Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene007876.t1 | XP_013445395.1 | 96.9 | 454 | 14 | 0 | 4 | 457 | 3 | 456 | 5.90E-262 | 912.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene007876.t1 | Q9FM89 | 29.4 | 466 | 258 | 17 | 14 | 457 | 6 | 422 | 1.3e-28 | 129.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene007876.t1 | A0A072TQF7 | 96.9 | 454 | 14 | 0 | 4 | 457 | 3 | 456 | 4.2e-262 | 912.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene007876.t1 | MTR_8g058965 | 96.916 | 454 | 14 | 0 | 4 | 457 | 3 | 456 | 0.0 | 904 |
MS.gene007876.t1 | MTR_8g469020 | 66.816 | 446 | 145 | 2 | 14 | 457 | 7 | 451 | 0.0 | 589 |
MS.gene007876.t1 | MTR_4g050250 | 66.423 | 411 | 128 | 4 | 3 | 403 | 10 | 420 | 0.0 | 534 |
MS.gene007876.t1 | MTR_8g070950 | 57.388 | 467 | 156 | 12 | 1 | 457 | 1 | 434 | 4.00e-164 | 470 |
MS.gene007876.t1 | MTR_8g062010 | 56.044 | 455 | 156 | 10 | 14 | 457 | 9 | 430 | 4.50e-161 | 462 |
MS.gene007876.t1 | MTR_8g062310 | 53.587 | 446 | 165 | 9 | 13 | 457 | 24 | 428 | 1.80e-148 | 430 |
MS.gene007876.t1 | MTR_8g062080 | 52.967 | 455 | 171 | 11 | 14 | 457 | 23 | 445 | 5.94e-145 | 422 |
MS.gene007876.t1 | MTR_8g062300 | 48.697 | 499 | 179 | 13 | 2 | 457 | 13 | 477 | 2.32e-134 | 396 |
MS.gene007876.t1 | MTR_8g467790 | 47.677 | 409 | 132 | 12 | 13 | 401 | 147 | 493 | 3.48e-105 | 322 |
MS.gene007876.t1 | MTR_2g083840 | 44.181 | 464 | 231 | 10 | 3 | 457 | 13 | 457 | 1.07e-101 | 311 |
MS.gene007876.t1 | MTR_8g468810 | 42.737 | 475 | 231 | 15 | 2 | 457 | 11 | 463 | 1.21e-101 | 311 |
MS.gene007876.t1 | MTR_8g062270 | 43.601 | 461 | 225 | 11 | 11 | 456 | 13 | 453 | 5.45e-100 | 307 |
MS.gene007876.t1 | MTR_4g032730 | 39.050 | 484 | 243 | 11 | 5 | 456 | 3 | 466 | 4.76e-95 | 295 |
MS.gene007876.t1 | MTR_8g058970 | 41.031 | 485 | 235 | 15 | 6 | 457 | 11 | 477 | 1.17e-94 | 294 |
MS.gene007876.t1 | MTR_8g467800 | 42.373 | 472 | 232 | 12 | 1 | 457 | 7 | 453 | 9.39e-92 | 286 |
MS.gene007876.t1 | MTR_5g092960 | 38.347 | 472 | 260 | 9 | 1 | 456 | 5 | 461 | 1.55e-85 | 270 |
MS.gene007876.t1 | MTR_8g468840 | 39.957 | 463 | 255 | 8 | 1 | 455 | 1 | 448 | 4.52e-83 | 263 |
MS.gene007876.t1 | MTR_8g468760 | 39.451 | 474 | 208 | 18 | 5 | 456 | 2 | 418 | 1.62e-79 | 253 |
MS.gene007876.t1 | MTR_8g014260 | 40.220 | 455 | 242 | 15 | 14 | 457 | 16 | 451 | 6.88e-79 | 252 |
MS.gene007876.t1 | MTR_8g445780 | 43.301 | 418 | 201 | 15 | 1 | 410 | 1 | 390 | 2.68e-77 | 246 |
MS.gene007876.t1 | MTR_8g468810 | 42.820 | 383 | 180 | 14 | 2 | 367 | 11 | 371 | 1.92e-75 | 241 |
MS.gene007876.t1 | MTR_8g468810 | 42.478 | 339 | 164 | 11 | 2 | 330 | 11 | 328 | 4.50e-67 | 218 |
MS.gene007876.t1 | MTR_8g468810 | 43.865 | 326 | 152 | 11 | 2 | 317 | 11 | 315 | 1.02e-66 | 216 |
MS.gene007876.t1 | MTR_8g468810 | 43.865 | 326 | 152 | 11 | 2 | 317 | 11 | 315 | 1.85e-66 | 217 |
MS.gene007876.t1 | MTR_8g014160 | 36.555 | 476 | 198 | 17 | 1 | 457 | 35 | 425 | 3.83e-65 | 216 |
MS.gene007876.t1 | MTR_5g092960 | 37.467 | 379 | 213 | 7 | 1 | 367 | 5 | 371 | 1.18e-58 | 198 |
MS.gene007876.t1 | MTR_2g086020 | 69.784 | 139 | 42 | 0 | 319 | 457 | 177 | 315 | 2.89e-58 | 194 |
MS.gene007876.t1 | MTR_2g086020 | 45.033 | 151 | 67 | 4 | 41 | 185 | 2 | 142 | 3.42e-27 | 111 |
MS.gene007876.t1 | MTR_8g467800 | 43.302 | 321 | 157 | 10 | 2 | 317 | 9 | 309 | 1.75e-54 | 185 |
MS.gene007876.t1 | MTR_4g024710 | 37.097 | 310 | 157 | 10 | 161 | 457 | 63 | 347 | 2.82e-44 | 158 |
MS.gene007876.t1 | MTR_8g014210 | 40.678 | 236 | 133 | 7 | 224 | 457 | 1 | 231 | 1.16e-38 | 140 |
MS.gene007876.t1 | MTR_8g077460 | 40.816 | 245 | 127 | 6 | 7 | 246 | 3 | 234 | 2.44e-36 | 137 |
MS.gene007876.t1 | MTR_8g077460 | 41.530 | 183 | 102 | 4 | 275 | 457 | 198 | 375 | 5.31e-30 | 120 |
MS.gene007876.t1 | MTR_1g041245 | 29.654 | 462 | 223 | 17 | 13 | 457 | 10 | 386 | 3.15e-34 | 132 |
MS.gene007876.t1 | MTR_5g021550 | 48.101 | 158 | 66 | 6 | 5 | 155 | 14 | 162 | 1.39e-32 | 121 |
MS.gene007876.t1 | MTR_4g024745 | 36.678 | 289 | 157 | 12 | 154 | 435 | 10 | 279 | 1.92e-32 | 125 |
MS.gene007876.t1 | MTR_7g056433 | 28.791 | 455 | 242 | 16 | 11 | 457 | 9 | 389 | 1.42e-30 | 122 |
MS.gene007876.t1 | MTR_5g084070 | 29.241 | 448 | 266 | 16 | 13 | 449 | 12 | 419 | 3.86e-30 | 122 |
MS.gene007876.t1 | MTR_8g014290 | 44.737 | 152 | 74 | 4 | 14 | 156 | 10 | 160 | 4.77e-29 | 112 |
MS.gene007876.t1 | MTR_5g080710 | 28.352 | 455 | 268 | 17 | 13 | 449 | 32 | 446 | 4.35e-28 | 116 |
MS.gene007876.t1 | MTR_3g099800 | 62.069 | 87 | 32 | 1 | 369 | 454 | 19 | 105 | 4.89e-28 | 107 |
MS.gene007876.t1 | MTR_7g026500 | 27.447 | 470 | 251 | 17 | 1 | 456 | 1 | 394 | 1.74e-27 | 114 |
MS.gene007876.t1 | MTR_7g033915 | 28.821 | 458 | 209 | 20 | 13 | 456 | 10 | 364 | 1.38e-26 | 110 |
MS.gene007876.t1 | MTR_3g071850 | 27.171 | 449 | 255 | 16 | 8 | 449 | 18 | 401 | 2.70e-23 | 103 |
MS.gene007876.t1 | MTR_5g008920 | 25.439 | 456 | 248 | 17 | 11 | 457 | 9 | 381 | 4.50e-23 | 100 |
MS.gene007876.t1 | MTR_4g098590 | 29.787 | 423 | 214 | 19 | 16 | 424 | 1 | 354 | 1.14e-22 | 99.8 |
MS.gene007876.t1 | MTR_1g066830 | 25.499 | 451 | 258 | 18 | 13 | 456 | 7 | 386 | 1.48e-22 | 99.4 |
MS.gene007876.t1 | MTR_1g085120 | 26.915 | 457 | 254 | 16 | 8 | 457 | 88 | 471 | 1.61e-22 | 100 |
MS.gene007876.t1 | MTR_0543s0010 | 30.464 | 453 | 216 | 27 | 14 | 456 | 86 | 449 | 2.66e-22 | 99.4 |
MS.gene007876.t1 | MTR_1g085120 | 26.696 | 457 | 255 | 16 | 8 | 457 | 163 | 546 | 3.06e-22 | 99.8 |
MS.gene007876.t1 | MTR_7g075820 | 25.641 | 468 | 239 | 20 | 14 | 454 | 6 | 391 | 2.08e-21 | 96.3 |
MS.gene007876.t1 | MTR_7g056447 | 33.168 | 202 | 110 | 6 | 14 | 214 | 9 | 186 | 2.17e-21 | 94.4 |
MS.gene007876.t1 | MTR_5g073420 | 36.199 | 221 | 113 | 13 | 1 | 217 | 1 | 197 | 2.95e-21 | 95.5 |
MS.gene007876.t1 | MTR_4g024720 | 41.143 | 175 | 75 | 8 | 2 | 155 | 9 | 176 | 3.54e-21 | 91.7 |
MS.gene007876.t1 | MTR_1g108820 | 27.232 | 448 | 257 | 16 | 9 | 454 | 3 | 383 | 1.00e-20 | 94.0 |
MS.gene007876.t1 | MTR_2g007500 | 32.883 | 222 | 109 | 9 | 1 | 217 | 1 | 187 | 1.23e-20 | 93.2 |
MS.gene007876.t1 | MTR_1089s0010 | 24.558 | 452 | 255 | 18 | 13 | 457 | 7 | 379 | 4.12e-20 | 92.0 |
MS.gene007876.t1 | MTR_7g115270 | 34.842 | 221 | 117 | 9 | 6 | 219 | 4 | 204 | 8.57e-20 | 91.3 |
MS.gene007876.t1 | MTR_3g087260 | 28.279 | 488 | 262 | 18 | 14 | 456 | 12 | 456 | 1.32e-19 | 91.3 |
MS.gene007876.t1 | MTR_7g032380 | 34.722 | 216 | 114 | 10 | 5 | 217 | 2 | 193 | 1.40e-19 | 90.1 |
MS.gene007876.t1 | MTR_7g032380 | 31.481 | 162 | 96 | 4 | 310 | 457 | 196 | 356 | 2.73e-11 | 65.1 |
MS.gene007876.t1 | MTR_2g036470 | 26.452 | 465 | 258 | 19 | 5 | 456 | 2 | 395 | 2.96e-19 | 89.7 |
MS.gene007876.t1 | MTR_2g008320 | 25.536 | 466 | 251 | 17 | 6 | 457 | 44 | 427 | 3.89e-19 | 89.7 |
MS.gene007876.t1 | MTR_3g108560 | 25.166 | 453 | 245 | 14 | 14 | 456 | 20 | 388 | 4.69e-19 | 89.0 |
MS.gene007876.t1 | MTR_5g007410 | 26.058 | 449 | 251 | 15 | 16 | 454 | 28 | 405 | 6.91e-19 | 89.4 |
MS.gene007876.t1 | MTR_0492s0020 | 30.254 | 433 | 199 | 28 | 14 | 432 | 86 | 429 | 7.88e-19 | 89.0 |
MS.gene007876.t1 | MTR_3g108150 | 32.243 | 214 | 113 | 9 | 14 | 222 | 13 | 199 | 3.51e-18 | 86.7 |
MS.gene007876.t1 | MTR_5g058100 | 30.734 | 218 | 126 | 7 | 7 | 222 | 2 | 196 | 4.03e-18 | 86.3 |
MS.gene007876.t1 | MTR_5g061680 | 32.895 | 228 | 119 | 10 | 1 | 222 | 1 | 200 | 4.53e-18 | 85.5 |
