Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63256.t1 | XP_003628587.2 | 58.9 | 477 | 156 | 12 | 4 | 466 | 466 | 916 | 4.80E-134 | 488 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63256.t1 | Q3EA38 | 28.1 | 455 | 265 | 18 | 22 | 458 | 14 | 424 | 5.7e-19 | 97.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63256.t1 | G7LEM0 | 55.8 | 500 | 164 | 13 | 4 | 466 | 3 | 482 | 3.9e-130 | 474.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63256.t1 | MTR_8g062300 | 55.800 | 500 | 164 | 13 | 4 | 466 | 3 | 482 | 4.34e-167 | 479 |
MS.gene63256.t1 | MTR_8g070950 | 55.882 | 476 | 161 | 12 | 1 | 465 | 1 | 438 | 9.09e-161 | 462 |
MS.gene63256.t1 | MTR_8g062010 | 56.703 | 455 | 157 | 12 | 22 | 465 | 9 | 434 | 7.96e-153 | 441 |
MS.gene63256.t1 | MTR_8g062080 | 53.306 | 484 | 174 | 14 | 1 | 466 | 1 | 450 | 1.07e-150 | 437 |
MS.gene63256.t1 | MTR_8g062310 | 52.052 | 463 | 180 | 10 | 6 | 465 | 9 | 432 | 9.59e-149 | 431 |
MS.gene63256.t1 | MTR_8g469020 | 47.119 | 486 | 184 | 13 | 19 | 465 | 4 | 455 | 1.26e-132 | 391 |
MS.gene63256.t1 | MTR_8g058965 | 47.316 | 503 | 186 | 13 | 1 | 466 | 1 | 461 | 9.30e-132 | 389 |
MS.gene63256.t1 | MTR_4g050250 | 47.085 | 446 | 156 | 18 | 9 | 407 | 8 | 420 | 1.41e-105 | 320 |
MS.gene63256.t1 | MTR_8g467790 | 47.573 | 412 | 126 | 13 | 21 | 406 | 147 | 494 | 3.10e-100 | 310 |
MS.gene63256.t1 | MTR_2g083840 | 36.157 | 484 | 248 | 15 | 6 | 461 | 7 | 457 | 1.03e-73 | 239 |
MS.gene63256.t1 | MTR_2g086020 | 79.310 | 145 | 30 | 0 | 321 | 465 | 175 | 319 | 4.64e-72 | 231 |
MS.gene63256.t1 | MTR_2g086020 | 57.419 | 155 | 60 | 3 | 49 | 202 | 1 | 150 | 6.04e-45 | 159 |
MS.gene63256.t1 | MTR_8g014260 | 37.423 | 489 | 240 | 21 | 1 | 461 | 1 | 451 | 9.83e-72 | 234 |
MS.gene63256.t1 | MTR_8g468810 | 35.861 | 488 | 248 | 17 | 9 | 461 | 6 | 463 | 1.13e-70 | 231 |
MS.gene63256.t1 | MTR_8g062270 | 35.714 | 476 | 233 | 20 | 21 | 460 | 15 | 453 | 1.01e-68 | 226 |
MS.gene63256.t1 | MTR_8g058970 | 34.653 | 505 | 255 | 19 | 3 | 461 | 2 | 477 | 1.25e-65 | 219 |
MS.gene63256.t1 | MTR_8g467800 | 35.934 | 487 | 254 | 17 | 6 | 465 | 2 | 457 | 1.59e-65 | 218 |
MS.gene63256.t1 | MTR_4g032730 | 33.539 | 486 | 244 | 14 | 21 | 460 | 14 | 466 | 2.92e-62 | 209 |
MS.gene63256.t1 | MTR_5g092960 | 33.750 | 480 | 248 | 13 | 18 | 460 | 15 | 461 | 2.21e-56 | 194 |
MS.gene63256.t1 | MTR_8g445780 | 35.955 | 445 | 199 | 18 | 1 | 414 | 1 | 390 | 7.78e-55 | 188 |
MS.gene63256.t1 | MTR_8g468840 | 33.265 | 487 | 258 | 17 | 1 | 459 | 1 | 448 | 2.21e-54 | 188 |
MS.gene63256.t1 | MTR_8g468760 | 33.053 | 475 | 231 | 15 | 15 | 460 | 2 | 418 | 5.26e-53 | 184 |
MS.gene63256.t1 | MTR_8g468810 | 34.761 | 397 | 194 | 16 | 9 | 371 | 6 | 371 | 2.14e-46 | 165 |
MS.gene63256.t1 | MTR_4g024710 | 35.667 | 300 | 171 | 9 | 169 | 461 | 63 | 347 | 2.83e-40 | 148 |
MS.gene63256.t1 | MTR_8g468810 | 37.143 | 315 | 148 | 13 | 9 | 294 | 6 | 299 | 2.79e-38 | 142 |
MS.gene63256.t1 | MTR_8g468810 | 37.261 | 314 | 149 | 13 | 9 | 294 | 6 | 299 | 2.83e-38 | 142 |
MS.gene63256.t1 | MTR_8g468810 | 37.261 | 314 | 149 | 13 | 9 | 294 | 6 | 299 | 3.12e-38 | 142 |
MS.gene63256.t1 | MTR_5g092960 | 33.854 | 384 | 197 | 10 | 18 | 371 | 15 | 371 | 7.06e-36 | 137 |
MS.gene63256.t1 | MTR_8g467800 | 37.419 | 310 | 155 | 15 | 6 | 294 | 2 | 293 | 2.73e-33 | 129 |
MS.gene63256.t1 | MTR_8g014210 | 39.594 | 197 | 103 | 6 | 266 | 461 | 50 | 231 | 5.90e-31 | 119 |
MS.gene63256.t1 | MTR_8g077460 | 44.966 | 149 | 78 | 4 | 314 | 461 | 230 | 375 | 7.48e-31 | 122 |
MS.gene63256.t1 | MTR_8g077460 | 37.885 | 227 | 111 | 11 | 22 | 234 | 10 | 220 | 1.37e-21 | 96.7 |
MS.gene63256.t1 | MTR_4g024745 | 34.602 | 289 | 157 | 12 | 168 | 444 | 16 | 284 | 1.09e-29 | 117 |
MS.gene63256.t1 | MTR_7g098510 | 28.270 | 474 | 244 | 18 | 1 | 461 | 1 | 391 | 8.82e-29 | 117 |
MS.gene63256.t1 | MTR_3g099800 | 62.069 | 87 | 32 | 1 | 373 | 458 | 19 | 105 | 1.56e-27 | 106 |
MS.gene63256.t1 | MTR_7g032380 | 27.912 | 455 | 210 | 19 | 19 | 461 | 8 | 356 | 8.72e-27 | 111 |
MS.gene63256.t1 | MTR_8g014160 | 32.500 | 280 | 149 | 10 | 22 | 278 | 41 | 303 | 8.46e-25 | 106 |
MS.gene63256.t1 | MTR_8g014160 | 54.737 | 95 | 37 | 3 | 369 | 461 | 335 | 425 | 2.41e-20 | 93.6 |
