Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63213.t1 | XP_013445395.1 | 56.1 | 456 | 165 | 4 | 11 | 431 | 5 | 460 | 1.30E-130 | 476.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63213.t1 | Q9FZ52 | 22.7 | 485 | 263 | 16 | 12 | 427 | 8 | 449 | 9.3e-16 | 86.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63213.t1 | A0A392M1I8 | 57.8 | 460 | 156 | 6 | 7 | 432 | 9 | 464 | 3.2e-134 | 488.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63213.t1 | MTR_8g058965 | 56.114 | 458 | 166 | 4 | 9 | 431 | 3 | 460 | 2.63e-157 | 452 |
MS.gene63213.t1 | MTR_8g469020 | 53.744 | 454 | 168 | 6 | 18 | 432 | 6 | 456 | 3.16e-154 | 444 |
MS.gene63213.t1 | MTR_8g070950 | 53.348 | 463 | 161 | 11 | 1 | 432 | 1 | 439 | 7.54e-142 | 412 |
MS.gene63213.t1 | MTR_8g062010 | 53.075 | 439 | 171 | 8 | 17 | 431 | 7 | 434 | 3.09e-134 | 393 |
MS.gene63213.t1 | MTR_8g062310 | 53.009 | 432 | 162 | 10 | 19 | 432 | 25 | 433 | 1.63e-133 | 391 |
MS.gene63213.t1 | MTR_4g050250 | 52.732 | 421 | 150 | 8 | 1 | 373 | 1 | 420 | 4.12e-131 | 384 |
MS.gene63213.t1 | MTR_8g062300 | 47.773 | 494 | 182 | 15 | 1 | 431 | 1 | 481 | 8.01e-123 | 365 |
MS.gene63213.t1 | MTR_8g062080 | 48.380 | 463 | 193 | 13 | 1 | 431 | 1 | 449 | 4.06e-121 | 360 |
MS.gene63213.t1 | MTR_2g083840 | 42.576 | 458 | 231 | 9 | 1 | 427 | 1 | 457 | 4.02e-90 | 281 |
MS.gene63213.t1 | MTR_8g062270 | 39.286 | 448 | 228 | 9 | 16 | 426 | 13 | 453 | 2.87e-84 | 265 |
MS.gene63213.t1 | MTR_8g468810 | 39.574 | 470 | 234 | 14 | 1 | 427 | 1 | 463 | 5.54e-83 | 262 |
MS.gene63213.t1 | MTR_8g014260 | 39.301 | 458 | 240 | 10 | 1 | 427 | 1 | 451 | 2.92e-80 | 255 |
MS.gene63213.t1 | MTR_8g058970 | 38.750 | 480 | 238 | 14 | 1 | 427 | 1 | 477 | 4.17e-78 | 250 |
MS.gene63213.t1 | MTR_8g467800 | 37.527 | 469 | 242 | 11 | 2 | 432 | 3 | 458 | 1.79e-76 | 245 |
MS.gene63213.t1 | MTR_8g467790 | 41.842 | 380 | 162 | 13 | 19 | 372 | 148 | 494 | 4.76e-73 | 238 |
MS.gene63213.t1 | MTR_8g468840 | 38.952 | 439 | 232 | 9 | 19 | 425 | 14 | 448 | 3.72e-70 | 229 |
MS.gene63213.t1 | MTR_5g092960 | 37.748 | 453 | 237 | 11 | 14 | 426 | 14 | 461 | 5.85e-70 | 228 |
MS.gene63213.t1 | MTR_4g032730 | 35.897 | 468 | 244 | 11 | 11 | 426 | 3 | 466 | 9.73e-69 | 226 |
MS.gene63213.t1 | MTR_8g468760 | 36.842 | 456 | 208 | 12 | 12 | 426 | 2 | 418 | 3.86e-61 | 204 |
MS.gene63213.t1 | MTR_2g086020 | 71.233 | 146 | 42 | 0 | 287 | 432 | 175 | 320 | 8.94e-61 | 200 |
MS.gene63213.t1 | MTR_2g086020 | 47.059 | 119 | 49 | 3 | 46 | 159 | 3 | 112 | 3.26e-19 | 88.6 |
MS.gene63213.t1 | MTR_8g077460 | 37.150 | 428 | 202 | 14 | 12 | 427 | 3 | 375 | 2.38e-60 | 201 |
MS.gene63213.t1 | MTR_8g468810 | 38.624 | 378 | 184 | 13 | 1 | 337 | 1 | 371 | 1.92e-56 | 191 |
MS.gene63213.t1 | MTR_8g445780 | 36.658 | 401 | 211 | 12 | 7 | 380 | 6 | 390 | 2.68e-55 | 188 |
MS.gene63213.t1 | MTR_8g014160 | 34.459 | 444 | 197 | 14 | 19 | 427 | 41 | 425 | 8.44e-55 | 188 |
MS.gene63213.t1 | MTR_8g468810 | 39.344 | 305 | 145 | 10 | 1 | 271 | 1 | 299 | 7.04e-48 | 167 |
MS.gene63213.t1 | MTR_8g468810 | 39.344 | 305 | 145 | 10 | 1 | 271 | 1 | 299 | 9.18e-48 | 166 |
MS.gene63213.t1 | MTR_8g468810 | 39.344 | 305 | 145 | 10 | 1 | 271 | 1 | 299 | 1.24e-47 | 167 |
MS.gene63213.t1 | MTR_5g092960 | 35.695 | 367 | 197 | 10 | 3 | 332 | 2 | 366 | 3.44e-44 | 159 |
MS.gene63213.t1 | MTR_8g014210 | 41.949 | 236 | 124 | 6 | 200 | 427 | 1 | 231 | 6.36e-41 | 145 |
MS.gene63213.t1 | MTR_4g024710 | 37.544 | 285 | 154 | 7 | 157 | 427 | 73 | 347 | 1.02e-40 | 148 |
MS.gene63213.t1 | MTR_8g467800 | 35.647 | 317 | 163 | 8 | 2 | 287 | 3 | 309 | 3.30e-36 | 136 |
MS.gene63213.t1 | MTR_5g021550 | 45.732 | 164 | 82 | 4 | 1 | 159 | 1 | 162 | 3.07e-35 | 128 |
MS.gene63213.t1 | MTR_1g041245 | 27.842 | 431 | 236 | 15 | 18 | 427 | 10 | 386 | 3.59e-32 | 126 |
MS.gene63213.t1 | MTR_4g024745 | 35.878 | 262 | 156 | 7 | 157 | 410 | 27 | 284 | 3.24e-29 | 115 |
MS.gene63213.t1 | MTR_8g014290 | 44.079 | 152 | 74 | 4 | 19 | 160 | 10 | 160 | 5.95e-28 | 108 |
MS.gene63213.t1 | MTR_7g098510 | 26.531 | 441 | 260 | 14 | 1 | 427 | 1 | 391 | 2.80e-25 | 107 |
MS.gene63213.t1 | MTR_4g024720 | 42.222 | 180 | 79 | 7 | 1 | 159 | 1 | 176 | 6.19e-25 | 102 |
MS.gene63213.t1 | MTR_3g099800 | 51.456 | 103 | 49 | 1 | 323 | 424 | 3 | 105 | 6.77e-25 | 98.6 |
