AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene72954


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72954.t1 MTR_8g058965 57.082 466 167 9 12 453 4 460 2.62e-173 494
MS.gene72954.t1 MTR_8g469020 56.332 458 168 8 21 454 7 456 3.26e-170 486
MS.gene72954.t1 MTR_8g070950 59.130 460 161 11 1 454 1 439 1.38e-168 481
MS.gene72954.t1 MTR_8g062010 54.525 442 176 7 21 453 9 434 9.20e-155 446
MS.gene72954.t1 MTR_8g062080 54.072 442 179 8 21 453 23 449 3.50e-151 437
MS.gene72954.t1 MTR_8g062310 53.103 435 177 7 21 454 25 433 4.05e-145 421
MS.gene72954.t1 MTR_4g050250 52.817 426 164 9 1 395 1 420 6.62e-139 405
MS.gene72954.t1 MTR_8g062300 47.904 501 193 15 1 453 1 481 9.20e-132 389
MS.gene72954.t1 MTR_8g467790 48.477 394 155 10 21 403 148 504 6.57e-105 321
MS.gene72954.t1 MTR_2g083840 43.249 474 227 16 1 449 1 457 1.62e-100 308
MS.gene72954.t1 MTR_8g468810 41.004 478 238 17 1 449 1 463 2.24e-92 287
MS.gene72954.t1 MTR_8g014260 42.947 475 221 20 1 449 1 451 2.12e-91 285
MS.gene72954.t1 MTR_8g062270 41.722 453 224 15 21 448 16 453 2.46e-91 285
MS.gene72954.t1 MTR_5g092960 40.343 466 241 10 9 448 7 461 1.14e-87 275
MS.gene72954.t1 MTR_8g058970 40.787 483 235 16 7 449 6 477 1.43e-86 273
MS.gene72954.t1 MTR_8g467800 40.803 473 230 14 10 454 8 458 8.72e-84 265
MS.gene72954.t1 MTR_8g468840 40.625 448 236 12 19 447 12 448 2.39e-79 253
MS.gene72954.t1 MTR_8g468760 40.347 461 207 16 12 448 2 418 9.87e-78 248
MS.gene72954.t1 MTR_4g032730 37.395 476 249 14 11 448 2 466 2.91e-77 248
MS.gene72954.t1 MTR_8g445780 42.965 398 191 16 21 402 13 390 1.17e-76 244
MS.gene72954.t1 MTR_8g014160 39.062 448 191 16 21 449 41 425 1.17e-71 233
MS.gene72954.t1 MTR_8g468810 39.948 383 194 13 1 359 1 371 6.53e-66 216
MS.gene72954.t1 MTR_2g086020 73.973 146 38 0 309 454 175 320 9.86e-66 214
MS.gene72954.t1 MTR_2g086020 43.919 148 67 3 47 189 1 137 1.00e-23 101
MS.gene72954.t1 MTR_8g077460 37.071 437 196 15 21 449 10 375 3.02e-63 209
MS.gene72954.t1 MTR_5g092960 39.946 373 194 8 9 359 7 371 8.90e-61 203
MS.gene72954.t1 MTR_8g468810 43.092 304 145 10 1 285 1 295 8.74e-60 198
MS.gene72954.t1 MTR_8g468810 43.092 304 145 10 1 285 1 295 1.02e-59 199
MS.gene72954.t1 MTR_8g468810 43.092 304 145 10 1 285 1 295 1.95e-59 198
MS.gene72954.t1 MTR_4g024710 41.026 312 135 13 165 449 58 347 4.44e-51 176
MS.gene72954.t1 MTR_8g467800 42.475 299 142 10 10 290 8 294 2.89e-45 161
MS.gene72954.t1 MTR_8g014210 42.149 242 111 11 223 449 4 231 3.05e-39 141
MS.gene72954.t1 MTR_4g024745 39.731 297 130 13 163 432 10 284 2.71e-38 140
MS.gene72954.t1 MTR_5g021550 50.000 160 72 5 7 164 9 162 2.49e-37 134
MS.gene72954.t1 MTR_1g041245 30.317 442 229 18 21 449 11 386 3.99e-33 129
MS.gene72954.t1 MTR_7g115270 28.448 464 234 14 13 446 4 399 4.44e-33 129
MS.gene72954.t1 MTR_7g032380 28.348 448 218 16 12 449 2 356 1.59e-31 124
MS.gene72954.t1 MTR_8g014290 46.053 152 74 4 21 165 10 160 2.77e-31 118
MS.gene72954.t1 MTR_7g098510 29.060 468 236 17 1 449 1 391 4.77e-31 123
MS.gene72954.t1 MTR_5g008950 27.740 447 221 18 23 449 1 365 2.09e-30 121
MS.gene72954.t1 MTR_3g108150 30.137 438 232 16 21 448 13 386 3.49e-29 118
MS.gene72954.t1 MTR_5g084070 28.018 439 266 18 21 441 13 419 9.59e-29 117
MS.gene72954.t1 MTR_3g099800 64.368 87 30 1 361 446 19 105 1.20e-27 106
MS.gene72954.t1 MTR_7g056433 28.636 440 241 15 21 449 12 389 1.25e-27 114
MS.gene72954.t1 MTR_4g024720 40.110 182 85 5 1 164 1 176 3.67e-27 108
MS.gene72954.t1 MTR_7g033915 27.876 452 204 17 21 448 11 364 1.72e-26 110
MS.gene72954.t1 MTR_5g080710 27.982 436 277 16 21 441 33 446 2.59e-25 108
MS.gene72954.t1 MTR_7g033990 30.317 442 214 19 21 443 11 377 1.41e-24 105
MS.gene72954.t1 MTR_7g007080 30.310 452 223 22 21 452 4 383 2.66e-24 104
MS.gene72954.t1 MTR_3g107120 27.740 447 243 18 21 450 9 392 2.93e-24 104
MS.gene72954.t1 MTR_7g026500 28.217 443 241 18 21 448 14 394 7.68e-24 103
MS.gene72954.t1 MTR_3g107160 28.246 439 240 20 21 449 10 383 2.37e-23 101
MS.gene72954.t1 MTR_3g023630 26.949 449 227 20 20 449 7 373 3.29e-23 100
MS.gene72954.t1 MTR_7g032370 27.869 427 222 19 33 449 2 352 1.28e-22 99.0
MS.gene72954.t1 MTR_4g098590 29.587 436 216 21 23 432 1 371 1.23e-21 96.7
MS.gene72954.t1 MTR_2g007450 27.473 455 248 21 21 446 16 417 1.30e-21 97.1
MS.gene72954.t1 MTR_7g098480 26.144 459 257 10 1 448 1 388 1.84e-21 97.1
MS.gene72954.t1 MTR_1089s0010 25.446 448 239 19 21 449 8 379 6.84e-21 94.4
MS.gene72954.t1 MTR_1g108820 30.485 433 237 21 21 446 8 383 1.85e-20 93.2
MS.gene72954.t1 MTR_3g107100 25.495 455 246 19 21 449 11 398 3.84e-20 92.4
MS.gene72954.t1 MTR_7g088260 26.386 451 257 18 8 449 78 462 8.72e-20 92.0
MS.gene72954.t1 MTR_8g014230 51.190 84 39 2 359 442 17 98 1.15e-19 84.3
MS.gene72954.t1 MTR_5g058100 27.394 449 245 17 14 448 2 383 3.52e-19 89.4
MS.gene72954.t1 MTR_5g073420 26.291 426 221 20 11 421 2 349 5.01e-19 89.0
MS.gene72954.t1 MTR_2g008310 25.792 442 247 18 21 451 2 373 6.14e-19 89.0
MS.gene72954.t1 MTR_1g085120 27.314 443 249 17 19 449 90 471 9.03e-19 89.0
MS.gene72954.t1 MTR_1g085120 27.314 443 249 17 19 449 165 546 1.24e-18 89.0
MS.gene72954.t1 MTR_3g105060 28.341 434 232 19 21 449 14 373 1.51e-18 87.4