MS.gene007876.t1 | MTR_8g085430 | 33.649 | 211 | 114 | 8 | 13 | 217 | 10 | 200 | 1.61e-17 | 84.0 |
MS.gene007876.t1 | MTR_5g045510 | 25.481 | 416 | 221 | 16 | 12 | 424 | 10 | 339 | 1.76e-17 | 84.3 |
MS.gene007876.t1 | MTR_1g038710 | 27.315 | 432 | 272 | 15 | 14 | 425 | 19 | 428 | 2.51e-17 | 84.3 |
MS.gene007876.t1 | MTR_4g080787 | 27.004 | 474 | 292 | 19 | 11 | 456 | 16 | 463 | 3.17e-17 | 84.3 |
MS.gene007876.t1 | MTR_4g056030 | 28.281 | 442 | 257 | 19 | 14 | 429 | 9 | 416 | 4.42e-17 | 83.6 |
MS.gene007876.t1 | MTR_4g056040 | 27.140 | 479 | 258 | 20 | 1 | 425 | 1 | 442 | 6.24e-17 | 83.6 |
MS.gene007876.t1 | MTR_7g007080 | 26.856 | 458 | 233 | 18 | 14 | 454 | 4 | 376 | 9.58e-17 | 82.0 |
MS.gene007876.t1 | MTR_3g107100 | 32.569 | 218 | 113 | 9 | 7 | 218 | 6 | 195 | 1.12e-16 | 82.0 |
MS.gene007876.t1 | MTR_2g007450 | 32.877 | 219 | 114 | 9 | 13 | 215 | 15 | 216 | 1.20e-16 | 82.0 |
MS.gene007876.t1 | MTR_3g107120 | 34.404 | 218 | 107 | 10 | 14 | 217 | 9 | 204 | 1.38e-16 | 81.6 |
MS.gene007876.t1 | MTR_3g036250 | 33.810 | 210 | 108 | 10 | 14 | 217 | 5 | 189 | 1.90e-16 | 80.9 |
MS.gene007876.t1 | MTR_7g055943 | 25.055 | 455 | 259 | 17 | 13 | 457 | 39 | 421 | 2.08e-16 | 81.6 |
MS.gene007876.t1 | MTR_4g055990 | 25.474 | 475 | 262 | 16 | 14 | 425 | 9 | 454 | 3.25e-16 | 81.3 |
MS.gene007876.t1 | MTR_6g011460 | 26.316 | 456 | 248 | 16 | 12 | 457 | 44 | 421 | 3.39e-16 | 80.9 |
MS.gene007876.t1 | MTR_3g107160 | 30.876 | 217 | 117 | 9 | 11 | 219 | 7 | 198 | 4.00e-16 | 80.1 |
MS.gene007876.t1 | MTR_4g055990 | 25.474 | 475 | 262 | 16 | 14 | 425 | 9 | 454 | 4.35e-16 | 80.9 |
MS.gene007876.t1 | MTR_7g034110 | 35.577 | 208 | 109 | 9 | 13 | 217 | 10 | 195 | 4.39e-16 | 79.7 |
MS.gene007876.t1 | MTR_7g098480 | 33.962 | 212 | 104 | 8 | 13 | 217 | 17 | 199 | 6.71e-16 | 80.1 |
MS.gene007876.t1 | MTR_1g053025 | 25.000 | 460 | 253 | 19 | 13 | 454 | 1 | 386 | 7.24e-16 | 79.3 |
MS.gene007876.t1 | MTR_7g033945 | 36.723 | 177 | 90 | 8 | 13 | 181 | 10 | 172 | 7.62e-16 | 75.9 |
MS.gene007876.t1 | MTR_7g033940 | 37.500 | 136 | 69 | 5 | 11 | 142 | 91 | 214 | 9.22e-16 | 76.6 |
MS.gene007876.t1 | MTR_5g008950 | 28.947 | 266 | 144 | 11 | 16 | 268 | 1 | 234 | 1.04e-15 | 79.0 |
MS.gene007876.t1 | MTR_3g023630 | 32.394 | 213 | 116 | 11 | 5 | 215 | 2 | 188 | 1.20e-15 | 78.6 |
MS.gene007876.t1 | MTR_7g098510 | 30.952 | 210 | 113 | 9 | 13 | 217 | 17 | 199 | 1.61e-15 | 78.6 |
MS.gene007876.t1 | MTR_7g098510 | 35.461 | 141 | 85 | 3 | 322 | 457 | 252 | 391 | 4.20e-11 | 65.1 |
MS.gene007876.t1 | MTR_3g040700 | 31.604 | 212 | 110 | 9 | 14 | 217 | 43 | 227 | 5.02e-15 | 77.4 |
MS.gene007876.t1 | MTR_6g022500 | 32.407 | 216 | 120 | 9 | 2 | 215 | 91 | 282 | 1.51e-14 | 75.9 |
MS.gene007876.t1 | MTR_6g045333 | 31.925 | 213 | 122 | 9 | 10 | 219 | 57 | 249 | 1.66e-14 | 75.9 |
MS.gene007876.t1 | MTR_7g056420 | 30.542 | 203 | 90 | 8 | 14 | 215 | 9 | 161 | 1.76e-14 | 76.6 |
MS.gene007876.t1 | MTR_7g056430 | 30.542 | 203 | 90 | 8 | 14 | 215 | 9 | 161 | 1.95e-14 | 76.3 |
MS.gene007876.t1 | MTR_5g045170 | 31.390 | 223 | 125 | 10 | 1 | 219 | 1 | 199 | 1.99e-14 | 75.1 |
MS.gene007876.t1 | MTR_8g014230 | 42.857 | 84 | 46 | 2 | 367 | 450 | 17 | 98 | 2.67e-14 | 69.3 |
MS.gene007876.t1 | MTR_4g093690 | 30.690 | 290 | 148 | 14 | 14 | 294 | 18 | 263 | 3.91e-14 | 72.8 |
MS.gene007876.t1 | MTR_7g084080 | 36.943 | 157 | 79 | 7 | 4 | 157 | 7 | 146 | 4.65e-14 | 72.8 |
MS.gene007876.t1 | MTR_7g034115 | 34.300 | 207 | 109 | 10 | 12 | 215 | 9 | 191 | 4.68e-14 | 73.9 |
MS.gene007876.t1 | MTR_7g098570 | 32.743 | 226 | 111 | 11 | 13 | 227 | 19 | 214 | 5.62e-14 | 74.3 |
MS.gene007876.t1 | MTR_3g467400 | 30.137 | 219 | 123 | 7 | 14 | 220 | 3 | 203 | 8.70e-14 | 73.2 |
MS.gene007876.t1 | MTR_3g105060 | 27.670 | 206 | 127 | 5 | 12 | 217 | 12 | 195 | 1.60e-13 | 72.4 |
MS.gene007876.t1 | MTR_2g008310 | 30.942 | 223 | 123 | 7 | 13 | 234 | 1 | 193 | 1.87e-13 | 72.0 |
MS.gene007876.t1 | MTR_7g033990 | 32.075 | 212 | 112 | 9 | 12 | 216 | 9 | 195 | 2.39e-13 | 72.0 |
MS.gene007876.t1 | MTR_2g005990 | 32.407 | 216 | 115 | 9 | 12 | 215 | 4 | 200 | 2.41e-13 | 72.0 |
MS.gene007876.t1 | MTR_7g007340 | 28.899 | 218 | 110 | 7 | 7 | 223 | 6 | 179 | 2.53e-13 | 71.6 |
MS.gene007876.t1 | MTR_5g083890 | 30.806 | 211 | 123 | 7 | 14 | 213 | 6 | 204 | 3.03e-13 | 72.0 |
MS.gene007876.t1 | MTR_4g134150 | 30.493 | 223 | 125 | 8 | 14 | 235 | 14 | 207 | 1.05e-12 | 67.8 |
MS.gene007876.t1 | MTR_1g108820 | 31.401 | 207 | 117 | 8 | 9 | 215 | 3 | 184 | 1.18e-12 | 69.3 |
MS.gene007876.t1 | MTR_3g108560 | 29.126 | 206 | 113 | 7 | 14 | 217 | 20 | 194 | 1.27e-12 | 68.9 |
MS.gene007876.t1 | MTR_7g114710 | 28.502 | 207 | 125 | 8 | 12 | 217 | 11 | 195 | 1.52e-12 | 69.3 |
MS.gene007876.t1 | MTR_4g024770 | 60.870 | 46 | 17 | 1 | 14 | 59 | 24 | 68 | 2.10e-12 | 62.8 |
MS.gene007876.t1 | MTR_3g095600 | 30.233 | 215 | 103 | 10 | 12 | 222 | 2 | 173 | 2.36e-12 | 67.8 |
MS.gene007876.t1 | MTR_3g109982 | 35.071 | 211 | 98 | 12 | 14 | 217 | 13 | 191 | 2.46e-12 | 69.7 |
MS.gene007876.t1 | MTR_6g018660 | 29.843 | 191 | 117 | 7 | 2 | 182 | 8 | 191 | 3.02e-12 | 68.2 |
MS.gene007876.t1 | MTR_1g085120 | 30.769 | 208 | 118 | 8 | 8 | 213 | 175 | 358 | 4.18e-12 | 68.2 |
MS.gene007876.t1 | MTR_3g110010 | 35.071 | 211 | 98 | 12 | 14 | 217 | 13 | 191 | 4.87e-12 | 68.6 |
MS.gene007876.t1 | MTR_2g007400 | 29.412 | 221 | 130 | 7 | 5 | 215 | 3 | 207 | 5.21e-12 | 67.8 |
MS.gene007876.t1 | MTR_5g058000 | 31.019 | 216 | 123 | 9 | 9 | 222 | 3 | 194 | 5.85e-12 | 67.4 |
MS.gene007876.t1 | MTR_5g039950 | 24.083 | 436 | 257 | 14 | 5 | 426 | 14 | 389 | 5.89e-12 | 67.8 |
MS.gene007876.t1 | MTR_7g032370 | 32.474 | 194 | 105 | 9 | 26 | 217 | 2 | 171 | 6.28e-12 | 67.0 |
MS.gene007876.t1 | MTR_7g032370 | 33.577 | 137 | 83 | 3 | 328 | 457 | 217 | 352 | 1.54e-11 | 65.9 |
MS.gene007876.t1 | MTR_5g087940 | 33.178 | 214 | 118 | 11 | 4 | 215 | 20 | 210 | 1.02e-11 | 67.0 |
MS.gene007876.t1 | MTR_3g099830 | 29.864 | 221 | 101 | 11 | 7 | 216 | 5 | 182 | 2.12e-11 | 65.9 |
MS.gene007876.t1 | MTR_1g107385 | 29.954 | 217 | 125 | 8 | 14 | 218 | 32 | 233 | 2.19e-11 | 65.9 |
MS.gene007876.t1 | MTR_3g082890 | 38.983 | 118 | 61 | 5 | 14 | 131 | 97 | 203 | 2.20e-11 | 66.2 |
MS.gene007876.t1 | MTR_5g031970 | 26.724 | 232 | 123 | 8 | 5 | 229 | 7 | 198 | 2.24e-11 | 65.5 |
MS.gene007876.t1 | MTR_7g088260 | 28.899 | 218 | 129 | 8 | 1 | 217 | 78 | 270 | 2.66e-11 | 65.9 |
MS.gene007876.t1 | MTR_8g014180 | 52.542 | 59 | 24 | 2 | 1 | 56 | 1 | 58 | 2.74e-11 | 59.3 |
MS.gene007876.t1 | MTR_7g021630 | 25.301 | 332 | 199 | 13 | 1 | 315 | 1 | 300 | 3.18e-11 | 65.1 |
MS.gene007876.t1 | MTR_3g082890 | 38.983 | 118 | 61 | 5 | 14 | 131 | 17 | 123 | 3.20e-11 | 65.5 |
MS.gene007876.t1 | MTR_7g021630 | 25.301 | 332 | 199 | 13 | 1 | 315 | 1 | 300 | 3.30e-11 | 65.1 |
MS.gene007876.t1 | MTR_1g095750 | 44.000 | 75 | 35 | 2 | 13 | 87 | 45 | 112 | 3.41e-11 | 61.6 |
MS.gene007876.t1 | MTR_6g088705 | 30.526 | 190 | 98 | 8 | 1 | 177 | 6 | 174 | 4.09e-11 | 63.2 |
MS.gene007876.t1 | MTR_3g095640 | 39.024 | 123 | 64 | 7 | 9 | 125 | 13 | 130 | 4.31e-11 | 62.0 |
MS.gene007876.t1 | MTR_7g023310 | 24.346 | 497 | 262 | 21 | 5 | 455 | 17 | 445 | 4.84e-11 | 65.1 |
MS.gene007876.t1 | MTR_7g056277 | 30.542 | 203 | 116 | 9 | 14 | 213 | 259 | 439 | 5.10e-11 | 65.1 |
MS.gene007876.t1 | MTR_3g048290 | 30.374 | 214 | 129 | 7 | 5 | 216 | 14 | 209 | 5.35e-11 | 65.1 |
