MS.gene63094:CDS | 45.0% | |
GGTTGGAGCAATTGATGAAG+AGG | + | chr8.1:42908443-42908462 | None:intergenic | 45.0% | |
GTCATTCGACATCAAAGGTG+AGG | - | chr8.1:42909233-42909252 | MS.gene63094:intron | 45.0% | |
GTCTCTCGGCACAGAAATTA+TGG | - | chr8.1:42908892-42908911 | MS.gene63094:CDS | 45.0% | |
GTTCCTCCTACCAGCAATAA+AGG | + | chr8.1:42909606-42909625 | None:intergenic | 45.0% | |
GTTGCGTCATTCGACATCAA+AGG | - | chr8.1:42909228-42909247 | MS.gene63094:intron | 45.0% | |
TTCTGGTAAGATCAGCATGG+AGG | - | chr8.1:42908829-42908848 | MS.gene63094:CDS | 45.0% | |
TTGACAGGCCAGAGATTGTT+TGG | + | chr8.1:42909519-42909538 | None:intergenic | 45.0% | |
TTGTCCACTGTGTTGAATCG+TGG | - | chr8.1:42908337-42908356 | MS.gene63094:intron | 45.0% | |
! | ATATGGCACAGGAGTGTGTT+CGG | + | chr8.1:42908072-42908091 | None:intergenic | 45.0% |
! | GTCCACACAGAAGTTCTAGT+TGG | + | chr8.1:42908108-42908127 | None:intergenic | 45.0% |
AGACTTGCAGATCCTTCCAG+AGG | + | chr8.1:42908161-42908180 | None:intergenic | 50.0% | |
CCTGCAAAGTTTCCAGCTTG+GGG | + | chr8.1:42908952-42908971 | None:intergenic | 50.0% | |
GAATGTTGCGGAAATTGCGG+AGG | + | chr8.1:42908257-42908276 | None:intergenic | 50.0% | |
GCATTCGTCACAAAGACTGC+AGG | + | chr8.1:42908992-42909011 | None:intergenic | 50.0% | |
GCTCCAACCTCCTTTCTCTT+AGG | - | chr8.1:42908454-42908473 | MS.gene63094:CDS | 50.0% | |
GGAAGGACATGATATGGCAC+AGG | + | chr8.1:42908083-42908102 | None:intergenic | 50.0% | |
GGATCCACGATTCAACACAG+TGG | + | chr8.1:42908344-42908363 | None:intergenic | 50.0% | |
GGCACGGTTTCCTTTATTGC+TGG | - | chr8.1:42909593-42909612 | MS.gene63094:CDS | 50.0% | |
GGTTGCCATGTTCTCAATGG+TGG | + | chr8.1:42909631-42909650 | None:intergenic | 50.0% | |
TAGCATCATGGGGAACTAGG+AGG | + | chr8.1:42909198-42909217 | None:intergenic | 50.0% | |
TCCGGTTGCCATGTTCTCAA+TGG | + | chr8.1:42909634-42909653 | None:intergenic | 50.0% | |
TCGTGGATCCTTGATGCCAT+CGG | - | chr8.1:42908354-42908373 | MS.gene63094:intron | 50.0% | |
TGCCATGTTCTCAATGGTGG+TGG | + | chr8.1:42909628-42909647 | None:intergenic | 50.0% | |
ACTAGGAGGTGGTCGAGAAC+AGG | + | chr8.1:42909184-42909203 | None:intergenic | 55.0% | |
CATCATGGGGAACTAGGAGG+TGG | + | chr8.1:42909195-42909214 | None:intergenic | 55.0% | |
CCCCAAGCTGGAAACTTTGC+AGG | - | chr8.1:42908949-42908968 | MS.gene63094:CDS | 55.0% | |
CTAGGAGGTGGTCGAGAACA+GGG | + | chr8.1:42909183-42909202 | None:intergenic | 55.0% | |
CTTGCAGATCCTTCCAGAGG+TGG | + | chr8.1:42908158-42908177 | None:intergenic | 55.0% | |
GTGTTGAAGTTGGGGTCCGA+TGG | + | chr8.1:42908373-42908392 | None:intergenic | 55.0% | |