MS.gene63256.t1 | MTR_5g084070 | 27.193 | 456 | 279 | 17 | 12 | 453 | 3 | 419 | 5.85e-23 | 101 |
MS.gene63256.t1 | MTR_7g098480 | 27.254 | 477 | 241 | 18 | 1 | 460 | 1 | 388 | 1.59e-22 | 100 |
MS.gene63256.t1 | MTR_3g108150 | 28.352 | 455 | 235 | 20 | 19 | 460 | 10 | 386 | 1.25e-21 | 96.7 |
MS.gene63256.t1 | MTR_5g021550 | 39.306 | 173 | 81 | 9 | 1 | 160 | 1 | 162 | 1.25e-21 | 91.7 |
MS.gene63256.t1 | MTR_5g080710 | 28.770 | 431 | 252 | 19 | 21 | 433 | 32 | 425 | 3.40e-20 | 93.2 |
MS.gene63256.t1 | MTR_7g056433 | 25.885 | 452 | 249 | 16 | 22 | 461 | 12 | 389 | 3.25e-19 | 89.7 |
MS.gene63256.t1 | MTR_7g032370 | 25.629 | 437 | 230 | 17 | 34 | 461 | 2 | 352 | 1.06e-18 | 87.8 |
MS.gene63256.t1 | MTR_7g056430 | 25.170 | 441 | 229 | 14 | 22 | 453 | 9 | 357 | 3.01e-18 | 88.6 |
MS.gene63256.t1 | MTR_7g056420 | 25.170 | 441 | 229 | 14 | 22 | 453 | 9 | 357 | 3.90e-18 | 88.2 |
MS.gene63256.t1 | MTR_8g014290 | 36.667 | 180 | 75 | 9 | 1 | 161 | 1 | 160 | 3.93e-18 | 82.0 |
MS.gene63256.t1 | MTR_7g033990 | 25.000 | 448 | 243 | 17 | 20 | 454 | 9 | 376 | 2.05e-17 | 84.3 |
MS.gene63256.t1 | MTR_8g014230 | 42.857 | 84 | 46 | 2 | 371 | 454 | 17 | 98 | 5.09e-17 | 77.0 |
MS.gene63256.t1 | MTR_4g093690 | 31.579 | 228 | 127 | 10 | 9 | 225 | 5 | 214 | 2.58e-16 | 79.3 |
MS.gene63256.t1 | MTR_3g467400 | 26.096 | 456 | 230 | 17 | 22 | 461 | 3 | 367 | 4.29e-16 | 80.1 |
MS.gene63256.t1 | MTR_7g056447 | 35.821 | 201 | 103 | 10 | 18 | 211 | 5 | 186 | 4.43e-16 | 79.0 |
MS.gene63256.t1 | MTR_7g007080 | 27.434 | 452 | 232 | 23 | 22 | 454 | 4 | 378 | 5.08e-16 | 80.1 |
MS.gene63256.t1 | MTR_1g041245 | 33.654 | 208 | 112 | 9 | 19 | 218 | 8 | 197 | 1.77e-15 | 78.2 |
MS.gene63256.t1 | MTR_1g041245 | 34.783 | 138 | 80 | 4 | 332 | 461 | 251 | 386 | 1.23e-12 | 69.7 |
MS.gene63256.t1 | MTR_7g115270 | 35.000 | 220 | 106 | 12 | 19 | 220 | 9 | 209 | 5.64e-15 | 77.0 |
MS.gene63256.t1 | MTR_4g039440 | 25.793 | 473 | 242 | 20 | 14 | 461 | 24 | 412 | 1.75e-14 | 75.5 |
MS.gene63256.t1 | MTR_2g007450 | 27.027 | 481 | 258 | 22 | 7 | 458 | 1 | 417 | 2.00e-14 | 75.5 |
MS.gene63256.t1 | MTR_5g083890 | 24.719 | 445 | 235 | 17 | 18 | 431 | 2 | 377 | 2.10e-14 | 75.9 |
MS.gene63256.t1 | MTR_2g007500 | 32.843 | 204 | 100 | 8 | 20 | 214 | 12 | 187 | 2.44e-14 | 74.3 |
MS.gene63256.t1 | MTR_8g085430 | 31.481 | 216 | 117 | 8 | 13 | 214 | 2 | 200 | 2.91e-14 | 73.9 |
MS.gene63256.t1 | MTR_3g107100 | 29.439 | 214 | 123 | 11 | 22 | 225 | 11 | 206 | 5.96e-14 | 73.9 |
MS.gene63256.t1 | MTR_5g073420 | 31.132 | 212 | 124 | 9 | 13 | 216 | 2 | 199 | 2.79e-13 | 71.6 |
MS.gene63256.t1 | MTR_7g034110 | 45.122 | 82 | 41 | 2 | 19 | 100 | 8 | 85 | 3.14e-13 | 71.2 |
MS.gene63256.t1 | MTR_4g024770 | 51.899 | 79 | 29 | 4 | 1 | 79 | 8 | 77 | 3.99e-13 | 65.1 |
MS.gene63256.t1 | MTR_5g061680 | 30.332 | 211 | 123 | 8 | 13 | 215 | 2 | 196 | 5.74e-13 | 70.1 |
MS.gene63256.t1 | MTR_4g024720 | 38.168 | 131 | 63 | 6 | 9 | 131 | 7 | 127 | 9.31e-13 | 67.8 |
MS.gene63256.t1 | MTR_5g008950 | 32.836 | 201 | 100 | 10 | 24 | 214 | 1 | 176 | 1.97e-12 | 68.9 |
MS.gene63256.t1 | MTR_3g107120 | 24.249 | 466 | 257 | 18 | 22 | 465 | 9 | 400 | 2.06e-12 | 68.9 |
MS.gene63256.t1 | MTR_1g095750 | 39.175 | 97 | 55 | 3 | 19 | 115 | 43 | 135 | 2.06e-12 | 65.1 |
MS.gene63256.t1 | MTR_3g099830 | 31.169 | 231 | 120 | 12 | 11 | 229 | 1 | 204 | 5.57e-12 | 67.4 |
MS.gene63256.t1 | MTR_7g055943 | 24.569 | 464 | 246 | 22 | 21 | 461 | 39 | 421 | 9.28e-12 | 67.0 |
MS.gene63256.t1 | MTR_3g105060 | 28.019 | 207 | 136 | 6 | 19 | 224 | 11 | 205 | 9.68e-12 | 66.6 |
MS.gene63256.t1 | MTR_7g034115 | 31.579 | 209 | 119 | 7 | 19 | 220 | 8 | 199 | 1.32e-11 | 66.6 |
MS.gene63256.t1 | MTR_4g056020 | 32.039 | 206 | 110 | 9 | 22 | 215 | 9 | 196 | 1.45e-11 | 66.6 |
MS.gene63256.t1 | MTR_7g098570 | 31.618 | 136 | 83 | 2 | 329 | 457 | 257 | 389 | 2.56e-11 | 65.9 |
MS.gene63256.t1 | MTR_6g044560 | 24.832 | 298 | 152 | 10 | 15 | 271 | 171 | 437 | 2.61e-11 | 66.2 |
MS.gene63256.t1 | MTR_1089s0010 | 28.571 | 203 | 119 | 8 | 21 | 215 | 7 | 191 | 3.20e-11 | 65.1 |
MS.gene63256.t1 | MTR_6g040270 | 30.151 | 199 | 115 | 8 | 24 | 215 | 10 | 191 | 9.12e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63256.t1 | AT4G26340 | 26.850 | 473 | 260 | 16 | 21 | 461 | 1 | 419 | 2.93e-21 | 96.3 |
