AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene66626


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene66626.t1 MTR_4g050250 93.333 420 28 0 1 420 1 420 0.0 807
MS.gene66626.t1 MTR_8g058965 68.230 469 137 5 11 478 3 460 0.0 612
MS.gene66626.t1 MTR_8g469020 66.234 462 143 7 20 479 6 456 0.0 588
MS.gene66626.t1 MTR_8g070950 54.564 493 151 14 4 479 3 439 6.11e-157 452
MS.gene66626.t1 MTR_8g062010 54.292 466 171 10 18 478 6 434 1.04e-155 449
MS.gene66626.t1 MTR_8g062310 51.860 484 177 11 1 479 1 433 2.13e-150 436
MS.gene66626.t1 MTR_8g062080 51.619 494 178 13 1 478 1 449 2.42e-150 436
MS.gene66626.t1 MTR_8g062300 48.356 517 186 16 1 478 7 481 1.80e-132 392
MS.gene66626.t1 MTR_2g083840 44.515 474 229 9 8 474 11 457 6.90e-110 333
MS.gene66626.t1 MTR_8g467790 49.754 406 136 16 21 418 148 493 4.73e-108 330
MS.gene66626.t1 MTR_8g468810 43.711 485 232 14 6 474 4 463 1.46e-105 322
MS.gene66626.t1 MTR_8g058970 43.086 499 233 14 4 474 2 477 1.91e-102 315
MS.gene66626.t1 MTR_8g062270 41.631 466 235 12 19 473 14 453 1.07e-92 289
MS.gene66626.t1 MTR_4g032730 39.308 491 242 12 12 473 3 466 7.79e-89 279
MS.gene66626.t1 MTR_8g467800 42.159 491 235 17 5 479 1 458 5.35e-84 266
MS.gene66626.t1 MTR_8g468760 40.466 472 216 14 12 473 2 418 6.47e-83 262
MS.gene66626.t1 MTR_5g092960 39.323 473 255 10 12 473 10 461 2.08e-82 263
MS.gene66626.t1 MTR_8g014260 39.876 484 243 21 4 474 3 451 1.08e-81 260
MS.gene66626.t1 MTR_8g468840 41.228 456 243 11 21 472 14 448 2.09e-80 257
MS.gene66626.t1 MTR_8g468810 43.734 391 184 11 6 383 4 371 8.45e-79 250
MS.gene66626.t1 MTR_8g445780 40.662 423 210 15 11 427 3 390 6.27e-72 233
MS.gene66626.t1 MTR_8g468810 44.118 340 161 8 6 338 4 321 4.38e-71 229
MS.gene66626.t1 MTR_8g468810 44.048 336 159 8 6 334 4 317 9.88e-70 225
MS.gene66626.t1 MTR_8g468810 43.188 345 167 8 6 343 4 326 1.68e-69 226
MS.gene66626.t1 MTR_8g014160 34.968 469 206 14 21 474 41 425 1.75e-62 209
MS.gene66626.t1 MTR_5g092960 39.200 375 202 8 12 378 10 366 4.59e-58 197
MS.gene66626.t1 MTR_2g086020 65.190 158 54 1 322 479 164 320 3.90e-57 192
MS.gene66626.t1 MTR_2g086020 47.134 157 61 5 47 196 1 142 3.49e-31 122
MS.gene66626.t1 MTR_8g467800 42.560 336 160 13 5 333 1 310 4.00e-46 164
MS.gene66626.t1 MTR_4g024710 38.365 318 158 12 167 474 58 347 6.77e-44 158
MS.gene66626.t1 MTR_8g014210 40.083 242 132 8 235 474 1 231 4.66e-35 130
MS.gene66626.t1 MTR_1g041245 31.317 463 224 21 20 474 10 386 1.04e-34 134
MS.gene66626.t1 MTR_8g077460 40.562 249 126 8 14 257 3 234 4.48e-34 132
MS.gene66626.t1 MTR_8g077460 47.945 146 71 4 330 474 234 375 1.53e-32 127
MS.gene66626.t1 MTR_5g021550 47.929 169 72 7 5 166 3 162 5.61e-33 123
MS.gene66626.t1 MTR_5g084070 29.828 466 273 16 7 466 2 419 9.36e-33 129
MS.gene66626.t1 MTR_4g024745 37.374 297 160 11 165 457 10 284 2.92e-32 125
MS.gene66626.t1 MTR_5g080710 29.718 461 264 18 20 466 32 446 2.28e-30 123
MS.gene66626.t1 MTR_7g098510 28.601 486 233 16 6 474 3 391 3.03e-29 119
MS.gene66626.t1 MTR_8g014290 42.331 163 80 5 14 167 3 160 4.76e-29 112
MS.gene66626.t1 MTR_7g033915 26.866 469 216 17 19 473 9 364 1.80e-24 104
MS.gene66626.t1 MTR_3g099800 57.471 87 36 1 386 471 19 105 5.62e-24 96.7
MS.gene66626.t1 MTR_4g024720 39.674 184 86 6 4 169 3 179 1.66e-22 95.9
MS.gene66626.t1 MTR_3g023630 28.694 467 225 22 18 474 5 373 3.12e-22 98.6
MS.gene66626.t1 MTR_5g008920 25.435 460 250 16 21 474 9 381 4.98e-22 98.2
