AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene64989


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene64989.t1 MTR_8g062310 85.747 435 60 2 1 435 1 433 0.0 749
MS.gene64989.t1 MTR_8g070950 58.499 453 148 12 6 435 4 439 5.27e-167 476
MS.gene64989.t1 MTR_8g062080 57.395 453 162 12 1 430 1 445 8.70e-161 461
MS.gene64989.t1 MTR_8g062010 59.198 424 153 9 25 430 9 430 4.98e-154 443
MS.gene64989.t1 MTR_8g469020 51.656 453 174 8 25 435 7 456 1.64e-144 420
MS.gene64989.t1 MTR_8g058965 53.468 447 168 8 24 431 12 457 1.84e-143 417
MS.gene64989.t1 MTR_8g062300 50.728 481 190 12 1 434 1 481 5.78e-140 409
MS.gene64989.t1 MTR_4g050250 50.118 425 158 12 1 376 1 420 1.09e-122 363
MS.gene64989.t1 MTR_8g467790 46.859 382 137 12 24 374 147 493 8.91e-91 284
MS.gene64989.t1 MTR_8g468810 40.987 466 232 14 4 430 2 463 2.16e-86 271
MS.gene64989.t1 MTR_2g083840 39.341 455 237 11 8 430 10 457 7.78e-85 267
MS.gene64989.t1 MTR_8g058970 39.004 482 229 17 6 430 4 477 8.13e-82 260
MS.gene64989.t1 MTR_8g014260 38.780 459 236 16 6 430 4 451 1.26e-80 256
MS.gene64989.t1 MTR_8g467800 37.901 467 245 13 5 435 1 458 2.36e-77 248
MS.gene64989.t1 MTR_4g032730 38.793 464 227 16 19 429 7 466 1.20e-75 244
MS.gene64989.t1 MTR_8g062270 37.885 454 219 15 24 429 15 453 1.32e-75 243
MS.gene64989.t1 MTR_5g092960 35.776 464 234 11 17 429 11 461 2.73e-72 234
MS.gene64989.t1 MTR_8g468840 37.783 442 228 15 25 427 14 447 1.65e-68 224
MS.gene64989.t1 MTR_8g445780 40.049 412 192 20 5 383 1 390 6.27e-67 219
MS.gene64989.t1 MTR_8g468760 36.854 445 208 14 24 429 8 418 1.35e-63 211
MS.gene64989.t1 MTR_8g468810 40.849 377 176 14 4 340 2 371 3.31e-61 203
MS.gene64989.t1 MTR_2g086020 67.123 146 48 0 290 435 175 320 1.09e-58 195
MS.gene64989.t1 MTR_2g086020 47.887 142 65 2 51 184 1 141 5.35e-33 127
MS.gene64989.t1 MTR_8g077460 34.499 429 207 16 19 430 4 375 5.38e-54 184
MS.gene64989.t1 MTR_8g014160 34.967 449 191 16 22 430 38 425 8.67e-53 182
MS.gene64989.t1 MTR_8g468810 42.193 301 141 11 4 274 2 299 4.75e-50 172
MS.gene64989.t1 MTR_8g468810 42.193 301 141 11 4 274 2 299 6.84e-50 172
MS.gene64989.t1 MTR_8g468810 42.193 301 141 11 4 274 2 299 7.77e-50 173
MS.gene64989.t1 MTR_5g092960 35.040 371 184 9 17 340 11 371 4.26e-47 167
MS.gene64989.t1 MTR_4g024710 38.571 280 148 11 170 430 73 347 1.46e-42 153
MS.gene64989.t1 MTR_8g014210 42.291 227 113 7 218 430 9 231 3.31e-41 146
MS.gene64989.t1 MTR_1g041245 30.641 421 234 16 24 430 10 386 2.81e-40 148
MS.gene64989.t1 MTR_8g467800 38.514 296 153 10 5 274 1 293 1.41e-37 140
MS.gene64989.t1 MTR_5g084070 27.711 415 279 8 23 422 11 419 1.25e-36 139
MS.gene64989.t1 MTR_5g021550 48.521 169 61 8 5 155 2 162 9.00e-35 127
MS.gene64989.t1 MTR_5g008950 28.878 419 237 15 27 434 1 369 1.67e-33 129
MS.gene64989.t1 MTR_4g024745 35.593 295 151 14 147 413 1 284 7.29e-33 125
MS.gene64989.t1 MTR_5g080710 29.206 428 277 11 23 429 31 453 4.23e-32 127
MS.gene64989.t1 MTR_7g056433 28.333 420 245 14 25 430 12 389 4.61e-31 123
MS.gene64989.t1 MTR_7g115270 28.199 422 250 13 25 427 12 399 7.11e-31 122
MS.gene64989.t1 MTR_3g108150 29.187 418 239 14 25 429 13 386 1.51e-30 121
MS.gene64989.t1 MTR_5g073420 29.310 406 210 15 16 402 2 349 2.55e-29 118
MS.gene64989.t1 MTR_7g098510 27.891 441 249 14 6 430 4 391 4.09e-28 115
MS.gene64989.t1 MTR_1089s0010 28.738 428 235 19 21 430 4 379 4.76e-28 114
MS.gene64989.t1 MTR_3g023630 29.577 426 226 19 22 430 5 373 1.34e-27 113
MS.gene64989.t1 MTR_2g007450 28.540 452 256 18 9 428 2 418 1.53e-27 114
MS.gene64989.t1 MTR_7g098570 27.928 444 249 14 2 429 4 392 1.86e-27 114
MS.gene64989.t1 MTR_7g032370 28.883 412 214 17 37 430 2 352 3.74e-27 111
MS.gene64989.t1 MTR_3g107100 28.182 440 230 18 25 430 11 398 4.62e-27 112
MS.gene64989.t1 MTR_5g008920 27.674 430 243 17 17 430 4 381 3.31e-26 109
MS.gene64989.t1 MTR_7g098480 29.345 443 236 16 6 429 4 388 3.88e-26 110
MS.gene64989.t1 MTR_8g014290 42.405 158 62 7 23 156 8 160 1.05e-25 102
MS.gene64989.t1 MTR_7g033915 28.095 420 225 16 23 429 9 364 1.14e-25 107
MS.gene64989.t1 MTR_7g026500 26.889 450 243 19 15 433 4 398 1.71e-25 107
MS.gene64989.t1 MTR_3g105060 28.261 414 237 18 24 430 13 373 4.12e-25 106
MS.gene64989.t1 MTR_1g108820 29.604 429 235 18 20 428 3 384 5.63e-25 106
MS.gene64989.t1 MTR_3g087260 28.085 470 248 17 25 429 12 456 6.28e-25 107
MS.gene64989.t1 MTR_6g040270 26.353 425 243 15 23 428 6 379 8.75e-25 105
MS.gene64989.t1 MTR_7g056420 28.333 420 212 17 25 424 9 359 1.97e-24 107
MS.gene64989.t1 MTR_3g099800 58.621 87 35 1 342 427 19 105 2.67e-24 97.1
MS.gene64989.t1 MTR_7g056430 28.333 420 212 17 25 424 9 359 2.89e-24 106
MS.gene64989.t1 MTR_3g108560 27.644 416 243 16 25 429 20 388 3.13e-24 103
MS.gene64989.t1 MTR_1g066830 28.132 423 252 17 20 429 3 386 7.47e-24 102
MS.gene64989.t1 MTR_5g045170 27.273 429 256 16 15 429 4 390 8.97e-24 102
MS.gene64989.t1 MTR_7g033990 27.033 418 242 14 22 424 8 377 1.30e-23 102
MS.gene64989.t1 MTR_1g085120 28.276 435 254 19 12 430 79 471 1.98e-23 102
MS.gene64989.t1 MTR_3g036250 26.603 421 229 16 25 427 5 363 2.32e-23 101
MS.gene64989.t1 MTR_1g085120 28.276 435 254 19 12 430 154 546 3.76e-23 102