TGATGAAGAGGGAAGGAGGG+AGG | + | chr8.1:42908431-42908450 | None:intergenic | 55.0% | |
TGCGGAAATTGCGGAGGTTG+AGG | + | chr8.1:42908251-42908270 | None:intergenic | 55.0% | |
TGCGGCATTTCTCAAGCACG+TGG | + | chr8.1:42909440-42909459 | None:intergenic | 55.0% | |
TTCCTCCCAGAGCTCGAAAC+CGG | - | chr8.1:42909024-42909043 | MS.gene63094:CDS | 55.0% | |
! | ATTGGCCGGTTTCGAGCTCT+GGG | + | chr8.1:42909032-42909051 | None:intergenic | 55.0% |
!! | TTCGAGCTCTGGGAGGAAGA+TGG | + | chr8.1:42909022-42909041 | None:intergenic | 55.0% |
GTTGGGGTCCGATGGCATCA+AGG | + | chr8.1:42908365-42908384 | None:intergenic | 60.0% | |
! | GATTGGCCGGTTTCGAGCTC+TGG | + | chr8.1:42909033-42909052 | None:intergenic | 60.0% |
CGATGAGCCTCGTCTCTCGC+CGG | - | chr8.1:42908127-42908146 | MS.gene63094:CDS | 65.0% | |
CTTGGGGCAGCCAGAGAGGA+AGG | + | chr8.1:42908936-42908955 | None:intergenic | 65.0% | |
CCAGCTTGGGGCAGCCAGAG+AGG | + | chr8.1:42908940-42908959 | None:intergenic | 70.0% | |
CCTCTCTGGCTGCCCCAAGC+TGG | - | chr8.1:42908937-42908956 | MS.gene63094:CDS | 70.0% | |
CCTTCCAGAGGTGGCGCCAC+CGG | + | chr8.1:42908149-42908168 | None:intergenic | 70.0% | |
TGAGCCTCGTCTCTCGCCGG+TGG | - | chr8.1:42908130-42908149 | MS.gene63094:CDS | 70.0% | |
!! | GGCCGGTTTCGAGCTCTGGG+AGG | + | chr8.1:42909029-42909048 | None:intergenic | 70.0% |
CCGGTGGCGCCACCTCTGGA+AGG | - | chr8.1:42908146-42908165 | MS.gene63094:CDS | 75.0% | |
! | CTCGCCGGTGGCGCCACCTC+TGG | - | chr8.1:42908142-42908161 | MS.gene63094:CDS | 80.0% |
! | GGCGCCACCGGCGAGAGACG+AGG | + | chr8.1:42908137-42908156 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 42907976 | 42909906 | 42907976 | ID=MS.gene63094 |
chr8.1 | mRNA | 42907976 | 42909906 | 42907976 | ID=MS.gene63094.t1;Parent=MS.gene63094 |
chr8.1 | exon | 42909407 | 42909906 | 42909407 | ID=MS.gene63094.t1.exon1;Parent=MS.gene63094.t1 |
chr8.1 | CDS | 42909407 | 42909906 | 42909407 | ID=cds.MS.gene63094.t1;Parent=MS.gene63094.t1 |
chr8.1 | exon | 42908633 | 42909056 | 42908633 | ID=MS.gene63094.t1.exon2;Parent=MS.gene63094.t1 |
chr8.1 | CDS | 42908633 | 42909056 | 42908633 | ID=cds.MS.gene63094.t1;Parent=MS.gene63094.t1 |
chr8.1 | exon | 42908391 | 42908540 | 42908391 | ID=MS.gene63094.t1.exon3;Parent=MS.gene63094.t1 |
chr8.1 | CDS | 42908391 | 42908540 | 42908391 | ID=cds.MS.gene63094.t1;Parent=MS.gene63094.t1 |
chr8.1 | exon | 42907976 | 42908263 | 42907976 | ID=MS.gene63094.t1.exon4;Parent=MS.gene63094.t1 |
chr8.1 | CDS | 42907976 | 42908263 | 42907976 | ID=cds.MS.gene63094.t1;Parent=MS.gene63094.t1 |
Gene Sequence |
Protein sequence |