MS.gene72954.t1 MTR_7g056447 35.052 194 107 6 20 209 8 186 1.82e-18 85.9
MS.gene72954.t1 MTR_6g022500 26.728 434 255 15 21 449 101 476 2.23e-18 87.8
MS.gene72954.t1 MTR_6g011460 26.327 452 258 14 9 449 34 421 7.13e-18 85.9
MS.gene72954.t1 MTR_7g056277 25.056 447 238 17 21 448 259 627 7.72e-18 86.7
MS.gene72954.t1 MTR_3g082890 27.195 467 260 21 21 449 17 441 7.90e-18 85.9
MS.gene72954.t1 MTR_7g056287 25.056 443 247 16 19 448 1 371 1.30e-17 84.7
MS.gene72954.t1 MTR_4g080590 26.770 452 281 18 9 437 11 435 2.29e-17 84.7
MS.gene72954.t1 MTR_8g085430 32.850 207 105 9 21 211 11 199 2.57e-17 83.2
MS.gene72954.t1 MTR_3g071850 27.206 408 230 15 21 416 24 376 4.99e-17 84.3
MS.gene72954.t1 MTR_5g008920 32.075 212 114 9 23 227 14 202 1.11e-16 82.0
MS.gene72954.t1 MTR_1g038710 26.374 455 272 16 21 437 19 448 4.09e-16 80.9
MS.gene72954.t1 MTR_3g087260 27.366 486 262 21 17 448 8 456 9.07e-16 79.7
MS.gene72954.t1 MTR_3g040700 30.374 214 124 8 4 208 26 223 1.04e-15 79.3
MS.gene72954.t1 MTR_8g014220 33.962 212 82 6 1 206 1 160 1.66e-15 74.3
MS.gene72954.t1 MTR_3g108560 26.802 444 234 17 21 448 20 388 1.77e-15 78.2
MS.gene72954.t1 MTR_2g008320 24.169 451 249 17 21 451 52 429 1.84e-15 78.6
MS.gene72954.t1 MTR_7g055943 25.330 454 242 20 21 449 40 421 3.34e-15 77.8
MS.gene72954.t1 MTR_7g034115 34.300 207 105 8 17 212 7 193 7.71e-15 76.3
MS.gene72954.t1 MTR_7g034110 34.135 208 105 9 21 214 11 200 1.08e-14 75.5
MS.gene72954.t1 MTR_4g024770 56.522 69 25 2 1 69 8 71 1.44e-14 68.9
MS.gene72954.t1 MTR_4g056030 26.591 440 252 16 21 421 9 416 2.94e-14 75.1
MS.gene72954.t1 MTR_1g053025 25.618 445 252 18 21 446 2 386 7.66e-14 73.2
MS.gene72954.t1 MTR_7g034090 29.148 223 127 7 21 213 4 225 9.58e-14 73.2
MS.gene72954.t1 MTR_3g036250 31.313 198 111 8 20 208 4 185 1.09e-13 72.8
MS.gene72954.t1 MTR_2g007400 24.946 461 255 20 19 452 10 406 1.73e-13 72.4
MS.gene72954.t1 MTR_4g056040 34.298 242 103 12 21 219 9 237 2.74e-13 72.0
MS.gene72954.t1 MTR_7g098570 28.986 207 131 4 8 211 7 200 5.30e-13 71.2
MS.gene72954.t1 MTR_7g098570 34.074 135 79 2 317 444 257 388 4.33e-11 65.1
MS.gene72954.t1 MTR_5g061680 31.707 205 118 11 11 208 2 191 5.77e-13 70.1
MS.gene72954.t1 MTR_5g073370 27.628 409 225 17 21 422 5 349 1.01e-12 69.7
MS.gene72954.t1 MTR_4g130200 24.009 454 257 16 11 448 10 391 1.09e-12 69.7
MS.gene72954.t1 MTR_7g075820 31.944 216 108 8 21 210 6 208 1.65e-12 69.3
MS.gene72954.t1 MTR_3g467400 29.126 206 120 8 19 208 1 196 1.67e-12 68.9
MS.gene72954.t1 MTR_7g033945 34.225 187 79 10 21 189 11 171 2.59e-12 65.5
MS.gene72954.t1 MTR_3g115430 43.750 80 40 2 370 449 51 125 3.16e-12 63.9
MS.gene72954.t1 MTR_4g080590 30.568 229 138 9 9 231 11 224 3.87e-12 68.2
MS.gene72954.t1 MTR_7g033940 41.414 99 46 4 14 111 89 176 8.68e-12 65.1
MS.gene72954.t1 MTR_5g039970 29.902 204 131 5 8 208 6 200 1.07e-11 66.2
MS.gene72954.t1 MTR_8g014180 58.333 60 20 2 1 60 1 55 1.29e-11 60.1
MS.gene72954.t1 MTR_5g012840 43.243 111 58 4 340 449 212 318 2.02e-11 65.5
MS.gene72954.t1 MTR_1g492880 40.000 90 38 3 11 100 2 75 3.48e-11 60.5
MS.gene72954.t1 MTR_1g492880 40.000 90 38 3 11 100 2 75 4.40e-11 59.7
MS.gene72954.t1 MTR_4g134150 30.612 196 103 8 21 208 14 184 7.05e-11 62.4
MS.gene72954.t1 MTR_5g013500 35.294 136 80 5 320 449 232 365 9.58e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72954.t1 AT1G06630 33.460 263 160 7 21 272 12 270 1.28e-26 109
MS.gene72954.t1 AT1G06630 33.460 263 160 7 21 272 12 270 2.91e-26 109
MS.gene72954.t1 AT1G06630 33.460 263 160 7 21 272 12 270 2.91e-26 109
MS.gene72954.t1 AT1G06630 33.460 263 160 7 21 272 21 279 3.69e-26 110
MS.gene72954.t1 AT1G06630 33.460 263 160 7 21 272 12 270 3.98e-26 110
MS.gene72954.t1 AT1G06630 33.460 263 160 7 21 272 12 270 3.98e-26 110
MS.gene72954.t1 AT1G06630 33.460 263 160 7 21 272 12 270 3.98e-26 110
MS.gene72954.t1 AT1G06630 33.460 263 160 7 21 272 12 270 3.98e-26 110
MS.gene72954.t1 AT1G06630 33.460 263 160 7 21 272 12 270 1.14e-25 109
MS.gene72954.t1 AT1G78750 28.696 460 272 19 21 446 18 455 2.29e-25 108
MS.gene72954.t1 AT1G78750 28.696 460 272 19 21 446 18 455 2.29e-25 108
MS.gene72954.t1 AT5G56420 27.093 454 269 16 21 449 6 422 9.46e-25 106
MS.gene72954.t1 AT5G56420 27.093 454 269 16 21 449 6 422 9.46e-25 106
MS.gene72954.t1 AT5G56420 27.093 454 269 16 21 449 6 422 9.46e-25 106
MS.gene72954.t1 AT4G10400 27.252 444 270 16 21 448 2 408 1.12e-23 102
MS.gene72954.t1 AT4G10400 27.252 444 270 16 21 448 2 408 1.12e-23 102
MS.gene72954.t1 AT4G10400 27.252 444 270 16 21 448 2 408 1.12e-23 102
MS.gene72954.t1 AT4G26340 28.097 452 268 16 21 449 2 419 2.48e-23 102
MS.gene72954.t1 AT3G58920 26.693 502 260 20 21 449 2 468 3.72e-23 102
MS.gene72954.t1 AT5G53840 27.214 463 274 19 9 446 13 437 1.40e-22 100
MS.gene72954.t1 AT4G14096 35.556 225 122 9 21 236 8 218 2.80e-22 99.4
MS.gene72954.t1 AT4G14096 35.556 225 122 9 21 236 8 218 2.80e-22 99.4
MS.gene72954.t1 AT4G14103 34.081 223 126 8 21 234 8 218 6.80e-22 98.2
MS.gene72954.t1 AT4G14103 33.632 223 127 8 21 234 8 218 7.22e-22 97.4
MS.gene72954.t1 AT4G14103 33.632 223 127 8 21 234 8 218 7.22e-22 97.4