MS.gene007876.t1 | MTR_7g056287 | 30.435 | 207 | 119 | 9 | 14 | 217 | 3 | 187 | 6.17e-11 | 64.3 |
MS.gene007876.t1 | MTR_0009s0080 | 29.612 | 206 | 122 | 5 | 16 | 219 | 20 | 204 | 6.85e-11 | 64.3 |
MS.gene007876.t1 | MTR_7g034090 | 33.113 | 151 | 80 | 6 | 14 | 157 | 4 | 140 | 9.04e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene007876.t1 | AT5G56420 | 29.399 | 466 | 258 | 17 | 14 | 457 | 6 | 422 | 4.46e-30 | 121 |
MS.gene007876.t1 | AT5G56420 | 29.399 | 466 | 258 | 17 | 14 | 457 | 6 | 422 | 4.46e-30 | 121 |
MS.gene007876.t1 | AT5G56420 | 29.399 | 466 | 258 | 17 | 14 | 457 | 6 | 422 | 4.46e-30 | 121 |
MS.gene007876.t1 | AT5G53840 | 26.134 | 463 | 277 | 17 | 14 | 454 | 18 | 437 | 1.28e-23 | 103 |
MS.gene007876.t1 | AT4G10400 | 27.556 | 450 | 278 | 16 | 13 | 456 | 1 | 408 | 3.28e-23 | 101 |
MS.gene007876.t1 | AT4G10400 | 27.556 | 450 | 278 | 16 | 13 | 456 | 1 | 408 | 3.28e-23 | 101 |
MS.gene007876.t1 | AT4G10400 | 27.556 | 450 | 278 | 16 | 13 | 456 | 1 | 408 | 3.28e-23 | 101 |
MS.gene007876.t1 | AT4G26340 | 26.754 | 456 | 286 | 16 | 13 | 457 | 1 | 419 | 4.09e-23 | 101 |
MS.gene007876.t1 | AT1G69630 | 25.000 | 500 | 277 | 16 | 1 | 454 | 1 | 448 | 3.45e-22 | 99.0 |
MS.gene007876.t1 | AT2G26030 | 26.316 | 475 | 281 | 19 | 14 | 454 | 4 | 443 | 6.08e-22 | 98.2 |
MS.gene007876.t1 | AT4G13985 | 25.000 | 496 | 287 | 19 | 3 | 454 | 2 | 456 | 9.23e-22 | 97.8 |
MS.gene007876.t1 | AT1G16930 | 25.880 | 483 | 288 | 19 | 4 | 457 | 8 | 449 | 2.51e-21 | 96.7 |
MS.gene007876.t1 | AT1G16930 | 25.880 | 483 | 288 | 19 | 4 | 457 | 8 | 449 | 2.51e-21 | 96.7 |
MS.gene007876.t1 | AT1G16930 | 25.880 | 483 | 288 | 19 | 4 | 457 | 8 | 449 | 2.51e-21 | 96.7 |
MS.gene007876.t1 | AT2G26030 | 26.415 | 477 | 273 | 20 | 14 | 454 | 4 | 438 | 7.55e-21 | 95.1 |
MS.gene007876.t1 | AT2G26030 | 26.415 | 477 | 273 | 20 | 14 | 454 | 4 | 438 | 7.55e-21 | 95.1 |
MS.gene007876.t1 | AT1G78750 | 26.882 | 465 | 291 | 19 | 13 | 454 | 17 | 455 | 7.70e-21 | 95.1 |
MS.gene007876.t1 | AT1G78750 | 26.882 | 465 | 291 | 19 | 13 | 454 | 17 | 455 | 7.70e-21 | 95.1 |
MS.gene007876.t1 | AT1G32375 | 26.899 | 487 | 249 | 22 | 13 | 457 | 1 | 422 | 1.25e-20 | 94.4 |
MS.gene007876.t1 | AT1G32375 | 26.899 | 487 | 249 | 22 | 13 | 457 | 1 | 422 | 1.25e-20 | 94.4 |
MS.gene007876.t1 | AT2G26860 | 29.234 | 431 | 235 | 16 | 13 | 416 | 1 | 388 | 1.47e-20 | 94.0 |
MS.gene007876.t1 | AT2G26860 | 29.234 | 431 | 235 | 16 | 13 | 416 | 1 | 388 | 1.47e-20 | 94.0 |
MS.gene007876.t1 | AT5G56560 | 28.070 | 456 | 272 | 20 | 15 | 457 | 6 | 418 | 3.40e-20 | 92.8 |
MS.gene007876.t1 | AT5G44950 | 28.510 | 463 | 267 | 23 | 14 | 448 | 4 | 430 | 7.01e-20 | 92.0 |
MS.gene007876.t1 | AT5G56400 | 25.751 | 466 | 283 | 17 | 13 | 457 | 32 | 455 | 1.16e-19 | 91.7 |
MS.gene007876.t1 | AT5G60610 | 25.581 | 430 | 252 | 14 | 13 | 421 | 1 | 383 | 2.56e-19 | 90.1 |
MS.gene007876.t1 | AT5G60610 | 25.581 | 430 | 252 | 14 | 13 | 421 | 1 | 383 | 2.56e-19 | 90.1 |
MS.gene007876.t1 | AT5G53635 | 26.237 | 465 | 278 | 16 | 16 | 456 | 2 | 425 | 3.53e-19 | 89.7 |
MS.gene007876.t1 | AT5G22720 | 25.000 | 480 | 285 | 16 | 14 | 456 | 23 | 464 | 3.84e-19 | 90.1 |
MS.gene007876.t1 | AT4G00160 | 28.753 | 473 | 260 | 19 | 14 | 456 | 16 | 441 | 8.31e-19 | 89.0 |
MS.gene007876.t1 | AT3G42770 | 28.200 | 461 | 260 | 20 | 16 | 449 | 1 | 417 | 1.10e-18 | 89.0 |
MS.gene007876.t1 | AT3G60040 | 27.317 | 410 | 254 | 14 | 14 | 406 | 13 | 395 | 1.42e-18 | 89.0 |
MS.gene007876.t1 | AT3G60040 | 27.317 | 410 | 254 | 14 | 14 | 406 | 232 | 614 | 2.07e-18 | 88.6 |
MS.gene007876.t1 | AT3G60040 | 27.317 | 410 | 254 | 14 | 14 | 406 | 233 | 615 | 2.09e-18 | 88.6 |
MS.gene007876.t1 | AT3G60040 | 27.317 | 410 | 254 | 14 | 14 | 406 | 230 | 612 | 2.70e-18 | 88.2 |
MS.gene007876.t1 | AT3G60040 | 27.317 | 410 | 254 | 14 | 14 | 406 | 232 | 614 | 2.86e-18 | 88.2 |
MS.gene007876.t1 | AT1G06630 | 30.603 | 232 | 136 | 9 | 14 | 238 | 12 | 225 | 3.24e-18 | 85.5 |
MS.gene007876.t1 | AT1G66310 | 26.078 | 464 | 283 | 16 | 11 | 454 | 16 | 439 | 4.17e-18 | 86.7 |
MS.gene007876.t1 | AT4G26350 | 25.820 | 488 | 259 | 20 | 13 | 457 | 1 | 428 | 4.18e-18 | 86.7 |
MS.gene007876.t1 | AT1G06630 | 30.603 | 232 | 136 | 9 | 14 | 238 | 12 | 225 | 5.22e-18 | 86.3 |
MS.gene007876.t1 | AT1G06630 | 30.603 | 232 | 136 | 9 | 14 | 238 | 12 | 225 | 5.22e-18 | 86.3 |
MS.gene007876.t1 | AT1G06630 | 30.603 | 232 | 136 | 9 | 14 | 238 | 12 | 225 | 5.22e-18 | 86.3 |
MS.gene007876.t1 | AT1G06630 | 30.603 | 232 | 136 | 9 | 14 | 238 | 12 | 225 | 5.22e-18 | 86.3 |
MS.gene007876.t1 | AT1G06630 | 30.603 | 232 | 136 | 9 | 14 | 238 | 12 | 225 | 6.55e-18 | 85.5 |
MS.gene007876.t1 | AT1G06630 | 30.603 | 232 | 136 | 9 | 14 | 238 | 12 | 225 | 6.55e-18 | 85.5 |
MS.gene007876.t1 | AT3G26922 | 32.189 | 233 | 125 | 10 | 14 | 240 | 14 | 219 | 6.82e-18 | 84.7 |
MS.gene007876.t1 | AT3G26922 | 32.189 | 233 | 125 | 10 | 14 | 240 | 14 | 219 | 6.82e-18 | 84.7 |
MS.gene007876.t1 | AT1G06630 | 31.064 | 235 | 131 | 10 | 14 | 238 | 21 | 234 | 6.86e-18 | 85.9 |
MS.gene007876.t1 | AT1G06630 | 31.707 | 205 | 123 | 7 | 14 | 215 | 12 | 202 | 1.02e-17 | 85.9 |
MS.gene007876.t1 | AT3G59200 | 32.212 | 208 | 114 | 8 | 14 | 215 | 7 | 193 | 2.63e-17 | 83.6 |
MS.gene007876.t1 | AT5G22700 | 27.670 | 412 | 236 | 19 | 14 | 419 | 43 | 398 | 3.03e-17 | 84.0 |
MS.gene007876.t1 | AT4G09920 | 31.527 | 203 | 118 | 7 | 13 | 215 | 1 | 182 | 7.16e-17 | 81.3 |
MS.gene007876.t1 | AT4G09920 | 31.527 | 203 | 118 | 7 | 13 | 215 | 1 | 182 | 7.16e-17 | 81.3 |
MS.gene007876.t1 | AT4G09920 | 31.527 | 203 | 118 | 7 | 13 | 215 | 1 | 182 | 7.16e-17 | 81.3 |
MS.gene007876.t1 | AT5G22700 | 27.294 | 436 | 248 | 20 | 14 | 419 | 6 | 402 | 7.88e-17 | 82.8 |
MS.gene007876.t1 | AT5G22700 | 27.294 | 436 | 248 | 20 | 14 | 419 | 6 | 402 | 7.88e-17 | 82.8 |
MS.gene007876.t1 | AT5G22700 | 27.294 | 436 | 248 | 20 | 14 | 419 | 6 | 402 | 7.88e-17 | 82.8 |
MS.gene007876.t1 | AT5G22700 | 27.294 | 436 | 248 | 20 | 14 | 419 | 6 | 402 | 7.88e-17 | 82.8 |
MS.gene007876.t1 | AT1G13780 | 26.033 | 484 | 274 | 22 | 14 | 454 | 10 | 452 | 7.92e-17 | 82.8 |
MS.gene007876.t1 | AT3G59200 | 32.212 | 208 | 114 | 8 | 14 | 215 | 7 | 193 | 8.50e-17 | 83.2 |
MS.gene007876.t1 | AT4G09920 | 31.527 | 203 | 118 | 7 | 13 | 215 | 1 | 182 | 9.74e-17 | 81.3 |
MS.gene007876.t1 | AT4G09920 | 31.527 | 203 | 118 | 7 | 13 | 215 | 1 | 182 | 9.74e-17 | 81.3 |
MS.gene007876.t1 | AT5G56810 | 29.004 | 462 | 262 | 19 | 14 | 454 | 15 | 431 | 9.88e-17 | 82.4 |
MS.gene007876.t1 | AT5G22700 | 27.294 | 436 | 248 | 20 | 14 | 419 | 43 | 439 | 1.09e-16 | 82.8 |
MS.gene007876.t1 | AT5G22660 | 25.625 | 480 | 269 | 21 | 14 | 454 | 13 | 443 | 3.65e-16 | 80.9 |
MS.gene007876.t1 | AT4G13965 | 27.233 | 459 | 268 | 20 | 14 | 454 | 10 | 420 | 7.08e-16 | 79.7 |
MS.gene007876.t1 | AT5G50270 | 28.211 | 436 | 247 | 18 | 13 | 424 | 1 | 394 | 1.67e-15 | 78.6 |
MS.gene007876.t1 | AT3G52680 | 28.541 | 473 | 263 | 21 | 14 | 457 | 21 | 447 | 1.79e-15 | 79.0 |
MS.gene007876.t1 | AT5G56380 | 23.881 | 469 | 303 | 15 | 13 | 457 | 1 | 439 | 3.60e-15 | 77.8 |
MS.gene007876.t1 | AT5G56380 | 23.881 | 469 | 303 | 15 | 13 | 457 | 1 | 439 | 3.60e-15 | 77.8 |
MS.gene007876.t1 | AT5G18780 | 27.754 | 472 | 266 | 19 | 14 | 454 | 11 | 438 | 3.90e-15 | 77.8 |
MS.gene007876.t1 | AT5G18780 | 27.754 | 472 | 266 | 19 | 14 | 454 | 11 | 438 | 3.90e-15 | 77.8 |