MS.gene63213.t1 | MTR_7g056433 | 26.047 | 430 | 253 | 15 | 15 | 427 | 8 | 389 | 7.61e-23 | 100 |
MS.gene63213.t1 | MTR_7g098570 | 25.806 | 434 | 263 | 12 | 1 | 422 | 2 | 388 | 1.57e-22 | 100 |
MS.gene63213.t1 | MTR_7g115270 | 25.513 | 439 | 259 | 14 | 11 | 424 | 4 | 399 | 2.03e-22 | 99.0 |
MS.gene63213.t1 | MTR_7g033915 | 27.778 | 432 | 214 | 17 | 17 | 426 | 9 | 364 | 1.87e-21 | 95.5 |
MS.gene63213.t1 | MTR_7g098480 | 26.818 | 440 | 256 | 14 | 1 | 426 | 1 | 388 | 1.14e-20 | 94.4 |
MS.gene63213.t1 | MTR_7g026500 | 26.437 | 435 | 251 | 15 | 13 | 426 | 8 | 394 | 1.82e-20 | 93.2 |
MS.gene63213.t1 | MTR_7g056430 | 26.214 | 412 | 230 | 14 | 19 | 419 | 9 | 357 | 9.73e-20 | 92.8 |
MS.gene63213.t1 | MTR_7g056420 | 26.214 | 412 | 230 | 14 | 19 | 419 | 9 | 357 | 1.08e-19 | 92.4 |
MS.gene63213.t1 | MTR_5g073420 | 27.612 | 402 | 211 | 17 | 17 | 399 | 9 | 349 | 2.50e-18 | 86.7 |
MS.gene63213.t1 | MTR_8g014230 | 48.235 | 85 | 42 | 2 | 337 | 421 | 17 | 99 | 3.62e-18 | 80.1 |
MS.gene63213.t1 | MTR_6g040270 | 28.571 | 427 | 224 | 19 | 21 | 424 | 10 | 378 | 5.64e-18 | 85.5 |
MS.gene63213.t1 | MTR_3g108560 | 28.082 | 438 | 226 | 15 | 12 | 426 | 17 | 388 | 1.04e-17 | 84.7 |
MS.gene63213.t1 | MTR_6g022500 | 24.045 | 445 | 247 | 16 | 12 | 427 | 94 | 476 | 2.89e-17 | 84.0 |
MS.gene63213.t1 | MTR_5g084070 | 23.884 | 448 | 285 | 14 | 7 | 422 | 3 | 426 | 4.77e-17 | 83.2 |
MS.gene63213.t1 | MTR_1g085120 | 24.362 | 431 | 253 | 14 | 19 | 427 | 92 | 471 | 1.87e-16 | 81.6 |
MS.gene63213.t1 | MTR_1g085120 | 24.362 | 431 | 253 | 14 | 19 | 427 | 167 | 546 | 2.10e-16 | 81.6 |
MS.gene63213.t1 | MTR_7g055943 | 24.661 | 442 | 248 | 18 | 15 | 427 | 36 | 421 | 2.84e-15 | 77.8 |
MS.gene63213.t1 | MTR_4g024770 | 53.968 | 63 | 27 | 1 | 1 | 63 | 8 | 68 | 2.90e-15 | 70.9 |
MS.gene63213.t1 | MTR_7g034110 | 35.915 | 142 | 70 | 5 | 19 | 153 | 11 | 138 | 7.32e-15 | 75.9 |
MS.gene63213.t1 | MTR_2g082880 | 27.404 | 416 | 250 | 18 | 16 | 397 | 7 | 404 | 9.85e-15 | 76.3 |
MS.gene63213.t1 | MTR_2g082800 | 32.237 | 152 | 94 | 4 | 5 | 156 | 13 | 155 | 2.78e-14 | 74.7 |
MS.gene63213.t1 | MTR_4g092430 | 33.974 | 156 | 88 | 6 | 7 | 159 | 29 | 172 | 3.00e-14 | 74.7 |
MS.gene63213.t1 | MTR_4g092430 | 33.974 | 156 | 88 | 6 | 7 | 159 | 29 | 172 | 3.13e-14 | 74.7 |
MS.gene63213.t1 | MTR_2g082850 | 34.884 | 129 | 78 | 3 | 6 | 131 | 9 | 134 | 3.63e-14 | 73.9 |
MS.gene63213.t1 | MTR_7g032380 | 34.965 | 143 | 81 | 5 | 19 | 159 | 11 | 143 | 4.92e-14 | 73.6 |
MS.gene63213.t1 | MTR_7g032380 | 32.090 | 134 | 84 | 3 | 300 | 427 | 224 | 356 | 4.11e-12 | 67.8 |
MS.gene63213.t1 | MTR_2g007500 | 32.680 | 153 | 83 | 3 | 8 | 160 | 3 | 135 | 1.75e-13 | 71.6 |
MS.gene63213.t1 | MTR_2g007400 | 24.494 | 445 | 253 | 15 | 19 | 430 | 12 | 406 | 1.83e-13 | 72.0 |
MS.gene63213.t1 | MTR_3g023630 | 29.082 | 196 | 115 | 7 | 17 | 205 | 6 | 184 | 3.41e-13 | 71.2 |
MS.gene63213.t1 | MTR_4g090940 | 30.435 | 161 | 97 | 6 | 1 | 159 | 141 | 288 | 4.82e-13 | 71.2 |
MS.gene63213.t1 | MTR_7g034090 | 30.137 | 146 | 90 | 2 | 17 | 159 | 2 | 138 | 6.12e-13 | 70.5 |
MS.gene63213.t1 | MTR_3g040700 | 24.297 | 391 | 208 | 14 | 18 | 386 | 42 | 366 | 8.30e-13 | 70.1 |
MS.gene63213.t1 | MTR_7g033940 | 34.014 | 147 | 85 | 5 | 4 | 146 | 76 | 214 | 8.30e-13 | 67.8 |
MS.gene63213.t1 | MTR_8g014180 | 53.333 | 60 | 26 | 1 | 1 | 60 | 1 | 58 | 1.20e-12 | 63.2 |
MS.gene63213.t1 | MTR_5g083890 | 24.631 | 406 | 245 | 13 | 19 | 397 | 6 | 377 | 1.58e-12 | 69.7 |
MS.gene63213.t1 | MTR_3g082890 | 34.706 | 170 | 91 | 6 | 2 | 167 | 80 | 233 | 1.94e-12 | 69.3 |
MS.gene63213.t1 | MTR_3g107100 | 30.811 | 185 | 101 | 7 | 14 | 193 | 6 | 168 | 2.22e-12 | 68.9 |
MS.gene63213.t1 | MTR_7g032370 | 32.847 | 137 | 84 | 3 | 298 | 427 | 217 | 352 | 2.37e-12 | 68.2 |
MS.gene63213.t1 | MTR_4g045740 | 44.828 | 87 | 37 | 4 | 7 | 91 | 9 | 86 | 2.90e-12 | 66.2 |
MS.gene63213.t1 | MTR_3g036330 | 38.532 | 109 | 59 | 4 | 6 | 111 | 1 | 104 | 3.16e-12 | 67.8 |
MS.gene63213.t1 | MTR_3g023470 | 32.461 | 191 | 105 | 9 | 8 | 195 | 4 | 173 | 3.24e-12 | 68.2 |
MS.gene63213.t1 | MTR_3g082890 | 34.524 | 168 | 90 | 6 | 4 | 167 | 2 | 153 | 3.34e-12 | 68.6 |
MS.gene63213.t1 | MTR_5g008920 | 31.613 | 155 | 88 | 4 | 9 | 159 | 2 | 142 | 4.21e-12 | 67.8 |
MS.gene63213.t1 | MTR_6g088705 | 31.088 | 193 | 112 | 8 | 1 | 191 | 1 | 174 | 4.79e-12 | 65.9 |