MS.gene72954.t1 AT2G26030 26.782 463 279 18 21 446 4 443 1.86e-21 97.1
MS.gene72954.t1 AT5G56370 26.509 464 260 18 21 448 2 420 1.93e-21 96.7
MS.gene72954.t1 AT5G56370 26.509 464 260 18 21 448 2 420 1.93e-21 96.7
MS.gene72954.t1 AT3G50710 28.172 465 259 20 21 449 2 427 4.35e-21 95.5
MS.gene72954.t1 AT5G56400 26.294 483 279 19 1 449 16 455 4.82e-21 95.9
MS.gene72954.t1 AT2G26030 26.998 463 273 18 21 446 4 438 5.73e-21 95.5
MS.gene72954.t1 AT2G26030 26.998 463 273 18 21 446 4 438 5.73e-21 95.5
MS.gene72954.t1 AT5G56560 26.802 444 276 17 23 449 7 418 1.05e-20 94.4
MS.gene72954.t1 AT3G59200 33.500 200 116 6 16 208 2 191 1.10e-20 93.6
MS.gene72954.t1 AT3G59200 33.500 200 116 6 16 208 2 191 1.75e-20 94.4
MS.gene72954.t1 AT5G22730 26.407 462 278 17 21 446 28 463 2.61e-20 93.6
MS.gene72954.t1 AT5G22730 26.407 462 278 17 21 446 28 463 2.61e-20 93.6
MS.gene72954.t1 AT1G32375 27.468 466 256 21 21 449 2 422 7.88e-20 91.7
MS.gene72954.t1 AT1G32375 27.468 466 256 21 21 449 2 422 7.88e-20 91.7
MS.gene72954.t1 AT5G22720 24.740 481 278 19 21 452 23 468 2.55e-19 90.5
MS.gene72954.t1 AT3G59230 33.168 202 111 7 21 208 12 203 5.11e-19 89.7
MS.gene72954.t1 AT1G51370 27.051 451 263 20 21 444 19 430 7.84e-19 89.0
MS.gene72954.t1 AT5G44950 27.166 427 268 14 21 422 4 412 9.41e-19 88.6
MS.gene72954.t1 AT5G60610 27.119 413 250 16 21 413 2 383 1.18e-18 87.8
MS.gene72954.t1 AT5G60610 27.119 413 250 16 21 413 2 383 1.18e-18 87.8
MS.gene72954.t1 AT3G59170 33.054 239 123 9 16 223 2 234 1.29e-18 88.6
MS.gene72954.t1 AT4G09920 34.375 192 109 7 21 208 2 180 1.58e-18 86.7
MS.gene72954.t1 AT4G09920 34.375 192 109 7 21 208 2 180 1.58e-18 86.7
MS.gene72954.t1 AT5G22610 24.249 466 309 14 1 450 1 438 1.83e-18 88.2
MS.gene72954.t1 AT4G09920 34.375 192 109 7 21 208 2 180 1.89e-18 85.9
MS.gene72954.t1 AT4G09920 34.375 192 109 7 21 208 2 180 1.89e-18 85.9
MS.gene72954.t1 AT4G09920 34.375 192 109 7 21 208 2 180 1.89e-18 85.9
MS.gene72954.t1 AT1G66310 26.735 490 252 23 7 446 7 439 1.95e-18 87.8
MS.gene72954.t1 AT1G16930 35.096 208 94 9 20 212 14 195 6.67e-18 86.3
MS.gene72954.t1 AT1G16930 35.096 208 94 9 20 212 14 195 6.67e-18 86.3
MS.gene72954.t1 AT1G16930 35.096 208 94 9 20 212 14 195 6.67e-18 86.3
MS.gene72954.t1 AT4G13965 26.350 463 270 20 12 446 1 420 7.21e-18 85.9
MS.gene72954.t1 AT5G56380 27.137 468 272 18 21 449 2 439 8.64e-18 85.9
MS.gene72954.t1 AT5G56380 27.137 468 272 18 21 449 2 439 8.64e-18 85.9
MS.gene72954.t1 AT3G59160 27.469 324 168 12 21 296 13 317 1.18e-17 85.5
MS.gene72954.t1 AT3G59210 35.961 203 105 7 21 212 7 195 1.34e-17 85.5
MS.gene72954.t1 AT3G59210 35.961 203 105 7 21 212 7 195 1.34e-17 85.5
MS.gene72954.t1 AT3G59210 35.961 203 105 7 21 212 7 195 1.34e-17 85.5
MS.gene72954.t1 AT3G59210 35.961 203 105 7 21 212 7 195 1.34e-17 85.5
MS.gene72954.t1 AT3G59210 35.961 203 105 7 21 212 7 195 1.34e-17 85.5
MS.gene72954.t1 AT5G56820 26.923 468 253 20 15 446 9 423 1.56e-17 85.1
MS.gene72954.t1 AT5G56810 28.791 455 267 18 16 446 10 431 1.96e-17 84.7
MS.gene72954.t1 AT5G41830 31.500 200 119 7 21 208 13 206 5.57e-17 83.6
MS.gene72954.t1 AT1G58310 31.390 223 111 9 21 216 8 215 6.38e-17 83.6
MS.gene72954.t1 AT1G69630 31.963 219 125 8 1 213 1 201 7.54e-17 82.8
MS.gene72954.t1 AT5G41840 27.476 313 185 14 18 299 11 312 9.83e-17 83.2
MS.gene72954.t1 AT4G00320 32.178 202 115 9 21 208 13 206 1.27e-16 82.4
MS.gene72954.t1 AT3G03040 29.845 258 141 10 21 250 2 247 1.64e-16 82.0
MS.gene72954.t1 AT4G00160 37.245 196 108 7 17 208 11 195 2.25e-16 81.6
MS.gene72954.t1 AT5G50270 26.622 447 246 16 21 428 2 405 3.16e-16 80.9
MS.gene72954.t1 AT3G44810 32.512 203 113 7 23 213 9 199 3.40e-16 80.9
MS.gene72954.t1 AT5G38390 32.735 223 125 8 21 238 2 204 5.56e-16 80.5
MS.gene72954.t1 AT3G60040 31.364 220 131 7 21 224 13 228 8.87e-16 80.1
MS.gene72954.t1 AT3G26922 30.841 214 115 8 8 210 1 192 1.05e-15 78.2
MS.gene72954.t1 AT3G26922 30.841 214 115 8 8 210 1 192 1.05e-15 78.2
MS.gene72954.t1 AT3G44060 32.308 195 111 5 26 212 4 185 2.28e-15 78.2
MS.gene72954.t1 AT3G58820 32.278 158 90 5 21 170 2 150 2.40e-15 78.2
MS.gene72954.t1 AT4G13960 32.308 195 113 6 21 208 2 184 2.44e-15 78.6
MS.gene72954.t1 AT4G13960 32.308 195 113 6 21 208 2 184 2.44e-15 78.6
MS.gene72954.t1 AT3G60040 26.355 406 248 15 21 398 233 615 2.54e-15 79.0
MS.gene72954.t1 AT3G60040 26.355 406 248 15 21 398 232 614 2.63e-15 79.0
MS.gene72954.t1 AT3G60040 26.355 406 248 15 21 398 232 614 2.96e-15 78.6
MS.gene72954.t1 AT3G60040 26.355 406 248 15 21 398 230 612 3.07e-15 78.6
MS.gene72954.t1 AT3G59240 29.703 202 123 6 15 208 2 192 3.59e-15 78.2
MS.gene72954.t1 AT2G42720 34.536 194 114 7 21 208 2 188 4.47e-15 77.4
MS.gene72954.t1 AT5G56690 31.980 197 118 7 23 213 4 190 4.66e-15 77.0
MS.gene72954.t1 AT3G49030 26.360 478 254 21 16 448 16 440 5.20e-15 77.4
MS.gene72954.t1 AT3G59190 29.000 200 118 6 21 208 12 199 5.30e-15 77.0
MS.gene72954.t1 AT3G59190 29.000 200 118 6 21 208 12 199 8.61e-15 77.0
MS.gene72954.t1 AT3G03030 30.348 201 115 8 21 208 2 190 9.38e-15 75.5
MS.gene72954.t1 AT5G38396 27.848 237 145 8 21 241 2 228 1.52e-14 75.9
MS.gene72954.t1 AT3G03030 29.851 201 116 7 21 208 2 190 1.62e-14 75.9