MS.gene63256.t1 | AT1G32375 | 25.806 | 465 | 278 | 19 | 21 | 461 | 1 | 422 | 5.97e-21 | 95.1 |
MS.gene63256.t1 | AT1G32375 | 25.806 | 465 | 278 | 19 | 21 | 461 | 1 | 422 | 5.97e-21 | 95.1 |
MS.gene63256.t1 | AT4G13965 | 28.571 | 455 | 263 | 19 | 22 | 458 | 10 | 420 | 1.01e-20 | 94.7 |
MS.gene63256.t1 | AT1G78750 | 25.833 | 480 | 295 | 20 | 9 | 458 | 7 | 455 | 2.36e-19 | 90.9 |
MS.gene63256.t1 | AT1G78750 | 25.833 | 480 | 295 | 20 | 9 | 458 | 7 | 455 | 2.36e-19 | 90.9 |
MS.gene63256.t1 | AT4G10400 | 25.272 | 459 | 273 | 16 | 21 | 460 | 1 | 408 | 1.10e-18 | 88.2 |
MS.gene63256.t1 | AT4G10400 | 25.272 | 459 | 273 | 16 | 21 | 460 | 1 | 408 | 1.10e-18 | 88.2 |
MS.gene63256.t1 | AT4G10400 | 25.272 | 459 | 273 | 16 | 21 | 460 | 1 | 408 | 1.10e-18 | 88.2 |
MS.gene63256.t1 | AT5G60610 | 25.117 | 426 | 255 | 19 | 21 | 425 | 1 | 383 | 1.87e-18 | 87.4 |
MS.gene63256.t1 | AT5G60610 | 25.117 | 426 | 255 | 19 | 21 | 425 | 1 | 383 | 1.87e-18 | 87.4 |
MS.gene63256.t1 | AT5G56560 | 26.049 | 453 | 281 | 19 | 23 | 461 | 6 | 418 | 6.55e-17 | 83.2 |
MS.gene63256.t1 | AT1G69630 | 24.790 | 476 | 304 | 14 | 1 | 451 | 1 | 447 | 1.36e-15 | 79.3 |
MS.gene63256.t1 | AT3G26922 | 28.179 | 291 | 171 | 10 | 22 | 307 | 14 | 271 | 1.52e-15 | 77.8 |
MS.gene63256.t1 | AT3G26922 | 28.179 | 291 | 171 | 10 | 22 | 307 | 14 | 271 | 1.52e-15 | 77.8 |
MS.gene63256.t1 | AT1G55030 | 25.542 | 415 | 253 | 18 | 20 | 419 | 7 | 380 | 1.77e-15 | 78.6 |
MS.gene63256.t1 | AT2G26860 | 26.636 | 428 | 256 | 18 | 21 | 425 | 1 | 393 | 1.78e-15 | 78.6 |
MS.gene63256.t1 | AT2G26860 | 26.636 | 428 | 256 | 18 | 21 | 425 | 1 | 393 | 1.78e-15 | 78.6 |
MS.gene63256.t1 | AT1G55030 | 25.060 | 415 | 255 | 17 | 20 | 419 | 17 | 390 | 2.16e-15 | 78.6 |
MS.gene63256.t1 | AT5G22670 | 26.498 | 434 | 250 | 18 | 22 | 424 | 11 | 406 | 3.68e-15 | 77.8 |
MS.gene63256.t1 | AT1G13780 | 24.628 | 471 | 299 | 19 | 19 | 458 | 7 | 452 | 1.39e-14 | 76.3 |
MS.gene63256.t1 | AT1G16930 | 26.446 | 484 | 263 | 21 | 22 | 461 | 15 | 449 | 1.71e-14 | 75.9 |
MS.gene63256.t1 | AT1G16930 | 26.446 | 484 | 263 | 21 | 22 | 461 | 15 | 449 | 1.71e-14 | 75.9 |
MS.gene63256.t1 | AT1G16930 | 26.446 | 484 | 263 | 21 | 22 | 461 | 15 | 449 | 1.71e-14 | 75.9 |
MS.gene63256.t1 | AT5G50270 | 24.726 | 457 | 261 | 16 | 21 | 443 | 1 | 408 | 2.83e-14 | 75.1 |
MS.gene63256.t1 | AT2G26030 | 25.106 | 470 | 284 | 22 | 22 | 458 | 4 | 438 | 6.46e-14 | 73.9 |
MS.gene63256.t1 | AT2G26030 | 25.106 | 470 | 284 | 22 | 22 | 458 | 4 | 438 | 6.46e-14 | 73.9 |
MS.gene63256.t1 | AT4G09920 | 29.515 | 227 | 133 | 9 | 21 | 240 | 1 | 207 | 1.66e-13 | 71.2 |
MS.gene63256.t1 | AT4G09920 | 29.515 | 227 | 133 | 9 | 21 | 240 | 1 | 207 | 1.66e-13 | 71.2 |
MS.gene63256.t1 | AT4G09920 | 29.515 | 227 | 133 | 9 | 21 | 240 | 1 | 207 | 1.66e-13 | 71.2 |
MS.gene63256.t1 | AT3G58920 | 26.749 | 486 | 293 | 21 | 21 | 461 | 1 | 468 | 2.97e-13 | 72.0 |
MS.gene63256.t1 | AT4G09920 | 28.899 | 218 | 129 | 8 | 21 | 231 | 1 | 199 | 3.10e-13 | 70.9 |
MS.gene63256.t1 | AT4G09920 | 28.899 | 218 | 129 | 8 | 21 | 231 | 1 | 199 | 3.10e-13 | 70.9 |
MS.gene63256.t1 | AT2G26030 | 24.947 | 473 | 286 | 23 | 22 | 458 | 4 | 443 | 3.16e-13 | 72.0 |
MS.gene63256.t1 | AT5G56400 | 24.043 | 470 | 282 | 18 | 21 | 461 | 32 | 455 | 3.78e-13 | 71.6 |
MS.gene63256.t1 | AT1G66310 | 25.895 | 475 | 285 | 21 | 9 | 458 | 7 | 439 | 7.94e-13 | 70.5 |
MS.gene63256.t1 | AT5G44950 | 23.758 | 463 | 296 | 18 | 22 | 458 | 4 | 435 | 6.29e-12 | 67.8 |
MS.gene63256.t1 | AT1G13780 | 28.571 | 224 | 130 | 9 | 19 | 229 | 7 | 213 | 7.63e-12 | 67.0 |
MS.gene63256.t1 | AT5G35995 | 28.767 | 219 | 132 | 7 | 22 | 234 | 5 | 205 | 1.02e-11 | 67.4 |
MS.gene63256.t1 | AT5G35995 | 28.767 | 219 | 132 | 7 | 22 | 234 | 5 | 205 | 1.02e-11 | 67.4 |
MS.gene63256.t1 | AT3G59200 | 30.882 | 204 | 111 | 11 | 22 | 212 | 7 | 193 | 1.04e-11 | 66.6 |
MS.gene63256.t1 | AT1G78730 | 27.053 | 207 | 118 | 6 | 10 | 214 | 8 | 183 | 1.08e-11 | 67.0 |
MS.gene63256.t1 | AT5G56440 | 31.884 | 207 | 101 | 11 | 21 | 212 | 1 | 182 | 1.22e-11 | 67.0 |
MS.gene63256.t1 | AT3G59200 | 30.882 | 204 | 111 | 11 | 22 | 212 | 7 | 193 | 1.76e-11 | 66.6 |