MS.gene64989.t1 MTR_3g107120 28.833 437 228 19 25 431 9 392 3.81e-23 100
MS.gene64989.t1 MTR_7g034115 28.125 416 232 17 24 422 10 375 9.66e-23 99.8
MS.gene64989.t1 MTR_5g058000 28.605 423 238 15 20 429 3 374 1.84e-22 98.6
MS.gene64989.t1 MTR_5g045510 28.680 394 208 16 19 398 6 340 9.27e-22 96.7
MS.gene64989.t1 MTR_6g022500 26.950 423 247 19 24 430 100 476 1.20e-21 97.4
MS.gene64989.t1 MTR_7g056447 37.778 180 105 6 25 200 9 185 2.09e-21 94.4
MS.gene64989.t1 MTR_0009s0080 27.873 409 240 14 1 397 2 367 2.46e-21 95.9
MS.gene64989.t1 MTR_3g107160 26.606 436 244 17 17 430 2 383 3.97e-21 95.1
MS.gene64989.t1 MTR_7g056277 26.887 424 236 16 25 429 259 627 5.67e-21 95.9
MS.gene64989.t1 MTR_3g082890 26.977 430 248 17 25 430 97 484 6.89e-21 95.1
MS.gene64989.t1 MTR_7g056287 27.358 424 234 17 25 429 3 371 1.49e-20 93.2
MS.gene64989.t1 MTR_0543s0010 25.768 423 237 19 25 429 86 449 1.79e-20 93.6
MS.gene64989.t1 MTR_5g007410 27.231 437 258 17 6 427 14 405 1.92e-20 93.6
MS.gene64989.t1 MTR_4g098590 27.778 396 219 17 27 397 1 354 2.73e-20 92.4
MS.gene64989.t1 MTR_7g032380 37.500 192 99 10 24 203 10 192 2.91e-20 92.0
MS.gene64989.t1 MTR_7g032380 33.143 175 101 6 268 430 186 356 4.21e-15 76.6
MS.gene64989.t1 MTR_3g040700 24.675 385 215 15 22 389 40 366 6.76e-20 92.0
MS.gene64989.t1 MTR_6g011460 27.804 428 245 16 20 430 41 421 1.23e-19 90.9
MS.gene64989.t1 MTR_2g008320 27.376 442 244 19 12 430 40 427 4.61e-19 89.4
MS.gene64989.t1 MTR_4g056040 27.517 447 242 14 23 398 7 442 9.30e-19 89.0
MS.gene64989.t1 MTR_4g056030 27.130 446 266 15 18 422 2 429 2.43e-18 87.4
MS.gene64989.t1 MTR_4g024720 38.415 164 64 9 25 155 17 176 5.32e-18 82.8
MS.gene64989.t1 MTR_3g071850 26.619 417 256 16 21 422 20 401 1.07e-17 86.3
MS.gene64989.t1 MTR_7g007080 30.254 433 221 23 25 431 4 381 1.10e-17 84.7
MS.gene64989.t1 MTR_4g134150 36.957 184 101 8 25 203 14 187 1.23e-17 82.0
MS.gene64989.t1 MTR_7g034110 27.586 290 182 9 24 304 10 280 1.79e-17 83.6
MS.gene64989.t1 MTR_2g007500 29.016 386 191 20 18 377 7 335 1.87e-17 83.6
MS.gene64989.t1 MTR_8g085430 34.021 194 110 8 24 203 10 199 2.44e-17 83.2
MS.gene64989.t1 MTR_5g083890 26.841 421 214 19 25 400 6 377 2.99e-17 84.3
MS.gene64989.t1 MTR_6g045333 25.688 436 270 16 11 429 47 445 4.41e-17 83.6
MS.gene64989.t1 MTR_8g014230 44.944 89 46 3 335 423 13 98 5.31e-17 76.6
MS.gene64989.t1 MTR_3g099830 26.824 425 228 19 24 428 11 372 9.54e-17 82.0
MS.gene64989.t1 MTR_4g056020 32.212 208 128 6 25 222 9 213 1.24e-16 82.0
MS.gene64989.t1 MTR_7g088260 35.233 193 113 8 19 205 85 271 1.49e-16 82.0
MS.gene64989.t1 MTR_3g108560 33.152 184 112 7 25 205 20 195 2.30e-16 80.1
MS.gene64989.t1 MTR_0492s0020 24.552 391 218 19 25 397 86 417 1.21e-15 79.0
MS.gene64989.t1 MTR_3g109982 32.240 183 119 3 25 205 13 192 1.50e-15 79.3
MS.gene64989.t1 MTR_5g013500 25.701 428 225 16 25 430 9 365 1.61e-15 78.2
MS.gene64989.t1 MTR_3g110010 32.240 183 119 3 25 205 13 192 2.05e-15 79.0
MS.gene64989.t1 MTR_5g073370 28.321 399 212 20 25 403 5 349 2.35e-15 77.8
MS.gene64989.t1 MTR_2g005990 26.923 442 233 21 24 428 5 393 2.48e-15 77.8
MS.gene64989.t1 MTR_5g061680 35.204 196 114 9 16 202 2 193 3.20e-15 76.6
MS.gene64989.t1 MTR_7g114710 34.574 188 112 6 24 204 12 195 3.65e-15 77.0
MS.gene64989.t1 MTR_1g038710 31.579 209 126 7 8 202 2 207 3.95e-15 77.4
MS.gene64989.t1 MTR_2g047848 26.521 411 246 18 23 397 5 395 1.63e-14 75.5
MS.gene64989.t1 MTR_5g065100 27.078 421 223 17 19 429 2 348 1.71e-14 75.5
MS.gene64989.t1 MTR_1g108820 35.450 189 107 7 24 205 7 187 2.19e-14 74.7
MS.gene64989.t1 MTR_4g056070 30.800 250 116 8 25 222 9 253 3.11e-14 74.7
MS.gene64989.t1 MTR_3g115430 36.937 111 64 3 321 430 20 125 3.77e-14 69.3
MS.gene64989.t1 MTR_7g084080 35.882 170 96 6 10 174 2 163 4.38e-14 72.8
MS.gene64989.t1 MTR_1g013560 25.607 453 267 21 9 417 3 429 9.79e-14 73.2
MS.gene64989.t1 MTR_3g467400 30.000 200 116 9 25 203 3 199 1.47e-13 72.0
MS.gene64989.t1 MTR_3g467400 42.105 76 44 0 356 431 293 368 1.85e-11 65.9
MS.gene64989.t1 MTR_7g033945 37.143 175 93 8 23 186 9 177 1.74e-13 68.9
MS.gene64989.t1 MTR_1g014450 25.472 424 270 18 8 403 1 406 2.00e-13 72.0
MS.gene64989.t1 MTR_6g044560 29.237 236 126 9 8 207 161 391 2.08e-13 72.4
MS.gene64989.t1 MTR_6g044572 30.909 220 111 9 24 207 1 215 2.64e-13 71.6
MS.gene64989.t1 MTR_3g048290 25.714 420 257 15 24 397 22 432 4.25e-13 71.2
MS.gene64989.t1 MTR_6g018660 36.066 183 87 9 21 181 16 190 5.16e-13 70.5
MS.gene64989.t1 MTR_7g033940 40.351 114 62 5 27 137 96 206 7.57e-13 68.2
MS.gene64989.t1 MTR_5g060570 32.450 151 94 5 10 157 2 147 1.46e-12 67.8
MS.gene64989.t1 MTR_5g058100 31.414 191 120 7 19 202 3 189 2.04e-12 68.9
MS.gene64989.t1 MTR_3g082890 32.447 188 115 7 25 205 17 199 2.39e-12 68.9
MS.gene64989.t1 MTR_2g091145 26.588 425 255 16 9 397 5 408 2.47e-12 68.9
MS.gene64989.t1 MTR_1g108800 25.490 408 227 16 24 428 7 340 5.87e-12 67.0
MS.gene64989.t1 MTR_1g095750 44.048 84 44 3 24 106 45 126 7.38e-12 63.2
MS.gene64989.t1 MTR_7g021630 27.987 318 185 12 25 310 17 322 1.25e-11 66.2
MS.gene64989.t1 MTR_7g021630 27.987 318 185 12 25 310 17 322 1.33e-11 66.2