MS.gene72954.t1 AT3G49150 31.980 197 112 9 21 208 16 199 2.10e-14 75.5
MS.gene72954.t1 AT5G56370 28.364 275 159 11 21 278 2 255 2.79e-14 73.9
MS.gene72954.t1 AT4G13985 23.632 457 299 14 21 446 19 456 4.00e-14 74.7
MS.gene72954.t1 AT4G15060 27.119 413 242 16 1 386 4 384 5.76e-14 73.9
MS.gene72954.t1 AT3G59000 31.492 181 105 6 21 192 2 172 6.20e-14 74.3
MS.gene72954.t1 AT5G38392 29.851 201 122 7 21 210 2 194 8.09e-14 70.9
MS.gene72954.t1 AT1G64540 28.470 281 138 13 21 272 5 251 1.05e-13 73.2
MS.gene72954.t1 AT1G64540 28.470 281 138 13 21 272 5 251 1.05e-13 73.2
MS.gene72954.t1 AT5G18780 26.580 459 273 21 21 446 11 438 1.07e-13 73.2
MS.gene72954.t1 AT5G18780 26.580 459 273 21 21 446 11 438 1.07e-13 73.2
MS.gene72954.t1 AT4G15060 32.487 197 119 7 21 213 172 358 2.06e-13 72.8
MS.gene72954.t1 AT1G48400 31.633 196 114 8 21 208 10 193 2.64e-13 72.0
MS.gene72954.t1 AT1G48400 31.633 196 114 8 21 208 10 193 3.69e-13 71.6
MS.gene72954.t1 AT2G04230 26.186 485 269 20 14 451 6 448 3.73e-13 71.6
MS.gene72954.t1 AT1G55030 23.963 434 243 17 15 412 13 395 4.35e-13 71.2
MS.gene72954.t1 AT1G55030 23.963 434 243 17 15 412 3 385 5.06e-13 70.9
MS.gene72954.t1 AT5G53635 25.431 464 270 20 22 448 1 425 8.03e-13 70.5
MS.gene72954.t1 AT3G49030 26.464 461 249 22 16 448 16 414 1.44e-12 69.7
MS.gene72954.t1 AT1G66300 24.512 461 277 19 21 446 29 453 1.65e-12 69.7
MS.gene72954.t1 AT3G26930 26.844 488 239 19 21 452 21 446 1.96e-12 69.3
MS.gene72954.t1 AT5G56440 35.468 203 92 11 21 208 2 180 3.00e-12 68.6
MS.gene72954.t1 AT1G05080 25.714 455 282 18 21 448 13 438 3.82e-12 68.6
MS.gene72954.t1 AT5G18780 31.795 195 114 8 21 212 11 189 4.47e-12 67.8
MS.gene72954.t1 AT5G18780 31.795 195 114 8 21 212 11 189 4.47e-12 67.8
MS.gene72954.t1 AT1G60400 29.756 205 110 7 21 212 14 197 5.22e-12 67.8
MS.gene72954.t1 AT3G62440 27.830 212 120 5 21 212 2 200 8.64e-12 67.4
MS.gene72954.t1 AT3G59150 32.967 182 98 8 20 192 12 178 9.19e-12 67.4
MS.gene72954.t1 AT1G56610 33.854 192 103 9 26 208 15 191 9.97e-12 67.4
MS.gene72954.t1 AT3G51530 27.312 465 261 23 21 449 30 453 1.26e-11 67.0
MS.gene72954.t1 AT5G56410 29.612 206 114 8 28 213 10 204 1.43e-11 67.0
MS.gene72954.t1 AT3G59000 33.858 127 68 4 21 140 2 119 1.43e-11 66.2
MS.gene72954.t1 AT4G22280 30.653 199 113 7 21 212 2 182 1.50e-11 65.9
MS.gene72954.t1 AT5G35995 30.769 195 110 8 21 208 5 181 1.63e-11 66.6
MS.gene72954.t1 AT5G35995 30.769 195 110 8 21 208 5 181 1.63e-11 66.6
MS.gene72954.t1 AT4G22280 30.653 199 113 7 21 212 2 182 1.65e-11 66.2
MS.gene72954.t1 AT1G56610 33.854 192 103 9 26 208 78 254 1.96e-11 66.6
MS.gene72954.t1 AT1G13570 31.401 207 106 10 21 214 6 189 2.57e-11 65.9
MS.gene72954.t1 AT1G13570 31.401 207 106 10 21 214 6 189 2.57e-11 65.9
MS.gene72954.t1 AT5G18770 26.552 467 286 19 21 454 24 466 2.65e-11 65.9
MS.gene72954.t1 AT1G13570 31.401 207 106 10 21 214 6 189 3.27e-11 64.3
MS.gene72954.t1 AT3G26922 30.337 178 92 7 44 210 7 163 5.62e-11 63.5
MS.gene72954.t1 AT3G26922 30.337 178 92 7 44 210 7 163 5.62e-11 63.5
MS.gene72954.t1 AT5G56560 29.381 194 119 5 23 213 7 185 6.83e-11 64.7

Find 99 sgRNAs with CRISPR-Local

Find 156 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTCCAAGTGAAATTGTTAT+TGG 0.238664 8.3:+41903721 None:intergenic
TGCAGATGATGACATGTTTC+TGG 0.246801 8.3:-41905107 MS.gene72954:CDS
AGGTGAGATTCAAGACATTT+TGG 0.257822 8.3:+41903103 None:intergenic
GATTGTTGATACGGAGGTTT+TGG 0.266033 8.3:+41905318 None:intergenic
GAAACTCCACCATGTCCTTT+TGG 0.274770 8.3:-41903861 MS.gene72954:CDS
TGATGTAAATTGCAAAATTC+TGG 0.292545 8.3:+41903365 None:intergenic
CTCGCCGCTGGCGCCATCTC+TGG 0.310072 8.3:-41905285 MS.gene72954:CDS
TGTGGCTCCCATGTTCTTAA+AGG 0.320804 8.3:+41903139 None:intergenic
TTGGTAAATTTCAAACTCTT+GGG 0.324937 8.3:+41903740 None:intergenic
ATTGGTAAATTTCAAACTCT+TGG 0.326362 8.3:+41903739 None:intergenic
ATGTGGCTCAATGCTGTTAA+TGG 0.338769 8.3:-41905070 MS.gene72954:CDS
AATTCCTATGTCGGGATAAC+AGG 0.348689 8.3:+41903682 None:intergenic
TCAATTGTTGCCCTTCTCTC+TGG 0.354482 8.3:-41903836 MS.gene72954:CDS
TCTCATAAGTCAGAGCAATA+AGG 0.376352 8.3:-41903267 MS.gene72954:intron
TCTCTCTCGTTTCTCGCCGC+TGG 0.398888 8.3:-41905297 MS.gene72954:CDS
CTGACTTATGTTCACATAGA+AGG 0.406124 8.3:-41903082 MS.gene72954:CDS
CTTCATATATATCTCTAGTT+CGG 0.413575 8.3:+41903558 None:intergenic
GAGCAGTTGAAGAGAGAAGA+AGG 0.426040 8.3:+41904983 None:intergenic
TGACGGTGCAATCTATTTGA+AGG 0.429149 8.3:-41903924 MS.gene72954:CDS
CGGGTGTTCGCAGTAACAAT+TGG 0.430664 8.3:+41905225 None:intergenic
TTGAAACACTGCAGTCTTGA+CGG 0.431575 8.3:-41903941 MS.gene72954:intron
TTCGGAGGTTGTAGAGAATA+GGG 0.436850 8.3:+41903576 None:intergenic
TTCGAATGTCGCGGGATTCG+CGG 0.443894 8.3:+41905152 None:intergenic
TCCCATGTTCTTAAAGGTGA+TGG 0.457043 8.3:+41903145 None:intergenic
TGGCTAATTGCATTGATATG+TGG 0.457305 8.3:-41905087 MS.gene72954:CDS
GACGCAGCCGTGTCTCCTTA+AGG 0.460023 8.3:-41902884 None:intergenic
GTTCGGAGGTTGTAGAGAAT+AGG 0.465725 8.3:+41903575 None:intergenic
TGAAGAGAGAAGAAGGGAAG+AGG 0.468378 8.3:+41904990 None:intergenic
GTTCACATAGAAGGATATCA+AGG 0.472172 8.3:-41903073 MS.gene72954:CDS
CTTCAGTGAAGGAAAATAAA+CGG 0.476012 8.3:+41903889 None:intergenic