MS.gene66626.t1 MTR_7g115270 32.000 225 122 8 13 230 4 204 2.65e-21 96.3
MS.gene66626.t1 MTR_7g115270 33.333 138 86 3 338 471 264 399 2.31e-13 72.0
MS.gene66626.t1 MTR_1g108820 26.522 460 255 18 16 471 3 383 1.34e-20 94.0
MS.gene66626.t1 MTR_3g071850 25.895 475 262 17 3 466 6 401 7.77e-20 93.2
MS.gene66626.t1 MTR_3g108560 25.108 462 244 14 21 473 20 388 8.00e-20 91.7
MS.gene66626.t1 MTR_7g056447 33.495 206 108 7 21 225 9 186 1.37e-19 89.4
MS.gene66626.t1 MTR_5g073420 33.333 216 117 10 16 228 6 197 2.91e-19 89.7
MS.gene66626.t1 MTR_4g098590 26.267 434 225 19 23 441 1 354 3.04e-19 89.7
MS.gene66626.t1 MTR_1g038710 27.854 438 272 16 21 442 19 428 3.46e-18 87.4
MS.gene66626.t1 MTR_3g109982 27.255 499 269 20 21 467 13 469 1.20e-17 86.7
MS.gene66626.t1 MTR_7g032380 32.701 211 111 9 21 228 11 193 1.38e-17 84.3
MS.gene66626.t1 MTR_7g032380 35.075 134 81 2 346 474 224 356 1.73e-13 72.0
MS.gene66626.t1 MTR_2g008320 26.096 479 242 19 13 474 44 427 5.52e-17 83.6
MS.gene66626.t1 MTR_7g034110 32.906 234 125 9 19 249 9 213 9.31e-17 82.0
MS.gene66626.t1 MTR_5g058100 31.674 221 118 7 14 230 2 193 1.01e-16 82.4
MS.gene66626.t1 MTR_7g056433 34.450 209 110 8 21 227 12 195 1.25e-16 82.0
MS.gene66626.t1 MTR_7g056433 31.159 138 87 4 342 474 255 389 8.08e-11 64.3
MS.gene66626.t1 MTR_3g105060 24.946 461 240 19 20 474 13 373 1.60e-16 81.6
MS.gene66626.t1 MTR_4g056030 35.211 213 105 9 21 227 9 194 1.83e-16 82.0
MS.gene66626.t1 MTR_8g085430 31.111 225 117 9 14 228 4 200 2.17e-16 80.5
MS.gene66626.t1 MTR_5g008950 30.045 223 120 9 23 242 1 190 2.19e-16 81.3
MS.gene66626.t1 MTR_5g008950 28.502 207 117 7 288 474 170 365 8.00e-13 70.1
MS.gene66626.t1 MTR_3g107160 24.353 464 251 18 21 474 10 383 2.90e-16 80.9
MS.gene66626.t1 MTR_4g056040 26.316 475 256 21 21 442 9 442 4.10e-16 81.3
MS.gene66626.t1 MTR_7g026500 29.787 235 136 8 19 247 12 223 9.02e-16 79.3
MS.gene66626.t1 MTR_8g014230 45.783 83 42 3 382 464 16 95 1.33e-15 72.8
MS.gene66626.t1 MTR_4g080787 24.704 506 311 20 1 476 1 466 1.35e-15 79.3
MS.gene66626.t1 MTR_2g008310 25.000 460 249 17 21 474 2 371 3.09e-15 77.8
MS.gene66626.t1 MTR_3g087260 26.800 500 264 19 21 473 12 456 5.63e-15 77.4
MS.gene66626.t1 MTR_3g108150 33.493 209 107 10 21 228 13 190 6.18e-15 76.6
MS.gene66626.t1 MTR_2g007500 30.531 226 109 9 10 228 3 187 1.11e-14 75.5
MS.gene66626.t1 MTR_7g032370 35.036 137 82 2 344 474 217 352 1.98e-14 75.1
MS.gene66626.t1 MTR_3g107120 25.751 466 253 16 21 475 9 392 2.15e-14 75.1
MS.gene66626.t1 MTR_6g022390 33.600 125 79 3 21 143 5 127 3.13e-14 70.5
MS.gene66626.t1 MTR_4g134150 30.932 236 111 10 21 246 14 207 3.97e-14 72.0
MS.gene66626.t1 MTR_6g045333 27.391 230 142 7 3 230 43 249 5.05e-14 74.3
MS.gene66626.t1 MTR_3g107100 30.476 210 120 7 21 229 11 195 7.25e-14 73.6
MS.gene66626.t1 MTR_7g056420 33.557 149 80 5 21 168 9 139 7.39e-14 74.7
MS.gene66626.t1 MTR_7g056430 33.557 149 80 5 21 168 9 139 7.57e-14 74.7
MS.gene66626.t1 MTR_2g072720 25.751 466 281 19 8 452 32 453 1.72e-13 72.8
MS.gene66626.t1 MTR_5g045510 33.803 213 107 12 20 228 11 193 2.37e-13 72.0
MS.gene66626.t1 MTR_7g055943 29.358 218 124 8 17 232 36 225 2.71e-13 72.0
MS.gene66626.t1 MTR_7g033945 33.149 181 101 7 19 194 9 174 2.77e-13 68.6
MS.gene66626.t1 MTR_6g022500 30.876 217 120 7 12 226 94 282 2.95e-13 72.0
MS.gene66626.t1 MTR_5g061680 32.420 219 121 10 13 229 3 196 3.33e-13 70.9