MS.gene007876.t1 | AT4G14103 | 32.068 | 237 | 131 | 12 | 14 | 245 | 8 | 219 | 6.06e-15 | 77.0 |
MS.gene007876.t1 | AT4G14103 | 32.218 | 239 | 128 | 12 | 14 | 245 | 8 | 219 | 8.98e-15 | 76.3 |
MS.gene007876.t1 | AT4G14103 | 32.218 | 239 | 128 | 12 | 14 | 245 | 8 | 219 | 8.98e-15 | 76.3 |
MS.gene007876.t1 | AT2G29930 | 24.950 | 497 | 269 | 24 | 14 | 456 | 12 | 458 | 9.70e-15 | 76.6 |
MS.gene007876.t1 | AT2G29930 | 24.950 | 497 | 269 | 24 | 14 | 456 | 12 | 458 | 9.70e-15 | 76.6 |
MS.gene007876.t1 | AT3G58820 | 35.849 | 159 | 87 | 6 | 13 | 163 | 1 | 152 | 1.61e-14 | 75.5 |
MS.gene007876.t1 | AT5G44940 | 26.432 | 454 | 243 | 17 | 14 | 457 | 5 | 377 | 1.73e-14 | 75.1 |
MS.gene007876.t1 | AT5G41840 | 29.767 | 215 | 120 | 9 | 14 | 215 | 14 | 210 | 1.88e-14 | 75.9 |
MS.gene007876.t1 | AT3G59190 | 31.754 | 211 | 114 | 8 | 14 | 215 | 12 | 201 | 2.31e-14 | 75.5 |
MS.gene007876.t1 | AT3G59190 | 31.754 | 211 | 114 | 8 | 14 | 215 | 12 | 201 | 2.50e-14 | 74.7 |
MS.gene007876.t1 | AT5G56370 | 24.947 | 469 | 278 | 18 | 13 | 456 | 1 | 420 | 2.89e-14 | 74.7 |
MS.gene007876.t1 | AT5G56370 | 24.947 | 469 | 278 | 18 | 13 | 456 | 1 | 420 | 2.89e-14 | 74.7 |
MS.gene007876.t1 | AT5G56440 | 32.212 | 208 | 110 | 7 | 13 | 215 | 1 | 182 | 3.23e-14 | 74.7 |
MS.gene007876.t1 | AT5G22670 | 24.532 | 481 | 271 | 19 | 14 | 454 | 11 | 439 | 4.44e-14 | 74.3 |
MS.gene007876.t1 | AT5G56690 | 25.721 | 416 | 243 | 18 | 16 | 405 | 4 | 379 | 4.80e-14 | 73.9 |
MS.gene007876.t1 | AT3G03040 | 34.884 | 172 | 98 | 5 | 13 | 179 | 1 | 163 | 1.03e-13 | 73.6 |
MS.gene007876.t1 | AT4G14096 | 24.788 | 472 | 296 | 22 | 14 | 456 | 8 | 449 | 1.46e-13 | 72.8 |
MS.gene007876.t1 | AT4G14096 | 24.788 | 472 | 296 | 22 | 14 | 456 | 8 | 449 | 1.46e-13 | 72.8 |
MS.gene007876.t1 | AT2G04230 | 26.464 | 427 | 251 | 20 | 14 | 416 | 13 | 400 | 2.77e-13 | 72.0 |
MS.gene007876.t1 | AT3G44060 | 30.000 | 200 | 123 | 5 | 16 | 215 | 1 | 183 | 3.37e-13 | 71.6 |
MS.gene007876.t1 | AT3G59240 | 29.185 | 233 | 136 | 9 | 14 | 238 | 8 | 219 | 3.52e-13 | 72.0 |
MS.gene007876.t1 | AT3G59210 | 32.039 | 206 | 117 | 7 | 14 | 215 | 7 | 193 | 4.62e-13 | 71.6 |
MS.gene007876.t1 | AT3G59210 | 32.039 | 206 | 117 | 7 | 14 | 215 | 7 | 193 | 4.62e-13 | 71.6 |
MS.gene007876.t1 | AT3G59210 | 32.039 | 206 | 117 | 7 | 14 | 215 | 7 | 193 | 4.62e-13 | 71.6 |
MS.gene007876.t1 | AT3G59210 | 32.039 | 206 | 117 | 7 | 14 | 215 | 7 | 193 | 4.62e-13 | 71.6 |
MS.gene007876.t1 | AT3G59210 | 32.039 | 206 | 117 | 7 | 14 | 215 | 7 | 193 | 4.62e-13 | 71.6 |
MS.gene007876.t1 | AT2G42720 | 30.519 | 308 | 171 | 16 | 13 | 310 | 1 | 275 | 6.43e-13 | 70.9 |
MS.gene007876.t1 | AT1G05080 | 25.751 | 466 | 283 | 19 | 14 | 456 | 13 | 438 | 7.66e-13 | 70.5 |
MS.gene007876.t1 | AT1G48400 | 32.057 | 209 | 112 | 10 | 14 | 215 | 10 | 195 | 8.44e-13 | 70.5 |
MS.gene007876.t1 | AT1G48400 | 32.057 | 209 | 112 | 10 | 14 | 215 | 10 | 195 | 8.55e-13 | 70.9 |
MS.gene007876.t1 | AT1G55660 | 31.100 | 209 | 119 | 7 | 11 | 215 | 50 | 237 | 1.30e-12 | 70.1 |
MS.gene007876.t1 | AT1G55660 | 30.986 | 213 | 122 | 7 | 7 | 215 | 46 | 237 | 1.41e-12 | 69.3 |
MS.gene007876.t1 | AT3G59000 | 32.558 | 172 | 105 | 4 | 13 | 178 | 1 | 167 | 1.56e-12 | 69.7 |
MS.gene007876.t1 | AT1G66300 | 23.690 | 477 | 298 | 16 | 3 | 454 | 18 | 453 | 1.59e-12 | 69.7 |
MS.gene007876.t1 | AT4G00315 | 31.884 | 207 | 116 | 7 | 13 | 215 | 1 | 186 | 1.80e-12 | 69.3 |
MS.gene007876.t1 | AT5G56700 | 28.440 | 327 | 180 | 15 | 115 | 421 | 55 | 347 | 2.13e-12 | 68.9 |
MS.gene007876.t1 | AT4G15060 | 26.034 | 411 | 224 | 17 | 13 | 394 | 25 | 384 | 2.47e-12 | 68.9 |
MS.gene007876.t1 | AT3G03030 | 32.044 | 181 | 107 | 5 | 13 | 185 | 1 | 173 | 3.55e-12 | 67.8 |
MS.gene007876.t1 | AT3G03030 | 32.044 | 181 | 107 | 5 | 13 | 185 | 1 | 173 | 5.61e-12 | 68.2 |
MS.gene007876.t1 | AT3G59160 | 29.464 | 224 | 121 | 7 | 14 | 215 | 13 | 221 | 5.93e-12 | 67.8 |
MS.gene007876.t1 | AT5G38392 | 29.630 | 216 | 117 | 10 | 13 | 215 | 1 | 194 | 6.17e-12 | 65.5 |
MS.gene007876.t1 | AT3G58940 | 29.907 | 214 | 122 | 7 | 13 | 215 | 1 | 197 | 1.11e-11 | 67.4 |
MS.gene007876.t1 | AT3G58940 | 29.907 | 214 | 122 | 7 | 13 | 215 | 1 | 197 | 1.11e-11 | 67.4 |
MS.gene007876.t1 | AT5G18780 | 35.503 | 169 | 93 | 7 | 14 | 181 | 11 | 164 | 1.18e-11 | 66.6 |
MS.gene007876.t1 | AT5G18780 | 35.503 | 169 | 93 | 7 | 14 | 181 | 11 | 164 | 1.18e-11 | 66.6 |
MS.gene007876.t1 | AT3G51530 | 26.291 | 426 | 243 | 20 | 14 | 416 | 30 | 407 | 1.58e-11 | 66.6 |
MS.gene007876.t1 | AT3G26922 | 29.954 | 217 | 119 | 10 | 30 | 240 | 1 | 190 | 1.66e-11 | 65.1 |
MS.gene007876.t1 | AT3G26922 | 29.954 | 217 | 119 | 10 | 30 | 240 | 1 | 190 | 1.66e-11 | 65.1 |
MS.gene007876.t1 | AT4G00320 | 28.959 | 221 | 113 | 10 | 14 | 215 | 13 | 208 | 3.56e-11 | 65.5 |
MS.gene007876.t1 | AT5G41630 | 28.372 | 215 | 120 | 9 | 14 | 215 | 12 | 205 | 4.12e-11 | 65.1 |
MS.gene007876.t1 | AT3G49030 | 25.055 | 455 | 268 | 18 | 14 | 456 | 21 | 414 | 4.62e-11 | 65.1 |
MS.gene007876.t1 | AT5G38390 | 31.373 | 204 | 110 | 8 | 13 | 215 | 1 | 175 | 5.53e-11 | 64.7 |
MS.gene007876.t1 | AT3G59170 | 29.018 | 224 | 124 | 7 | 14 | 215 | 7 | 217 | 5.60e-11 | 65.1 |
MS.gene007876.t1 | AT5G56370 | 30.622 | 209 | 112 | 9 | 13 | 216 | 1 | 181 | 9.53e-11 | 63.5 |
Find 110 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCGCCGGTGGCGCCACCTT+TGG | 0.219688 | 8.3:+47876570 | MS.gene007876:CDS |
GGGAACTCTGGTCAAGAAAT+AGG | 0.266225 | 8.3:-47878354 | None:intergenic |
TGATGCAAATTGCAAAATTC+TGG | 0.267481 | 8.3:-47878766 | None:intergenic |
TAGAACAGTTCTTGTTTGTT+AGG | 0.285758 | 8.3:-47879199 | None:intergenic |
TTCGAATGTGGCGAGATTTA+CGG | 0.286490 | 8.3:-47876697 | None:intergenic |
AGGTGGGATTCAAGACATTT+AGG | 0.296428 | 8.3:-47879056 | None:intergenic |
TCGCCGGTGGCGCCACCTTT+GGG | 0.306009 | 8.3:+47876571 | MS.gene007876:CDS |
AACATTGACATTGAGGATTT+CGG | 0.318146 | 8.3:+47878254 | MS.gene007876:CDS |
GGTCGTCATGACGGAGGTTT+TGG | 0.329588 | 8.3:-47876537 | None:intergenic |
GAAAGTCGAATTCAGCATAT+TGG | 0.336684 | 8.3:+47878226 | MS.gene007876:CDS |
TCAATACTTGTCTTTCTCTC+TGG | 0.353157 | 8.3:+47878293 | MS.gene007876:CDS |
AAACCCACATTTGGCATCAT+TGG | 0.367842 | 8.3:+47878485 | MS.gene007876:CDS |
TGCAACATCAAACCCACATT+TGG | 0.375079 | 8.3:+47878476 | MS.gene007876:CDS |
AAACTGCCATGGTGATGATA+TGG | 0.399008 | 8.3:+47876835 | MS.gene007876:CDS |
ACTTTCAACATCTTTAATGA+TGG | 0.412204 | 8.3:-47878209 | None:intergenic |
TTTGGCTCCCATGTTCTTGA+AGG | 0.413263 | 8.3:-47879020 | None:intergenic |
ATCAGTTAATTTCAACCTCT+TGG | 0.417906 | 8.3:-47878390 | None:intergenic |
CTGACCTATATTCATATAGA+AGG | 0.421134 | 8.3:+47879077 | MS.gene007876:CDS |
TTAGGAACTGTTGTTGACTT+TGG | 0.424286 | 8.3:-47879038 | None:intergenic |
ATATCCTTCTATATGAATAT+AGG | 0.426826 | 8.3:-47879081 | None:intergenic |
CTCTTGGCAGAAGGTGGAAC+GGG | 0.427619 | 8.3:-47878374 | None:intergenic |
CTCAACTACCTCCGAGATCT+AGG | 0.429478 | 8.3:+47878581 | MS.gene007876:CDS |
CAGCTTAGTCAAATTTAAGT+TGG | 0.434797 | 8.3:-47879262 | None:intergenic |
GGAACTCTGGTCAAGAAATA+GGG | 0.443858 | 8.3:-47878353 | None:intergenic |
CAGAAGATTTGTGTTGAAGC+AGG | 0.446586 | 8.3:-47878806 | None:intergenic |
GAAATAGATTCTGATGGGCT+TGG | 0.454859 | 8.3:+47878437 | MS.gene007876:CDS |
CCACATGTAGACACATTCTC+CGG | 0.456229 | 8.3:-47876762 | None:intergenic |
GGGATTCCTGCAGTTGCAGT+TGG | 0.464051 | 8.3:-47876627 | None:intergenic |