TTATGAGAACTTGAAGCATA+TGG 0.476990 8.3:+41903282 None:intergenic
GCTCCAACCTCGTCTCTCTC+AGG 0.490628 8.3:-41904964 MS.gene72954:intron
GCCAATGTAATTCCTATGTC+GGG 0.493069 8.3:+41903674 None:intergenic
GGGCAACAATTGAGTCCAAA+AGG 0.494834 8.3:+41903846 None:intergenic
CATGGGGCAGCCAGAGAGAA+GGG 0.495273 8.3:+41903826 None:intergenic
CTTCTATGTGAACATAAGTC+AGG 0.496958 8.3:+41903083 None:intergenic
AACGAGAGAGATTGTTGATA+CGG 0.510527 8.3:+41905309 None:intergenic
CAAAAGATTCGAGTTAAAGC+AGG 0.513150 8.3:+41903325 None:intergenic
AGCAGTTGAAGAGAGAAGAA+GGG 0.517841 8.3:+41904984 None:intergenic
GCATGGGGCAGCCAGAGAGA+AGG 0.524254 8.3:+41903825 None:intergenic
GGATTCGCGGAGGGCGAAGA+CGG 0.525359 8.3:+41905165 None:intergenic
ATTGAAGATGCTTCCAGAGA+TGG 0.526620 8.3:+41905272 None:intergenic
TGGTAAATTTCAAACTCTTG+GGG 0.526740 8.3:+41903741 None:intergenic
TCAAGGATTTGAAGATGAGC+TGG 0.532840 8.3:-41903056 MS.gene72954:CDS
TTACCAATAACAATTTCACT+TGG 0.535050 8.3:-41903724 MS.gene72954:CDS
GAACAAAACGACGTCGTCAT+CGG 0.535611 8.3:-41905400 MS.gene72954:CDS
ATATCAAAAGTTTCGAGCAT+GGG 0.539933 8.3:+41903809 None:intergenic
ACGCAGCTTTCGAATGTCGC+GGG 0.545435 8.3:+41905144 None:intergenic
GGCCAATGTAATTCCTATGT+CGG 0.551371 8.3:+41903673 None:intergenic
AACCATCACCTTTAAGAACA+TGG 0.553947 8.3:-41903147 MS.gene72954:CDS
CGAAAGCTGCGTCTCAAATG+TGG 0.557588 8.3:-41905133 MS.gene72954:CDS
GTAACAATTGGAGTCGGAGT+CGG 0.559467 8.3:+41905237 None:intergenic
TTTGGAACTGTTGTTGACTG+TGG 0.559593 8.3:+41903121 None:intergenic
ATGTGGCAGAGTATAGAGTC+TGG 0.559921 8.3:+41905358 None:intergenic
GATTCCTGTTATCCCGACAT+AGG 0.564203 8.3:-41903686 MS.gene72954:CDS
GCTTCCAGAGATGGCGCCAG+CGG 0.565504 8.3:+41905281 None:intergenic
GGGAGGTAGTGGTACACCAT+TGG 0.568804 8.3:+41903763 None:intergenic
CCACGCTCTGCAAGTTGTCA+AGG 0.570001 8.3:+41903648 None:intergenic
GACAGAGCCCCTTGGTACAT+CGG 0.570357 8.3:+41902925 None:intergenic
GGTAAATTTCAAACTCTTGG+GGG 0.573188 8.3:+41903742 None:intergenic
CATATATATCTCTAGTTCGG+AGG 0.581680 8.3:+41903561 None:intergenic
AAGATTAGCCGATGTACCAA+GGG 0.582750 8.3:-41902933 MS.gene72954:CDS
ATACCTGAGAGAGACGAGGT+TGG 0.584623 8.3:+41904961 None:intergenic
AATATCAAAAGTTTCGAGCA+TGG 0.586764 8.3:+41903808 None:intergenic
TTCTGGATGATTTAAAACTG+CGG 0.592985 8.3:+41903382 None:intergenic
GAGAGACAGATCAACAAGGT+GGG 0.594284 8.3:+41905045 None:intergenic
GGTGTTGACGAAGGATGCAA+AGG 0.595972 8.3:+41905186 None:intergenic
GAATGTCGCGGGATTCGCGG+AGG 0.597017 8.3:+41905155 None:intergenic
ACCATCACCTTTAAGAACAT+GGG 0.597069 8.3:-41903146 MS.gene72954:CDS
GCAGAGTATAGAGTCTGGTA+AGG 0.599401 8.3:+41905363 None:intergenic
TTGCATGTGACAGAGCCCCT+TGG 0.600815 8.3:+41902917 None:intergenic
CCTTGACAACTTGCAGAGCG+TGG 0.603355 8.3:-41903648 MS.gene72954:CDS
AAAGATTAGCCGATGTACCA+AGG 0.604504 8.3:-41902934 MS.gene72954:CDS
AATGTCGCGGGATTCGCGGA+GGG 0.606038 8.3:+41905156 None:intergenic
TCCCGACATAGGAATTACAT+TGG 0.608308 8.3:-41903675 MS.gene72954:CDS
GTAAATTTCAAACTCTTGGG+GGG 0.608751 8.3:+41903743 None:intergenic
AGTTTCAGCATCTTCAGTGA+AGG 0.610713 8.3:+41903878 None:intergenic
CAATTGAGTCCAAAAGGACA+TGG 0.611473 8.3:+41903852 None:intergenic
GAGAGAGATTGTTGATACGG+AGG 0.615530 8.3:+41905312 None:intergenic
AGAGACAGATCAACAAGGTG+GGG 0.620971 8.3:+41905046 None:intergenic
GACGCAGCTTTCGAATGTCG+CGG 0.621237 8.3:+41905143 None:intergenic
AAAAGATTCGAGTTAAAGCA+GGG 0.621713 8.3:+41903326 None:intergenic
GGCGAAGACGGTGTTGACGA+AGG 0.622034 8.3:+41905177 None:intergenic
TATCAAAAGTTTCGAGCATG+GGG 0.622663 8.3:+41903810 None:intergenic
TTCGCAGTAACAATTGGAGT+CGG 0.623591 8.3:+41905231 None:intergenic
GCTGCGTCATTCGACATCAA+AGG 0.623855 8.3:-41903516 MS.gene72954:intron
TTGAGAGGAATGAAAGGATG+TGG 0.635310 8.3:+41905341 None:intergenic
GCTCTGCAAGTTGTCAAGGA+CGG 0.642771 8.3:+41903652 None:intergenic
TTTAAAACTGCGGTGTGAGG+TGG 0.655264 8.3:+41903392 None:intergenic
TGACAACTTGCAGAGCGTGG+TGG 0.655980 8.3:-41903645 MS.gene72954:CDS
TGATTTAAAACTGCGGTGTG+AGG 0.659188 8.3:+41903389 None:intergenic
AAGAAAGAGAAACATTTATG+CGG 0.668329 8.3:-41903538 MS.gene72954:CDS
GTTTGCACCTTAAGGAGACA+CGG 0.678298 8.3:+41902877 None:intergenic
TTGAGTCCAAAAGGACATGG+TGG 0.681011 8.3:+41903855 None:intergenic
TACACCATTGGTAAAAGATG+TGG 0.685489 8.3:+41903775 None:intergenic
CGGTGAGAGACAGATCAACA+AGG 0.685615 8.3:+41905041 None:intergenic
TGAGAGACAGATCAACAAGG+TGG 0.688449 8.3:+41905044 None:intergenic
AGATTAGCCGATGTACCAAG+GGG 0.736672 8.3:-41902932 MS.gene72954:CDS
TAAGATACCTGAGAGAGACG+AGG 0.739106 8.3:+41904957 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTCAATTAAGATTAT+AGG - chr8.3:41903652-41903671 MS.gene72954:CDS 10.0%
!!! TTTTTTCAATTAAGATTATA+GGG - chr8.3:41903653-41903672 MS.gene72954:CDS 10.0%
!!! TATTTTTGTTGATATTTCAA+TGG - chr8.3:41905338-41905357 MS.gene72954:CDS 15.0%
!!! TTTTTAATTCATTAAGTGAT+TGG + chr8.3:41904042-41904061 None:intergenic 15.0%
!!! TTTTTCAATTAAGATTATAG+GGG - chr8.3:41903654-41903673 MS.gene72954:CDS 15.0%
!! AAAAACATCTAGCAAATATA+GGG + chr8.3:41903878-41903897 None:intergenic 20.0%
!! AGTTTAATTGAATCAATCTT+TGG - chr8.3:41905093-41905112 MS.gene72954:CDS 20.0%
!! CAAGTAGCTTATAAAAAAAA+TGG - chr8.3:41903728-41903747 MS.gene72954:CDS 20.0%