MS.gene63256.t1 | AT4G00315 | 31.683 | 202 | 116 | 10 | 21 | 214 | 1 | 188 | 2.07e-11 | 66.2 |
MS.gene63256.t1 | AT5G22700 | 30.579 | 242 | 141 | 9 | 22 | 258 | 43 | 262 | 3.15e-11 | 65.5 |
MS.gene63256.t1 | AT5G56810 | 25.163 | 461 | 277 | 15 | 22 | 458 | 15 | 431 | 3.69e-11 | 65.5 |
MS.gene63256.t1 | AT5G22700 | 30.579 | 242 | 141 | 9 | 22 | 258 | 6 | 225 | 4.02e-11 | 65.5 |
MS.gene63256.t1 | AT5G22700 | 30.579 | 242 | 141 | 9 | 22 | 258 | 6 | 225 | 4.02e-11 | 65.5 |
MS.gene63256.t1 | AT5G22700 | 30.579 | 242 | 141 | 9 | 22 | 258 | 6 | 225 | 4.02e-11 | 65.5 |
MS.gene63256.t1 | AT5G22700 | 30.579 | 242 | 141 | 9 | 22 | 258 | 6 | 225 | 4.02e-11 | 65.5 |
MS.gene63256.t1 | AT5G22700 | 30.579 | 242 | 141 | 9 | 22 | 258 | 43 | 262 | 4.14e-11 | 65.5 |
MS.gene63256.t1 | AT5G53840 | 25.581 | 430 | 262 | 18 | 22 | 431 | 18 | 409 | 5.74e-11 | 64.7 |
MS.gene63256.t1 | AT5G41840 | 26.471 | 272 | 144 | 11 | 22 | 257 | 14 | 265 | 6.30e-11 | 65.1 |
MS.gene63256.t1 | AT1G55660 | 30.000 | 200 | 120 | 8 | 20 | 212 | 51 | 237 | 6.34e-11 | 64.3 |
MS.gene63256.t1 | AT1G55660 | 30.000 | 200 | 120 | 8 | 20 | 212 | 51 | 237 | 6.45e-11 | 64.7 |
MS.gene63256.t1 | AT3G58940 | 28.111 | 217 | 115 | 10 | 21 | 214 | 1 | 199 | 6.53e-11 | 65.1 |
MS.gene63256.t1 | AT3G58940 | 28.111 | 217 | 115 | 10 | 21 | 214 | 1 | 199 | 6.53e-11 | 65.1 |
Find 97 sgRNAs with CRISPR-Local
Find 129 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCCAGGCTGGAGACTTTGC+AGG | 0.207215 | 8.4:+42590970 | MS.gene63256:CDS |
CGTTGGTAACTTTCGTAATA+TGG | 0.215623 | 8.4:+42591141 | MS.gene63256:CDS |
TTTGCGGAACGGACTTGTTT+TGG | 0.289001 | 8.4:+42591819 | MS.gene63256:CDS |
CAACTTTATCTCAATGTTGA+TGG | 0.302931 | 8.4:+42590620 | MS.gene63256:CDS |
TGATGTAAATCGCGAAATTC+AGG | 0.303964 | 8.4:-42591440 | None:intergenic |
GACCCAGATGTTTCTTCTTA+AGG | 0.312024 | 8.4:+42591952 | MS.gene63256:CDS |
GAAATTCACTTCTGGTATCT+TGG | 0.314508 | 8.4:-42591231 | None:intergenic |
TCATCTCTGGAAGGATCTTC+AGG | 0.350215 | 8.4:+42590388 | MS.gene63256:CDS |
ATGTTTCAACTCAAATCTTC+TGG | 0.358687 | 8.4:+42591481 | MS.gene63256:CDS |
TTCTAATACCGCAGTCTTCA+CGG | 0.370164 | 8.4:+42590821 | MS.gene63256:intron |
TCTCGCTGGCTGCCCCAGGC+TGG | 0.373730 | 8.4:+42590958 | MS.gene63256:CDS |
GCTTGTATGAAATTCACTTC+TGG | 0.382431 | 8.4:-42591239 | None:intergenic |
TTACTAATGACGAAACTGTT+TGG | 0.383755 | 8.4:-42590445 | None:intergenic |
TTACCTTAAGAAGAAACATC+TGG | 0.399392 | 8.4:-42591955 | None:intergenic |
TTTGAATGTCGCGGGATTTG+CGG | 0.402806 | 8.4:-42590484 | None:intergenic |
AAGCCTCATAATTAACTTTG+AGG | 0.408476 | 8.4:+42591258 | MS.gene63256:CDS |
CTTGGATGAGGTTGAGAATA+GGG | 0.417120 | 8.4:-42591213 | None:intergenic |
CATCCTCAAAGTTAATTATG+AGG | 0.419080 | 8.4:-42591261 | None:intergenic |
ATATCCTTCTATGTGAATAT+AGG | 0.424387 | 8.4:-42591758 | None:intergenic |
TGGGGAGGAAGGACATGATA+TGG | 0.433088 | 8.4:-42590316 | None:intergenic |
CTGACCTATATTCACATAGA+AGG | 0.433553 | 8.4:+42591754 | MS.gene63256:CDS |
CTTCAGTGATGGAAAATAAA+CGG | 0.436856 | 8.4:-42590885 | None:intergenic |
TCTTTCTCGCTGGCTGCCCC+AGG | 0.439455 | 8.4:+42590954 | MS.gene63256:CDS |
ACCTGCAAAGTCTCCAGCCT+GGG | 0.440076 | 8.4:-42590971 | None:intergenic |
TCTTGGATGAGGTTGAGAAT+AGG | 0.442368 | 8.4:-42591214 | None:intergenic |
CGGCAATGATATCGTGGATC+AGG | 0.446705 | 8.4:+42590919 | MS.gene63256:CDS |
CTCGCAGGTATCTTCATCTC+TGG | 0.455203 | 8.4:+42590375 | MS.gene63256:CDS |
CATCTGGGTCAAATTTAAGT+TGG | 0.462482 | 8.4:-42591939 | None:intergenic |
AATTCAGGATAATTTAGAAC+AGG | 0.463615 | 8.4:-42591425 | None:intergenic |
GAGATAAAGTTGTTGAAGGT+GGG | 0.465366 | 8.4:-42590609 | None:intergenic |
CACTTCTGGTATCTTGGATG+AGG | 0.469527 | 8.4:-42591225 | None:intergenic |
GCCTTTGATCGCCTTCAAAA+CGG | 0.470214 | 8.4:+42590524 | MS.gene63256:CDS |
CCGCTCAACCTGTCGATGAC+AGG | 0.475924 | 8.4:-42590272 | None:intergenic |
GGAAGGTGTCACTAGAACTT+TGG | 0.483436 | 8.4:-42591032 | None:intergenic |
TGAGATAAAGTTGTTGAAGG+TGG | 0.491370 | 8.4:-42590610 | None:intergenic |
CATTGAGATAAAGTTGTTGA+AGG | 0.494116 | 8.4:-42590613 | None:intergenic |
CTTCTATGTGAATATAGGTC+AGG | 0.500493 | 8.4:-42591753 | None:intergenic |
GCACCAACCTCGTTTCCCTC+AGG | 0.500754 | 8.4:+42590678 | MS.gene63256:CDS |