MS.gene64989.t1 MTR_1g085120 30.500 200 125 8 12 202 166 360 2.07e-11 65.9
MS.gene64989.t1 MTR_1g021825 24.272 412 271 15 10 397 73 467 2.10e-11 66.2
MS.gene64989.t1 MTR_1g013560 29.680 219 132 8 9 211 3 215 2.13e-11 65.5
MS.gene64989.t1 MTR_2g100590 28.643 199 124 7 24 206 41 237 2.18e-11 65.9
MS.gene64989.t1 MTR_7g056280 35.000 120 64 2 293 398 428 547 2.18e-11 66.2
MS.gene64989.t1 MTR_1g021825 24.272 412 271 15 10 397 2 396 2.26e-11 65.9
MS.gene64989.t1 MTR_2g100590 28.643 199 124 7 24 206 41 237 2.30e-11 65.9
MS.gene64989.t1 MTR_2g100590 28.643 199 124 7 24 206 41 237 2.33e-11 66.2
MS.gene64989.t1 MTR_6g025160 30.570 193 114 8 25 206 101 284 2.79e-11 65.1
MS.gene64989.t1 MTR_1g016310 32.127 221 126 11 7 211 4 216 3.65e-11 64.7
MS.gene64989.t1 MTR_5g040850 25.476 420 234 19 22 397 4 388 4.91e-11 64.7
MS.gene64989.t1 MTR_1g016310 32.127 221 126 11 7 211 4 216 5.19e-11 64.7
MS.gene64989.t1 MTR_3g095640 32.667 150 85 7 21 157 14 160 5.43e-11 61.6
MS.gene64989.t1 MTR_2g020170 34.211 114 69 2 25 134 22 133 6.03e-11 60.5
MS.gene64989.t1 MTR_4g024770 60.870 46 17 1 25 70 24 68 6.25e-11 58.5
MS.gene64989.t1 MTR_5g012840 36.154 130 75 6 305 430 193 318 9.37e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene64989.t1 AT4G10400 30.095 422 265 15 24 429 1 408 2.64e-30 121
MS.gene64989.t1 AT4G10400 30.095 422 265 15 24 429 1 408 2.64e-30 121
MS.gene64989.t1 AT4G10400 30.095 422 265 15 24 429 1 408 2.64e-30 121
MS.gene64989.t1 AT1G78750 26.998 463 263 22 20 427 13 455 4.47e-26 110
MS.gene64989.t1 AT1G78750 26.998 463 263 22 20 427 13 455 4.47e-26 110
MS.gene64989.t1 AT1G78760 26.126 444 274 18 22 427 13 440 8.47e-25 106
MS.gene64989.t1 AT5G56420 27.896 423 282 14 25 430 6 422 1.92e-24 105
MS.gene64989.t1 AT5G56420 27.896 423 282 14 25 430 6 422 1.92e-24 105
MS.gene64989.t1 AT5G56420 27.896 423 282 14 25 430 6 422 1.92e-24 105
MS.gene64989.t1 AT1G32375 28.539 438 266 15 24 430 1 422 2.72e-23 101
MS.gene64989.t1 AT1G32375 28.539 438 266 15 24 430 1 422 2.72e-23 101
MS.gene64989.t1 AT5G56370 26.879 439 269 17 24 429 1 420 1.47e-22 99.8
MS.gene64989.t1 AT5G56370 26.879 439 269 17 24 429 1 420 1.47e-22 99.8
MS.gene64989.t1 AT5G53840 25.771 454 282 18 10 427 3 437 6.40e-22 97.8
MS.gene64989.t1 AT5G38590 26.526 426 254 13 24 415 1 401 8.89e-22 97.1
MS.gene64989.t1 AT1G69630 27.015 459 261 20 20 427 13 448 1.38e-21 97.1
MS.gene64989.t1 AT4G26340 27.397 438 268 17 24 430 1 419 2.83e-21 95.9
MS.gene64989.t1 AT2G26030 27.556 450 269 20 25 427 4 443 4.11e-21 95.5
MS.gene64989.t1 AT1G66310 27.679 448 256 20 23 427 17 439 1.10e-20 94.4
MS.gene64989.t1 AT5G22730 25.532 470 279 19 12 427 11 463 1.40e-20 94.4
MS.gene64989.t1 AT5G22730 25.532 470 279 19 12 427 11 463 1.40e-20 94.4
MS.gene64989.t1 AT2G26030 27.556 450 264 20 25 427 4 438 1.53e-20 94.0
MS.gene64989.t1 AT2G26030 27.556 450 264 20 25 427 4 438 1.53e-20 94.0
MS.gene64989.t1 AT1G16930 27.447 470 262 21 15 430 5 449 1.56e-20 94.0
MS.gene64989.t1 AT1G16930 27.447 470 262 21 15 430 5 449 1.56e-20 94.0
MS.gene64989.t1 AT1G16930 27.447 470 262 21 15 430 5 449 1.56e-20 94.0
MS.gene64989.t1 AT1G66290 25.268 467 275 24 9 427 10 450 1.89e-20 93.6
MS.gene64989.t1 AT3G52680 29.025 441 270 19 25 434 21 449 3.25e-20 93.2
MS.gene64989.t1 AT5G38570 26.540 422 253 14 24 432 1 378 3.56e-20 92.0
MS.gene64989.t1 AT3G42770 28.111 434 257 15 27 422 1 417 4.24e-20 93.2
MS.gene64989.t1 AT1G51370 23.904 456 285 19 5 425 2 430 1.23e-19 91.3
MS.gene64989.t1 AT3G59200 34.031 191 109 6 25 202 7 193 1.74e-19 90.1
MS.gene64989.t1 AT4G09920 36.559 186 111 5 24 204 1 184 3.21e-19 87.8
MS.gene64989.t1 AT4G09920 36.559 186 111 5 24 204 1 184 3.21e-19 87.8
MS.gene64989.t1 AT4G09920 36.559 186 111 5 24 204 1 184 3.21e-19 87.8
MS.gene64989.t1 AT4G09920 36.559 186 111 5 24 204 1 184 4.09e-19 88.2
MS.gene64989.t1 AT4G09920 36.559 186 111 5 24 204 1 184 4.09e-19 88.2
MS.gene64989.t1 AT4G13965 26.802 444 261 19 20 427 5 420 5.18e-19 89.4
MS.gene64989.t1 AT3G59200 34.031 191 109 6 25 202 7 193 5.53e-19 89.7
MS.gene64989.t1 AT5G53635 27.928 444 259 19 27 429 2 425 5.79e-19 89.0
MS.gene64989.t1 AT2G29930 27.193 456 272 18 25 429 12 458 5.90e-19 89.4
MS.gene64989.t1 AT2G29930 27.193 456 272 18 25 429 12 458 5.90e-19 89.4
MS.gene64989.t1 AT3G60040 31.674 221 118 6 25 218 13 227 9.21e-19 89.4
MS.gene64989.t1 AT3G60040 31.674 221 118 6 25 218 230 444 1.20e-18 89.0
MS.gene64989.t1 AT3G60040 31.674 221 118 6 25 218 232 446 1.36e-18 89.0
MS.gene64989.t1 AT3G60040 31.674 221 118 6 25 218 233 447 1.36e-18 89.0
MS.gene64989.t1 AT3G60040 31.674 221 118 6 25 218 232 446 1.37e-18 89.0
MS.gene64989.t1 AT5G56560 27.500 440 263 20 23 430 3 418 1.45e-18 87.8
MS.gene64989.t1 AT4G26350 24.512 461 261 15 24 430 1 428 1.92e-18 87.4
MS.gene64989.t1 AT5G56400 25.446 448 306 15 4 430 15 455 2.65e-18 87.4
MS.gene64989.t1 AT5G22610 23.394 436 281 13 25 427 18 433 7.16e-18 85.9
MS.gene64989.t1 AT5G60610 25.187 401 252 15 24 394 1 383 7.97e-18 85.1
MS.gene64989.t1 AT5G60610 25.187 401 252 15 24 394 1 383 7.97e-18 85.1
MS.gene64989.t1 AT5G38590 31.795 195 114 5 24 208 1 186 1.31e-17 83.2