!!! AACAAATTTATTTTCAGATG+GGG + chr8.3:41904724-41904743 None:intergenic 20.0%
!!! AATTTGTTTGGTAAAAACTA+GGG - chr8.3:41903436-41903455 MS.gene72954:intron 20.0%
!!! AGATTATCATTTTTTAAAGG+TGG - chr8.3:41904243-41904262 MS.gene72954:intron 20.0%
!!! CAACAAATTTATTTTCAGAT+GGG + chr8.3:41904725-41904744 None:intergenic 20.0%
!!! GAAGTTTTTACTGTTATTTT+TGG - chr8.3:41904830-41904849 MS.gene72954:intron 20.0%
!!! GGTAGATTATCATTTTTTAA+AGG - chr8.3:41904240-41904259 MS.gene72954:intron 20.0%
!!! TATATTTGCTAGATGTTTTT+CGG - chr8.3:41903878-41903897 MS.gene72954:CDS 20.0%
!!! TATCACATTATGAATTTGTT+TGG - chr8.3:41903424-41903443 MS.gene72954:intron 20.0%
!!! TCAACAAATTTATTTTCAGA+TGG + chr8.3:41904726-41904745 None:intergenic 20.0%
! AAGAAAGAGAAACATTTATG+CGG - chr8.3:41904784-41904803 MS.gene72954:intron 25.0%
! ATGATTGAATTTGTAGTGTT+CGG - chr8.3:41903559-41903578 MS.gene72954:CDS 25.0%
! ATTGGTAAATTTCAAACTCT+TGG + chr8.3:41904586-41904605 None:intergenic 25.0%
! CTTCATATATATCTCTAGTT+CGG + chr8.3:41904767-41904786 None:intergenic 25.0%
! GAAAAACATCTAGCAAATAT+AGG + chr8.3:41903879-41903898 None:intergenic 25.0%
! TAAGATTATAGGGGTAAAAT+TGG - chr8.3:41903663-41903682 MS.gene72954:CDS 25.0%
! TGATGTAAATTGCAAAATTC+TGG + chr8.3:41904960-41904979 None:intergenic 25.0%
! TTACCAATAACAATTTCACT+TGG - chr8.3:41904598-41904617 MS.gene72954:intron 25.0%
! TTGGTAAATTTCAAACTCTT+GGG + chr8.3:41904585-41904604 None:intergenic 25.0%
!! ACTGCATTACATGATAATTT+TGG + chr8.3:41904295-41904314 None:intergenic 25.0%
!! GAATTTGTTTGGTAAAAACT+AGG - chr8.3:41903435-41903454 MS.gene72954:intron 25.0%
!! GTTGAATATATTTTGCAGAA+CGG - chr8.3:41905294-41905313 MS.gene72954:CDS 25.0%
!!! ATATATTTTTGCCTTGTTTC+TGG - chr8.3:41905145-41905164 MS.gene72954:CDS 25.0%
AATATCAAAAGTTTCGAGCA+TGG + chr8.3:41904517-41904536 None:intergenic 30.0%
AGTCCAAGTGAAATTGTTAT+TGG + chr8.3:41904604-41904623 None:intergenic 30.0%
AGTTCACATTAATTGTATCC+TGG - chr8.3:41903920-41903939 MS.gene72954:CDS 30.0%
ATATCAAAAGTTTCGAGCAT+GGG + chr8.3:41904516-41904535 None:intergenic 30.0%
CTTCAGTGAAGGAAAATAAA+CGG + chr8.3:41904436-41904455 None:intergenic 30.0%
GTAACCATGACAGTTAAAAA+CGG + chr8.3:41903304-41903323 None:intergenic 30.0%
GTATCTGTTGTCTATAACAT+AGG - chr8.3:41904219-41904238 MS.gene72954:intron 30.0%
TGGTAAATTTCAAACTCTTG+GGG + chr8.3:41904584-41904603 None:intergenic 30.0%
TTATGAGAACTTGAAGCATA+TGG + chr8.3:41905043-41905062 None:intergenic 30.0%
! AAAAGATTCGAGTTAAAGCA+GGG + chr8.3:41904999-41905018 None:intergenic 30.0%
! GCTAGCTTATAATTATGAAG+AGG - chr8.3:41903598-41903617 MS.gene72954:CDS 30.0%
! TAGCAAATATAGGGTTTGTT+TGG + chr8.3:41903869-41903888 None:intergenic 30.0%
! TTCTGGATGATTTAAAACTG+CGG + chr8.3:41904943-41904962 None:intergenic 30.0%
AACGAGAGAGATTGTTGATA+CGG + chr8.3:41903016-41903035 None:intergenic 35.0%
AGAAAGTGACGTTTACCAAA+CGG - chr8.3:41903784-41903803 MS.gene72954:CDS 35.0%
CTGACTTATGTTCACATAGA+AGG - chr8.3:41905240-41905259 MS.gene72954:CDS 35.0%
CTTCTATGTGAACATAAGTC+AGG + chr8.3:41905242-41905261 None:intergenic 35.0%
GCTGATAAGTTACATTGTAG+CGG - chr8.3:41903463-41903482 MS.gene72954:intron 35.0%
GGTAAATTTCAAACTCTTGG+GGG + chr8.3:41904583-41904602 None:intergenic 35.0%
GTAAATTTCAAACTCTTGGG+GGG + chr8.3:41904582-41904601 None:intergenic 35.0%
GTTCACATAGAAGGATATCA+AGG - chr8.3:41905249-41905268 MS.gene72954:CDS 35.0%
TAAATTATTACCGCTGTCTG+CGG - chr8.3:41904183-41904202 MS.gene72954:intron 35.0%
TACACCATTGGTAAAAGATG+TGG + chr8.3:41904550-41904569 None:intergenic 35.0%
TATCAAAAGTTTCGAGCATG+GGG + chr8.3:41904515-41904534 None:intergenic 35.0%
TCACACCTCATTAATTGATG+TGG - chr8.3:41904073-41904092 MS.gene72954:intron 35.0%
TCTCATAAGTCAGAGCAATA+AGG - chr8.3:41905055-41905074 MS.gene72954:CDS 35.0%
TTGAATGTAACTACATCCGT+CGG + chr8.3:41903960-41903979 None:intergenic 35.0%
! AACCATCACCTTTAAGAACA+TGG - chr8.3:41905175-41905194 MS.gene72954:CDS 35.0%
! AATATAGGGTTTGTTTGGCA+AGG + chr8.3:41903864-41903883 None:intergenic 35.0%
! ACCATCACCTTTAAGAACAT+GGG - chr8.3:41905176-41905195 MS.gene72954:CDS 35.0%
! AGGTGAGATTCAAGACATTT+TGG + chr8.3:41905222-41905241 None:intergenic 35.0%
! ATCACCACATCTTTTACCAA+TGG - chr8.3:41904543-41904562 MS.gene72954:intron 35.0%
! CAAAAGATTCGAGTTAAAGC+AGG + chr8.3:41905000-41905019 None:intergenic 35.0%
! CATATATATCTCTAGTTCGG+AGG + chr8.3:41904764-41904783 None:intergenic 35.0%
! TGGCTAATTGCATTGATATG+TGG - chr8.3:41903235-41903254 MS.gene72954:intron 35.0%
!! CGTTTTGTTCTTCTGCTTTT+TGG + chr8.3:41902912-41902931 None:intergenic 35.0%
!! TTTTGGTTGAGAGGAATGAA+AGG + chr8.3:41902990-41903009 None:intergenic 35.0%
!!! AAGGTTTTGAAGAGTTGTTG+CGG + chr8.3:41903120-41903139 None:intergenic 35.0%
!!! ATTTTTGCCTTGTTTCTGGT+AGG - chr8.3:41905149-41905168 MS.gene72954:CDS 35.0%
AATTCCTATGTCGGGATAAC+AGG + chr8.3:41904643-41904662 None:intergenic 40.0%
AGCAGTTGAAGAGAGAAGAA+GGG + chr8.3:41903341-41903360 None:intergenic 40.0%
AGTGATTGGCAACACATCAT+TGG + chr8.3:41904028-41904047 None:intergenic 40.0%
AGTTTCAGCATCTTCAGTGA+AGG + chr8.3:41904447-41904466 None:intergenic 40.0%
ATGTGGCTCAATGCTGTTAA+TGG - chr8.3:41903252-41903271 MS.gene72954:intron 40.0%