ACATGTCGTCATCGGAAGAA+AGG | 0.508920 | 8.4:-42591003 | None:intergenic |
AGTTACTTTAATATAAATGA+AGG | 0.511759 | 8.4:+42591100 | MS.gene63256:CDS |
TCCGGCTGCCATGTTCTCAA+TGG | 0.513864 | 8.4:-42591697 | None:intergenic |
TTGTTGAAGGTGGGGTCCAA+TGG | 0.515637 | 8.4:-42590600 | None:intergenic |
ATTCACATAGAAGGATATCA+AGG | 0.519668 | 8.4:+42591763 | MS.gene63256:CDS |
CGACAGGTTGAGCGGTCTAC+CGG | 0.520637 | 8.4:+42590280 | MS.gene63256:CDS |
ATTTATATTAAAGTAACTCC+AGG | 0.524406 | 8.4:-42591095 | None:intergenic |
GGATATCAAGCTGTTGGAGC+TGG | 0.525635 | 8.4:-42591056 | None:intergenic |
TCTACAAATTGACTTTCAGC+CGG | 0.526713 | 8.4:-42591190 | None:intergenic |
CTACAAATTGACTTTCAGCC+GGG | 0.527011 | 8.4:-42591189 | None:intergenic |
GCGTGGATACTTGCTGCCAT+TGG | 0.529491 | 8.4:+42590584 | MS.gene63256:CDS |
AAGATTAACAAATGTATCGA+AGG | 0.530416 | 8.4:+42591903 | MS.gene63256:CDS |
AACCTGCAAAGTCTCCAGCC+TGG | 0.539126 | 8.4:-42590972 | None:intergenic |
CCTCAATGGCGGAGGAGTCA+AGG | 0.540811 | 8.4:+42590213 | None:intergenic |
CGATGAGCCTTGTCTCTCGC+AGG | 0.545430 | 8.4:+42590360 | MS.gene63256:CDS |
TTTAGAACAGGTGCATGAGT+TGG | 0.547228 | 8.4:-42591413 | None:intergenic |
CGCTCAACCTGTCGATGACA+GGG | 0.547930 | 8.4:-42590271 | None:intergenic |
AACAACCACCATTGAGAACA+TGG | 0.552420 | 8.4:+42591689 | MS.gene63256:CDS |
TACCTTAAGAAGAAACATCT+GGG | 0.558902 | 8.4:-42591954 | None:intergenic |
CTGAATCACCTCAATGGCGG+AGG | 0.559254 | 8.4:+42590205 | None:intergenic |
AGATAAAGTTGTTGAAGGTG+GGG | 0.559902 | 8.4:-42590608 | None:intergenic |
ACCATTGAGAACATGGCAGC+CGG | 0.564288 | 8.4:+42591696 | MS.gene63256:CDS |
CCGCCGATGACAATTTCACC+TGG | 0.564468 | 8.4:+42591077 | MS.gene63256:CDS |
ATATGGCATAACAACGAGTC+CGG | 0.568277 | 8.4:-42590299 | None:intergenic |
AAGCTGTTGGAGCTGGAGGA+AGG | 0.568970 | 8.4:-42591049 | None:intergenic |
AATATGACCCTGTCATCGAC+AGG | 0.572557 | 8.4:+42590264 | MS.gene63256:CDS |
GAATGTCGCGGGATTTGCGG+AGG | 0.575959 | 8.4:-42590481 | None:intergenic |
GGTCAAAGACATGTCGTCAT+CGG | 0.576120 | 8.4:-42591011 | None:intergenic |
GGCTGCCATGTTCTCAATGG+TGG | 0.577603 | 8.4:-42591694 | None:intergenic |
CTATGTGAATATAGGTCAGG+TGG | 0.580589 | 8.4:-42591750 | None:intergenic |
ATCGGCGGATATCAAGCTGT+TGG | 0.583411 | 8.4:-42591062 | None:intergenic |
TGTGGCATTGCTCAAGACAA+TGG | 0.586966 | 8.4:-42591505 | None:intergenic |
AGAAGATTTGAGTTGAAACA+TGG | 0.586977 | 8.4:-42591479 | None:intergenic |
AGAGACAACATCTTCAGTGA+TGG | 0.590452 | 8.4:-42590896 | None:intergenic |
TGGTAACTTTCGTAATATGG+TGG | 0.590805 | 8.4:+42591144 | MS.gene63256:CDS |
TCAGAAACTCTTGTTGACTC+CGG | 0.591556 | 8.4:-42591715 | None:intergenic |
GTCTCTCGGCAATGATATCG+TGG | 0.594692 | 8.4:+42590913 | MS.gene63256:CDS |
AACTCAAGAATGCTAAAGCG+TGG | 0.596870 | 8.4:+42590567 | MS.gene63256:CDS |
TATCAAGCTGTTGGAGCTGG+AGG | 0.599693 | 8.4:-42591053 | None:intergenic |
GATTTGAGTTGAAACATGGA+AGG | 0.600986 | 8.4:-42591475 | None:intergenic |
TCACTGAAGATGTTGTCTCT+CGG | 0.609046 | 8.4:+42590899 | MS.gene63256:CDS |
AAGGCTCATCGTAGTAGTAA+CGG | 0.612007 | 8.4:-42590348 | None:intergenic |
CAGGTATCTTCATCTCTGGA+AGG | 0.616499 | 8.4:+42590379 | MS.gene63256:CDS |
GTTGCATCATTCGATGTCAA+AGG | 0.618438 | 8.4:+42591294 | MS.gene63256:CDS |
AATGACGAAACTGTTTGGAA+CGG | 0.618639 | 8.4:-42590440 | None:intergenic |
TTACCTGAGGGAAACGAGGT+TGG | 0.622908 | 8.4:-42590681 | None:intergenic |
AGATTAACAAATGTATCGAA+GGG | 0.622978 | 8.4:+42591904 | MS.gene63256:CDS |
ACTCCAGGTGAAATTGTCAT+CGG | 0.626403 | 8.4:-42591080 | None:intergenic |
GATCAAAGGCGAAAGTGAGA+TGG | 0.632265 | 8.4:-42590511 | None:intergenic |
GAAGATACCTGCGAGAGACA+AGG | 0.633083 | 8.4:-42590367 | None:intergenic |
CCTGTCATCGACAGGTTGAG+CGG | 0.637347 | 8.4:+42590272 | MS.gene63256:CDS |
CAATTGATAAAGAGTGAACG+AGG | 0.640528 | 8.4:-42590656 | None:intergenic |
TCTCATAATTCAGAGCAACA+AGG | 0.643040 | 8.4:+42591538 | MS.gene63256:CDS |
TATGTGAATATAGGTCAGGT+GGG | 0.652099 | 8.4:-42591749 | None:intergenic |
CCAGGTGAAATTGTCATCGG+CGG | 0.657457 | 8.4:-42591077 | None:intergenic |
CCTGCAAAGTCTCCAGCCTG+GGG | 0.668022 | 8.4:-42590970 | None:intergenic |
TTATGAGAACTTGAAGCATG+TGG | 0.695487 | 8.4:-42591523 | None:intergenic |