MS.gene63213.t1 | MTR_3g115430 | 41.333 | 75 | 41 | 1 | 353 | 427 | 54 | 125 | 5.21e-12 | 63.2 |
MS.gene63213.t1 | MTR_7g034115 | 34.247 | 146 | 79 | 4 | 18 | 159 | 10 | 142 | 5.74e-12 | 67.4 |
MS.gene63213.t1 | MTR_4g056030 | 34.459 | 148 | 82 | 5 | 12 | 159 | 5 | 137 | 6.05e-12 | 67.8 |
MS.gene63213.t1 | MTR_7g033990 | 34.815 | 135 | 77 | 6 | 19 | 150 | 11 | 137 | 8.41e-12 | 67.0 |
MS.gene63213.t1 | MTR_7g056447 | 31.333 | 150 | 86 | 4 | 19 | 165 | 9 | 144 | 8.42e-12 | 66.2 |
MS.gene63213.t1 | MTR_4g056020 | 35.135 | 148 | 81 | 6 | 12 | 159 | 5 | 137 | 9.42e-12 | 67.0 |
MS.gene63213.t1 | MTR_8g085430 | 31.847 | 157 | 88 | 5 | 18 | 165 | 10 | 156 | 1.53e-11 | 65.9 |
MS.gene63213.t1 | MTR_3g107160 | 33.117 | 154 | 86 | 5 | 16 | 162 | 7 | 150 | 1.61e-11 | 65.9 |
MS.gene63213.t1 | MTR_4g098590 | 33.562 | 146 | 86 | 4 | 21 | 160 | 1 | 141 | 1.63e-11 | 65.9 |
MS.gene63213.t1 | MTR_7g033945 | 34.459 | 148 | 71 | 6 | 17 | 153 | 9 | 141 | 1.93e-11 | 63.2 |
MS.gene63213.t1 | MTR_6g088700 | 41.111 | 90 | 41 | 2 | 6 | 91 | 1 | 82 | 1.95e-11 | 65.9 |
MS.gene63213.t1 | MTR_5g058100 | 31.333 | 150 | 96 | 3 | 12 | 159 | 2 | 146 | 2.28e-11 | 65.5 |
MS.gene63213.t1 | MTR_2g007450 | 30.055 | 183 | 106 | 5 | 6 | 168 | 1 | 181 | 2.55e-11 | 65.5 |
MS.gene63213.t1 | MTR_1g094760 | 31.720 | 186 | 105 | 8 | 7 | 191 | 14 | 178 | 2.91e-11 | 65.9 |
MS.gene63213.t1 | MTR_4g051640 | 34.831 | 89 | 52 | 1 | 5 | 93 | 16 | 98 | 3.01e-11 | 62.0 |
MS.gene63213.t1 | MTR_7g084080 | 30.612 | 196 | 109 | 8 | 6 | 194 | 1 | 176 | 3.08e-11 | 64.3 |
MS.gene63213.t1 | MTR_5g008950 | 31.655 | 139 | 83 | 4 | 297 | 427 | 231 | 365 | 3.31e-11 | 65.1 |
MS.gene63213.t1 | MTR_5g008950 | 32.432 | 148 | 81 | 4 | 21 | 165 | 1 | 132 | 3.89e-11 | 64.7 |
MS.gene63213.t1 | MTR_1g492880 | 39.362 | 94 | 42 | 3 | 12 | 101 | 3 | 85 | 5.31e-11 | 59.3 |
MS.gene63213.t1 | MTR_2g099980 | 29.814 | 161 | 103 | 5 | 1 | 159 | 20 | 172 | 5.48e-11 | 64.7 |
MS.gene63213.t1 | MTR_4g092440 | 40.909 | 88 | 42 | 2 | 8 | 93 | 21 | 100 | 7.53e-11 | 64.3 |
MS.gene63213.t1 | MTR_1g492880 | 39.362 | 94 | 42 | 3 | 12 | 101 | 3 | 85 | 7.74e-11 | 59.3 |
MS.gene63213.t1 | MTR_4g092440 | 39.773 | 88 | 43 | 2 | 8 | 93 | 21 | 100 | 7.77e-11 | 64.3 |
MS.gene63213.t1 | MTR_4g050930 | 30.102 | 196 | 115 | 8 | 1 | 193 | 11 | 187 | 9.09e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63213.t1 | AT5G56420 | 24.439 | 446 | 271 | 13 | 19 | 427 | 6 | 422 | 7.09e-20 | 91.7 |
MS.gene63213.t1 | AT5G56420 | 24.439 | 446 | 271 | 13 | 19 | 427 | 6 | 422 | 7.09e-20 | 91.7 |
MS.gene63213.t1 | AT5G56420 | 24.439 | 446 | 271 | 13 | 19 | 427 | 6 | 422 | 7.09e-20 | 91.7 |
MS.gene63213.t1 | AT4G26340 | 25.561 | 446 | 267 | 13 | 19 | 427 | 2 | 419 | 5.23e-18 | 86.3 |
MS.gene63213.t1 | AT1G69630 | 32.667 | 150 | 94 | 2 | 16 | 165 | 15 | 157 | 5.66e-16 | 80.1 |
MS.gene63213.t1 | AT1G16930 | 22.887 | 485 | 262 | 18 | 12 | 427 | 8 | 449 | 1.80e-15 | 78.6 |
MS.gene63213.t1 | AT1G16930 | 22.887 | 485 | 262 | 18 | 12 | 427 | 8 | 449 | 1.80e-15 | 78.6 |
MS.gene63213.t1 | AT1G16930 | 22.887 | 485 | 262 | 18 | 12 | 427 | 8 | 449 | 1.80e-15 | 78.6 |
MS.gene63213.t1 | AT4G10400 | 35.461 | 141 | 83 | 4 | 19 | 159 | 2 | 134 | 4.97e-15 | 77.0 |
MS.gene63213.t1 | AT4G10400 | 35.461 | 141 | 83 | 4 | 19 | 159 | 2 | 134 | 4.97e-15 | 77.0 |
MS.gene63213.t1 | AT4G10400 | 35.461 | 141 | 83 | 4 | 19 | 159 | 2 | 134 | 4.97e-15 | 77.0 |
MS.gene63213.t1 | AT4G09920 | 35.294 | 136 | 80 | 4 | 24 | 159 | 7 | 134 | 8.85e-15 | 75.1 |
MS.gene63213.t1 | AT4G09920 | 35.294 | 136 | 80 | 4 | 24 | 159 | 7 | 134 | 8.85e-15 | 75.1 |
MS.gene63213.t1 | AT4G09920 | 35.294 | 136 | 80 | 4 | 24 | 159 | 7 | 134 | 8.85e-15 | 75.1 |
MS.gene63213.t1 | AT4G09920 | 35.294 | 136 | 80 | 4 | 24 | 159 | 7 | 134 | 9.63e-15 | 75.1 |
MS.gene63213.t1 | AT4G09920 | 35.294 | 136 | 80 | 4 | 24 | 159 | 7 | 134 | 9.63e-15 | 75.1 |
MS.gene63213.t1 | AT3G59190 | 34.459 | 148 | 81 | 5 | 19 | 159 | 12 | 150 | 1.20e-13 | 72.8 |
MS.gene63213.t1 | AT3G59190 | 34.459 | 148 | 81 | 5 | 19 | 159 | 12 | 150 | 1.65e-13 | 72.8 |
MS.gene63213.t1 | AT1G78760 | 29.747 | 158 | 97 | 4 | 2 | 159 | 5 | 148 | 9.03e-13 | 70.1 |
MS.gene63213.t1 | AT3G49150 | 34.959 | 123 | 71 | 4 | 14 | 133 | 11 | 127 | 5.34e-12 | 67.8 |
MS.gene63213.t1 | AT3G44060 | 31.429 | 140 | 91 | 2 | 21 | 160 | 1 | 135 | 5.93e-12 | 67.8 |