MS.gene64989.t1 AT5G44950 26.683 416 255 18 25 400 4 409 1.74e-17 84.7
MS.gene64989.t1 AT5G50270 26.950 423 260 16 24 412 1 408 1.97e-17 84.3
MS.gene64989.t1 AT3G44060 26.757 441 266 16 30 431 4 426 3.09e-17 84.0
MS.gene64989.t1 AT5G22720 23.347 484 296 15 5 431 1 466 8.11e-17 82.8
MS.gene64989.t1 AT3G58920 26.611 481 266 19 24 429 1 469 1.57e-16 82.0
MS.gene64989.t1 AT5G22670 25.829 422 252 17 16 393 2 406 1.74e-16 81.6
MS.gene64989.t1 AT3G59190 32.642 193 112 7 25 202 12 201 3.58e-16 80.5
MS.gene64989.t1 AT3G50710 27.494 451 259 23 24 430 1 427 3.65e-16 80.5
MS.gene64989.t1 AT3G59190 32.642 193 112 7 25 202 12 201 4.73e-16 80.5
MS.gene64989.t1 AT1G66300 25.541 462 283 21 9 427 10 453 6.05e-16 80.1
MS.gene64989.t1 AT5G56440 36.216 185 109 7 24 202 1 182 8.32e-16 79.3
MS.gene64989.t1 AT1G66300 25.624 441 263 20 9 427 10 407 1.86e-15 78.2
MS.gene64989.t1 AT1G51370 23.678 397 244 17 5 367 2 373 5.02e-15 77.0
MS.gene64989.t1 AT5G22660 25.778 450 270 17 25 428 13 444 5.60e-15 77.0
MS.gene64989.t1 AT3G26930 26.432 454 280 16 12 431 11 444 1.26e-14 75.9
MS.gene64989.t1 AT3G59240 30.570 193 119 7 25 205 8 197 1.30e-14 76.3
MS.gene64989.t1 AT2G42720 31.250 192 117 7 24 202 1 190 2.07e-14 75.5
MS.gene64989.t1 AT5G41840 29.358 218 121 10 9 202 2 210 2.24e-14 75.5
MS.gene64989.t1 AT5G53640 30.097 206 123 7 8 204 5 198 4.60e-14 71.6
MS.gene64989.t1 AT5G22700 24.873 394 256 14 25 404 43 410 7.62e-14 73.6
MS.gene64989.t1 AT3G59210 32.461 191 116 5 25 204 7 195 9.38e-14 73.6
MS.gene64989.t1 AT3G59210 32.461 191 116 5 25 204 7 195 9.38e-14 73.6
MS.gene64989.t1 AT3G59210 32.461 191 116 5 25 204 7 195 9.38e-14 73.6
MS.gene64989.t1 AT3G59210 32.461 191 116 5 25 204 7 195 9.38e-14 73.6
MS.gene64989.t1 AT3G59210 32.461 191 116 5 25 204 7 195 9.38e-14 73.6
MS.gene64989.t1 AT4G14103 33.663 202 108 9 25 211 8 198 1.02e-13 73.2
MS.gene64989.t1 AT5G02920 30.049 203 128 6 25 225 28 218 1.48e-13 70.9
MS.gene64989.t1 AT4G14103 33.663 202 108 9 25 211 8 198 1.53e-13 72.4
MS.gene64989.t1 AT4G14103 33.663 202 108 9 25 211 8 198 1.53e-13 72.4
MS.gene64989.t1 AT3G52680 32.620 187 115 5 25 204 21 203 2.65e-13 71.2
MS.gene64989.t1 AT3G26922 28.571 217 145 6 19 228 8 221 2.68e-13 70.9
MS.gene64989.t1 AT3G26922 28.571 217 145 6 19 228 8 221 2.68e-13 70.9
MS.gene64989.t1 AT5G50270 30.964 197 119 6 24 209 1 191 4.22e-13 70.1
MS.gene64989.t1 AT1G48400 31.217 189 116 5 25 202 10 195 4.31e-13 71.6
MS.gene64989.t1 AT1G48400 31.217 189 116 5 25 202 10 195 4.34e-13 71.2
MS.gene64989.t1 AT5G22700 32.620 187 111 7 25 204 6 184 7.89e-13 70.5
MS.gene64989.t1 AT5G22700 32.620 187 111 7 25 204 6 184 7.89e-13 70.5
MS.gene64989.t1 AT5G22700 32.620 187 111 7 25 204 6 184 7.89e-13 70.5
MS.gene64989.t1 AT5G22700 32.620 187 111 7 25 204 6 184 7.89e-13 70.5
MS.gene64989.t1 AT5G38390 34.562 217 118 12 24 229 1 204 9.46e-13 70.1
MS.gene64989.t1 AT5G22700 32.620 187 111 7 25 204 43 221 9.48e-13 70.1
MS.gene64989.t1 AT4G00315 33.161 193 114 9 24 205 1 189 1.17e-12 69.7
MS.gene64989.t1 AT5G02930 27.523 218 123 8 4 205 4 202 1.50e-12 69.7
MS.gene64989.t1 AT4G13960 34.826 201 106 9 24 208 1 192 1.89e-12 69.3
MS.gene64989.t1 AT4G13960 34.826 201 106 9 24 208 1 192 1.89e-12 69.3
MS.gene64989.t1 AT5G03100 29.630 216 135 9 20 230 4 207 2.14e-12 68.2
MS.gene64989.t1 AT5G03100 29.630 216 135 9 20 230 4 207 2.14e-12 68.2
MS.gene64989.t1 AT1G13570 30.846 201 125 8 21 213 2 196 2.45e-12 67.8
MS.gene64989.t1 AT1G55030 25.432 405 262 19 8 388 2 390 3.71e-12 68.2
MS.gene64989.t1 AT1G55030 26.020 392 250 19 21 388 5 380 4.96e-12 67.8
MS.gene64989.t1 AT1G13570 29.596 223 133 9 21 235 2 208 4.99e-12 67.8
MS.gene64989.t1 AT1G13570 29.596 223 133 9 21 235 2 208 4.99e-12 67.8
MS.gene64989.t1 AT1G55660 32.812 192 110 10 24 202 52 237 5.98e-12 67.4
MS.gene64989.t1 AT1G22000 24.295 461 283 18 10 427 12 449 6.52e-12 67.8
MS.gene64989.t1 AT1G55660 32.812 192 110 10 24 202 52 237 8.04e-12 67.4
MS.gene64989.t1 AT3G58940 31.579 228 118 12 24 223 1 218 8.84e-12 67.4
MS.gene64989.t1 AT3G58940 31.579 228 118 12 24 223 1 218 8.84e-12 67.4
MS.gene64989.t1 AT3G59000 34.884 129 72 4 24 142 1 127 1.18e-11 66.2
MS.gene64989.t1 AT5G38590 30.282 142 83 3 24 157 1 134 1.23e-11 65.5
MS.gene64989.t1 AT4G22280 31.674 221 133 10 24 233 1 214 1.52e-11 65.9
MS.gene64989.t1 AT5G56560 30.108 186 124 6 23 205 3 185 1.63e-11 66.6
MS.gene64989.t1 AT3G58930 30.660 212 102 10 24 204 1 198 1.78e-11 66.2
MS.gene64989.t1 AT3G58930 30.660 212 102 10 24 204 1 198 1.78e-11 66.2
MS.gene64989.t1 AT3G58930 30.660 212 102 10 24 204 1 198 1.78e-11 66.2
MS.gene64989.t1 AT4G22280 31.674 221 133 10 24 233 1 214 1.97e-11 65.9
MS.gene64989.t1 AT1G21990 31.250 192 121 7 25 209 9 196 3.37e-11 65.5
MS.gene64989.t1 AT4G00320 28.000 200 118 8 25 202 13 208 6.40e-11 64.7
MS.gene64989.t1 AT3G59160 28.037 214 113 8 25 202 13 221 6.67e-11 64.3
MS.gene64989.t1 AT5G22660 31.220 205 131 7 25 224 13 212 7.66e-11 63.5
MS.gene64989.t1 AT1G66640 24.190 401 250 21 58 427 36 413 7.82e-11 63.9
MS.gene64989.t1 AT1G19070 40.476 84 47 2 24 105 1 83 9.38e-11 58.5