MS.gene66626.t1 MTR_7g088260 30.045 223 122 10 9 228 79 270 7.43e-13 70.9
MS.gene66626.t1 MTR_7g098480 29.386 228 125 7 6 228 3 199 8.36e-13 70.9
MS.gene66626.t1 MTR_2g007450 31.915 235 123 10 8 226 3 216 9.92e-13 70.1
MS.gene66626.t1 MTR_4g024770 51.471 68 29 2 3 70 9 72 1.30e-12 63.5
MS.gene66626.t1 MTR_1g108820 29.858 211 119 8 16 226 3 184 1.61e-12 68.9
MS.gene66626.t1 MTR_7g098570 29.703 202 119 6 285 470 195 389 2.07e-12 69.3
MS.gene66626.t1 MTR_6g011460 30.568 229 129 8 15 239 38 240 2.18e-12 69.3
MS.gene66626.t1 MTR_5g013500 24.681 470 225 19 21 474 9 365 2.31e-12 68.6
MS.gene66626.t1 MTR_5g058000 29.767 215 121 7 16 228 3 189 2.91e-12 68.6
MS.gene66626.t1 MTR_7g034115 31.579 209 114 8 20 226 10 191 4.49e-12 67.8
MS.gene66626.t1 MTR_7g034115 37.226 137 76 4 337 466 242 375 1.35e-11 66.6
MS.gene66626.t1 MTR_3g115430 42.667 75 40 1 400 474 54 125 7.11e-12 63.2
MS.gene66626.t1 MTR_4g080773 24.138 464 283 18 1 433 1 426 7.17e-12 67.8
MS.gene66626.t1 MTR_4g080773 24.138 464 283 18 1 433 1 426 8.37e-12 67.8
MS.gene66626.t1 MTR_7g033990 29.108 213 117 7 21 227 11 195 8.53e-12 67.4
MS.gene66626.t1 MTR_7g056287 34.307 137 75 4 344 473 243 371 1.33e-11 66.6
MS.gene66626.t1 MTR_7g021630 25.249 301 176 9 9 299 5 266 1.69e-11 66.2
MS.gene66626.t1 MTR_5g045170 29.717 212 117 9 23 230 16 199 1.84e-11 66.2
MS.gene66626.t1 MTR_6g040270 33.491 212 106 11 23 229 10 191 1.99e-11 65.9
MS.gene66626.t1 MTR_7g021630 25.249 301 176 9 9 299 5 266 2.42e-11 65.5
MS.gene66626.t1 MTR_0009s0080 29.614 233 131 9 1 230 2 204 2.66e-11 65.9
MS.gene66626.t1 MTR_8g066650 30.653 199 105 7 8 201 67 237 4.07e-11 65.5
MS.gene66626.t1 MTR_7g056277 33.577 137 76 4 344 473 499 627 4.47e-11 65.5
MS.gene66626.t1 MTR_5g008910 36.047 86 51 1 393 478 225 306 9.02e-11 63.2
MS.gene66626.t1 MTR_3g036250 26.636 214 124 7 20 228 4 189 9.84e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene66626.t1 AT5G56420 30.303 462 269 17 21 474 6 422 5.71e-28 115
MS.gene66626.t1 AT5G56420 30.303 462 269 17 21 474 6 422 5.71e-28 115
MS.gene66626.t1 AT5G56420 30.303 462 269 17 21 474 6 422 5.71e-28 115
MS.gene66626.t1 AT4G10400 28.448 464 264 18 21 473 2 408 6.87e-27 112
MS.gene66626.t1 AT4G10400 28.448 464 264 18 21 473 2 408 6.87e-27 112
MS.gene66626.t1 AT4G10400 28.448 464 264 18 21 473 2 408 6.87e-27 112
MS.gene66626.t1 AT4G26340 28.025 471 269 17 21 474 2 419 1.46e-25 108
MS.gene66626.t1 AT1G69630 26.721 494 279 19 11 471 5 448 2.02e-24 105
MS.gene66626.t1 AT1G78750 26.923 468 297 15 20 471 17 455 1.15e-23 103
MS.gene66626.t1 AT1G78750 26.923 468 297 15 20 471 17 455 1.15e-23 103
MS.gene66626.t1 AT1G16930 25.662 491 289 19 11 474 8 449 1.54e-22 100
MS.gene66626.t1 AT1G16930 25.662 491 289 19 11 474 8 449 1.54e-22 100
MS.gene66626.t1 AT1G16930 25.662 491 289 19 11 474 8 449 1.54e-22 100
MS.gene66626.t1 AT1G32375 28.632 475 264 21 21 474 2 422 3.35e-22 99.0
MS.gene66626.t1 AT1G32375 28.632 475 264 21 21 474 2 422 3.35e-22 99.0
MS.gene66626.t1 AT3G42770 27.912 455 279 18 23 466 1 417 1.64e-21 97.8
MS.gene66626.t1 AT1G13780 25.690 471 306 15 19 471 8 452 9.90e-21 95.1
MS.gene66626.t1 AT2G26030 24.274 482 287 15 21 471 4 438 1.26e-20 94.7
MS.gene66626.t1 AT2G26030 24.274 482 287 15 21 471 4 438 1.26e-20 94.7
MS.gene66626.t1 AT3G50710 26.151 478 277 18 21 474 2 427 2.29e-19 90.5