GCTCCCAAAGGTGGCGCCAC+CGG | 0.466109 | 8.3:-47876574 | None:intergenic |
ATGTGGCATAGGAGTGAGTC+TGG | 0.471071 | 8.3:-47876497 | None:intergenic |
GCCCATCAGAATCTATTTCA+AGG | 0.471743 | 8.3:-47878433 | None:intergenic |
GGATTTCGGCAAACACCTTA+CGG | 0.472350 | 8.3:+47878268 | MS.gene007876:CDS |
CAAGAAATAGGGAGAAAAGT+AGG | 0.492659 | 8.3:-47878342 | None:intergenic |
ATCTTGAAGGTGGGGTCCAA+TGG | 0.495026 | 8.3:-47876795 | None:intergenic |
TTACCTGAGGGAAACGAGAT+TGG | 0.499649 | 8.3:-47876888 | None:intergenic |
CTTCTATATGAATATAGGTC+AGG | 0.501363 | 8.3:-47879076 | None:intergenic |
GGAACACAACATTGACATTG+AGG | 0.505951 | 8.3:+47878247 | MS.gene007876:CDS |
GCACCAATCTCGTTTCCCTC+AGG | 0.507292 | 8.3:+47876885 | MS.gene007876:CDS |
AACTGTCACCTTCAAGAACA+TGG | 0.510013 | 8.3:+47879012 | MS.gene007876:CDS |
GTAAACATCGGAGGTGCAGC+AGG | 0.514352 | 8.3:-47876732 | None:intergenic |
ATTCATATAGAAGGATATCA+AGG | 0.515119 | 8.3:+47879086 | MS.gene007876:CDS |
GTATCTAGAGTTTCGAGTAC+GGG | 0.521737 | 8.3:-47878320 | None:intergenic |
AAATTCTGGATAATTTAGAA+TGG | 0.522156 | 8.3:-47878752 | None:intergenic |
ATGTGGGTCCGTGCTGCCAT+TGG | 0.525161 | 8.3:+47876779 | MS.gene007876:CDS |
CTCGGAGGTAGTTGAGCATA+GGG | 0.525490 | 8.3:-47878574 | None:intergenic |
CCGGAGAATGTGTCTACATG+TGG | 0.528018 | 8.3:+47876762 | MS.gene007876:CDS |
GGTATCTAGAGTTTCGAGTA+CGG | 0.529317 | 8.3:-47878321 | None:intergenic |
AGAAGGTGGAACGGGAACTC+TGG | 0.530093 | 8.3:-47878366 | None:intergenic |
GATAAATTCACTTTCACGCA+AGG | 0.530491 | 8.3:-47878549 | None:intergenic |
TAACTGATGTGAAATTCTCA+TGG | 0.534368 | 8.3:+47878405 | MS.gene007876:CDS |
CATTGGCGACTTGCAGAGCA+TGG | 0.538592 | 8.3:+47878502 | MS.gene007876:CDS |
TGCCTTGAAATAGATTCTGA+TGG | 0.542078 | 8.3:+47878431 | MS.gene007876:CDS |
GTAAATCACCACCTAGATCT+CGG | 0.543700 | 8.3:-47878592 | None:intergenic |
TTCAACCTCTTGGCAGAAGG+TGG | 0.544820 | 8.3:-47878380 | None:intergenic |
TCTCATAATTCAAAGTAGCA+AGG | 0.549803 | 8.3:+47878864 | MS.gene007876:CDS |
GAGAGACAAATCTTGAAGGT+GGG | 0.551283 | 8.3:-47876804 | None:intergenic |
GTCGCCAATGATGCCAAATG+TGG | 0.552977 | 8.3:-47878489 | None:intergenic |
ACGAGTCCAACTGCAACTGC+AGG | 0.555167 | 8.3:+47876621 | MS.gene007876:CDS |
GGAATGATAAGATGTGGCAT+AGG | 0.555384 | 8.3:-47876508 | None:intergenic |
AATTTCAACCTCTTGGCAGA+AGG | 0.555823 | 8.3:-47878383 | None:intergenic |
TATTGAGAGACAAATCTTGA+AGG | 0.559357 | 8.3:-47876808 | None:intergenic |
GATGGGCTTGGTATAGAGTA+CGG | 0.560809 | 8.3:+47878449 | MS.gene007876:CDS |
CCGTTCCACCTTCTGCCAAG+AGG | 0.561402 | 8.3:+47878375 | MS.gene007876:CDS |
TCTCGGAGGTAGTTGAGCAT+AGG | 0.566965 | 8.3:-47878575 | None:intergenic |
CTCAATATTACAAACTGCCA+TGG | 0.567570 | 8.3:+47876824 | MS.gene007876:CDS |
AATGAGACTGGTCGTCATGA+CGG | 0.569460 | 8.3:-47876546 | None:intergenic |
TTCTGGATAATTTAGAATGG+AGG | 0.569635 | 8.3:-47878749 | None:intergenic |
GTGCAATTCAAGAGGGAAGG+AGG | 0.570678 | 8.3:-47876866 | None:intergenic |
CCTCTTGGCAGAAGGTGGAA+CGG | 0.574775 | 8.3:-47878375 | None:intergenic |
GCCTTGAAATAGATTCTGAT+GGG | 0.575815 | 8.3:+47878432 | MS.gene007876:CDS |
AGAGACAAATCTTGAAGGTG+GGG | 0.579971 | 8.3:-47876803 | None:intergenic |
CGAGATTGGTGCAATTCAAG+AGG | 0.585120 | 8.3:-47876874 | None:intergenic |
AGAAGATTTGTGTTGAAGCA+GGG | 0.585924 | 8.3:-47878805 | None:intergenic |
AAGATTAACTGATATACCAA+GGG | 0.586408 | 8.3:+47879226 | MS.gene007876:CDS |
TGAGAGACAAATCTTGAAGG+TGG | 0.586669 | 8.3:-47876805 | None:intergenic |
CGTTTAGATGCTCCCAAAGG+TGG | 0.589564 | 8.3:-47876583 | None:intergenic |
AGACAAGTATTGAATCCGTA+AGG | 0.589853 | 8.3:-47878283 | None:intergenic |
CTATATGAATATAGGTCAGG+TGG | 0.596905 | 8.3:-47879073 | None:intergenic |
CACATGTAGACACATTCTCC+GGG | 0.602843 | 8.3:-47876761 | None:intergenic |
AAAGATTAACTGATATACCA+AGG | 0.603237 | 8.3:+47879225 | MS.gene007876:CDS |
TGCAATTCAAGAGGGAAGGA+GGG | 0.610260 | 8.3:-47876865 | None:intergenic |
TGGCATGTGACAGAGCCCCT+TGG | 0.611510 | 8.3:-47879242 | None:intergenic |
CCACCGGCGAGAAATGAGAC+TGG | 0.613340 | 8.3:-47876558 | None:intergenic |
TTGGTGCAATTCAAGAGGGA+AGG | 0.614725 | 8.3:-47876869 | None:intergenic |
GGTGGGGTCCAATGGCAGCA+CGG | 0.623491 | 8.3:-47876787 | None:intergenic |
CGGAGAATGTGTCTACATGT+GGG | 0.624898 | 8.3:+47876763 | MS.gene007876:CDS |
CCAGTCTCATTTCTCGCCGG+TGG | 0.626497 | 8.3:+47876558 | MS.gene007876:CDS |
TCTGCGTCATTCGACATCAA+AGG | 0.627655 | 8.3:+47878622 | MS.gene007876:CDS |
TATATGAATATAGGTCAGGT+GGG | 0.636912 | 8.3:-47879072 | None:intergenic |
TCGCCAATGATGCCAAATGT+GGG | 0.638534 | 8.3:-47878488 | None:intergenic |
ACAACGCCGATGTCATCGAT+AGG | 0.638817 | 8.3:+47876462 | MS.gene007876:CDS |
TAGGAAGGAATGATAAGATG+TGG | 0.639583 | 8.3:-47876514 | None:intergenic |
CGACCAGTCTCATTTCTCGC+CGG | 0.645753 | 8.3:+47876555 | MS.gene007876:CDS |
TCCGGGAAAACTGTAAACAT+CGG | 0.646181 | 8.3:-47876744 | None:intergenic |
GAGATTGGTGCAATTCAAGA+GGG | 0.651966 | 8.3:-47876873 | None:intergenic |
TATCTAGAGTTTCGAGTACG+GGG | 0.652748 | 8.3:-47878319 | None:intergenic |
GAATGTGGCGAGATTTACGG+AGG | 0.663346 | 8.3:-47876694 | None:intergenic |
ACTGTCACCTTCAAGAACAT+GGG | 0.664797 | 8.3:+47879013 | MS.gene007876:CDS |
ACTCATCCTATCGATGACAT+CGG | 0.671936 | 8.3:-47876468 | None:intergenic |
TTTAGAATGGAGGTGCGAAG+CGG | 0.678446 | 8.3:-47878739 | None:intergenic |
GATAAACCATATCATCACCA+TGG | 0.684982 | 8.3:-47876841 | None:intergenic |
GGGAAAACTGTAAACATCGG+AGG | 0.685985 | 8.3:-47876741 | None:intergenic |
AGACGTTTAGATGCTCCCAA+AGG | 0.690304 | 8.3:-47876586 | None:intergenic |
AATGTGGCGAGATTTACGGA+GGG | 0.699134 | 8.3:-47876693 | None:intergenic |
GAGACTGGTCGTCATGACGG+AGG | 0.708481 | 8.3:-47876543 | None:intergenic |
AACTACCTCCGAGATCTAGG+TGG | 0.714851 | 8.3:+47878584 | MS.gene007876:CDS |
AGATTAACTGATATACCAAG+GGG | 0.725053 | 8.3:+47879227 | MS.gene007876:CDS |
TGGCGACTTGCAGAGCATGG+AGG | 0.730260 | 8.3:+47878505 | MS.gene007876:CDS |
AATCACCACCTAGATCTCGG+AGG | 0.782019 | 8.3:-47878589 | None:intergenic |
GGGCTTGGTATAGAGTACGG+TGG | 0.786992 | 8.3:+47878452 | MS.gene007876:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATATTTAATCATATGAAAT+TGG | + | chr8.3:47877720-47877739 | MS.gene007876:intron | 10.0% |
!! | CATTAAATAACTAATGTATT+TGG | + | chr8.3:47877985-47878004 | MS.gene007876:intron | 15.0% |
!!! | ACTTCATAAAAATGAATTTT+TGG | - | chr8.3:47877837-47877856 | None:intergenic | 15.0% |
!!! | GGTTAAATTAAATCAATTTT+TGG | + | chr8.3:47878902-47878921 | MS.gene007876:intron | 15.0% |
!! | AAATTCTGGATAATTTAGAA+TGG | - | chr8.3:47878755-47878774 | None:intergenic | 20.0% |
!! | ATATCCTTCTATATGAATAT+AGG | - | chr8.3:47879084-47879103 | None:intergenic | 20.0% |
!! | TAAATATGGAAATGAAAACT+TGG | + | chr8.3:47877759-47877778 | MS.gene007876:intron | 20.0% |
!!! | AAGGTGAAGTTTTATTATTA+TGG | + | chr8.3:47878641-47878660 | MS.gene007876:intron | 20.0% |
!!! | CAGAATGTTGAAATTTTAAA+TGG | - | chr8.3:47878178-47878197 | None:intergenic | 20.0% |
!!! | CATTTTTTTTGATACTTCAA+TGG | + | chr8.3:47879175-47879194 | MS.gene007876:CDS | 20.0% |
!!! | GAATCAATTAGAATCAATTT+TGG | + | chr8.3:47877054-47877073 | MS.gene007876:intron | 20.0% |
!!! | TAAGCAAAAATCAACTTTTT+AGG | - | chr8.3:47878049-47878068 | None:intergenic | 20.0% |
!!! | TCAATTTTAAACTTGATATC+CGG | - | chr8.3:47877658-47877677 | None:intergenic | 20.0% |