GAAGTTACCTGAGGGAAACG+AGG | 0.701057 | 8.4:-42590685 | None:intergenic |
AATTGATAAAGAGTGAACGA+GGG | 0.746792 | 8.4:-42590655 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATATATTTGTGTACAAA+TGG | - | chr8.4:42591631-42591650 | None:intergenic | 15.0% |
!!! | AGTTACTTTAATATAAATGA+AGG | + | chr8.4:42591100-42591119 | MS.gene63256:CDS | 15.0% |
!! | ATTTATATTAAAGTAACTCC+AGG | - | chr8.4:42591098-42591117 | None:intergenic | 20.0% |
!!! | ACAAATATATTTTTGAGTCA+CGG | + | chr8.4:42591638-42591657 | MS.gene63256:intron | 20.0% |
!!! | ATGTTTTTAAATGTGTAGTT+TGG | + | chr8.4:42591341-42591360 | MS.gene63256:intron | 20.0% |
!!! | ATTTTTTGATGTTTTTTTCC+CGG | + | chr8.4:42591171-42591190 | MS.gene63256:CDS | 20.0% |
!!! | TAATTCAAACATTCTTTTGT+CGG | + | chr8.4:42591580-42591599 | MS.gene63256:intron | 20.0% |
!!! | TGTTTTTGTTGATATTTCAA+TGG | + | chr8.4:42591852-42591871 | MS.gene63256:CDS | 20.0% |
!!! | TTGTTAATCTTTTGATAGAA+CGG | - | chr8.4:42591894-42591913 | None:intergenic | 20.0% |
! | AAGATTAACAAATGTATCGA+AGG | + | chr8.4:42591903-42591922 | MS.gene63256:CDS | 25.0% |
! | AGATTAACAAATGTATCGAA+GGG | + | chr8.4:42591904-42591923 | MS.gene63256:CDS | 25.0% |
! | ATATCCTTCTATGTGAATAT+AGG | - | chr8.4:42591761-42591780 | None:intergenic | 25.0% |
!! | AATTCAGGATAATTTAGAAC+AGG | - | chr8.4:42591428-42591447 | None:intergenic | 25.0% |
!!! | AAATGAAGGACGTTTTAAAT+TGG | + | chr8.4:42591114-42591133 | MS.gene63256:CDS | 25.0% |
!!! | AAGGTGAAGTTTTACTTTTA+TGG | + | chr8.4:42591313-42591332 | MS.gene63256:intron | 25.0% |
!!! | AATGAAGGACGTTTTAAATT+GGG | + | chr8.4:42591115-42591134 | MS.gene63256:CDS | 25.0% |
!!! | CATTTGCTGAATATATTTTG+CGG | + | chr8.4:42591803-42591822 | MS.gene63256:CDS | 25.0% |
AAGCCTCATAATTAACTTTG+AGG | + | chr8.4:42591258-42591277 | MS.gene63256:CDS | 30.0% | |
AATTGATAAAGAGTGAACGA+GGG | - | chr8.4:42590658-42590677 | None:intergenic | 30.0% | |
ATGTTTCAACTCAAATCTTC+TGG | + | chr8.4:42591481-42591500 | MS.gene63256:CDS | 30.0% | |
ATTCACATAGAAGGATATCA+AGG | + | chr8.4:42591763-42591782 | MS.gene63256:CDS | 30.0% | |
CAACTTTATCTCAATGTTGA+TGG | + | chr8.4:42590620-42590639 | MS.gene63256:CDS | 30.0% | |
CATCCTCAAAGTTAATTATG+AGG | - | chr8.4:42591264-42591283 | None:intergenic | 30.0% | |
CATTGAGATAAAGTTGTTGA+AGG | - | chr8.4:42590616-42590635 | None:intergenic | 30.0% | |
TAAAAACAGAAGTTACCTGA+GGG | - | chr8.4:42590696-42590715 | None:intergenic | 30.0% | |
TTAAAAACAGAAGTTACCTG+AGG | - | chr8.4:42590697-42590716 | None:intergenic | 30.0% | |
TTACTAATGACGAAACTGTT+TGG | - | chr8.4:42590448-42590467 | None:intergenic | 30.0% | |
TTCAAAAGTGAAAGTGAGTT+TGG | - | chr8.4:42590792-42590811 | None:intergenic | 30.0% | |
! | CTTCAGTGATGGAAAATAAA+CGG | - | chr8.4:42590888-42590907 | None:intergenic | 30.0% |
! | TTTTAATCCCATCTAATTGC+AGG | + | chr8.4:42590723-42590742 | MS.gene63256:intron | 30.0% |
!! | AGAAGATTTGAGTTGAAACA+TGG | - | chr8.4:42591482-42591501 | None:intergenic | 30.0% |
AATGACGAAACTGTTTGGAA+CGG | - | chr8.4:42590443-42590462 | None:intergenic | 35.0% | |
AGATAAAGTTGTTGAAGGTG+GGG | - | chr8.4:42590611-42590630 | None:intergenic | 35.0% | |
ATGAGTATCCTGCAATTAGA+TGG | - | chr8.4:42590734-42590753 | None:intergenic | 35.0% | |
CAATTGATAAAGAGTGAACG+AGG | - | chr8.4:42590659-42590678 | None:intergenic | 35.0% | |
CATCTGGGTCAAATTTAAGT+TGG | - | chr8.4:42591942-42591961 | None:intergenic | 35.0% | |
CTGACCTATATTCACATAGA+AGG | + | chr8.4:42591754-42591773 | MS.gene63256:CDS | 35.0% | |
CTTCTATGTGAATATAGGTC+AGG | - | chr8.4:42591756-42591775 | None:intergenic | 35.0% | |
GAAATTCACTTCTGGTATCT+TGG | - | chr8.4:42591234-42591253 | None:intergenic | 35.0% | |
GAGATAAAGTTGTTGAAGGT+GGG | - | chr8.4:42590612-42590631 | None:intergenic | 35.0% | |
GCTTGTATGAAATTCACTTC+TGG | - | chr8.4:42591242-42591261 | None:intergenic | 35.0% | |
TATGTGAATATAGGTCAGGT+GGG | - | chr8.4:42591752-42591771 | None:intergenic | 35.0% | |
TCTCATAATTCAGAGCAACA+AGG | + | chr8.4:42591538-42591557 | MS.gene63256:CDS | 35.0% | |
TGAGATAAAGTTGTTGAAGG+TGG | - | chr8.4:42590613-42590632 | None:intergenic | 35.0% | |
TGAGTATCCTGCAATTAGAT+GGG | - | chr8.4:42590733-42590752 | None:intergenic | 35.0% | |