MS.gene64989.t1 AT1G51370 23.077 364 237 15 5 344 2 346 9.53e-11 63.5
MS.gene64989.t1 AT5G41830 28.000 200 118 8 25 202 13 208 9.81e-11 63.9

Find 103 sgRNAs with CRISPR-Local

Find 135 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATGAGCCGTTTGTCTTCT+AGG 0.168133 8.4:-39600968 MS.gene64989:CDS
ATTGGTGGATTTCAACTTCT+TGG 0.236380 8.4:+39600293 None:intergenic
TGATCTAAATTGCGAAATTC+TGG 0.257783 8.4:+39599962 None:intergenic
TTCGTATTCACGAAATTTAC+AGG 0.269966 8.4:+39600806 None:intergenic
GACTGCTCAATCTGTCCATC+TGG 0.287385 8.4:+39601051 None:intergenic
TTTGCGTAACGGACTTGTTT+TGG 0.287410 8.4:-39599587 MS.gene64989:CDS
GGCTACAGATTGGGCATTGC+AGG 0.292128 8.4:-39600237 MS.gene64989:CDS
TGGACTTACCTTGATCTTGC+TGG 0.294187 8.4:-39600258 MS.gene64989:CDS
CAGAATATTTGAGTTAAAAC+AGG 0.317327 8.4:+39599922 None:intergenic
ACCTTCAAATCTTCGAGCTT+GGG 0.324170 8.4:+39600360 None:intergenic
AATTCTGGATAATTTATATC+AGG 0.327966 8.4:+39599977 None:intergenic
CTGAAGTATATTTGCATAGA+AGG 0.331495 8.4:-39599652 MS.gene64989:CDS
TTTGAAGGTCATTGAGAATA+GGG 0.335744 8.4:+39600148 None:intergenic
CACGAAATTTACAGGTGAAA+TGG 0.341384 8.4:+39600814 None:intergenic
AACAAATTCACTTTGACAAT+AGG 0.350640 8.4:+39600173 None:intergenic
CCACCTGTGGAAGGATCTTC+AGG 0.363048 8.4:-39600940 MS.gene64989:CDS
GATCTTGCTGGCTACAGATT+GGG 0.369760 8.4:-39600246 MS.gene64989:CDS
ATACATGCAGTGGCCACTTC+AGG 0.378400 8.4:-39600002 MS.gene64989:intron
GACGCAGATGGGTCTCCTTA+AGG 0.385602 8.4:-39599454 None:intergenic
TTAATAGTTGCCTTTCTCTC+TGG 0.385645 8.4:-39600387 MS.gene64989:CDS
CTTCTATGCAAATATACTTC+AGG 0.390562 8.4:+39599653 None:intergenic
CCCCAAGCTCGAAGATTTGA+AGG 0.393634 8.4:-39600361 MS.gene64989:CDS
TGCAGGCAACTTTCACACTA+TGG 0.398879 8.4:-39600220 MS.gene64989:CDS
GGATTTCAACTTCTTGGAGC+TGG 0.409700 8.4:+39600299 None:intergenic
AACCTTCAAATCTTCGAGCT+TGG 0.410282 8.4:+39600359 None:intergenic
TGATCTTGCTGGCTACAGAT+TGG 0.421322 8.4:-39600247 MS.gene64989:CDS
CTTGGGGCAGCCAGAGAGAA+AGG 0.442176 8.4:+39600377 None:intergenic
GTCCGTGCTGCCATTGGCCC+CGG 0.445560 8.4:-39600762 MS.gene64989:CDS
CCAAGTGAAATTATCATTGG+TGG 0.450552 8.4:+39600278 None:intergenic
CAACTTAACTTTGACGCAGA+TGG 0.456146 8.4:-39599466 MS.gene64989:CDS
AACTTAACTTTGACGCAGAT+GGG 0.474068 8.4:-39599465 MS.gene64989:CDS
TTCTTCAAGGCCGGGGCCAA+TGG 0.477825 8.4:+39600752 None:intergenic
GTCGTAACGGACGTTATTGT+AGG 0.481663 8.4:+39600990 None:intergenic
GAGATCAAGTTCTTCAAGGC+CGG 0.487882 8.4:+39600743 None:intergenic
AGGTGGGATATGAGACATCT+AGG 0.488525 8.4:+39599673 None:intergenic
AGTCCAAGTGAAATTATCAT+TGG 0.489259 8.4:+39600275 None:intergenic
ATTTGCATAGAAGGATATCA+AGG 0.494802 8.4:-39599643 MS.gene64989:CDS
AGATCAAGTTCTTCAAGGCC+GGG 0.495433 8.4:+39600744 None:intergenic
TGTCGAGATCAAGTTCTTCA+AGG 0.495760 8.4:+39600739 None:intergenic
GAATGTGGCGCGATCTGCGG+AGG 0.501492 8.4:+39600844 None:intergenic
AAACACACCTTCTTCAGTGA+TGG 0.502863 8.4:+39600432 None:intergenic
TTGTGTGGATGAAATCAGTT+TGG 0.511432 8.4:-39600334 MS.gene64989:CDS
GCCTTCCACTTCGACAACCT+TGG 0.511811 8.4:-39600918 MS.gene64989:CDS
CTTCTAGGTGGCGCCACCTG+TGG 0.513852 8.4:-39600953 MS.gene64989:CDS
ATCTGTAGCCAGCAAGATCA+AGG 0.513929 8.4:+39600250 None:intergenic
GCGTCTCAGATAGCTTCAAA+AGG 0.515776 8.4:-39600896 MS.gene64989:CDS
CCACCAATGATAATTTCACT+TGG 0.521685 8.4:-39600278 MS.gene64989:CDS
CCTTCAAATCTTCGAGCTTG+GGG 0.522369 8.4:+39600361 None:intergenic
AAGTCGAATGTATTGAAATG+TGG 0.522652 8.4:-39600785 MS.gene64989:CDS
GCAATTTCCATCACTGAAGA+AGG 0.523230 8.4:-39600439 MS.gene64989:CDS
GGCGCCACCTAGAAGACAAA+CGG 0.523348 8.4:+39600961 None:intergenic
CATCTGCGTCAAAGTTAAGT+TGG 0.527648 8.4:+39599467 None:intergenic
GCAACAACCTCGTTTCCCTC+AGG 0.532637 8.4:-39600671 MS.gene64989:intron
ATGTGGGTCCGTGCTGCCAT+TGG 0.533953 8.4:-39600768 MS.gene64989:CDS
GCTTGCACGGCGACGACAAG+TGG 0.537318 8.4:-39601080 MS.gene64989:CDS
CTAGGAACAGTTGTTGATTG+TGG 0.543151 8.4:+39599691 None:intergenic
GTTGTTGCAGCTCATGAAGA+AGG 0.544005 8.4:+39600686 None:intergenic
CTATGCAAATATACTTCAGG+TGG 0.545118 8.4:+39599656 None:intergenic
TAGGTGGCGCCACCTGTGGA+AGG 0.550311 8.4:-39600949 MS.gene64989:CDS
AACCATCATCTTTACTAACA+TGG 0.553721 8.4:-39599717 MS.gene64989:CDS
ACTGCTCAATCTGTCCATCT+GGG 0.561303 8.4:+39601052 None:intergenic
GGACAGATTGAGCAGTCTAC+CGG 0.562892 8.4:-39601045 MS.gene64989:CDS
ACCATCATCTTTACTAACAT+GGG 0.565567 8.4:-39599716 MS.gene64989:CDS
CCTAGAAGACAAACGGCTCA+TGG 0.565898 8.4:+39600968 None:intergenic
GATCAAGTTCTTCAAGGCCG+GGG 0.568669 8.4:+39600745 None:intergenic
TGGAAACTTTGCAGTCTATG+TGG 0.570510 8.4:-39600495 MS.gene64989:intron
TCCCATGTTAGTAAAGATGA+TGG 0.571546 8.4:+39599715 None:intergenic
TGAAGCTATCTGAGACGCCA+AGG 0.574070 8.4:+39600901 None:intergenic
GGCCGGGGCCAATGGCAGCA+CGG 0.575707 8.4:+39600760 None:intergenic
TTTATATCAGGAACCTGAAG+TGG 0.582063 8.4:+39599989 None:intergenic
AAGATTAACAAATATACCGA+GGG 0.582923 8.4:-39599503 MS.gene64989:CDS
GGACGTTATTGTAGGGAGGA+AGG 0.584967 8.4:+39600998 None:intergenic
ATATGACACAGAACTGAGTC+CGG 0.586329 8.4:+39601026 None:intergenic
AGACGCCAAGGTTGTCGAAG+TGG 0.587717 8.4:+39600913 None:intergenic