ATTGAAGATGCTTCCAGAGA+TGG + chr8.3:41903053-41903072 None:intergenic 40.0%
CAATTGAGTCCAAAAGGACA+TGG + chr8.3:41904473-41904492 None:intergenic 40.0%
CCTCATTAATTGATGTGGCA+AGG - chr8.3:41904078-41904097 MS.gene72954:intron 40.0%
CCTTGCCACATCAATTAATG+AGG + chr8.3:41904081-41904100 None:intergenic 40.0%
GAAAGTGACGTTTACCAAAC+GGG - chr8.3:41903785-41903804 MS.gene72954:CDS 40.0%
GCCAATGTAATTCCTATGTC+GGG + chr8.3:41904651-41904670 None:intergenic 40.0%
GGCCAATGTAATTCCTATGT+CGG + chr8.3:41904652-41904671 None:intergenic 40.0%
TCAAGGATTTGAAGATGAGC+TGG - chr8.3:41905266-41905285 MS.gene72954:CDS 40.0%
TCCCATGTTCTTAAAGGTGA+TGG + chr8.3:41905180-41905199 None:intergenic 40.0%
TCCCGACATAGGAATTACAT+TGG - chr8.3:41904647-41904666 MS.gene72954:intron 40.0%
TGACGGTGCAATCTATTTGA+AGG - chr8.3:41904398-41904417 MS.gene72954:intron 40.0%
TGCAGATGATGACATGTTTC+TGG - chr8.3:41903215-41903234 MS.gene72954:intron 40.0%
TGTAGCTGATAGCTGATAAG+CGG - chr8.3:41903504-41903523 MS.gene72954:intron 40.0%
TTCGCAGTAACAATTGGAGT+CGG + chr8.3:41903094-41903113 None:intergenic 40.0%
TTCGGAGGTTGTAGAGAATA+GGG + chr8.3:41904749-41904768 None:intergenic 40.0%
TTGAAACACTGCAGTCTTGA+CGG - chr8.3:41904381-41904400 MS.gene72954:intron 40.0%
TTGAGAGGAATGAAAGGATG+TGG + chr8.3:41902984-41903003 None:intergenic 40.0%
! AAAGATTAGCCGATGTACCA+AGG - chr8.3:41905388-41905407 MS.gene72954:CDS 40.0%
! AAGATTAGCCGATGTACCAA+GGG - chr8.3:41905389-41905408 MS.gene72954:CDS 40.0%
! GATTGTTGATACGGAGGTTT+TGG + chr8.3:41903007-41903026 None:intergenic 40.0%
! TGATTTAAAACTGCGGTGTG+AGG + chr8.3:41904936-41904955 None:intergenic 40.0%
! TTGTTGTTGTGTACAAGCAG+TGG - chr8.3:41904907-41904926 MS.gene72954:intron 40.0%
! TTTGGAACTGTTGTTGACTG+TGG + chr8.3:41905204-41905223 None:intergenic 40.0%
!! CTCACCGTTTTTAACTGTCA+TGG - chr8.3:41903297-41903316 MS.gene72954:CDS 40.0%
!!! AGGTTTTGAAGAGTTGTTGC+GGG + chr8.3:41903119-41903138 None:intergenic 40.0%
!!! CTTCTGCTTTTTGGAGTTTG+AGG + chr8.3:41902903-41902922 None:intergenic 40.0%
AATTTCAAACTCTTGGGGGG+AGG + chr8.3:41904579-41904598 None:intergenic 45.0%
AGAGACAGATCAACAAGGTG+GGG + chr8.3:41903279-41903298 None:intergenic 45.0%
ATGTGGCAGAGTATAGAGTC+TGG + chr8.3:41902967-41902986 None:intergenic 45.0%
ATTGATACTACCGCAGACAG+CGG + chr8.3:41904196-41904215 None:intergenic 45.0%
GAACAAAACGACGTCGTCAT+CGG - chr8.3:41902922-41902941 MS.gene72954:CDS 45.0%
GAGAGACAGATCAACAAGGT+GGG + chr8.3:41903280-41903299 None:intergenic 45.0%
GAGAGAGATTGTTGATACGG+AGG + chr8.3:41903013-41903032 None:intergenic 45.0%
GAGCAGTTGAAGAGAGAAGA+AGG + chr8.3:41903342-41903361 None:intergenic 45.0%
GATTCCTGTTATCCCGACAT+AGG - chr8.3:41904636-41904655 MS.gene72954:intron 45.0%
GCAGAGTATAGAGTCTGGTA+AGG + chr8.3:41902962-41902981 None:intergenic 45.0%
GGGCAACAATTGAGTCCAAA+AGG + chr8.3:41904479-41904498 None:intergenic 45.0%
GTAACAATTGGAGTCGGAGT+CGG + chr8.3:41903088-41903107 None:intergenic 45.0%
GTTCGGAGGTTGTAGAGAAT+AGG + chr8.3:41904750-41904769 None:intergenic 45.0%
TAAGATACCTGAGAGAGACG+AGG + chr8.3:41903368-41903387 None:intergenic 45.0%
TCAATTGTTGCCCTTCTCTC+TGG - chr8.3:41904486-41904505 MS.gene72954:intron 45.0%
TGAAGAGAGAAGAAGGGAAG+AGG + chr8.3:41903335-41903354 None:intergenic 45.0%
TGAGAGACAGATCAACAAGG+TGG + chr8.3:41903281-41903300 None:intergenic 45.0%
TGTGGCTCCCATGTTCTTAA+AGG + chr8.3:41905186-41905205 None:intergenic 45.0%
TTGAGTCCAAAAGGACATGG+TGG + chr8.3:41904470-41904489 None:intergenic 45.0%
! AGATTAGCCGATGTACCAAG+GGG - chr8.3:41905390-41905409 MS.gene72954:CDS 45.0%
! GAAACTCCACCATGTCCTTT+TGG - chr8.3:41904461-41904480 MS.gene72954:intron 45.0%
! TTGACTCGAAAAGACCCGTT+TGG + chr8.3:41903802-41903821 None:intergenic 45.0%
! TTTAAAACTGCGGTGTGAGG+TGG + chr8.3:41904933-41904952 None:intergenic 45.0%
!! TTTGCCTTGTTTCTGGTAGG+AGG - chr8.3:41905152-41905171 MS.gene72954:CDS 45.0%
!!! ATACGGAGGTTTTGGTTGAG+AGG + chr8.3:41902999-41903018 None:intergenic 45.0%
ATACCTGAGAGAGACGAGGT+TGG + chr8.3:41903364-41903383 None:intergenic 50.0%
CGAAAGCTGCGTCTCAAATG+TGG - chr8.3:41903189-41903208 MS.gene72954:intron 50.0%
CGGGTGTTCGCAGTAACAAT+TGG + chr8.3:41903100-41903119 None:intergenic 50.0%
CGGTGAGAGACAGATCAACA+AGG + chr8.3:41903284-41903303 None:intergenic 50.0%
GCTCTGCAAGTTGTCAAGGA+CGG + chr8.3:41904673-41904692 None:intergenic 50.0%
GCTGCGTCATTCGACATCAA+AGG - chr8.3:41904806-41904825 MS.gene72954:intron 50.0%
GGTTCCTCCTACCAGAAACA+AGG + chr8.3:41905159-41905178 None:intergenic 50.0%
!! GGTGTTGACGAAGGATGCAA+AGG + chr8.3:41903139-41903158 None:intergenic 50.0%
AAACTCTTGGGGGGAGGTAG+TGG + chr8.3:41904573-41904592 None:intergenic 55.0%
ACGCAGCTTTCGAATGTCGC+GGG + chr8.3:41903181-41903200 None:intergenic 55.0%
CCACGCTCTGCAAGTTGTCA+AGG + chr8.3:41904677-41904696 None:intergenic 55.0%
CCTTGACAACTTGCAGAGCG+TGG - chr8.3:41904674-41904693 MS.gene72954:intron 55.0%
GACAGAGCCCCTTGGTACAT+CGG + chr8.3:41905400-41905419 None:intergenic 55.0%
GACGCAGCTTTCGAATGTCG+CGG + chr8.3:41903182-41903201 None:intergenic 55.0%
TGACAACTTGCAGAGCGTGG+TGG - chr8.3:41904677-41904696 MS.gene72954:intron 55.0%
TTCGAATGTCGCGGGATTCG+CGG + chr8.3:41903173-41903192 None:intergenic 55.0%