MS.gene66626.t1 AT5G53840 25.910 467 303 17 15 475 12 441 2.53e-19 90.5
MS.gene66626.t1 AT2G26030 23.651 482 295 14 21 471 4 443 3.65e-19 90.1
MS.gene66626.t1 AT3G59200 32.381 210 115 8 21 226 7 193 5.28e-19 89.0
MS.gene66626.t1 AT1G06630 27.419 372 239 11 18 383 9 355 6.36e-19 88.6
MS.gene66626.t1 AT1G06630 27.419 372 239 11 18 383 9 355 6.36e-19 88.6
MS.gene66626.t1 AT5G18780 27.459 488 267 18 16 471 6 438 1.53e-18 88.2
MS.gene66626.t1 AT5G18780 27.459 488 267 18 16 471 6 438 1.53e-18 88.2
MS.gene66626.t1 AT3G59200 32.381 210 115 8 21 226 7 193 2.08e-18 88.2
MS.gene66626.t1 AT5G56560 27.489 462 277 19 22 474 6 418 8.93e-18 85.9
MS.gene66626.t1 AT2G26860 28.337 427 252 13 21 433 2 388 1.37e-17 85.1
MS.gene66626.t1 AT2G26860 28.337 427 252 13 21 433 2 388 1.37e-17 85.1
MS.gene66626.t1 AT5G22660 25.761 493 268 22 18 471 10 443 2.49e-17 84.7
MS.gene66626.t1 AT1G06630 27.100 369 238 11 18 380 9 352 3.74e-17 83.6
MS.gene66626.t1 AT1G06630 27.100 369 238 11 18 380 9 352 3.74e-17 83.6
MS.gene66626.t1 AT1G06630 27.100 369 238 11 18 380 9 352 3.74e-17 83.6
MS.gene66626.t1 AT1G06630 27.100 369 238 11 18 380 9 352 3.74e-17 83.6
MS.gene66626.t1 AT1G06630 27.100 369 238 11 18 380 18 361 3.97e-17 83.6
MS.gene66626.t1 AT4G09920 32.524 206 114 7 21 226 2 182 4.38e-17 82.4
MS.gene66626.t1 AT4G09920 32.524 206 114 7 21 226 2 182 4.38e-17 82.4
MS.gene66626.t1 AT1G06630 27.100 369 238 11 18 380 9 352 4.47e-17 84.0
MS.gene66626.t1 AT4G09920 32.524 206 114 7 21 226 2 182 4.96e-17 82.0
MS.gene66626.t1 AT4G09920 32.524 206 114 7 21 226 2 182 4.96e-17 82.0
MS.gene66626.t1 AT4G09920 32.524 206 114 7 21 226 2 182 4.96e-17 82.0
MS.gene66626.t1 AT3G26922 29.880 251 135 11 9 251 2 219 5.08e-17 82.0
MS.gene66626.t1 AT3G26922 29.880 251 135 11 9 251 2 219 5.08e-17 82.0
MS.gene66626.t1 AT5G56370 25.053 475 278 18 21 473 2 420 6.49e-17 83.2
MS.gene66626.t1 AT5G56370 25.053 475 278 18 21 473 2 420 6.49e-17 83.2
MS.gene66626.t1 AT1G66290 26.380 489 275 27 12 471 18 450 7.12e-17 83.2
MS.gene66626.t1 AT1G66310 25.911 494 276 22 8 471 6 439 1.62e-16 82.0
MS.gene66626.t1 AT5G56400 24.848 495 287 18 7 474 19 455 1.87e-16 82.0
MS.gene66626.t1 AT3G52680 28.059 474 274 18 19 473 19 444 4.48e-16 80.9
MS.gene66626.t1 AT5G18780 28.877 374 215 14 16 362 6 355 4.68e-16 80.1
MS.gene66626.t1 AT5G18780 28.877 374 215 14 16 362 6 355 4.68e-16 80.1
MS.gene66626.t1 AT3G60040 29.787 235 143 8 21 247 13 233 9.22e-16 80.5
MS.gene66626.t1 AT3G60040 29.787 235 143 8 21 247 232 452 1.69e-15 79.7
MS.gene66626.t1 AT5G22720 23.926 489 301 17 15 473 17 464 1.72e-15 79.0
MS.gene66626.t1 AT4G00160 28.571 497 252 25 19 476 14 446 1.75e-15 79.0
MS.gene66626.t1 AT3G60040 29.787 235 143 8 21 247 230 450 1.77e-15 79.7
MS.gene66626.t1 AT4G13985 24.385 488 304 16 10 471 8 456 2.88e-15 78.2
MS.gene66626.t1 AT4G14096 26.369 493 297 22 17 478 4 461 4.69e-15 77.8
MS.gene66626.t1 AT4G14096 26.369 493 297 22 17 478 4 461 4.69e-15 77.8
MS.gene66626.t1 AT3G59230 26.441 503 294 23 16 475 7 476 6.08e-15 77.4
MS.gene66626.t1 AT5G27750 24.949 493 295 21 19 474 3 457 7.56e-15 77.0
MS.gene66626.t1 AT1G06630 30.476 210 129 7 18 226 9 202 7.74e-15 75.5
MS.gene66626.t1 AT4G14103 29.568 301 162 13 17 303 4 268 9.15e-15 76.6
MS.gene66626.t1 AT5G44950 25.000 468 295 18 19 467 2 432 9.63e-15 76.6
MS.gene66626.t1 AT4G14103 29.431 299 163 12 18 303 5 268 9.71e-15 76.3
MS.gene66626.t1 AT4G14103 29.431 299 163 12 18 303 5 268 9.71e-15 76.3