GACAAGTGGAGGCACCCAGA+TGG 0.590276 8.4:-39601066 MS.gene64989:CDS
AGGCCTGAAGATCCTTCCAC+AGG 0.594911 8.4:+39600937 None:intergenic
AGTCGAATGTATTGAAATGT+GGG 0.597640 8.4:-39600784 MS.gene64989:CDS
TCGTAACGGACGTTATTGTA+GGG 0.598277 8.4:+39600991 None:intergenic
TTTGAATGTGGCGCGATCTG+CGG 0.599793 8.4:+39600841 None:intergenic
GTCACGTCATTCAACATCAA+AGG 0.600319 8.4:-39600100 MS.gene64989:intron
AGATTTGAAGGTTAATTGTG+TGG 0.601491 8.4:-39600349 MS.gene64989:CDS
GCCAAGGTTGTCGAAGTGGA+AGG 0.603187 8.4:+39600917 None:intergenic
TGCACGGCGACGACAAGTGG+AGG 0.607534 8.4:-39601077 MS.gene64989:CDS
TCTATGTGGTGAATTCAAAA+CGG 0.607695 8.4:-39600481 MS.gene64989:CDS
TCATGAAGAAGGAAGGAGGT+AGG 0.611485 8.4:+39600697 None:intergenic
CCTGAAGATCCTTCCACAGG+TGG 0.612455 8.4:+39600940 None:intergenic
TTGCAGCTCATGAAGAAGGA+AGG 0.613912 8.4:+39600690 None:intergenic
AAGAAAACGAAAAGCTTGCA+CGG 0.629248 8.4:-39601093 MS.gene64989:CDS
AATGTGGCGCGATCTGCGGA+GGG 0.630677 8.4:+39600845 None:intergenic
TAAATTACCTGAGGGAAACG+AGG 0.631468 8.4:+39600664 None:intergenic
AAAGATTAACAAATATACCG+AGG 0.643261 8.4:-39599504 MS.gene64989:CDS
TCTCATAATTCATAGCGACA+AGG 0.650761 8.4:-39599864 MS.gene64989:intron
CAGCTCATGAAGAAGGAAGG+AGG 0.657786 8.4:+39600693 None:intergenic
CAAACGGCTCATGGTCGTAA+CGG 0.659939 8.4:+39600977 None:intergenic
AGAATATTTGAGTTAAAACA+GGG 0.665389 8.4:+39599923 None:intergenic
TATGCAAATATACTTCAGGT+GGG 0.673254 8.4:+39599657 None:intergenic
TGGCAAGTGACAGATCCCCT+CGG 0.678473 8.4:+39599487 None:intergenic
AGGCAACTTTCACACTATGG+CGG 0.690913 8.4:-39600217 MS.gene64989:CDS
TGAGCCGTTTGTCTTCTAGG+TGG 0.697856 8.4:-39600965 MS.gene64989:CDS
ATGTGGTGAATTCAAAACGG+AGG 0.698665 8.4:-39600478 MS.gene64989:CDS
TAACGGACGTTATTGTAGGG+AGG 0.702610 8.4:+39600994 None:intergenic
AGATTAACAAATATACCGAG+GGG 0.744560 8.4:-39599502 MS.gene64989:CDS
GGTGTGTTTAAACTGCACAG+TGG 0.756659 8.4:-39600418 MS.gene64989:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTTTATATATAAATATAGTT+TGG - chr8.4:39600513-39600532 MS.gene64989:intron 10.0%
!!! AAATTAGTTTAAAGAAGAAT+TGG + chr8.4:39599992-39600011 None:intergenic 15.0%
!!! AATTAGTTTAAAGAAGAATT+GGG + chr8.4:39599991-39600010 None:intergenic 15.0%
!! AATTCTGGATAATTTATATC+AGG + chr8.4:39600598-39600617 None:intergenic 20.0%
!! GTTTAAATTAAATTACCTGA+GGG + chr8.4:39599919-39599938 None:intergenic 20.0%
!!! AATTTTTAATCCTACGAAAT+TGG - chr8.4:39600007-39600026 MS.gene64989:intron 20.0%
!!! AGAATATTTGAGTTAAAACA+GGG + chr8.4:39600652-39600671 None:intergenic 20.0%
!!! ATTAGTTTAAAGAAGAATTG+GGG + chr8.4:39599990-39600009 None:intergenic 20.0%
!!! ATTCATTATCATCATTTTGA+AGG + chr8.4:39600442-39600461 None:intergenic 20.0%
!!! TTGTTAATCTTTTGATAGAA+CGG + chr8.4:39601060-39601079 None:intergenic 20.0%
! AAAGATTAACAAATATACCG+AGG - chr8.4:39601068-39601087 MS.gene64989:CDS 25.0%
! AACAAATTCACTTTGACAAT+AGG + chr8.4:39600402-39600421 None:intergenic 25.0%
! AAGATTAACAAATATACCGA+GGG - chr8.4:39601069-39601088 MS.gene64989:CDS 25.0%
! AGTTTATTTGAATCCATCTT+TGG - chr8.4:39600748-39600767 MS.gene64989:CDS 25.0%
! ATGACTCGAAAATATATTTG+TGG + chr8.4:39600810-39600829 None:intergenic 25.0%
! GGTTTAAATTAAATTACCTG+AGG + chr8.4:39599920-39599939 None:intergenic 25.0%
!! CAGAATATTTGAGTTAAAAC+AGG + chr8.4:39600653-39600672 None:intergenic 25.0%
!!! CTGTTTTAACTCAAATATTC+TGG - chr8.4:39600651-39600670 MS.gene64989:intron 25.0%
!!! TATTTTTGTTGACATTTCAC+TGG - chr8.4:39601018-39601037 MS.gene64989:CDS 25.0%
AACCATCATCTTTACTAACA+TGG - chr8.4:39600855-39600874 MS.gene64989:CDS 30.0%
AAGTCGAATGTATTGAAATG+TGG - chr8.4:39599787-39599806 MS.gene64989:intron 30.0%
ACCATCATCTTTACTAACAT+GGG - chr8.4:39600856-39600875 MS.gene64989:CDS 30.0%
AGATTAACAAATATACCGAG+GGG - chr8.4:39601070-39601089 MS.gene64989:CDS 30.0%
AGATTTGAAGGTTAATTGTG+TGG - chr8.4:39600223-39600242 MS.gene64989:CDS 30.0%
AGTCCAAGTGAAATTATCAT+TGG + chr8.4:39600300-39600319 None:intergenic 30.0%
AGTCGAATGTATTGAAATGT+GGG - chr8.4:39599788-39599807 MS.gene64989:intron 30.0%
ATTGACATTGTGATATTAGC+TGG + chr8.4:39599941-39599960 None:intergenic 30.0%
ATTTGCATAGAAGGATATCA+AGG - chr8.4:39600929-39600948 MS.gene64989:CDS 30.0%
CTGAAGTATATTTGCATAGA+AGG - chr8.4:39600920-39600939 MS.gene64989:CDS 30.0%
CTTCTATGCAAATATACTTC+AGG + chr8.4:39600922-39600941 None:intergenic 30.0%
TATGCAAATATACTTCAGGT+GGG + chr8.4:39600918-39600937 None:intergenic 30.0%
TCTATGTGGTGAATTCAAAA+CGG - chr8.4:39600091-39600110 MS.gene64989:intron 30.0%
TGATCTAAATTGCGAAATTC+TGG + chr8.4:39600613-39600632 None:intergenic 30.0%
TTCGTATTCACGAAATTTAC+AGG + chr8.4:39599769-39599788 None:intergenic 30.0%
TTTGAAGGTCATTGAGAATA+GGG + chr8.4:39600427-39600446 None:intergenic 30.0%
! AGCTTTTCGTTTTCTTTTAG+AGG + chr8.4:39599475-39599494 None:intergenic 30.0%
! ATGTTGTATAACCTGTCTTT+TGG - chr8.4:39600057-39600076 MS.gene64989:intron 30.0%
! GCTGAATATATTTTGCGTAA+CGG - chr8.4:39600974-39600993 MS.gene64989:CDS 30.0%
! TGAAATGGAACTTTTGAATG+TGG + chr8.4:39599746-39599765 None:intergenic 30.0%
!! TTTCTTTTAGAGGCTAACTT+GGG + chr8.4:39599465-39599484 None:intergenic 30.0%
!! TTTTCTTTTAGAGGCTAACT+TGG + chr8.4:39599466-39599485 None:intergenic 30.0%