TGATGTAAATCGCGAAATTC+AGG | - | chr8.4:42591443-42591462 | None:intergenic | 35.0% | |
TGGTAACTTTCGTAATATGG+TGG | + | chr8.4:42591144-42591163 | MS.gene63256:CDS | 35.0% | |
TTATGAGAACTTGAAGCATG+TGG | - | chr8.4:42591526-42591545 | None:intergenic | 35.0% | |
! | GCTGAATATATTTTGCGGAA+CGG | + | chr8.4:42591808-42591827 | MS.gene63256:CDS | 35.0% |
! | TCTACAAATTGACTTTCAGC+CGG | - | chr8.4:42591193-42591212 | None:intergenic | 35.0% |
!! | AGTAGTAACGGAAGTTTTTG+TGG | - | chr8.4:42590339-42590358 | None:intergenic | 35.0% |
!! | CGTTGGTAACTTTCGTAATA+TGG | + | chr8.4:42591141-42591160 | MS.gene63256:CDS | 35.0% |
!! | GATTTGAGTTGAAACATGGA+AGG | - | chr8.4:42591478-42591497 | None:intergenic | 35.0% |
!! | GTAGTAACGGAAGTTTTTGT+GGG | - | chr8.4:42590338-42590357 | None:intergenic | 35.0% |
!! | TAGTAACGGAAGTTTTTGTG+GGG | - | chr8.4:42590337-42590356 | None:intergenic | 35.0% |
!!! | TATATTTTTGAGTCACGGCT+TGG | + | chr8.4:42591643-42591662 | MS.gene63256:intron | 35.0% |
AACAACCACCATTGAGAACA+TGG | + | chr8.4:42591689-42591708 | MS.gene63256:CDS | 40.0% | |
AACTCAAGAATGCTAAAGCG+TGG | + | chr8.4:42590567-42590586 | MS.gene63256:CDS | 40.0% | |
AAGGCTCATCGTAGTAGTAA+CGG | - | chr8.4:42590351-42590370 | None:intergenic | 40.0% | |
ACTCCAGGTGAAATTGTCAT+CGG | - | chr8.4:42591083-42591102 | None:intergenic | 40.0% | |
AGAGACAACATCTTCAGTGA+TGG | - | chr8.4:42590899-42590918 | None:intergenic | 40.0% | |
ATATGGCATAACAACGAGTC+CGG | - | chr8.4:42590302-42590321 | None:intergenic | 40.0% | |
CTATGTGAATATAGGTCAGG+TGG | - | chr8.4:42591753-42591772 | None:intergenic | 40.0% | |
CTTGGATGAGGTTGAGAATA+GGG | - | chr8.4:42591216-42591235 | None:intergenic | 40.0% | |
GTTGCATCATTCGATGTCAA+AGG | + | chr8.4:42591294-42591313 | MS.gene63256:CDS | 40.0% | |
TCACTGAAGATGTTGTCTCT+CGG | + | chr8.4:42590899-42590918 | MS.gene63256:CDS | 40.0% | |
TCTTGGATGAGGTTGAGAAT+AGG | - | chr8.4:42591217-42591236 | None:intergenic | 40.0% | |
TTCAGAGCAACAAGGTTTGT+TGG | + | chr8.4:42591546-42591565 | MS.gene63256:intron | 40.0% | |
TTCTAATACCGCAGTCTTCA+CGG | + | chr8.4:42590821-42590840 | MS.gene63256:intron | 40.0% | |
TTGTTATCGTGTATGTGCAG+TGG | + | chr8.4:42591390-42591409 | MS.gene63256:intron | 40.0% | |
! | CAAGAACACAACCGTTTTGA+AGG | - | chr8.4:42590538-42590557 | None:intergenic | 40.0% |
! | CTACAAATTGACTTTCAGCC+GGG | - | chr8.4:42591192-42591211 | None:intergenic | 40.0% |
! | TTTAGAACAGGTGCATGAGT+TGG | - | chr8.4:42591416-42591435 | None:intergenic | 40.0% |
!! | CGTTTTAAATTGGGCATCGT+TGG | + | chr8.4:42591124-42591143 | MS.gene63256:CDS | 40.0% |
!! | TCAGAAACTCTTGTTGACTC+CGG | - | chr8.4:42591718-42591737 | None:intergenic | 40.0% |
!!! | ATGGAAGTTTTGAATGTCGC+GGG | - | chr8.4:42590495-42590514 | None:intergenic | 40.0% |
!!! | GATGGAAGTTTTGAATGTCG+CGG | - | chr8.4:42590496-42590515 | None:intergenic | 40.0% |
!!! | GCATTAGTTTTCTTTCTCGC+TGG | + | chr8.4:42590944-42590963 | MS.gene63256:CDS | 40.0% |
AATATGACCCTGTCATCGAC+AGG | + | chr8.4:42590264-42590283 | MS.gene63256:CDS | 45.0% | |
ACATGTCGTCATCGGAAGAA+AGG | - | chr8.4:42591006-42591025 | None:intergenic | 45.0% | |
CACTTCTGGTATCTTGGATG+AGG | - | chr8.4:42591228-42591247 | None:intergenic | 45.0% | |
CAGGTATCTTCATCTCTGGA+AGG | + | chr8.4:42590379-42590398 | MS.gene63256:CDS | 45.0% | |
GATCAAAGGCGAAAGTGAGA+TGG | - | chr8.4:42590514-42590533 | None:intergenic | 45.0% | |
GCCTTTGATCGCCTTCAAAA+CGG | + | chr8.4:42590524-42590543 | MS.gene63256:CDS | 45.0% | |
GGTCAAAGACATGTCGTCAT+CGG | - | chr8.4:42591014-42591033 | None:intergenic | 45.0% | |
GTTCCTCCTATGAGCAACAA+GGG | - | chr8.4:42591672-42591691 | None:intergenic | 45.0% | |
TGTGGCATTGCTCAAGACAA+TGG | - | chr8.4:42591508-42591527 | None:intergenic | 45.0% | |
TGTTCCTCCTATGAGCAACA+AGG | - | chr8.4:42591673-42591692 | None:intergenic | 45.0% | |
TTTGAATGTCGCGGGATTTG+CGG | - | chr8.4:42590487-42590506 | None:intergenic | 45.0% | |
! | TAACGGAAGTTTTTGTGGGG+AGG | - | chr8.4:42590334-42590353 | None:intergenic | 45.0% |
! | TCATCTCTGGAAGGATCTTC+AGG | + | chr8.4:42590388-42590407 | MS.gene63256:CDS | 45.0% |
!! | GGAAGGTGTCACTAGAACTT+TGG | - | chr8.4:42591035-42591054 | None:intergenic | 45.0% |
!! | TTTGCGGAACGGACTTGTTT+TGG | + | chr8.4:42591819-42591838 | MS.gene63256:CDS | 45.0% |