MS.gene66626.t1 AT5G62970 25.738 474 289 18 28 473 10 448 1.46e-14 76.3
MS.gene66626.t1 AT5G41840 29.412 255 134 13 17 249 10 240 1.88e-14 76.3
MS.gene66626.t1 AT5G60610 23.516 438 259 14 21 438 2 383 2.46e-14 75.1
MS.gene66626.t1 AT5G60610 23.516 438 259 14 21 438 2 383 2.46e-14 75.1
MS.gene66626.t1 AT5G50270 26.742 445 250 19 21 441 2 394 4.51e-14 74.3
MS.gene66626.t1 AT1G55030 26.244 442 253 18 8 432 5 390 6.44e-14 73.9
MS.gene66626.t1 AT5G38396 29.388 245 143 9 21 255 2 226 1.57e-13 72.8
MS.gene66626.t1 AT3G59190 31.217 189 114 6 5 191 1 175 1.77e-13 73.2
MS.gene66626.t1 AT2G29930 24.701 502 280 25 18 473 9 458 1.83e-13 72.8
MS.gene66626.t1 AT2G29930 24.701 502 280 25 18 473 9 458 1.83e-13 72.8
MS.gene66626.t1 AT3G59190 31.217 189 114 6 5 191 1 175 1.83e-13 72.4
MS.gene66626.t1 AT1G55030 26.087 437 245 20 15 432 3 380 1.93e-13 72.4
MS.gene66626.t1 AT5G22700 25.813 461 264 19 4 436 29 439 2.24e-13 72.4
MS.gene66626.t1 AT5G56810 27.292 469 271 20 21 471 15 431 4.00e-13 71.6
MS.gene66626.t1 AT3G58940 30.556 216 120 7 21 226 2 197 5.29e-13 71.6
MS.gene66626.t1 AT3G58940 30.556 216 120 7 21 226 2 197 5.29e-13 71.6
MS.gene66626.t1 AT1G05080 26.763 482 274 19 18 473 10 438 6.16e-13 70.9
MS.gene66626.t1 AT5G22700 27.687 307 166 12 4 288 29 301 2.26e-12 69.3
MS.gene66626.t1 AT1G66300 25.466 483 286 20 13 471 21 453 4.67e-12 68.2
MS.gene66626.t1 AT5G22700 25.843 445 253 18 21 436 6 402 7.26e-12 67.8
MS.gene66626.t1 AT5G22700 25.843 445 253 18 21 436 6 402 7.26e-12 67.8
MS.gene66626.t1 AT5G22700 25.843 445 253 18 21 436 6 402 7.26e-12 67.8
MS.gene66626.t1 AT5G22700 25.843 445 253 18 21 436 6 402 7.26e-12 67.8
MS.gene66626.t1 AT3G51530 25.259 483 273 21 21 474 30 453 1.03e-11 67.4
MS.gene66626.t1 AT4G00320 27.650 217 131 8 18 226 10 208 1.49e-11 67.0
MS.gene66626.t1 AT1G60400 30.252 238 134 8 17 250 10 219 2.02e-11 66.2
MS.gene66626.t1 AT5G44980 25.949 474 286 18 21 473 4 433 2.86e-11 65.9
MS.gene66626.t1 AT5G44980 25.949 474 286 18 21 473 4 433 2.86e-11 65.9
MS.gene66626.t1 AT4G27050 26.818 220 127 7 20 226 3 201 2.90e-11 65.9
MS.gene66626.t1 AT4G27050 26.818 220 127 7 20 226 3 201 2.90e-11 65.9
MS.gene66626.t1 AT4G27050 26.818 220 127 7 20 226 3 201 2.90e-11 65.9
MS.gene66626.t1 AT4G27050 26.818 220 127 7 20 226 3 201 2.90e-11 65.9
MS.gene66626.t1 AT4G27050 26.818 220 127 7 20 226 3 201 2.90e-11 65.9
MS.gene66626.t1 AT3G44060 27.434 226 138 6 23 248 1 200 3.39e-11 65.5
MS.gene66626.t1 AT3G52680 30.047 213 120 7 19 229 19 204 4.66e-11 64.7
MS.gene66626.t1 AT5G56440 30.806 211 111 8 21 226 2 182 5.67e-11 64.7
MS.gene66626.t1 AT5G50270 29.858 211 114 7 21 226 2 183 6.09e-11 63.9
MS.gene66626.t1 AT5G56390 27.235 481 264 24 21 473 2 424 7.10e-11 64.7
MS.gene66626.t1 AT5G41830 28.111 217 130 8 18 226 10 208 7.44e-11 64.7

Find 132 sgRNAs with CRISPR-Local

Find 150 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATTTAAATTGCGAAATTC+TGG 0.222639 4.3:+49474897 None:intergenic
AGGTTGGATTCGAGACATTT+AGG 0.278823 4.3:+49474640 None:intergenic
TGAAAATACTGCAGTCTTAT+CGG 0.283959 4.3:-49475524 MS.gene66626:intron
AAACCTTGCAACTCTGAATT+AGG 0.290420 4.3:+49474796 None:intergenic
GTAAATCATGGTTTCTCTTT+CGG 0.296644 4.3:+49475066 None:intergenic
TTCTTCTTTCCGTCGTTTAG+AGG 0.297454 4.3:+49476079 None:intergenic
ATCTTTCGCAATTCTCTGTT+CGG 0.311926 4.3:+49475870 None:intergenic