MS.gene63213.t1 | AT3G59230 | 30.822 | 146 | 89 | 3 | 19 | 159 | 12 | 150 | 7.42e-12 | 67.4 |
MS.gene63213.t1 | AT3G59200 | 31.667 | 120 | 76 | 2 | 19 | 135 | 7 | 123 | 7.99e-12 | 67.0 |
MS.gene63213.t1 | AT5G56440 | 34.752 | 141 | 83 | 4 | 19 | 159 | 2 | 133 | 9.11e-12 | 67.0 |
MS.gene63213.t1 | AT3G59200 | 27.528 | 178 | 110 | 4 | 19 | 193 | 7 | 168 | 9.35e-12 | 67.4 |
MS.gene63213.t1 | AT3G03040 | 31.818 | 154 | 90 | 4 | 19 | 164 | 2 | 148 | 1.19e-11 | 67.0 |
MS.gene63213.t1 | AT4G00160 | 34.694 | 147 | 81 | 4 | 17 | 159 | 14 | 149 | 1.28e-11 | 66.6 |
MS.gene63213.t1 | AT3G59240 | 34.014 | 147 | 81 | 5 | 19 | 159 | 8 | 144 | 1.51e-11 | 66.6 |
MS.gene63213.t1 | AT3G03030 | 31.507 | 146 | 88 | 3 | 19 | 159 | 2 | 140 | 1.62e-11 | 65.9 |
MS.gene63213.t1 | AT3G03030 | 31.507 | 146 | 88 | 3 | 19 | 159 | 2 | 140 | 1.90e-11 | 66.2 |
MS.gene63213.t1 | AT5G56410 | 31.293 | 147 | 85 | 4 | 26 | 159 | 10 | 153 | 2.24e-11 | 66.2 |
MS.gene63213.t1 | AT5G38392 | 32.653 | 147 | 87 | 4 | 19 | 159 | 2 | 142 | 4.97e-11 | 62.8 |
Find 102 sgRNAs with CRISPR-Local
Find 134 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGCTTCAATTTGAATCTTC+TGG | 0.058772 | 8.4:-41493667 | MS.gene63213:CDS |
AGGAACATTGGTCAGAAATT+TGG | 0.157901 | 8.4:+41494099 | None:intergenic |
TGAAGTAGATTGCAAAATTC+TGG | 0.220987 | 8.4:+41493708 | None:intergenic |
AATTCTGGATTATTTATAAC+AGG | 0.256845 | 8.4:+41493723 | None:intergenic |
AGATGGGATTCGAGACATTT+AGG | 0.261103 | 8.4:+41493428 | None:intergenic |
AATGATGCCCAATGTGGTTT+TGG | 0.312213 | 8.4:+41493988 | None:intergenic |
TGCTTCAATTTGAATCTTCT+GGG | 0.329846 | 8.4:-41493666 | MS.gene63213:CDS |
GGAACATTGGTCAGAAATTT+GGG | 0.333801 | 8.4:+41494100 | None:intergenic |
CCACCTCTGGAAGCATCTTC+AGG | 0.340202 | 8.4:-41494868 | MS.gene63213:CDS |
TGTGCCACCTTCCTCCAAAA+AGG | 0.351535 | 8.4:-41494077 | MS.gene63213:CDS |
CTCGCAGATGGCGCCACCTC+TGG | 0.354975 | 8.4:-41494881 | MS.gene63213:CDS |
TCAGACATTGCCTTTCTCTC+TGG | 0.356495 | 8.4:-41494159 | MS.gene63213:CDS |
CCGTAGATGTAATGCATTAT+CGG | 0.360156 | 8.4:+41493871 | None:intergenic |
TAGGAAGAACCATCACCTTT+AGG | 0.373743 | 8.4:-41493479 | MS.gene63213:CDS |
GAAACTCGACATGCGCGTTA+TGG | 0.374368 | 8.4:-41494184 | MS.gene63213:CDS |
TTTCAATTGGGAGGAATGAT+AGG | 0.379509 | 8.4:+41494928 | None:intergenic |
GTATCCTTCTATGTGAATAT+AGG | 0.383394 | 8.4:+41493403 | None:intergenic |
AAATAAAATCCCATCGTTTG+AGG | 0.383750 | 8.4:-41494015 | MS.gene63213:CDS |
GTAGCCACGGCGGTTTCAAT+TGG | 0.384370 | 8.4:+41494915 | None:intergenic |
AAAACCACATTGGGCATCAT+TGG | 0.392776 | 8.4:-41493986 | MS.gene63213:CDS |
CTCACCTATATTCACATAGA+AGG | 0.400301 | 8.4:-41493407 | MS.gene63213:CDS |
ATCAGCATTTGGTCACCATC+GGG | 0.411925 | 8.4:+41494612 | None:intergenic |
AATATGCAAGTTTCGAGAAC+GGG | 0.417149 | 8.4:+41494132 | None:intergenic |
TGGCACATGACAGAGCCTTT+TGG | 0.421479 | 8.4:+41493242 | None:intergenic |
GATGCAGATGTGTCTCCTTA+AGG | 0.433765 | 8.4:-41493209 | None:intergenic |
AACGGGGCAGCCAGAGAGAA+AGG | 0.437002 | 8.4:+41494149 | None:intergenic |
TGGGCTCCACCTTCAAGAAC+TGG | 0.439888 | 8.4:-41494652 | MS.gene63213:CDS |
CTCTGAGGCAGTTCAGAATA+GGG | 0.440335 | 8.4:+41493897 | None:intergenic |
CCTGTCTTGTTTCTCGCAGA+TGG | 0.442850 | 8.4:-41494893 | MS.gene63213:CDS |
AGGTCTGCCAAAACCACATT+GGG | 0.446150 | 8.4:-41493995 | MS.gene63213:CDS |
GCACCAACCTCGTTTCCCTT+AGG | 0.448633 | 8.4:-41494566 | MS.gene63213:intron |
TCTCTGAGGCAGTTCAGAAT+AGG | 0.453518 | 8.4:+41493896 | None:intergenic |
CCGTCTCCACTCTGGCATAT+CGG | 0.454386 | 8.4:-41494727 | MS.gene63213:CDS |
AAGAAGGGAGGATCAGCATT+TGG | 0.464635 | 8.4:+41494601 | None:intergenic |
ATGTGGATCACTGCCGCCAT+TGG | 0.467542 | 8.4:-41494672 | MS.gene63213:CDS |
TCAGCTCTTCTTCAAGTCCT+TGG | 0.472411 | 8.4:+41493381 | None:intergenic |
GTGCAATTCAAGAGGGAAGA+AGG | 0.476286 | 8.4:+41494585 | None:intergenic |
TAGCCACGGCGGTTTCAATT+GGG | 0.476331 | 8.4:+41494916 | None:intergenic |
TTCGAATGTCACGGGATGTA+CGG | 0.483799 | 8.4:+41494754 | None:intergenic |
TGTGGATCACTGCCGCCATT+GGG | 0.483997 | 8.4:-41494671 | MS.gene63213:CDS |
CAGAAGATTCAAATTGAAGC+AGG | 0.487670 | 8.4:+41493668 | None:intergenic |
TCAACAATGGAAATTTCTCA+TGG | 0.492414 | 8.4:-41494048 | MS.gene63213:CDS |
CGTAGATGTAATGCATTATC+GGG | 0.495397 | 8.4:+41493872 | None:intergenic |