!!! | TTACAAAAAAAGGTTTTGTA+TGG | - | chr8.3:47877183-47877202 | None:intergenic | 20.0% |
!!! | TTTGGATATCATTTTCTTTA+TGG | - | chr8.3:47877819-47877838 | None:intergenic | 20.0% |
! | AAAGATTAACTGATATACCA+AGG | + | chr8.3:47879225-47879244 | MS.gene007876:CDS | 25.0% |
! | AAGATTAACTGATATACCAA+GGG | + | chr8.3:47879226-47879245 | MS.gene007876:CDS | 25.0% |
! | AATATAATTGAGTCATTGTG+TGG | + | chr8.3:47878971-47878990 | MS.gene007876:intron | 25.0% |
! | ACTTTCAACATCTTTAATGA+TGG | - | chr8.3:47878212-47878231 | None:intergenic | 25.0% |
! | ATTCATATAGAAGGATATCA+AGG | + | chr8.3:47879086-47879105 | MS.gene007876:CDS | 25.0% |
! | TAATATATATATACTCCCTC+CGG | + | chr8.3:47877928-47877947 | MS.gene007876:intron | 25.0% |
! | TTCTTTATGGTGCATATATT+TGG | - | chr8.3:47877806-47877825 | None:intergenic | 25.0% |
!! | TTTTTGCTTATAAATGTGAC+CGG | + | chr8.3:47878059-47878078 | MS.gene007876:intron | 25.0% |
!!! | GCATTGTCATGTTTTAAATA+TGG | + | chr8.3:47877745-47877764 | MS.gene007876:intron | 25.0% |
AACATTGACATTGAGGATTT+CGG | + | chr8.3:47878254-47878273 | MS.gene007876:CDS | 30.0% | |
AGATTAACTGATATACCAAG+GGG | + | chr8.3:47879227-47879246 | MS.gene007876:CDS | 30.0% | |
ATATATATATACACTCCCTC+CGG | - | chr8.3:47878081-47878100 | None:intergenic | 30.0% | |
ATCAGTTAATTTCAACCTCT+TGG | - | chr8.3:47878393-47878412 | None:intergenic | 30.0% | |
CTGACCTATATTCATATAGA+AGG | + | chr8.3:47879077-47879096 | MS.gene007876:CDS | 30.0% | |
CTTCTATATGAATATAGGTC+AGG | - | chr8.3:47879079-47879098 | None:intergenic | 30.0% | |
TAACCCAACACAAAATTGAT+GGG | - | chr8.3:47877551-47877570 | None:intergenic | 30.0% | |
TAACTGATGTGAAATTCTCA+TGG | + | chr8.3:47878405-47878424 | MS.gene007876:CDS | 30.0% | |
TATATGAATATAGGTCAGGT+GGG | - | chr8.3:47879075-47879094 | None:intergenic | 30.0% | |
TATTGAGAGACAAATCTTGA+AGG | - | chr8.3:47876811-47876830 | None:intergenic | 30.0% | |
TCTCATAATTCAAAGTAGCA+AGG | + | chr8.3:47878864-47878883 | MS.gene007876:CDS | 30.0% | |
TGATGCAAATTGCAAAATTC+TGG | - | chr8.3:47878769-47878788 | None:intergenic | 30.0% | |
! | AATGTTTTCAAAAGACAGGT+TGG | - | chr8.3:47878136-47878155 | None:intergenic | 30.0% |
! | GCAAACTTTCTGAACTTTTT+GGG | - | chr8.3:47876650-47876669 | None:intergenic | 30.0% |
! | GCTGAATATATTTTGCGTAA+CGG | + | chr8.3:47879131-47879150 | MS.gene007876:CDS | 30.0% |
! | GTGATGAAAGCATGAAATTA+GGG | - | chr8.3:47876914-47876933 | None:intergenic | 30.0% |
! | GTTTTGCTTATAAATGTGAC+CGG | - | chr8.3:47877950-47877969 | None:intergenic | 30.0% |
! | TAGAACAGTTCTTGTTTGTT+AGG | - | chr8.3:47879202-47879221 | None:intergenic | 30.0% |
! | TGAAAACATTGCAGTCTTTT+TGG | + | chr8.3:47878146-47878165 | MS.gene007876:intron | 30.0% |
! | TGAGATGAAATTTTCGAATG+TGG | - | chr8.3:47876712-47876731 | None:intergenic | 30.0% |
! | TGCAAACTTTCTGAACTTTT+TGG | - | chr8.3:47876651-47876670 | None:intergenic | 30.0% |
! | TGTGATGAAAGCATGAAATT+AGG | - | chr8.3:47876915-47876934 | None:intergenic | 30.0% |
! | TTCTGGATAATTTAGAATGG+AGG | - | chr8.3:47878752-47878771 | None:intergenic | 30.0% |
AAACACAACTCTCTTGTAGT+CGG | - | chr8.3:47876997-47877016 | None:intergenic | 35.0% | |
AACCCAACACAAAATTGATG+GGG | - | chr8.3:47877550-47877569 | None:intergenic | 35.0% | |
AATTGAGCTACTAGCTCAAT+TGG | + | chr8.3:47877339-47877358 | MS.gene007876:intron | 35.0% | |
AATTGAGCTAGTAGCTCAAT+TGG | - | chr8.3:47877340-47877359 | None:intergenic | 35.0% | |
AGAAGATTTGTGTTGAAGCA+GGG | - | chr8.3:47878808-47878827 | None:intergenic | 35.0% | |
ATGAAATTAGGGTTACCTGA+GGG | - | chr8.3:47876903-47876922 | None:intergenic | 35.0% | |
CAAGAAATAGGGAGAAAAGT+AGG | - | chr8.3:47878345-47878364 | None:intergenic | 35.0% | |
CTAACCCAACACAAAATTGA+TGG | - | chr8.3:47877552-47877571 | None:intergenic | 35.0% | |
CTATATGAATATAGGTCAGG+TGG | - | chr8.3:47879076-47879095 | None:intergenic | 35.0% | |
CTCAATATTACAAACTGCCA+TGG | + | chr8.3:47876824-47876843 | MS.gene007876:CDS | 35.0% | |
GAAAGTCGAATTCAGCATAT+TGG | + | chr8.3:47878226-47878245 | MS.gene007876:CDS | 35.0% | |
GATAAACCATATCATCACCA+TGG | - | chr8.3:47876844-47876863 | None:intergenic | 35.0% | |
GATAAATTCACTTTCACGCA+AGG | - | chr8.3:47878552-47878571 | None:intergenic | 35.0% | |
GCCTTGAAATAGATTCTGAT+GGG | + | chr8.3:47878432-47878451 | MS.gene007876:CDS | 35.0% | |
TAGAGGGAATCAAATTTGAG+AGG | - | chr8.3:47877138-47877157 | None:intergenic | 35.0% | |
TAGGAAGGAATGATAAGATG+TGG | - | chr8.3:47876517-47876536 | None:intergenic | 35.0% | |
TCAATACTTGTCTTTCTCTC+TGG | + | chr8.3:47878293-47878312 | MS.gene007876:CDS | 35.0% | |
TGCCTTGAAATAGATTCTGA+TGG | + | chr8.3:47878431-47878450 | MS.gene007876:CDS | 35.0% | |
TGGAGTAAAAACACCCATTT+GGG | + | chr8.3:47877074-47877093 | MS.gene007876:intron | 35.0% | |
TTGGAGTAAAAACACCCATT+TGG | + | chr8.3:47877073-47877092 | MS.gene007876:intron | 35.0% | |
TTGTACACGATAACAAGTGA+TGG | - | chr8.3:47878712-47878731 | None:intergenic | 35.0% | |
! | AATCCCCATCAATTTTGTGT+TGG | + | chr8.3:47877544-47877563 | MS.gene007876:intron | 35.0% |
! | ATCCCCATCAATTTTGTGTT+GGG | + | chr8.3:47877545-47877564 | MS.gene007876:intron | 35.0% |
! | CTGCAATGTTTTCAAAAGAC+AGG | - | chr8.3:47878140-47878159 | None:intergenic | 35.0% |
!! | AGACAAGTATTGAATCCGTA+AGG | - | chr8.3:47878286-47878305 | None:intergenic | 35.0% |
!! | TTAGGAACTGTTGTTGACTT+TGG | - | chr8.3:47879041-47879060 | None:intergenic | 35.0% |
!!! | AACCTTTTTTTGTAACAGCC+CGG | + | chr8.3:47877188-47877207 | MS.gene007876:intron | 35.0% |
AAAAACACTACTAGAGAGGG+GGG | + | chr8.3:47877424-47877443 | MS.gene007876:intron | 40.0% | |
AAAAACACTACTAGAGAGGG+GGG | - | chr8.3:47877443-47877424 | None:intergenic | 40.0% | |
AAACCCACATTTGGCATCAT+TGG | + | chr8.3:47878485-47878504 | MS.gene007876:CDS | 40.0% | |
AACTGTCACCTTCAAGAACA+TGG | + | chr8.3:47879012-47879031 | MS.gene007876:CDS | 40.0% | |
AATTTCAACCTCTTGGCAGA+AGG | - | chr8.3:47878386-47878405 | None:intergenic | 40.0% | |
ACTCATCCTATCGATGACAT+CGG | - | chr8.3:47876471-47876490 | None:intergenic | 40.0% | |
ACTGTCACCTTCAAGAACAT+GGG | + | chr8.3:47879013-47879032 | MS.gene007876:CDS | 40.0% | |
AGAGACAAATCTTGAAGGTG+GGG | - | chr8.3:47876806-47876825 | None:intergenic | 40.0% | |
AGGCAAAAACACTACTAGAG+AGG | + | chr8.3:47877420-47877439 | MS.gene007876:intron | 40.0% | |
AGGCAAAAACACTACTAGAG+AGG | - | chr8.3:47877439-47877420 | None:intergenic | 40.0% | |
AGGTGGGATTCAAGACATTT+AGG | - | chr8.3:47879059-47879078 | None:intergenic | 40.0% | |
ATTCCCTCTACTGCCAATTT+CGG | + | chr8.3:47877148-47877167 | MS.gene007876:intron | 40.0% | |
CAAAAACACTACTAGAGAGG+GGG | + | chr8.3:47877423-47877442 | MS.gene007876:intron | 40.0% | |
CAAAAACACTACTAGAGAGG+GGG | - | chr8.3:47877442-47877423 | None:intergenic | 40.0% | |
CAGAAGATTTGTGTTGAAGC+AGG | - | chr8.3:47878809-47878828 | None:intergenic | 40.0% | |
CATGAAATTAGGGTTACCTG+AGG | - | chr8.3:47876904-47876923 | None:intergenic | 40.0% | |
CTTGTGAGTAATAGTGAGAC+CGG | + | chr8.3:47877458-47877477 | MS.gene007876:intron | 40.0% | |
CTTGTGAGTAATAGTGAGAC+CGG | - | chr8.3:47877477-47877458 | None:intergenic | 40.0% | |
GACTACAAGAGAGTTGTGTT+TGG | + | chr8.3:47876996-47877015 | MS.gene007876:intron | 40.0% | |
GAGAGACAAATCTTGAAGGT+GGG | - | chr8.3:47876807-47876826 | None:intergenic | 40.0% | |
GAGATTGGTGCAATTCAAGA+GGG | - | chr8.3:47876876-47876895 | None:intergenic | 40.0% | |