ATGTCAAGTTCCACGATGCC+TGG 0.349837 4.3:+49475434 None:intergenic
GATTCAACTGTGTCTCCTTA+AGG 0.351050 4.3:-49474421 None:intergenic
GTCAGTGAATTTCAACCTCT+TGG 0.363258 4.3:+49475280 None:intergenic
TCTTTCGCAATTCTCTGTTC+GGG 0.363706 4.3:+49475871 None:intergenic
TCATTACTTGCATTTCTCTC+TGG 0.365677 4.3:-49475377 MS.gene66626:CDS
GTGGCTATGGAGGTTCTTGT+TGG 0.367455 4.3:+49475981 None:intergenic
GAGGAGGAACCGTCACCTTT+AGG 0.369515 4.3:-49474691 MS.gene66626:CDS
CTTCAACTCGAATCTTCTGC+TGG 0.371331 4.3:-49474853 MS.gene66626:CDS
ATGTGGCATAAGAGTGGTTC+TGG 0.375392 4.3:+49476017 None:intergenic
GGGAACTTTGGTCAAGAATC+CGG 0.385772 4.3:+49475316 None:intergenic
CATGGTTTCTCTTTCGGAGT+TGG 0.393069 4.3:+49475072 None:intergenic
CTGGAGACTGTGTTGATATG+TGG 0.400388 4.3:-49475740 MS.gene66626:CDS
CTGACATATGTTCACATAGA+AGG 0.408606 4.3:-49474619 MS.gene66626:CDS
GGCAGAGCCCCTTGGTATAT+CGG 0.416227 4.3:+49474462 None:intergenic
AAAGCCACATTGGGCATCAT+TGG 0.416481 4.3:-49475173 MS.gene66626:CDS
TTCCTCTCGTCTCTCGTCGC+TGG 0.419361 4.3:-49475956 MS.gene66626:CDS
GTACCAATCTTGTTTCTCTC+AGG 0.424774 4.3:-49475617 MS.gene66626:intron
GACGAGAGGAAGGGTGGCTA+TGG 0.428174 4.3:+49475968 None:intergenic
GGAAGGTGGCACGGGAACTT+TGG 0.436620 4.3:+49475304 None:intergenic
TCACTGACAGGAAATTCTCT+TGG 0.441841 4.3:-49475265 MS.gene66626:CDS
TGGCTATGGAGGTTCTTGTT+GGG 0.444574 4.3:+49475982 None:intergenic
GTACAATCGAAGAATGAATT+CGG 0.445873 4.3:+49475636 None:intergenic
CAGAAGATTCGAGTTGAAGC+AGG 0.450096 4.3:+49474857 None:intergenic
TTAGGAACTATTGTTGACTT+TGG 0.451352 4.3:+49474658 None:intergenic
TTTCGGAGTTGGCTGAGCAT+AGG 0.458774 4.3:+49475083 None:intergenic
CTCGTCGCTGGAACAACCTA+TGG 0.461620 4.3:-49475944 MS.gene66626:CDS
AAGAATGTTGAATCATCATA+TGG 0.462391 4.3:+49475495 None:intergenic
TTCCGATTGGATTGATGTAA+AGG 0.470269 4.3:-49475225 MS.gene66626:CDS
TTCTTGTTGGGAGGAAGGAG+AGG 0.476181 4.3:+49475994 None:intergenic
TTCGGAGTTGGCTGAGCATA+GGG 0.478264 4.3:+49475084 None:intergenic
GTTCGGGTTTGAGTCGGAGT+TGG 0.479112 4.3:+49475887 None:intergenic
TCCAATCGGAATCTATTTCA+AGG 0.484930 4.3:+49475237 None:intergenic
TTTGGCTCCCATGTTCCTAA+AGG 0.490702 4.3:+49474676 None:intergenic
TTCTCTGTTCGGGTTTGAGT+CGG 0.494123 4.3:+49475881 None:intergenic
CTCTTGGAGGAAGGTGGCAC+GGG 0.496228 4.3:+49475296 None:intergenic
AGCGACGAGAGACGAGAGGA+AGG 0.496627 4.3:+49475958 None:intergenic
GTTCTGGTAGAGTGCTTAAT+CGG 0.501543 4.3:+49476033 None:intergenic
CTTCTATGTGAACATATGTC+AGG 0.503868 4.3:+49474620 None:intergenic
GGAGGTTCTTGTTGGGAGGA+AGG 0.503902 4.3:+49475989 None:intergenic
GACAAATTCACTTTCGCGCA+GGG 0.507390 4.3:+49475109 None:intergenic
AGCATTGCAAAAGCCACATT+GGG 0.507530 4.3:-49475182 MS.gene66626:CDS
GCCTTGAAATAGATTCCGAT+TGG 0.509834 4.3:-49475238 MS.gene66626:CDS
GAAGAAGAAAACAACGGCGG+AGG 0.512346 4.3:-49476062 MS.gene66626:CDS
GTTCACATAGAAGGATATCA+AGG 0.515530 4.3:-49474610 MS.gene66626:CDS
CAGTTGAATCAAATTTAAGT+TGG 0.518323 4.3:+49474434 None:intergenic
AAGTACAAGTTGAGCTCCAC+GGG 0.520114 4.3:+49475662 None:intergenic
GTCCTTTACATCAATCCAAT+CGG 0.521792 4.3:+49475223 None:intergenic
GTATCCAGAGTTTCGAGTAC+GGG 0.523173 4.3:+49475350 None:intergenic
GTTTGAGTCGGAGTTGGTGT+CGG 0.528860 4.3:+49475893 None:intergenic
AGAGGTTGAAATTCACTGAC+AGG 0.534424 4.3:-49475277 MS.gene66626:CDS
CTATGGAGGTTCTTGTTGGG+AGG 0.536477 4.3:+49475985 None:intergenic
ATCTTCAACATCTTCAGTGA+TGG 0.536558 4.3:+49475461 None:intergenic