AGATTATCCCGTGCACCAAA+AGG | 0.500478 | 8.4:-41493257 | MS.gene63213:CDS |
CGAAAGTTCCGTCTCCACTC+TGG | 0.511900 | 8.4:-41494735 | MS.gene63213:CDS |
CATTTGGTCACCATCGGGGT+TGG | 0.512406 | 8.4:+41494617 | None:intergenic |
TGTCGAGATCCAGTTCTTGA+AGG | 0.515111 | 8.4:+41494643 | None:intergenic |
CTATGTGAATATAGGTGAGA+TGG | 0.515863 | 8.4:+41493411 | None:intergenic |
CCGATAATGCATTACATCTA+CGG | 0.525655 | 8.4:-41493871 | MS.gene63213:CDS |
AGTTTCAGCCACTTGAGTGA+TGG | 0.526074 | 8.4:+41494201 | None:intergenic |
GATGTAGCAGTGCGAGTCAT+CGG | 0.528849 | 8.4:+41494833 | None:intergenic |
TGCAGCTCACATGCTCCTAA+AGG | 0.530041 | 8.4:+41493464 | None:intergenic |
ATGTGGCACACTAGAGAGTC+CGG | 0.535850 | 8.4:+41494951 | None:intergenic |
TTTGGCAGACCTCAAACGAT+GGG | 0.549037 | 8.4:+41494006 | None:intergenic |
TCTCATAATTCAAATAAGCA+AGG | 0.549803 | 8.4:-41493610 | MS.gene63213:intron |
GGAAGGTGGCACAGGAACAT+TGG | 0.549960 | 8.4:+41494087 | None:intergenic |
GATCAGCATTTGGTCACCAT+CGG | 0.551411 | 8.4:+41494611 | None:intergenic |
CCGATATGCCAGAGTGGAGA+CGG | 0.554409 | 8.4:+41494727 | None:intergenic |
GAGGTCTGCCAAAACCACAT+TGG | 0.557086 | 8.4:-41493996 | MS.gene63213:CDS |
TTCTGGATTATTTATAACAG+GGG | 0.560129 | 8.4:+41493725 | None:intergenic |
TATGTGAATATAGGTGAGAT+GGG | 0.565909 | 8.4:+41493412 | None:intergenic |
CGACTTGATGAGTATTCTAC+CGG | 0.568711 | 8.4:-41494970 | MS.gene63213:CDS |
CCTGAAGATGCTTCCAGAGG+TGG | 0.571117 | 8.4:+41494868 | None:intergenic |
TTGGGAGGAATGATAGGATG+TGG | 0.576739 | 8.4:+41494934 | None:intergenic |
CATCTGCATCAAATTCAAGT+TGG | 0.579696 | 8.4:+41493222 | None:intergenic |
TCACATGCTCCTAAAGGTGA+TGG | 0.580001 | 8.4:+41493470 | None:intergenic |
AGTGCGAGTCATCGGAGAAG+TGG | 0.583425 | 8.4:+41494841 | None:intergenic |
CGAGATCCAGTTCTTGAAGG+TGG | 0.585480 | 8.4:+41494646 | None:intergenic |
TGACCTAAGGGAAACGAGGT+TGG | 0.590159 | 8.4:+41494563 | None:intergenic |
TGCAATTCAAGAGGGAAGAA+GGG | 0.594414 | 8.4:+41494586 | None:intergenic |
GACGGAACTTTCGAATGTCA+CGG | 0.599917 | 8.4:+41494745 | None:intergenic |
ACGGAACTTTCGAATGTCAC+GGG | 0.601922 | 8.4:+41494746 | None:intergenic |
AAATATGCAAGTTTCGAGAA+CGG | 0.602701 | 8.4:+41494131 | None:intergenic |
ATTCTGGATTATTTATAACA+GGG | 0.605085 | 8.4:+41493724 | None:intergenic |
CACATGTTGATGCAGTTGCT+AGG | 0.605641 | 8.4:+41494690 | None:intergenic |
CGAGGTTGGTGCAATTCAAG+AGG | 0.606867 | 8.4:+41494577 | None:intergenic |
GAATGTCACGGGATGTACGG+AGG | 0.618589 | 8.4:+41494757 | None:intergenic |
CCACGGCGGTTTCAATTGGG+AGG | 0.619307 | 8.4:+41494919 | None:intergenic |
AATGTCACGGGATGTACGGA+GGG | 0.633611 | 8.4:+41494758 | None:intergenic |
TTGAAGGTGGAGCCCAATGG+CGG | 0.634148 | 8.4:+41494659 | None:intergenic |
CTAGCAACTGCATCAACATG+TGG | 0.635235 | 8.4:-41494689 | MS.gene63213:CDS |
TTTATAACAGGGGCACGAAG+TGG | 0.635619 | 8.4:+41493735 | None:intergenic |
CCATCTGCGAGAAACAAGAC+AGG | 0.637626 | 8.4:+41494893 | None:intergenic |
CTCGACATAGCCAACCCCGA+TGG | 0.641689 | 8.4:-41494627 | MS.gene63213:CDS |
AGAAGATTCAAATTGAAGCA+GGG | 0.643008 | 8.4:+41493669 | None:intergenic |
TGGCAACGTGCATAGTGTTG+TGG | 0.644841 | 8.4:-41493966 | MS.gene63213:CDS |
CGGTAGAATACTCATCAAGT+CGG | 0.650262 | 8.4:+41494971 | None:intergenic |
TTCTTGAAGGTGGAGCCCAA+TGG | 0.650619 | 8.4:+41494656 | None:intergenic |
ATATGCAAGTTTCGAGAACG+GGG | 0.657180 | 8.4:+41494133 | None:intergenic |
AGAAACAAGACAGGTAGCCA+CGG | 0.675062 | 8.4:+41494902 | None:intergenic |
TCAGCATTTGGTCACCATCG+GGG | 0.679792 | 8.4:+41494613 | None:intergenic |
ATTCACATAGAAGGATACCA+AGG | 0.680294 | 8.4:-41493398 | MS.gene63213:CDS |
GAGGTTGGTGCAATTCAAGA+GGG | 0.693328 | 8.4:+41494578 | None:intergenic |
AGACCTGAAGATGCTTCCAG+AGG | 0.695151 | 8.4:+41494865 | None:intergenic |
AATTCAAGAGGGAAGAAGGG+AGG | 0.701014 | 8.4:+41494589 | None:intergenic |
AAGCTGACCTAAGGGAAACG+AGG | 0.701093 | 8.4:+41494559 | None:intergenic |
ATGCATTATCGGGATCTCTG+AGG | 0.702931 | 8.4:+41493882 | None:intergenic |
CCTCCCAATTGAAACCGCCG+TGG | 0.709533 | 8.4:-41494919 | MS.gene63213:CDS |
GTTGCCAATGATGCCCAATG+TGG | 0.714684 | 8.4:+41493982 | None:intergenic |
AACAAGACAGGTAGCCACGG+CGG | 0.716839 | 8.4:+41494905 | None:intergenic |
AGAGAAGAAGAAGAACACGA+TGG | 0.736796 | 8.4:-41494996 | MS.gene63213:CDS |