GCAAAAACACTACTAGAGAG+GGG | + | chr8.3:47877422-47877441 | MS.gene007876:intron | 40.0% | |
GCAAAAACACTACTAGAGAG+GGG | - | chr8.3:47877441-47877422 | None:intergenic | 40.0% | |
GCCCATCAGAATCTATTTCA+AGG | - | chr8.3:47878436-47878455 | None:intergenic | 40.0% | |
GGAACACAACATTGACATTG+AGG | + | chr8.3:47878247-47878266 | MS.gene007876:CDS | 40.0% | |
GGAACTCTGGTCAAGAAATA+GGG | - | chr8.3:47878356-47878375 | None:intergenic | 40.0% | |
GGAATGATAAGATGTGGCAT+AGG | - | chr8.3:47876511-47876530 | None:intergenic | 40.0% | |
GGAGTAAAAACACCCATTTG+GGG | + | chr8.3:47877075-47877094 | MS.gene007876:intron | 40.0% | |
GGCAAAAACACTACTAGAGA+GGG | + | chr8.3:47877421-47877440 | MS.gene007876:intron | 40.0% | |
GGCAAAAACACTACTAGAGA+GGG | - | chr8.3:47877440-47877421 | None:intergenic | 40.0% | |
GTAAATCACCACCTAGATCT+CGG | - | chr8.3:47878595-47878614 | None:intergenic | 40.0% | |
TAAACTTGATATCCGGACCA+AGG | - | chr8.3:47877651-47877670 | None:intergenic | 40.0% | |
TCCGGGAAAACTGTAAACAT+CGG | - | chr8.3:47876747-47876766 | None:intergenic | 40.0% | |
TGAGAGACAAATCTTGAAGG+TGG | - | chr8.3:47876808-47876827 | None:intergenic | 40.0% | |
TGCAACATCAAACCCACATT+TGG | + | chr8.3:47878476-47878495 | MS.gene007876:CDS | 40.0% | |
TGCTTATAAATGTGACCGGA+GGG | + | chr8.3:47878063-47878082 | MS.gene007876:intron | 40.0% | |
TGCTTATAAATGTGACCGGA+GGG | - | chr8.3:47878082-47878063 | None:intergenic | 40.0% | |
TTCGAATGTGGCGAGATTTA+CGG | - | chr8.3:47876700-47876719 | None:intergenic | 40.0% | |
TTGAAGTAGTACTTATCCCC+AGG | + | chr8.3:47877375-47877394 | MS.gene007876:intron | 40.0% | |
TTGAAGTAGTACTTATCCCC+AGG | - | chr8.3:47877394-47877375 | None:intergenic | 40.0% | |
TTGCTTATAAATGTGACCGG+AGG | + | chr8.3:47878062-47878081 | MS.gene007876:intron | 40.0% | |
TTGCTTATAAATGTGACCGG+AGG | - | chr8.3:47878081-47878062 | None:intergenic | 40.0% | |
TTGTGAGTAATAGTGAGACC+GGG | + | chr8.3:47877459-47877478 | MS.gene007876:intron | 40.0% | |
TTGTGAGTAATAGTGAGACC+GGG | - | chr8.3:47877478-47877459 | None:intergenic | 40.0% | |
! | AAACTGCCATGGTGATGATA+TGG | + | chr8.3:47876835-47876854 | MS.gene007876:CDS | 40.0% |
! | ATAGAGAAGAGCACACTCAT+AGG | - | chr8.3:47877511-47877530 | None:intergenic | 40.0% |
! | CTACTAGCTCAATTGGTAGT+GGG | + | chr8.3:47877346-47877365 | MS.gene007876:intron | 40.0% |
! | CTAGTAGCTCAATTGGTAGT+GGG | - | chr8.3:47877333-47877352 | None:intergenic | 40.0% |
! | GGTATCTAGAGTTTCGAGTA+CGG | - | chr8.3:47878324-47878343 | None:intergenic | 40.0% |
! | GTATCTAGAGTTTCGAGTAC+GGG | - | chr8.3:47878323-47878342 | None:intergenic | 40.0% |
! | TAAAAACACCCATTTGGGGT+TGG | + | chr8.3:47877079-47877098 | MS.gene007876:intron | 40.0% |
! | TATCTAGAGTTTCGAGTACG+GGG | - | chr8.3:47878322-47878341 | None:intergenic | 40.0% |
! | TCCGATGTTTACAGTTTTCC+CGG | + | chr8.3:47876743-47876762 | MS.gene007876:CDS | 40.0% |
!! | AACTTTGCTCTGGCTTTGAT+TGG | + | chr8.3:47877581-47877600 | MS.gene007876:intron | 40.0% |
!! | GAAATAGATTCTGATGGGCT+TGG | + | chr8.3:47878437-47878456 | MS.gene007876:CDS | 40.0% |
!!! | ACCTTTTTTTGTAACAGCCC+GGG | + | chr8.3:47877189-47877208 | MS.gene007876:intron | 40.0% |
AATGTGGCGAGATTTACGGA+GGG | - | chr8.3:47876696-47876715 | None:intergenic | 45.0% | |
AGACGTTTAGATGCTCCCAA+AGG | - | chr8.3:47876589-47876608 | None:intergenic | 45.0% | |
AGCCAGAGCAAAGTTGTGTA+TGG | - | chr8.3:47877576-47877595 | None:intergenic | 45.0% | |
AGTACTTATCCCCAGGTACT+AGG | + | chr8.3:47877382-47877401 | MS.gene007876:intron | 45.0% | |
AGTACTTATCCCCAGGTACT+AGG | - | chr8.3:47877401-47877382 | None:intergenic | 45.0% | |
CACATGTAGACACATTCTCC+GGG | - | chr8.3:47876764-47876783 | None:intergenic | 45.0% | |
CCACATGTAGACACATTCTC+CGG | - | chr8.3:47876765-47876784 | None:intergenic | 45.0% | |
CGAGATTGGTGCAATTCAAG+AGG | - | chr8.3:47876877-47876896 | None:intergenic | 45.0% | |
CGGAGAATGTGTCTACATGT+GGG | + | chr8.3:47876763-47876782 | MS.gene007876:CDS | 45.0% | |
GCAAGGTTTGTAGAGTTCTC+AGG | + | chr8.3:47878881-47878900 | MS.gene007876:intron | 45.0% | |
GCTACTAGCTCAATTGGTAG+TGG | + | chr8.3:47877345-47877364 | MS.gene007876:intron | 45.0% | |
GCTAGTAGCTCAATTGGTAG+TGG | - | chr8.3:47877334-47877353 | None:intergenic | 45.0% | |
GCTTTGATTGGACCTAGTAG+TGG | + | chr8.3:47877593-47877612 | MS.gene007876:intron | 45.0% | |
GGATTTCGGCAAACACCTTA+CGG | + | chr8.3:47878268-47878287 | MS.gene007876:CDS | 45.0% | |
GGGAAAACTGTAAACATCGG+AGG | - | chr8.3:47876744-47876763 | None:intergenic | 45.0% | |
GGGAACTCTGGTCAAGAAAT+AGG | - | chr8.3:47878357-47878376 | None:intergenic | 45.0% | |
GTCCATACACAACTTTGCTC+TGG | + | chr8.3:47877571-47877590 | MS.gene007876:intron | 45.0% | |
TCGCCAATGATGCCAAATGT+GGG | - | chr8.3:47878491-47878510 | None:intergenic | 45.0% | |
TCTGCGTCATTCGACATCAA+AGG | + | chr8.3:47878622-47878641 | MS.gene007876:CDS | 45.0% | |
TGCAATTCAAGAGGGAAGGA+GGG | - | chr8.3:47876868-47876887 | None:intergenic | 45.0% | |
TTACCTGAGGGAAACGAGAT+TGG | - | chr8.3:47876891-47876910 | None:intergenic | 45.0% | |
TTGGTGCAATTCAAGAGGGA+AGG | - | chr8.3:47876872-47876891 | None:intergenic | 45.0% | |
! | AATGAGACTGGTCGTCATGA+CGG | - | chr8.3:47876549-47876568 | None:intergenic | 45.0% |
! | GATGGGCTTGGTATAGAGTA+CGG | + | chr8.3:47878449-47878468 | MS.gene007876:CDS | 45.0% |
! | TGATTGGACCTAGTAGTGGA+CGG | + | chr8.3:47877597-47877616 | MS.gene007876:intron | 45.0% |
! | TTTAGAATGGAGGTGCGAAG+CGG | - | chr8.3:47878742-47878761 | None:intergenic | 45.0% |
! | TTTGGCTCCCATGTTCTTGA+AGG | - | chr8.3:47879023-47879042 | None:intergenic | 45.0% |
!! | GTTGAGTTGGTCTGCAGATT+AGG | + | chr8.3:47877619-47877638 | MS.gene007876:intron | 45.0% |
!! | TTGTGTGGCTTGTTGCTTCT+AGG | + | chr8.3:47878986-47879005 | MS.gene007876:intron | 45.0% |
!!! | CCTTTTTTTGTAACAGCCCG+GGG | + | chr8.3:47877190-47877209 | MS.gene007876:intron | 45.0% |
AACTACCTCCGAGATCTAGG+TGG | + | chr8.3:47878584-47878603 | MS.gene007876:CDS | 50.0% | |
AATCACCACCTAGATCTCGG+AGG | - | chr8.3:47878592-47878611 | None:intergenic | 50.0% | |
ACAACGCCGATGTCATCGAT+AGG | + | chr8.3:47876462-47876481 | MS.gene007876:CDS | 50.0% | |
AGGTCCCAAATGTAACAGCC+CGG | - | chr8.3:47877491-47877510 | None:intergenic | 50.0% | |
ATCTTGAAGGTGGGGTCCAA+TGG | - | chr8.3:47876798-47876817 | None:intergenic | 50.0% | |
ATGGACTTGCCCACCGAAAT+TGG | - | chr8.3:47877164-47877183 | None:intergenic | 50.0% | |
ATGTGGCATAGGAGTGAGTC+TGG | - | chr8.3:47876500-47876519 | None:intergenic | 50.0% | |
ATTAGGTGTGGTCCTTGGTC+CGG | + | chr8.3:47877636-47877655 | MS.gene007876:intron | 50.0% | |
CAACTCAACCGTCCACTACT+AGG | - | chr8.3:47877608-47877627 | None:intergenic | 50.0% | |
CCACCGAAATTGGCAGTAGA+GGG | - | chr8.3:47877154-47877173 | None:intergenic | 50.0% | |
CCCCGGGCTGTTACAAAAAA+AGG | - | chr8.3:47877193-47877212 | None:intergenic | 50.0% | |
CCGGAGAATGTGTCTACATG+TGG | + | chr8.3:47876762-47876781 | MS.gene007876:CDS | 50.0% | |
CCTCTACTGCCAATTTCGGT+GGG | + | chr8.3:47877152-47877171 | MS.gene007876:intron | 50.0% | |
CGTTTAGATGCTCCCAAAGG+TGG | - | chr8.3:47876586-47876605 | None:intergenic | 50.0% | |
CTCAACTACCTCCGAGATCT+AGG | + | chr8.3:47878581-47878600 | MS.gene007876:CDS | 50.0% | |
CTCGGAGGTAGTTGAGCATA+GGG | - | chr8.3:47878577-47878596 | None:intergenic | 50.0% | |
GAATGTGGCGAGATTTACGG+AGG | - | chr8.3:47876697-47876716 | None:intergenic | 50.0% | |
GAGTAATAGTGAGACCGGGT+GGG | + | chr8.3:47877463-47877482 | MS.gene007876:intron | 50.0% | |