GCAAAAGTAGATGTAAATCA+TGG 0.538053 4.3:+49475054 None:intergenic
TAGCATTGCAAAAGCCACAT+TGG 0.539738 4.3:-49475183 MS.gene66626:CDS
CGACAAATTCACTTTCGCGC+AGG 0.539935 4.3:+49475108 None:intergenic
TGGCATGTGGCAGAGCCCCT+TGG 0.542664 4.3:+49474454 None:intergenic
AACCGTCACCTTTAGGAACA+TGG 0.542949 4.3:-49474684 MS.gene66626:CDS
TTCAACTCGAATCTTCTGCT+GGG 0.545683 4.3:-49474852 MS.gene66626:CDS
TGTCAAGTTCCACGATGCCT+GGG 0.547011 4.3:+49475435 None:intergenic
TGGAGACTGTGTTGATATGT+GGG 0.548300 4.3:-49475739 MS.gene66626:CDS
GAGAGGAAGGGTGGCTATGG+AGG 0.548439 4.3:+49475971 None:intergenic
GAGCGACAGTTCTTCAAGGT+GGG 0.550146 4.3:+49475698 None:intergenic
GGAACTTTGGTCAAGAATCC+GGG 0.551658 4.3:+49475317 None:intergenic
AGTATCCAGAGTTTCGAGTA+CGG 0.555745 4.3:+49475349 None:intergenic
TTGGGAGGAAGGAGAGGATG+TGG 0.557034 4.3:+49476000 None:intergenic
TGGTAGAGTGCTTAATCGGT+CGG 0.558863 4.3:+49476037 None:intergenic
CCTCTTGGAGGAAGGTGGCA+CGG 0.558989 4.3:+49475295 None:intergenic
TCAAGGATTCGAAGAGGACC+TGG 0.560349 4.3:-49474593 MS.gene66626:CDS
AATTTCAACCTCTTGGAGGA+AGG 0.560470 4.3:+49475287 None:intergenic
ATGTGGGTCCGTGCTGCTGT+GGG 0.561915 4.3:-49475723 MS.gene66626:CDS
TATCGAGCGACAGTTCTTCA+AGG 0.562121 4.3:+49475694 None:intergenic
AGATATATTCAGCAAATGCC+AGG 0.565874 4.3:+49474575 None:intergenic
TCCCATGTTCCTAAAGGTGA+CGG 0.566310 4.3:+49474682 None:intergenic
AAGGACGGTGGTAGTGTTAG+CGG 0.566669 4.3:-49475206 MS.gene66626:CDS
TTTGCGTCATTCGACATCAA+AGG 0.568262 4.3:-49475036 MS.gene66626:intron
ATGAAACTTTCTAATCTCGC+GGG 0.568598 4.3:+49475797 None:intergenic
ATCAAATTTAAGTTGGCATG+TGG 0.568764 4.3:+49474441 None:intergenic
CATTGGCAACTTGCAGAGTG+TGG 0.573512 4.3:-49475156 MS.gene66626:CDS
AGAACTTGAGGCAGACATTG+TGG 0.574039 4.3:-49475402 MS.gene66626:CDS
CATAGACATTGTAGAACTTG+AGG 0.574705 4.3:-49475414 MS.gene66626:CDS
GATGAAACTTTCTAATCTCG+CGG 0.574709 4.3:+49475796 None:intergenic
GAAGTACAAGTTGAGCTCCA+CGG 0.575981 4.3:+49475661 None:intergenic
TTGCCCCGTACTCGAAACTC+TGG 0.576045 4.3:-49475354 MS.gene66626:CDS
ATACCTGAGAGAAACAAGAT+TGG 0.579262 4.3:+49475614 None:intergenic
GAGCCAAAGTACGATGGCGC+CGG 0.581535 4.3:-49476108 None:intergenic
TATGTGGGTCCGTGCTGCTG+TGG 0.582491 4.3:-49475724 MS.gene66626:CDS
GCGACGAGAGACGAGAGGAA+GGG 0.584918 4.3:+49475959 None:intergenic
AGTGAATTTCAACCTCTTGG+AGG 0.587584 4.3:+49475283 None:intergenic
TATGTGAACATATGTCAGGT+TGG 0.587643 4.3:+49474624 None:intergenic
TCTCCTAATTCAGAGTTGCA+AGG 0.589640 4.3:-49474799 MS.gene66626:intron
AGCGACAGTTCTTCAAGGTG+GGG 0.591485 4.3:+49475699 None:intergenic
CCGTGCCACCTTCCTCCAAG+AGG 0.596533 4.3:-49475295 MS.gene66626:CDS
TTCAACCTCTTGGAGGAAGG+TGG 0.598891 4.3:+49475290 None:intergenic
CTCGATATTGATAACTCCCG+TGG 0.602926 4.3:-49475678 MS.gene66626:CDS
AGGCGTCGAGATGCTTCCAT+AGG 0.604245 4.3:+49475928 None:intergenic
CGTCGTTTAGAGGTTAACTC+CGG 0.606687 4.3:+49476089 None:intergenic
ACGAGAGACGAGAGGAAGGG+TGG 0.606908 4.3:+49475962 None:intergenic
AGAAGATTCGAGTTGAAGCA+GGG 0.607774 4.3:+49474858 None:intergenic
AAAGATTAACCGATATACCA+AGG 0.607874 4.3:-49474471 MS.gene66626:CDS
AAGATTAACCGATATACCAA+GGG 0.609206 4.3:-49474470 MS.gene66626:CDS
ACCGTCACCTTTAGGAACAT+GGG 0.609424 4.3:-49474683 MS.gene66626:CDS
AAATTCTGGATAATTTAGCA+TGG 0.612407 4.3:+49474911 None:intergenic
GGTGTCGGAGTCGAAGTGGA+AGG 0.617064 4.3:+49475908 None:intergenic
CGAGCGACAGTTCTTCAAGG+TGG 0.617871 4.3:+49475697 None:intergenic