GTTCATCCGATATGCCAGAG+TGG | 0.744615 | 8.4:+41494721 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATATAATGAAAGTTAATTTT+GGG | + | chr8.4:41493894-41493913 | None:intergenic | 10.0% |
!!! | TATATAATGAAAGTTAATTT+TGG | + | chr8.4:41493895-41493914 | None:intergenic | 10.0% |
!! | AACTTTCATTATATAATATC+TGG | - | chr8.4:41493900-41493919 | MS.gene63213:CDS | 15.0% |
!! | AATTCTGGATTATTTATAAC+AGG | + | chr8.4:41494514-41494533 | None:intergenic | 20.0% |
!! | AGTTTAATTCAATGAATGTT+TGG | - | chr8.4:41494662-41494681 | MS.gene63213:CDS | 20.0% |
!! | ATTCTGGATTATTTATAACA+GGG | + | chr8.4:41494513-41494532 | None:intergenic | 20.0% |
!!! | TATTTTTGTTGATATTTCGA+TGG | - | chr8.4:41494925-41494944 | MS.gene63213:CDS | 20.0% |
!!! | TGTATCTGTATAACTATTTT+TGG | - | chr8.4:41494433-41494452 | MS.gene63213:intron | 20.0% |
! | AAAAAGGTGAAATTCAACAA+TGG | - | chr8.4:41494173-41494192 | MS.gene63213:CDS | 25.0% |
! | AAAAATATACATGCGATTCA+TGG | - | chr8.4:41494716-41494735 | MS.gene63213:CDS | 25.0% |
! | AGAATGAAATGAAAACAGAA+GGG | - | chr8.4:41493858-41493877 | MS.gene63213:CDS | 25.0% |
! | TAGAATGAAATGAAAACAGA+AGG | - | chr8.4:41493857-41493876 | MS.gene63213:CDS | 25.0% |
! | TCTCATAATTCAAATAAGCA+AGG | - | chr8.4:41494624-41494643 | MS.gene63213:CDS | 25.0% |
! | TTCTGGATTATTTATAACAG+GGG | + | chr8.4:41494512-41494531 | None:intergenic | 25.0% |
!! | ATTGTTGAATTTCACCTTTT+TGG | + | chr8.4:41494174-41494193 | None:intergenic | 25.0% |
!!! | AACGATGGGATTTTATTTTA+AGG | + | chr8.4:41494217-41494236 | None:intergenic | 25.0% |
AAATAAAATCCCATCGTTTG+AGG | - | chr8.4:41494219-41494238 | MS.gene63213:intron | 30.0% | |
AAATATGCAAGTTTCGAGAA+CGG | + | chr8.4:41494106-41494125 | None:intergenic | 30.0% | |
AGAAGATTCAAATTGAAGCA+GGG | + | chr8.4:41494568-41494587 | None:intergenic | 30.0% | |
GTAGATAATGCTAACTTTCA+TGG | - | chr8.4:41493942-41493961 | MS.gene63213:CDS | 30.0% | |
GTATCCTTCTATGTGAATAT+AGG | + | chr8.4:41494834-41494853 | None:intergenic | 30.0% | |
TATGTGAATATAGGTGAGAT+GGG | + | chr8.4:41494825-41494844 | None:intergenic | 30.0% | |
TCAACAATGGAAATTTCTCA+TGG | - | chr8.4:41494186-41494205 | MS.gene63213:CDS | 30.0% | |
TGAAGTAGATTGCAAAATTC+TGG | + | chr8.4:41494529-41494548 | None:intergenic | 30.0% | |
TGCTTCAATTTGAATCTTCT+GGG | - | chr8.4:41494568-41494587 | MS.gene63213:CDS | 30.0% | |
TTGTACATGATAACAAGTGA+TGG | + | chr8.4:41494472-41494491 | None:intergenic | 30.0% | |
! | CATATCTTGATGTCTTTTGT+CGG | - | chr8.4:41494294-41494313 | MS.gene63213:intron | 30.0% |
! | GCTGAATATATTTTGCAGAA+CGG | - | chr8.4:41494881-41494900 | MS.gene63213:CDS | 30.0% |
AATATGCAAGTTTCGAGAAC+GGG | + | chr8.4:41494105-41494124 | None:intergenic | 35.0% | |
AGGAACATTGGTCAGAAATT+TGG | + | chr8.4:41494138-41494157 | None:intergenic | 35.0% | |
ATTCACATAGAAGGATACCA+AGG | - | chr8.4:41494836-41494855 | MS.gene63213:CDS | 35.0% | |
CAGAAGATTCAAATTGAAGC+AGG | + | chr8.4:41494569-41494588 | None:intergenic | 35.0% | |
CATCTGCATCAAATTCAAGT+TGG | + | chr8.4:41495015-41495034 | None:intergenic | 35.0% | |
CCGATAATGCATTACATCTA+CGG | - | chr8.4:41494363-41494382 | MS.gene63213:intron | 35.0% | |
CCGTAGATGTAATGCATTAT+CGG | + | chr8.4:41494366-41494385 | None:intergenic | 35.0% | |
CGTAGATGTAATGCATTATC+GGG | + | chr8.4:41494365-41494384 | None:intergenic | 35.0% | |
CTATGTGAATATAGGTGAGA+TGG | + | chr8.4:41494826-41494845 | None:intergenic | 35.0% | |
CTCACCTATATTCACATAGA+AGG | - | chr8.4:41494827-41494846 | MS.gene63213:CDS | 35.0% | |
CTGCTTCAATTTGAATCTTC+TGG | - | chr8.4:41494567-41494586 | MS.gene63213:CDS | 35.0% | |
GGAACATTGGTCAGAAATTT+GGG | + | chr8.4:41494137-41494156 | None:intergenic | 35.0% | |
TAACTGAAAAGCTGACCTAA+GGG | + | chr8.4:41493686-41493705 | None:intergenic | 35.0% | |
TTGTTATCATGTACAAGCAG+TGG | - | chr8.4:41494476-41494495 | MS.gene63213:intron | 35.0% | |
TTTCAATTGGGAGGAATGAT+AGG | + | chr8.4:41493309-41493328 | None:intergenic | 35.0% | |
! | GTTGAATTTCACCTTTTTGG+AGG | + | chr8.4:41494171-41494190 | None:intergenic | 35.0% |
! | TTCATTTTCCATCACTCAAG+TGG | - | chr8.4:41494025-41494044 | MS.gene63213:CDS | 35.0% |
!! | AATTTCACCTTTTTGGAGGA+AGG | + | chr8.4:41494167-41494186 | None:intergenic | 35.0% |
!! | GGGATAATCTTTTGAGAGAA+CGG | + | chr8.4:41494967-41494986 | None:intergenic | 35.0% |
AAAACCACATTGGGCATCAT+TGG | - | chr8.4:41494248-41494267 | MS.gene63213:intron | 40.0% | |