!! TTTTGAAGGTCATTGAGAAT+AGG + chr8.4:39600428-39600447 None:intergenic 30.0%
AACTTAACTTTGACGCAGAT+GGG - chr8.4:39601107-39601126 MS.gene64989:CDS 35.0%
AAGAAAACGAAAAGCTTGCA+CGG - chr8.4:39599479-39599498 MS.gene64989:CDS 35.0%
ATACATAGACAGACCAAAGA+TGG + chr8.4:39600764-39600783 None:intergenic 35.0%
CACGAAATTTACAGGTGAAA+TGG + chr8.4:39599761-39599780 None:intergenic 35.0%
CATGAGTTTACCAATTTCGT+AGG + chr8.4:39600020-39600039 None:intergenic 35.0%
CCAAGTGAAATTATCATTGG+TGG + chr8.4:39600297-39600316 None:intergenic 35.0%
CCACCAATGATAATTTCACT+TGG - chr8.4:39600294-39600313 MS.gene64989:CDS 35.0%
CTACGAAATTGGTAAACTCA+TGG - chr8.4:39600018-39600037 MS.gene64989:intron 35.0%
CTATGCAAATATACTTCAGG+TGG + chr8.4:39600919-39600938 None:intergenic 35.0%
TATACAATGATGGCAAGTGA+TGG + chr8.4:39600553-39600572 None:intergenic 35.0%
TCCCATGTTAGTAAAGATGA+TGG + chr8.4:39600860-39600879 None:intergenic 35.0%
TCTCATAATTCATAGCGACA+AGG - chr8.4:39600708-39600727 MS.gene64989:CDS 35.0%
TTAATAGTTGCCTTTCTCTC+TGG - chr8.4:39600185-39600204 MS.gene64989:CDS 35.0%
TTGTGTGGATGAAATCAGTT+TGG - chr8.4:39600238-39600257 MS.gene64989:CDS 35.0%
TTTATATCAGGAACCTGAAG+TGG + chr8.4:39600586-39600605 None:intergenic 35.0%
!! ATTGGTGGATTTCAACTTCT+TGG + chr8.4:39600282-39600301 None:intergenic 35.0%
AAACACACCTTCTTCAGTGA+TGG + chr8.4:39600143-39600162 None:intergenic 40.0%
AACCTTCAAATCTTCGAGCT+TGG + chr8.4:39600216-39600235 None:intergenic 40.0%
ACCTTCAAATCTTCGAGCTT+GGG + chr8.4:39600215-39600234 None:intergenic 40.0%
ATATGACACAGAACTGAGTC+CGG + chr8.4:39599549-39599568 None:intergenic 40.0%
ATGTGGTGAATTCAAAACGG+AGG - chr8.4:39600094-39600113 MS.gene64989:intron 40.0%
CAACTTAACTTTGACGCAGA+TGG - chr8.4:39601106-39601125 MS.gene64989:CDS 40.0%
CATCTGCGTCAAAGTTAAGT+TGG + chr8.4:39601108-39601127 None:intergenic 40.0%
CCACTGCATGTATACAATGA+TGG + chr8.4:39600563-39600582 None:intergenic 40.0%
CCATCATTGTATACATGCAG+TGG - chr8.4:39600560-39600579 MS.gene64989:intron 40.0%
CGAAATTGGTAAACTCATGG+TGG - chr8.4:39600021-39600040 MS.gene64989:intron 40.0%
CTGCAAAGTTTCCAAAAGAC+AGG + chr8.4:39600071-39600090 None:intergenic 40.0%
GCAATTTCCATCACTGAAGA+AGG - chr8.4:39600133-39600152 MS.gene64989:CDS 40.0%
GTCACGTCATTCAACATCAA+AGG - chr8.4:39600472-39600491 MS.gene64989:CDS 40.0%
GTCATCTTGTTCCATGTTAC+TGG - chr8.4:39600825-39600844 MS.gene64989:CDS 40.0%
TAAATTACCTGAGGGAAACG+AGG + chr8.4:39599911-39599930 None:intergenic 40.0%
TCTTGTTCCATGTTACTGGT+AGG - chr8.4:39600829-39600848 MS.gene64989:CDS 40.0%
TGGAAACTTTGCAGTCTATG+TGG - chr8.4:39600077-39600096 MS.gene64989:intron 40.0%
TGTCGAGATCAAGTTCTTCA+AGG + chr8.4:39599836-39599855 None:intergenic 40.0%
! CTAGGAACAGTTGTTGATTG+TGG + chr8.4:39600884-39600903 None:intergenic 40.0%
!! TCGTAACGGACGTTATTGTA+GGG + chr8.4:39599584-39599603 None:intergenic 40.0%
!!! TTTGCGTAACGGACTTGTTT+TGG - chr8.4:39600985-39601004 MS.gene64989:CDS 40.0%
ACTGCTCAATCTGTCCATCT+GGG + chr8.4:39599523-39599542 None:intergenic 45.0%
AGATCAAGTTCTTCAAGGCC+GGG + chr8.4:39599831-39599850 None:intergenic 45.0%
AGGCAACTTTCACACTATGG+CGG - chr8.4:39600355-39600374 MS.gene64989:CDS 45.0%
AGGTGGGATATGAGACATCT+AGG + chr8.4:39600902-39600921 None:intergenic 45.0%
ATCTGTAGCCAGCAAGATCA+AGG + chr8.4:39600325-39600344 None:intergenic 45.0%
CCTTCAAATCTTCGAGCTTG+GGG + chr8.4:39600214-39600233 None:intergenic 45.0%
GAGATCAAGTTCTTCAAGGC+CGG + chr8.4:39599832-39599851 None:intergenic 45.0%
GCGTCTCAGATAGCTTCAAA+AGG - chr8.4:39599676-39599695 MS.gene64989:CDS 45.0%
GGATTTCAACTTCTTGGAGC+TGG + chr8.4:39600276-39600295 None:intergenic 45.0%
GGTGTGTTTAAACTGCACAG+TGG - chr8.4:39600154-39600173 MS.gene64989:CDS 45.0%
GTTGTTGCAGCTCATGAAGA+AGG + chr8.4:39599889-39599908 None:intergenic 45.0%
TCATGAAGAAGGAAGGAGGT+AGG + chr8.4:39599878-39599897 None:intergenic 45.0%
TGCAGGCAACTTTCACACTA+TGG - chr8.4:39600352-39600371 MS.gene64989:CDS 45.0%
TGGACTTACCTTGATCTTGC+TGG - chr8.4:39600314-39600333 MS.gene64989:CDS 45.0%
TGTTCCATGTTACTGGTAGG+AGG - chr8.4:39600832-39600851 MS.gene64989:CDS 45.0%
TTGCAGCTCATGAAGAAGGA+AGG + chr8.4:39599885-39599904 None:intergenic 45.0%
! GATCTTGCTGGCTACAGATT+GGG - chr8.4:39600326-39600345 MS.gene64989:CDS 45.0%
! TAACGGACGTTATTGTAGGG+AGG + chr8.4:39599581-39599600 None:intergenic 45.0%
! TGATCTTGCTGGCTACAGAT+TGG - chr8.4:39600325-39600344 MS.gene64989:CDS 45.0%
!! GTCGTAACGGACGTTATTGT+AGG + chr8.4:39599585-39599604 None:intergenic 45.0%
ATACATGCAGTGGCCACTTC+AGG - chr8.4:39600570-39600589 MS.gene64989:intron 50.0%
CAAACGGCTCATGGTCGTAA+CGG + chr8.4:39599598-39599617 None:intergenic 50.0%
CAGCTCATGAAGAAGGAAGG+AGG + chr8.4:39599882-39599901 None:intergenic 50.0%
CCATGAGCCGTTTGTCTTCT+AGG - chr8.4:39599604-39599623 MS.gene64989:CDS 50.0%
CCCCAAGCTCGAAGATTTGA+AGG - chr8.4:39600211-39600230 MS.gene64989:CDS 50.0%
CCTAGAAGACAAACGGCTCA+TGG + chr8.4:39599607-39599626 None:intergenic 50.0%
GACTGCTCAATCTGTCCATC+TGG + chr8.4:39599524-39599543 None:intergenic 50.0%
GATCAAGTTCTTCAAGGCCG+GGG + chr8.4:39599830-39599849 None:intergenic 50.0%
GGACAGATTGAGCAGTCTAC+CGG - chr8.4:39599527-39599546 MS.gene64989:CDS 50.0%