TTGCATGTGACAGAGCCCCT+TGG + chr8.3:41905408-41905427 None:intergenic 55.0%
! GGGAGGTAGTGGTACACCAT+TGG + chr8.3:41904562-41904581 None:intergenic 55.0%
AATGTCGCGGGATTCGCGGA+GGG + chr8.3:41903169-41903188 None:intergenic 60.0%
ACATCCGTCGGTCGTCGAAG+TGG + chr8.3:41903948-41903967 None:intergenic 60.0%
CATGGGGCAGCCAGAGAGAA+GGG + chr8.3:41904499-41904518 None:intergenic 60.0%
GCTCCAACCTCGTCTCTCTC+AGG - chr8.3:41903358-41903377 MS.gene72954:CDS 60.0%
GGTTCCACTTCGACGACCGA+CGG - chr8.3:41903941-41903960 MS.gene72954:intron 60.0%
TCGGTCGTCGAAGTGGAACC+AGG + chr8.3:41903941-41903960 None:intergenic 60.0%
TCTCTCTCGTTTCTCGCCGC+TGG - chr8.3:41903025-41903044 MS.gene72954:CDS 60.0%
!! GGCGAAGACGGTGTTGACGA+AGG + chr8.3:41903148-41903167 None:intergenic 60.0%
GAATGTCGCGGGATTCGCGG+AGG + chr8.3:41903170-41903189 None:intergenic 65.0%
GCATGGGGCAGCCAGAGAGA+AGG + chr8.3:41904500-41904519 None:intergenic 65.0%
GCTTCCAGAGATGGCGCCAG+CGG + chr8.3:41903044-41903063 None:intergenic 65.0%
GGATTCGCGGAGGGCGAAGA+CGG + chr8.3:41903160-41903179 None:intergenic 65.0%
CTCGCCGCTGGCGCCATCTC+TGG - chr8.3:41903037-41903056 MS.gene72954:CDS 75.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 41902886 41905458 41902886 ID=MS.gene72954
chr8.3 mRNA 41902886 41905458 41902886 ID=MS.gene72954.t1;Parent=MS.gene72954
chr8.3 exon 41904965 41905458 41904965 ID=MS.gene72954.t1.exon1;Parent=MS.gene72954.t1
chr8.3 CDS 41904965 41905458 41904965 ID=cds.MS.gene72954.t1;Parent=MS.gene72954.t1
chr8.3 exon 41903517 41903949 41903517 ID=MS.gene72954.t1.exon2;Parent=MS.gene72954.t1
chr8.3 CDS 41903517 41903949 41903517 ID=cds.MS.gene72954.t1;Parent=MS.gene72954.t1
chr8.3 exon 41903268 41903417 41903268 ID=MS.gene72954.t1.exon3;Parent=MS.gene72954.t1
chr8.3 CDS 41903268 41903417 41903268 ID=cds.MS.gene72954.t1;Parent=MS.gene72954.t1
chr8.3 exon 41902886 41903173 41902886 ID=MS.gene72954.t1.exon4;Parent=MS.gene72954.t1
chr8.3 CDS 41902886 41903173 41902886 ID=cds.MS.gene72954.t1;Parent=MS.gene72954.t1
Gene Sequence

>MS.gene72954

ATGGCGGAGTCAATCCTCAAACTCCAAAAAGCAGAAGAACAAAACGACGTCGTCATCGGTGATATCATAAGCACCTTACCAGACTCTATACTCTGCCACATCCTTTCATTCCTCTCAACCAAAACCTCCGTATCAACAATCTCTCTCGTTTCTCGCCGCTGGCGCCATCTCTGGAAGCATCTTCAATCATTCAACTTCTCCGACTCCGACTCCAATTGTTACTGCGAACACCCGCAACAACTCTTCAAAACCTTTGCATCCTTCGTCAACACCGTCTTCGCCCTCCGCGAATCCCGCGACATTCGAAAGCTGCGTCTCAAATGTGGCATTGCAGATGATGACATGTTTCTGGCTAATTGCATTGATATGTGGCTCAATGCTGTTAATGGACCCCACCTTGTTGATCTGTCTCTCACCGTTTTTAACTGTCATGGTTACACTAACTTCCTCTTCCCTTCTTCTCTCTTCAACTGCTCCAACCTCGTCTCTCTCAGGTATCTTAATTTATAGCTTATATCATACTAGATTTTTTTATCACTATCACATTATGAATTTGTTTGGTAAAAACTAGGGAACAGCTGATAAGTTACATTGTAGCGGATAGTTAATAAGTTAGCTTGTAGCTGATAGCTGATAAGCGGAGCTAGCTTATAGTTGATAGCGTATATGTTAGATGATTGAATTTGTAGTGTTCGGTAAAATTAGTGATTGAGCTAGCTTATAATTATGAAGAGGACATGAATAAGATATATTTAATTAATATTTAATTTTTTCAATTAAGATTATAGGGGTAAAATTGGAATGAAATATGATAAGCGTAAGCTTTAAGCTATAAGCTAATTCAAGTAGCTTATAAAAAAAATGGTGTAAGCTAGTAAAAATTAGCTATAAGTTCATGAGAAAGTGACGTTTACCAAACGGGTCTTTTCGAGTCAAATAAGCTTATAAGACATAAGCTATATGCTGAATAAAGTGCCTTGCCAAACAAACCCTATATTTGCTAGATGTTTTTCGGATCACTATCTAGCATAGACAGTTCACATTAATTGTATCCTGGTTCCACTTCGACGACCGACGGATGTAGTTACATTCAAATATGACTTTAATTTATATAGTGTATAAAAGTTTCACACATACATCCAATGATGTGTTGCCAATCACTTAATGAATTAAAAACACGTGACTTGTCACACCTCATTAATTGATGTGGCAAGGCAACACATCATTTGATGCGCGTGTAAAACTTTTGTAAGCTCACAGTGTATATAAATTAAACTTTTCAAATATTTCATTTTGTTAAATTATTACCGCTGTCTGCGGTAGTATCAATGTTGTATCTGTTGTCTATAACATAGGTAGATTATCATTTTTTAAAGGTGGAGATGAAAAGTGAAATCAGTAATATACCAAAATTATCATGTAATGCAGTTCTCGTTATATTTTTAATTGACATGTAAAATTTTTTAGAATGCTTATTTATATAATAGCATATCTTTTGAAACACTGCAGTCTTGACGGTGCAATCTATTTGAAGGTTCAAGATTCTTCCGTTTATTTTCCTTCACTGAAGATGCTGAAACTCCACCATGTCCTTTTGGACTCAATTGTTGCCCTTCTCTCTGGCTGCCCCATGCTCGAAACTTTTGATATTGACTTTATCACCACATCTTTTACCAATGGTGTACCACTACCTCCCCCCAAGAGTTTGAAATTTACCAATAACAATTTCACTTGGACTTACATTGAAGTAGATTCCTGTTATCCCGACATAGGAATTACATTGGCCGTCCTTGACAACTTGCAGAGCGTGGTGGAATCATATCTTGACGTCTTTTCCCCATCTGAAAATAAATTTGTTGACCCTATTCTCTACAACCTCCGAACTAGAGATATATATGAAGAAAGAGAAACATTTATGCGGCTGCGTCATTCGACATCAAAGGTGAAGTTTTTACTGTTATTTTTGGTTTATAGTTTATATGTATGTATGTAGTTTTATTATAATATTGAATCATCACTTCTTGTTGTTGTGTACAAGCAGTGGCCACCTCACACCGCAGTTTTAAATCATCCAGAATTTTGCAATTTACATCATCTAAAGTTGATTCTACCCTGCTTTAACTCGAATCTTTTGCTCAACATGCTTGAGAAATGCCATATGCTTCAAGTTCTCATAAGTCAGAGCAATAAGGTTTGTCTAGTTTTTGAGTTTAATTGAATCAATCTTTGGTCTGTCTATGTATCTATCTAAACACACAAATATATTTTTGCCTTGTTTCTGGTAGGAGGAACCATCACCTTTAAGAACATGGGAGCCACAGTCAACAACAGTTCCAAAATGTCTTGAATCTCACCTGACTTATGTTCACATAGAAGGATATCAAGGATTTGAAGATGAGCTGGCATTTGTTGAATATATTTTGCAGAACGGACTTGTTTTGAAGACAATGCTTATTTTTGTTGATATTTCAATGGACATAACAAAAAAGTATTGTTCTCTCAAAAGATTAGCCGATGTACCAAGGGGCTCTGTCACATGCAAACTTAAATTCGACGCAGCCGTGTCTCCTTAA

Protein sequence

>MS.gene72954.t1

MAESILKLQKAEEQNDVVIGDIISTLPDSILCHILSFLSTKTSVSTISLVSRRWRHLWKHLQSFNFSDSDSNCYCEHPQQLFKTFASFVNTVFALRESRDIRKLRLKCGIADDDMFLANCIDMWLNAVNGPHLVDLSLTVFNCHGYTNFLFPSSLFNCSNLVSLSLDGAIYLKVQDSSVYFPSLKMLKLHHVLLDSIVALLSGCPMLETFDIDFITTSFTNGVPLPPPKSLKFTNNNFTWTYIEVDSCYPDIGITLAVLDNLQSVVESYLDVFSPSENKFVDPILYNLRTRDIYEERETFMRLRHSTSKWPPHTAVLNHPEFCNLHHLKLILPCFNSNLLLNMLEKCHMLQVLISQSNKEEPSPLRTWEPQSTTVPKCLESHLTYVHIEGYQGFEDELAFVEYILQNGLVLKTMLIFVDISMDITKKYCSLKRLADVPRGSVTCKLKFDAAVSP