AGAGAAGAAGAAGAACACGA+TGG | - | chr8.4:41493238-41493257 | MS.gene63213:CDS | 40.0% | |
AGATGGGATTCGAGACATTT+AGG | + | chr8.4:41494809-41494828 | None:intergenic | 40.0% | |
ATATGCAAGTTTCGAGAACG+GGG | + | chr8.4:41494104-41494123 | None:intergenic | 40.0% | |
CGACTTGATGAGTATTCTAC+CGG | - | chr8.4:41493264-41493283 | MS.gene63213:CDS | 40.0% | |
CGGTAGAATACTCATCAAGT+CGG | + | chr8.4:41493266-41493285 | None:intergenic | 40.0% | |
GTAACTGAAAAGCTGACCTA+AGG | + | chr8.4:41493687-41493706 | None:intergenic | 40.0% | |
GTTCTTCCTATCGACAACAA+GGG | + | chr8.4:41494745-41494764 | None:intergenic | 40.0% | |
TAGGAAGAACCATCACCTTT+AGG | - | chr8.4:41494755-41494774 | MS.gene63213:CDS | 40.0% | |
TGCAATTCAAGAGGGAAGAA+GGG | + | chr8.4:41493651-41493670 | None:intergenic | 40.0% | |
! | AATGATGCCCAATGTGGTTT+TGG | + | chr8.4:41494249-41494268 | None:intergenic | 40.0% |
AAGAAGGGAGGATCAGCATT+TGG | + | chr8.4:41493636-41493655 | None:intergenic | 45.0% | |
AATTCAAGAGGGAAGAAGGG+AGG | + | chr8.4:41493648-41493667 | None:intergenic | 45.0% | |
ACGGAACTTTCGAATGTCAC+GGG | + | chr8.4:41493491-41493510 | None:intergenic | 45.0% | |
AGAAACAAGACAGGTAGCCA+CGG | + | chr8.4:41493335-41493354 | None:intergenic | 45.0% | |
AGATTATCCCGTGCACCAAA+AGG | - | chr8.4:41494977-41494996 | MS.gene63213:CDS | 45.0% | |
AGGTCTGCCAAAACCACATT+GGG | - | chr8.4:41494239-41494258 | MS.gene63213:intron | 45.0% | |
AGTTTCAGCCACTTGAGTGA+TGG | + | chr8.4:41494036-41494055 | None:intergenic | 45.0% | |
ATCAGCATTTGGTCACCATC+GGG | + | chr8.4:41493625-41493644 | None:intergenic | 45.0% | |
ATGCATTATCGGGATCTCTG+AGG | + | chr8.4:41494355-41494374 | None:intergenic | 45.0% | |
CACATGTTGATGCAGTTGCT+AGG | + | chr8.4:41493547-41493566 | None:intergenic | 45.0% | |
CTAGCAACTGCATCAACATG+TGG | - | chr8.4:41493545-41493564 | MS.gene63213:intron | 45.0% | |
GACGGAACTTTCGAATGTCA+CGG | + | chr8.4:41493492-41493511 | None:intergenic | 45.0% | |
GATCAGCATTTGGTCACCAT+CGG | + | chr8.4:41493626-41493645 | None:intergenic | 45.0% | |
GCTGCGTCATTCGACAAAAA+AGG | - | chr8.4:41494385-41494404 | MS.gene63213:intron | 45.0% | |
GGTTCTTCCTATCGACAACA+AGG | + | chr8.4:41494746-41494765 | None:intergenic | 45.0% | |
GTGCAATTCAAGAGGGAAGA+AGG | + | chr8.4:41493652-41493671 | None:intergenic | 45.0% | |
TCACATGCTCCTAAAGGTGA+TGG | + | chr8.4:41494767-41494786 | None:intergenic | 45.0% | |
TCAGACATTGCCTTTCTCTC+TGG | - | chr8.4:41494075-41494094 | MS.gene63213:CDS | 45.0% | |
TCAGCTCTTCTTCAAGTCCT+TGG | + | chr8.4:41494856-41494875 | None:intergenic | 45.0% | |
TGTCGAGATCCAGTTCTTGA+AGG | + | chr8.4:41493594-41493613 | None:intergenic | 45.0% | |
TTCGAATGTCACGGGATGTA+CGG | + | chr8.4:41493483-41493502 | None:intergenic | 45.0% | |
TTGGGAGGAATGATAGGATG+TGG | + | chr8.4:41493303-41493322 | None:intergenic | 45.0% | |
TTTGGCAGACCTCAAACGAT+GGG | + | chr8.4:41494231-41494250 | None:intergenic | 45.0% | |
! | TCTAAACGCTGCAGTCTTGT+TGG | - | chr8.4:41493970-41493989 | MS.gene63213:CDS | 45.0% |
! | TTTATAACAGGGGCACGAAG+TGG | + | chr8.4:41494502-41494521 | None:intergenic | 45.0% |
! | TTTTGGCAGACCTCAAACGA+TGG | + | chr8.4:41494232-41494251 | None:intergenic | 45.0% |
!! | CTCTGAGGCAGTTCAGAATA+GGG | + | chr8.4:41494340-41494359 | None:intergenic | 45.0% |
!! | GAGGTTGGTGCAATTCAAGA+GGG | + | chr8.4:41493659-41493678 | None:intergenic | 45.0% |
!! | TCTCTGAGGCAGTTCAGAAT+AGG | + | chr8.4:41494341-41494360 | None:intergenic | 45.0% |
!! | TTCACCTTTTTGGAGGAAGG+TGG | + | chr8.4:41494164-41494183 | None:intergenic | 45.0% |
AAGCTGACCTAAGGGAAACG+AGG | + | chr8.4:41493678-41493697 | None:intergenic | 50.0% | |
AATGTCACGGGATGTACGGA+GGG | + | chr8.4:41493479-41493498 | None:intergenic | 50.0% | |
AGACCTGAAGATGCTTCCAG+AGG | + | chr8.4:41493372-41493391 | None:intergenic | 50.0% | |
ATGTGGCACACTAGAGAGTC+CGG | + | chr8.4:41493286-41493305 | None:intergenic | 50.0% | |
CCATCTGCGAGAAACAAGAC+AGG | + | chr8.4:41493344-41493363 | None:intergenic | 50.0% | |
CGAGATCCAGTTCTTGAAGG+TGG | + | chr8.4:41493591-41493610 | None:intergenic | 50.0% | |
GAAACTCGACATGCGCGTTA+TGG | - | chr8.4:41494050-41494069 | MS.gene63213:CDS | 50.0% | |
GAGGTCTGCCAAAACCACAT+TGG | - | chr8.4:41494238-41494257 | MS.gene63213:intron | 50.0% | |
GATGTAGCAGTGCGAGTCAT+CGG | + | chr8.4:41493404-41493423 | None:intergenic | 50.0% | |