!!! | ACCGTTTTGAAGGCGATCAA+AGG | - | chr8.4:42590528-42590547 | None:intergenic | 45.0% |
ACCATTGAGAACATGGCAGC+CGG | + | chr8.4:42591696-42591715 | MS.gene63256:CDS | 50.0% | |
ATCGGCGGATATCAAGCTGT+TGG | - | chr8.4:42591065-42591084 | None:intergenic | 50.0% | |
CCAGGTGAAATTGTCATCGG+CGG | - | chr8.4:42591080-42591099 | None:intergenic | 50.0% | |
CGATTGAACCGTGAAGACTG+CGG | - | chr8.4:42590832-42590851 | None:intergenic | 50.0% | |
CGGCAATGATATCGTGGATC+AGG | + | chr8.4:42590919-42590938 | MS.gene63256:CDS | 50.0% | |
CTCGCAGGTATCTTCATCTC+TGG | + | chr8.4:42590375-42590394 | MS.gene63256:CDS | 50.0% | |
GAAGATACCTGCGAGAGACA+AGG | - | chr8.4:42590370-42590389 | None:intergenic | 50.0% | |
GAAGTTACCTGAGGGAAACG+AGG | - | chr8.4:42590688-42590707 | None:intergenic | 50.0% | |
GGATATCAAGCTGTTGGAGC+TGG | - | chr8.4:42591059-42591078 | None:intergenic | 50.0% | |
GTCTCTCGGCAATGATATCG+TGG | + | chr8.4:42590913-42590932 | MS.gene63256:CDS | 50.0% | |
TATCAAGCTGTTGGAGCTGG+AGG | - | chr8.4:42591056-42591075 | None:intergenic | 50.0% | |
TGGGGAGGAAGGACATGATA+TGG | - | chr8.4:42590319-42590338 | None:intergenic | 50.0% | |
TGGTGTCCCTTGTTGCTCAT+AGG | + | chr8.4:42591663-42591682 | MS.gene63256:intron | 50.0% | |
TGTCCCTTGTTGCTCATAGG+AGG | + | chr8.4:42591666-42591685 | MS.gene63256:intron | 50.0% | |
TTACCTGAGGGAAACGAGGT+TGG | - | chr8.4:42590684-42590703 | None:intergenic | 50.0% | |
TTGTTGAAGGTGGGGTCCAA+TGG | - | chr8.4:42590603-42590622 | None:intergenic | 50.0% | |
! | GGAAGTTTTTGTGGGGAGGA+AGG | - | chr8.4:42590330-42590349 | None:intergenic | 50.0% |
AACCTGCAAAGTCTCCAGCC+TGG | - | chr8.4:42590975-42590994 | None:intergenic | 55.0% | |
AAGCTGTTGGAGCTGGAGGA+AGG | - | chr8.4:42591052-42591071 | None:intergenic | 55.0% | |
ACCTGCAAAGTCTCCAGCCT+GGG | - | chr8.4:42590974-42590993 | None:intergenic | 55.0% | |
CCGCCGATGACAATTTCACC+TGG | + | chr8.4:42591077-42591096 | MS.gene63256:CDS | 55.0% | |
CGCTCAACCTGTCGATGACA+GGG | - | chr8.4:42590274-42590293 | None:intergenic | 55.0% | |
GGCTGCCATGTTCTCAATGG+TGG | - | chr8.4:42591697-42591716 | None:intergenic | 55.0% | |
TCCGGCTGCCATGTTCTCAA+TGG | - | chr8.4:42591700-42591719 | None:intergenic | 55.0% | |
! | CCTGTCATCGACAGGTTGAG+CGG | + | chr8.4:42590272-42590291 | MS.gene63256:CDS | 55.0% |
! | GCGTGGATACTTGCTGCCAT+TGG | + | chr8.4:42590584-42590603 | MS.gene63256:CDS | 55.0% |
CCGCTCAACCTGTCGATGAC+AGG | - | chr8.4:42590275-42590294 | None:intergenic | 60.0% | |
CCTGCAAAGTCTCCAGCCTG+GGG | - | chr8.4:42590973-42590992 | None:intergenic | 60.0% | |
GAATGTCGCGGGATTTGCGG+AGG | - | chr8.4:42590484-42590503 | None:intergenic | 60.0% | |
GCACCAACCTCGTTTCCCTC+AGG | + | chr8.4:42590678-42590697 | MS.gene63256:CDS | 60.0% | |
! | CGACAGGTTGAGCGGTCTAC+CGG | + | chr8.4:42590280-42590299 | MS.gene63256:CDS | 60.0% |
! | CGATGAGCCTTGTCTCTCGC+AGG | + | chr8.4:42590360-42590379 | MS.gene63256:CDS | 60.0% |
CCCCAGGCTGGAGACTTTGC+AGG | + | chr8.4:42590970-42590989 | MS.gene63256:CDS | 65.0% | |
! | TCTTTCTCGCTGGCTGCCCC+AGG | + | chr8.4:42590954-42590973 | MS.gene63256:CDS | 65.0% |
! | TCTCGCTGGCTGCCCCAGGC+TGG | + | chr8.4:42590958-42590977 | MS.gene63256:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 42590218 | 42591972 | 42590218 | ID=MS.gene63256 |
chr8.4 | mRNA | 42590218 | 42591972 | 42590218 | ID=MS.gene63256.t1;Parent=MS.gene63256 |
chr8.4 | exon | 42590218 | 42590699 | 42590218 | ID=MS.gene63256.t1.exon1;Parent=MS.gene63256.t1 |
chr8.4 | CDS | 42590218 | 42590699 | 42590218 | ID=cds.MS.gene63256.t1;Parent=MS.gene63256.t1 |
chr8.4 | exon | 42590835 | 42591315 | 42590835 | ID=MS.gene63256.t1.exon2;Parent=MS.gene63256.t1 |
chr8.4 | CDS | 42590835 | 42591315 | 42590835 | ID=cds.MS.gene63256.t1;Parent=MS.gene63256.t1 |
chr8.4 | exon | 42591410 | 42591559 | 42591410 | ID=MS.gene63256.t1.exon3;Parent=MS.gene63256.t1 |
chr8.4 | CDS | 42591410 | 42591559 | 42591410 | ID=cds.MS.gene63256.t1;Parent=MS.gene63256.t1 |
chr8.4 | exon | 42591685 | 42591972 | 42591685 | ID=MS.gene63256.t1.exon4;Parent=MS.gene63256.t1 |
chr8.4 | CDS | 42591685 | 42591972 | 42591685 | ID=cds.MS.gene63256.t1;Parent=MS.gene63256.t1 |
Gene Sequence |
Protein sequence |