GAGTAATAGTGAGACCGGGT+GGG | - | chr8.3:47877482-47877463 | None:intergenic | 50.0% | |
GGAATCGAACCTAGTACCTG+GGG | + | chr8.3:47877285-47877304 | MS.gene007876:intron | 50.0% | |
GGAATCGAACCTAGTACCTG+GGG | - | chr8.3:47877304-47877285 | None:intergenic | 50.0% | |
GGGAATCGAACCTAGTACCT+GGG | + | chr8.3:47877284-47877303 | MS.gene007876:intron | 50.0% | |
GGGAATCGAACCTAGTACCT+GGG | - | chr8.3:47877303-47877284 | None:intergenic | 50.0% | |
GGTACTAGGTTCGATTCCCA+CGG | + | chr8.3:47877396-47877415 | MS.gene007876:intron | 50.0% | |
GGTACTAGGTTCGATTCCCA+CGG | - | chr8.3:47877415-47877396 | None:intergenic | 50.0% | |
GTACTAGGTTCGATTCCCAC+GGG | + | chr8.3:47877397-47877416 | MS.gene007876:intron | 50.0% | |
GTACTAGGTTCGATTCCCAC+GGG | - | chr8.3:47877416-47877397 | None:intergenic | 50.0% | |
GTCGCCAATGATGCCAAATG+TGG | - | chr8.3:47878492-47878511 | None:intergenic | 50.0% | |
GTGCAATTCAAGAGGGAAGG+AGG | - | chr8.3:47876869-47876888 | None:intergenic | 50.0% | |
TCTCGGAGGTAGTTGAGCAT+AGG | - | chr8.3:47878578-47878597 | None:intergenic | 50.0% | |
TGAGTAATAGTGAGACCGGG+TGG | + | chr8.3:47877462-47877481 | MS.gene007876:intron | 50.0% | |
TGAGTAATAGTGAGACCGGG+TGG | - | chr8.3:47877481-47877462 | None:intergenic | 50.0% | |
TGCAGATTAGGTGTGGTCCT+TGG | + | chr8.3:47877631-47877650 | MS.gene007876:intron | 50.0% | |
TGGGAATCGAACCTAGTACC+TGG | + | chr8.3:47877283-47877302 | MS.gene007876:intron | 50.0% | |
TGGGAATCGAACCTAGTACC+TGG | - | chr8.3:47877302-47877283 | None:intergenic | 50.0% | |
TTCAACCTCTTGGCAGAAGG+TGG | - | chr8.3:47878383-47878402 | None:intergenic | 50.0% | |
! | GTTGGTCTGCAGATTAGGTG+TGG | + | chr8.3:47877624-47877643 | MS.gene007876:intron | 50.0% |
!! | AGTAGTGTTTTTGCCTCCCG+TGG | + | chr8.3:47877263-47877282 | MS.gene007876:intron | 50.0% |
!! | AGTAGTGTTTTTGCCTCCCG+TGG | - | chr8.3:47877282-47877263 | None:intergenic | 50.0% |
!! | CTAGTAGTGGACGGTTGAGT+TGG | + | chr8.3:47877606-47877625 | MS.gene007876:intron | 50.0% |
!! | GTAGTGTTTTTGCCTCCCGT+GGG | + | chr8.3:47877264-47877283 | MS.gene007876:intron | 50.0% |
!! | GTAGTGTTTTTGCCTCCCGT+GGG | - | chr8.3:47877283-47877264 | None:intergenic | 50.0% |
!! | GTCATGACGGAGGTTTTGGT+AGG | - | chr8.3:47876536-47876555 | None:intergenic | 50.0% |
!! | GTTGGACTGGTGGTTGGTTT+GGG | + | chr8.3:47877097-47877116 | MS.gene007876:intron | 50.0% |
!! | TGACGGAGGTTTTGGTAGGA+AGG | - | chr8.3:47876532-47876551 | None:intergenic | 50.0% |
!! | TGGTGGTTGGTTTGGGATGT+TGG | + | chr8.3:47877104-47877123 | MS.gene007876:intron | 50.0% |
ACCACCAGTCCAACCCCAAA+TGG | - | chr8.3:47877091-47877110 | None:intergenic | 55.0% | |
ACGAGTCCAACTGCAACTGC+AGG | + | chr8.3:47876621-47876640 | MS.gene007876:CDS | 55.0% | |
AGAAGGTGGAACGGGAACTC+TGG | - | chr8.3:47878369-47878388 | None:intergenic | 55.0% | |
CATTGGCGACTTGCAGAGCA+TGG | + | chr8.3:47878502-47878521 | MS.gene007876:CDS | 55.0% | |
CCACCAGTCCAACCCCAAAT+GGG | - | chr8.3:47877090-47877109 | None:intergenic | 55.0% | |
CCCACCGAAATTGGCAGTAG+AGG | - | chr8.3:47877155-47877174 | None:intergenic | 55.0% | |
CCCTCTACTGCCAATTTCGG+TGG | + | chr8.3:47877151-47877170 | MS.gene007876:intron | 55.0% | |
CCTCTTGGCAGAAGGTGGAA+CGG | - | chr8.3:47878378-47878397 | None:intergenic | 55.0% | |
CGACCAGTCTCATTTCTCGC+CGG | + | chr8.3:47876555-47876574 | MS.gene007876:CDS | 55.0% | |
CTCTTGGCAGAAGGTGGAAC+GGG | - | chr8.3:47878377-47878396 | None:intergenic | 55.0% | |
GCACCAATCTCGTTTCCCTC+AGG | + | chr8.3:47876885-47876904 | MS.gene007876:CDS | 55.0% | |
GGGATTCCTGCAGTTGCAGT+TGG | - | chr8.3:47876630-47876649 | None:intergenic | 55.0% | |
GGTCCCAAATGTAACAGCCC+GGG | - | chr8.3:47877490-47877509 | None:intergenic | 55.0% | |
GTCCCAAATGTAACAGCCCG+GGG | - | chr8.3:47877489-47877508 | None:intergenic | 55.0% | |
! | ACACCCATTTGGGGTTGGAC+TGG | + | chr8.3:47877084-47877103 | MS.gene007876:intron | 55.0% |
! | GGGCTTGGTATAGAGTACGG+TGG | + | chr8.3:47878452-47878471 | MS.gene007876:CDS | 55.0% |
! | GTAAACATCGGAGGTGCAGC+AGG | - | chr8.3:47876735-47876754 | None:intergenic | 55.0% |
!! | GGTCGTCATGACGGAGGTTT+TGG | - | chr8.3:47876540-47876559 | None:intergenic | 55.0% |
!! | GGTTGGACTGGTGGTTGGTT+TGG | + | chr8.3:47877096-47877115 | MS.gene007876:intron | 55.0% |
!! | TTTGGGGTTGGACTGGTGGT+TGG | + | chr8.3:47877091-47877110 | MS.gene007876:intron | 55.0% |
ATGTGGGTCCGTGCTGCCAT+TGG | + | chr8.3:47876779-47876798 | MS.gene007876:CDS | 60.0% | |
CCACCGGCGAGAAATGAGAC+TGG | - | chr8.3:47876561-47876580 | None:intergenic | 60.0% | |
CCAGTCTCATTTCTCGCCGG+TGG | + | chr8.3:47876558-47876577 | MS.gene007876:CDS | 60.0% | |
CCGTTCCACCTTCTGCCAAG+AGG | + | chr8.3:47878375-47878394 | MS.gene007876:CDS | 60.0% | |
CTAGGTTCGATTCCCACGGG+AGG | + | chr8.3:47877400-47877419 | MS.gene007876:intron | 60.0% | |
CTAGGTTCGATTCCCACGGG+AGG | - | chr8.3:47877419-47877400 | None:intergenic | 60.0% | |
GGCCCCGGGCTGTTACATTT+GGG | + | chr8.3:47877484-47877503 | MS.gene007876:intron | 60.0% | |
TGGCATGTGACAGAGCCCCT+TGG | - | chr8.3:47879245-47879264 | None:intergenic | 60.0% | |
TGGCGACTTGCAGAGCATGG+AGG | + | chr8.3:47878505-47878524 | MS.gene007876:CDS | 60.0% | |
! | CCCATTTGGGGTTGGACTGG+TGG | + | chr8.3:47877087-47877106 | MS.gene007876:intron | 60.0% |
! | GAGACTGGTCGTCATGACGG+AGG | - | chr8.3:47876546-47876565 | None:intergenic | 60.0% |
GGGCCCCGGGCTGTTACATT+TGG | + | chr8.3:47877483-47877502 | MS.gene007876:intron | 65.0% | |
GGTGGGGTCCAATGGCAGCA+CGG | - | chr8.3:47876790-47876809 | None:intergenic | 65.0% | |
GCTCCCAAAGGTGGCGCCAC+CGG | - | chr8.3:47876577-47876596 | None:intergenic | 70.0% | |
TAGTGAGACCGGGTGGGCCC+CGG | + | chr8.3:47877469-47877488 | MS.gene007876:intron | 70.0% | |
TAGTGAGACCGGGTGGGCCC+CGG | - | chr8.3:47877488-47877469 | None:intergenic | 70.0% | |
TCGCCGGTGGCGCCACCTTT+GGG | + | chr8.3:47876571-47876590 | MS.gene007876:CDS | 70.0% | |
AGTGAGACCGGGTGGGCCCC+GGG | + | chr8.3:47877470-47877489 | MS.gene007876:intron | 75.0% | |
AGTGAGACCGGGTGGGCCCC+GGG | - | chr8.3:47877489-47877470 | None:intergenic | 75.0% | |
CTCGCCGGTGGCGCCACCTT+TGG | + | chr8.3:47876570-47876589 | MS.gene007876:CDS | 75.0% | |
GTAACAGCCCGGGGCCCACC+CGG | + | chr8.3:47877199-47877218 | MS.gene007876:intron | 75.0% | |
GTAACAGCCCGGGGCCCACC+CGG | - | chr8.3:47877218-47877199 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 47876440 | 47879280 | 47876440 | ID=MS.gene007876 |
chr8.3 | mRNA | 47876440 | 47879280 | 47876440 | ID=MS.gene007876.t1;Parent=MS.gene007876 |
chr8.3 | exon | 47876440 | 47876906 | 47876440 | ID=MS.gene007876.t1.exon1;Parent=MS.gene007876.t1 |
chr8.3 | CDS | 47876440 | 47876906 | 47876440 | ID=cds.MS.gene007876.t1;Parent=MS.gene007876.t1 |
chr8.3 | exon | 47878160 | 47878643 | 47878160 | ID=MS.gene007876.t1.exon2;Parent=MS.gene007876.t1 |
chr8.3 | CDS | 47878160 | 47878643 | 47878160 | ID=cds.MS.gene007876.t1;Parent=MS.gene007876.t1 |
chr8.3 | exon | 47878736 | 47878885 | 47878736 | ID=MS.gene007876.t1.exon3;Parent=MS.gene007876.t1 |
chr8.3 | CDS | 47878736 | 47878885 | 47878736 | ID=cds.MS.gene007876.t1;Parent=MS.gene007876.t1 |
chr8.3 | exon | 47879008 | 47879280 | 47879008 | ID=MS.gene007876.t1.exon4;Parent=MS.gene007876.t1 |
chr8.3 | CDS | 47879008 | 47879280 | 47879008 | ID=cds.MS.gene007876.t1;Parent=MS.gene007876.t1 |
Gene Sequence |
Protein sequence |