GTTCATCCGATATGCCAGAG+TGG | + | chr8.4:41493516-41493535 | None:intergenic | 50.0% | |
GTTGCCAATGATGCCCAATG+TGG | + | chr8.4:41494255-41494274 | None:intergenic | 50.0% | |
TAGCCACGGCGGTTTCAATT+GGG | + | chr8.4:41493321-41493340 | None:intergenic | 50.0% | |
TCAGCATTTGGTCACCATCG+GGG | + | chr8.4:41493624-41493643 | None:intergenic | 50.0% | |
TGACCTAAGGGAAACGAGGT+TGG | + | chr8.4:41493674-41493693 | None:intergenic | 50.0% | |
TGCAGCTCACATGCTCCTAA+AGG | + | chr8.4:41494773-41494792 | None:intergenic | 50.0% | |
TGGCAACGTGCATAGTGTTG+TGG | - | chr8.4:41494268-41494287 | MS.gene63213:intron | 50.0% | |
TGTGCCACCTTCCTCCAAAA+AGG | - | chr8.4:41494157-41494176 | MS.gene63213:CDS | 50.0% | |
TTCTTGAAGGTGGAGCCCAA+TGG | + | chr8.4:41493581-41493600 | None:intergenic | 50.0% | |
! | TGGCACATGACAGAGCCTTT+TGG | + | chr8.4:41494995-41495014 | None:intergenic | 50.0% |
! | TGGTGTCCCTTGTTGTCGAT+AGG | - | chr8.4:41494736-41494755 | MS.gene63213:CDS | 50.0% |
!! | CCTGTCTTGTTTCTCGCAGA+TGG | - | chr8.4:41493341-41493360 | MS.gene63213:CDS | 50.0% |
!! | CGAGGTTGGTGCAATTCAAG+AGG | + | chr8.4:41493660-41493679 | None:intergenic | 50.0% |
!! | TGACAGAGCCTTTTGGTGCA+CGG | + | chr8.4:41494988-41495007 | None:intergenic | 50.0% |
!! | TTTTTGGAGGAAGGTGGCAC+AGG | + | chr8.4:41494158-41494177 | None:intergenic | 50.0% |
AACAAGACAGGTAGCCACGG+CGG | + | chr8.4:41493332-41493351 | None:intergenic | 55.0% | |
AGTGCGAGTCATCGGAGAAG+TGG | + | chr8.4:41493396-41493415 | None:intergenic | 55.0% | |
ATGTGGATCACTGCCGCCAT+TGG | - | chr8.4:41493562-41493581 | MS.gene63213:intron | 55.0% | |
CATTTGGTCACCATCGGGGT+TGG | + | chr8.4:41493620-41493639 | None:intergenic | 55.0% | |
CCGATATGCCAGAGTGGAGA+CGG | + | chr8.4:41493510-41493529 | None:intergenic | 55.0% | |
CCGTCTCCACTCTGGCATAT+CGG | - | chr8.4:41493507-41493526 | MS.gene63213:intron | 55.0% | |
CCTGAAGATGCTTCCAGAGG+TGG | + | chr8.4:41493369-41493388 | None:intergenic | 55.0% | |
CGAAAGTTCCGTCTCCACTC+TGG | - | chr8.4:41493499-41493518 | MS.gene63213:intron | 55.0% | |
GAATGTCACGGGATGTACGG+AGG | + | chr8.4:41493480-41493499 | None:intergenic | 55.0% | |
GCACCAACCTCGTTTCCCTT+AGG | - | chr8.4:41493668-41493687 | MS.gene63213:CDS | 55.0% | |
GGAAGGTGGCACAGGAACAT+TGG | + | chr8.4:41494150-41494169 | None:intergenic | 55.0% | |
GTAGCCACGGCGGTTTCAAT+TGG | + | chr8.4:41493322-41493341 | None:intergenic | 55.0% | |
TGGGCTCCACCTTCAAGAAC+TGG | - | chr8.4:41493582-41493601 | MS.gene63213:intron | 55.0% | |
TGTGGATCACTGCCGCCATT+GGG | - | chr8.4:41493563-41493582 | MS.gene63213:intron | 55.0% | |
TTGAAGGTGGAGCCCAATGG+CGG | + | chr8.4:41493578-41493597 | None:intergenic | 55.0% | |
!! | CCACCTCTGGAAGCATCTTC+AGG | - | chr8.4:41493366-41493385 | MS.gene63213:CDS | 55.0% |
!! | GACAGAGCCTTTTGGTGCAC+GGG | + | chr8.4:41494987-41495006 | None:intergenic | 55.0% |
AACGGGGCAGCCAGAGAGAA+AGG | + | chr8.4:41494088-41494107 | None:intergenic | 60.0% | |
CCACGGCGGTTTCAATTGGG+AGG | + | chr8.4:41493318-41493337 | None:intergenic | 60.0% | |
CCTCCCAATTGAAACCGCCG+TGG | - | chr8.4:41493315-41493334 | MS.gene63213:CDS | 60.0% | |
CTCGACATAGCCAACCCCGA+TGG | - | chr8.4:41493607-41493626 | MS.gene63213:intron | 60.0% | |
CTCGCAGATGGCGCCACCTC+TGG | - | chr8.4:41493353-41493372 | MS.gene63213:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 41493211 | 41495045 | 41493211 | ID=MS.gene63213 |
chr8.4 | mRNA | 41493211 | 41495045 | 41493211 | ID=MS.gene63213.t1;Parent=MS.gene63213 |
chr8.4 | exon | 41494567 | 41495045 | 41494567 | ID=MS.gene63213.t1.exon1;Parent=MS.gene63213.t1 |
chr8.4 | CDS | 41494567 | 41495045 | 41494567 | ID=cds.MS.gene63213.t1;Parent=MS.gene63213.t1 |
chr8.4 | exon | 41493850 | 41494231 | 41493850 | ID=MS.gene63213.t1.exon2;Parent=MS.gene63213.t1 |
chr8.4 | CDS | 41493850 | 41494231 | 41493850 | ID=cds.MS.gene63213.t1;Parent=MS.gene63213.t1 |
chr8.4 | exon | 41493611 | 41493760 | 41493611 | ID=MS.gene63213.t1.exon3;Parent=MS.gene63213.t1 |
chr8.4 | CDS | 41493611 | 41493760 | 41493611 | ID=cds.MS.gene63213.t1;Parent=MS.gene63213.t1 |
chr8.4 | exon | 41493211 | 41493498 | 41493211 | ID=MS.gene63213.t1.exon4;Parent=MS.gene63213.t1 |
chr8.4 | CDS | 41493211 | 41493498 | 41493211 | ID=cds.MS.gene63213.t1;Parent=MS.gene63213.t1 |
Gene Sequence |
Protein sequence |