GGACGTTATTGTAGGGAGGA+AGG + chr8.4:39599577-39599596 None:intergenic 50.0%
GGTTCCTCCTACCAGTAACA+TGG + chr8.4:39600839-39600858 None:intergenic 50.0%
TGAGCCGTTTGTCTTCTAGG+TGG - chr8.4:39599607-39599626 MS.gene64989:CDS 50.0%
TTTGAATGTGGCGCGATCTG+CGG + chr8.4:39599734-39599753 None:intergenic 50.0%
! TGAAGCTATCTGAGACGCCA+AGG + chr8.4:39599674-39599693 None:intergenic 50.0%
AGACGCCAAGGTTGTCGAAG+TGG + chr8.4:39599662-39599681 None:intergenic 55.0%
AGGCCTGAAGATCCTTCCAC+AGG + chr8.4:39599638-39599657 None:intergenic 55.0%
CCACCTGTGGAAGGATCTTC+AGG - chr8.4:39599632-39599651 MS.gene64989:CDS 55.0%
CCTGAAGATCCTTCCACAGG+TGG + chr8.4:39599635-39599654 None:intergenic 55.0%
GCAACAACCTCGTTTCCCTC+AGG - chr8.4:39599901-39599920 MS.gene64989:CDS 55.0%
GCCAAGGTTGTCGAAGTGGA+AGG + chr8.4:39599658-39599677 None:intergenic 55.0%
GCCTTCCACTTCGACAACCT+TGG - chr8.4:39599654-39599673 MS.gene64989:CDS 55.0%
GGCGCCACCTAGAAGACAAA+CGG + chr8.4:39599614-39599633 None:intergenic 55.0%
TGGCAAGTGACAGATCCCCT+CGG + chr8.4:39601088-39601107 None:intergenic 55.0%
! GGCTACAGATTGGGCATTGC+AGG - chr8.4:39600335-39600354 MS.gene64989:CDS 55.0%
AATGTGGCGCGATCTGCGGA+GGG + chr8.4:39599730-39599749 None:intergenic 60.0%
ATGTGGGTCCGTGCTGCCAT+TGG - chr8.4:39599804-39599823 MS.gene64989:intron 60.0%
CTTGGGGCAGCCAGAGAGAA+AGG + chr8.4:39600198-39600217 None:intergenic 60.0%
TTCTTCAAGGCCGGGGCCAA+TGG + chr8.4:39599823-39599842 None:intergenic 60.0%
!! GACAAGTGGAGGCACCCAGA+TGG - chr8.4:39599506-39599525 MS.gene64989:CDS 60.0%
CTTCTAGGTGGCGCCACCTG+TGG - chr8.4:39599619-39599638 MS.gene64989:CDS 65.0%
GAATGTGGCGCGATCTGCGG+AGG + chr8.4:39599731-39599750 None:intergenic 65.0%
GCTTGCACGGCGACGACAAG+TGG - chr8.4:39599492-39599511 MS.gene64989:CDS 65.0%
TAGGTGGCGCCACCTGTGGA+AGG - chr8.4:39599623-39599642 MS.gene64989:CDS 65.0%
TGCACGGCGACGACAAGTGG+AGG - chr8.4:39599495-39599514 MS.gene64989:CDS 65.0%
GTCCGTGCTGCCATTGGCCC+CGG - chr8.4:39599810-39599829 MS.gene64989:intron 70.0%
GGCCGGGGCCAATGGCAGCA+CGG + chr8.4:39599815-39599834 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 39599456 39601138 39599456 ID=MS.gene64989
chr8.4 mRNA 39599456 39601138 39599456 ID=MS.gene64989.t1;Parent=MS.gene64989
chr8.4 exon 39600672 39601138 39600672 ID=MS.gene64989.t1.exon1;Parent=MS.gene64989.t1
chr8.4 CDS 39600672 39601138 39600672 ID=cds.MS.gene64989.t1;Parent=MS.gene64989.t1
chr8.4 exon 39600101 39600503 39600101 ID=MS.gene64989.t1.exon2;Parent=MS.gene64989.t1
chr8.4 CDS 39600101 39600503 39600101 ID=cds.MS.gene64989.t1;Parent=MS.gene64989.t1
chr8.4 exon 39599865 39600014 39599865 ID=MS.gene64989.t1.exon3;Parent=MS.gene64989.t1
chr8.4 CDS 39599865 39600014 39599865 ID=cds.MS.gene64989.t1;Parent=MS.gene64989.t1
chr8.4 exon 39599456 39599743 39599456 ID=MS.gene64989.t1.exon4;Parent=MS.gene64989.t1
chr8.4 CDS 39599456 39599743 39599456 ID=cds.MS.gene64989.t1;Parent=MS.gene64989.t1
Gene Sequence

>MS.gene64989

ATGGCGCCCAAGTTAGCCTCTAAAAGAAAACGAAAAGCTTGCACGGCGACGACAAGTGGAGGCACCCAGATGGACAGATTGAGCAGTCTACCGGACTCAGTTCTGTGTCATATCATGTCCTTCCTCCCTACAATAACGTCCGTTACGACCATGAGCCGTTTGTCTTCTAGGTGGCGCCACCTGTGGAAGGATCTTCAGGCCTTCCACTTCGACAACCTTGGCGTCTCAGATAGCTTCAAAAGGTTTGCATTTTTTGTGAACGCTGTGCTTGCCCTCCGCAGATCGCGCCACATTCAAAAGTTCCATTTCACCTGTAAATTTCGTGAATACGAAGTCGAATGTATTGAAATGTGGGTCCGTGCTGCCATTGGCCCCGGCCTTGAAGAACTTGATCTCGACATCTATGAAGCTGACATAAACCTACCTCCTTCCTTCTTCATGAGCTGCAACAACCTCGTTTCCCTCAGGTAATTTAATTTAAACCAGCTAATATCACAATGTCAATACAAATTAATTAGTATTTATTACTAACCCCAATTCTTCTTTAAACTAATTTTTAATCCTACGAAATTGGTAAACTCATGGTGGAAACAAAACTAGAATGTTGTATAACCTGTCTTTTGGAAACTTTGCAGTCTATGTGGTGAATTCAAAACGGAGGTTAAATATTCTTTAGTGCAATTTCCATCACTGAAGAAGGTGTGTTTAAACTGCACAGTGGATTCAGATTTAATAGTTGCCTTTCTCTCTGGCTGCCCCAAGCTCGAAGATTTGAAGGTTAATTGTGTGGATGAAATCAGTTTGGCTAAAGCTTTCTCCAGCTCCAAGAAGTTGAAATCCACCAATGATAATTTCACTTGGACTTACCTTGATCTTGCTGGCTACAGATTGGGCATTGCAGGCAACTTTCACACTATGGCGGAAGCATTTCTTGATGTCTTTTCCTATTGTCAAAGTGAATTTGTTGACCCTATTCTCAATGACCTTCAAAATGATGATAATGAATTATATCTAGTGTCACGTCATTCAACATCAAAGGTGAAGATTTATTTTTATGCTTTATATATAAATATAGTTTGGTACTAATTTTATTTCCATCACTTGCCATCATTGTATACATGCAGTGGCCACTTCAGGTTCCTGATATAAATTATCCAGAATTTCGCAATTTAGATCATCTAAAGTTCACTCTTCCCTGTTTTAACTCAAATATTCTGGTCAACGTGCTTGAGAAATGTCATGAGCTAGAAGTTCTCATAATTCATAGCGACAAGGTTTGTTCACGCTTCTCAAGTTTATTTGAATCCATCTTTGGTCTGTCTATGTATGCATGTATGTATCAATCTGTAAACCACAAATATATTTTCGAGTCATCTTGTTCCATGTTACTGGTAGGAGGAACCATCATCTTTACTAACATGGGAGCCACAATCAACAACTGTTCCTAGATGTCTCATATCCCACCTGAAGTATATTTGCATAGAAGGATATCAAGGATTTGAAGACGAGCTCACATTTGCTGAATATATTTTGCGTAACGGACTTGTTTTGGAGACAATGCTTATTTTTGTTGACATTTCACTGGACATAACAAACAAGTACCGTTCTATCAAAAGATTAACAAATATACCGAGGGGATCTGTCACTTGCCAACTTAACTTTGACGCAGATGGGTCTCCTTAA

Protein sequence

>MS.gene64989.t1

MAPKLASKRKRKACTATTSGGTQMDRLSSLPDSVLCHIMSFLPTITSVTTMSRLSSRWRHLWKDLQAFHFDNLGVSDSFKRFAFFVNAVLALRRSRHIQKFHFTCKFREYEVECIEMWVRAAIGPGLEELDLDIYEADINLPPSFFMSCNNLVSLSLCGEFKTEVKYSLVQFPSLKKVCLNCTVDSDLIVAFLSGCPKLEDLKVNCVDEISLAKAFSSSKKLKSTNDNFTWTYLDLAGYRLGIAGNFHTMAEAFLDVFSYCQSEFVDPILNDLQNDDNELYLVSRHSTSKWPLQVPDINYPEFRNLDHLKFTLPCFNSNILVNVLEKCHELEVLIIHSDKEEPSSLLTWEPQSTTVPRCLISHLKYICIEGYQGFEDELTFAEYILRNGLVLETMLIFVDISLDITNKYRSIKRLTNIPRGSVTCQLNFDADGSP