AGTTGGTGTCGGAGTCGAAG+TGG 0.619214 4.3:+49475904 None:intergenic
GAGAGGATGTGGCATAAGAG+TGG 0.633363 4.3:+49476011 None:intergenic
CATTTGCTGAATATATCTTG+CGG 0.635057 4.3:-49474570 MS.gene66626:CDS
GATTGGATTGATGTAAAGGA+CGG 0.637583 4.3:-49475221 MS.gene66626:CDS
GCTGAATATATCTTGCGGAA+CGG 0.640814 4.3:-49474565 MS.gene66626:CDS
TATCCAGAGTTTCGAGTACG+GGG 0.646023 4.3:+49475351 None:intergenic
TTCCAGCGACGAGAGACGAG+AGG 0.647004 4.3:+49475954 None:intergenic
AGGATATCAAGGATTCGAAG+AGG 0.657505 4.3:-49474599 MS.gene66626:CDS
TGGCAACTTGCAGAGTGTGG+AGG 0.661078 4.3:-49475153 MS.gene66626:CDS
TTCTGGATAATTTAGCATGG+AGG 0.661296 4.3:+49474914 None:intergenic
TTAGGAGAACTTGAAGCATG+TGG 0.662003 4.3:+49474814 None:intergenic
GGTGGGGTCCCACAGCAGCA+CGG 0.664345 4.3:+49475715 None:intergenic
AAGATGTTGAAGATCGACCC+AGG 0.669202 4.3:-49475452 MS.gene66626:CDS
CGGAAAGAAGAAGAAAACAA+CGG 0.673761 4.3:-49476068 MS.gene66626:CDS
TTTAGCATGGAGGTGCAAAG+TGG 0.682219 4.3:+49474924 None:intergenic
GAAGATCGACCCAGGCATCG+TGG 0.689614 4.3:-49475444 MS.gene66626:CDS
TGGATTGATGTAAAGGACGG+TGG 0.694120 4.3:-49475218 MS.gene66626:CDS
CGGAGTTAACCTCTAAACGA+CGG 0.709689 4.3:-49476088 MS.gene66626:CDS
AAAGAAGAAGAAAACAACGG+CGG 0.709795 4.3:-49476065 MS.gene66626:CDS
AGATTAACCGATATACCAAG+GGG 0.738387 4.3:-49474469 MS.gene66626:CDS
GTTGCCAATGATGCCCAATG+TGG 0.748421 4.3:+49475169 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATTTTTTGATACTTCAA+TGG - chr4.3:49475997-49476016 MS.gene66626:CDS 15.0%
! AAATTCTGGATAATTTAGCA+TGG + chr4.3:49475610-49475629 None:intergenic 25.0%
! AAGAATGTTGAATCATCATA+TGG + chr4.3:49475026-49475045 None:intergenic 25.0%
! AAGGTGAGATAGTATTATTA+TGG - chr4.3:49475501-49475520 MS.gene66626:CDS 25.0%
! CAGTTGAATCAAATTTAAGT+TGG + chr4.3:49476087-49476106 None:intergenic 25.0%
! TGATTTAAATTGCGAAATTC+TGG + chr4.3:49475624-49475643 None:intergenic 25.0%
AAAGATTAACCGATATACCA+AGG - chr4.3:49476047-49476066 MS.gene66626:CDS 30.0%
AAGATTAACCGATATACCAA+GGG - chr4.3:49476048-49476067 MS.gene66626:CDS 30.0%
GCAAAAGTAGATGTAAATCA+TGG + chr4.3:49475467-49475486 None:intergenic 30.0%
GTAAATCATGGTTTCTCTTT+CGG + chr4.3:49475455-49475474 None:intergenic 30.0%
GTACAATCGAAGAATGAATT+CGG + chr4.3:49474885-49474904 None:intergenic 30.0%
! CATTTGCTGAATATATCTTG+CGG - chr4.3:49475948-49475967 MS.gene66626:CDS 30.0%
! CTGCAGTATTTTCAAAAGAT+AGG + chr4.3:49474988-49475007 None:intergenic 30.0%
! TGAAAATACTGCAGTCTTAT+CGG - chr4.3:49474994-49475013 MS.gene66626:intron 30.0%
!! ATCAAATTTAAGTTGGCATG+TGG + chr4.3:49476080-49476099 None:intergenic 30.0%
!! TTAGGAACTATTGTTGACTT+TGG + chr4.3:49475863-49475882 None:intergenic 30.0%
!!! TCTGATGTTTTCAAGTTTTC+TGG - chr4.3:49474759-49474778 MS.gene66626:intron 30.0%
AAACCTTGCAACTCTGAATT+AGG + chr4.3:49475725-49475744 None:intergenic 35.0%
AAAGAAGAAGAAAACAACGG+CGG - chr4.3:49474453-49474472 MS.gene66626:CDS 35.0%
AGATATATTCAGCAAATGCC+AGG + chr4.3:49475946-49475965 None:intergenic 35.0%
AGATTAACCGATATACCAAG+GGG - chr4.3:49476049-49476068 MS.gene66626:CDS 35.0%
ATACCTGAGAGAAACAAGAT+TGG + chr4.3:49474907-49474926 None:intergenic 35.0%
ATCTTCAACATCTTCAGTGA+TGG + chr4.3:49475060-49475079 None:intergenic 35.0%
ATCTTTCGCAATTCTCTGTT+CGG + chr4.3:49474651-49474670 None:intergenic 35.0%
ATGAAACTTTCTAATCTCGC+GGG + chr4.3:49474724-49474743 None:intergenic 35.0%
CATAGACATTGTAGAACTTG+AGG - chr4.3:49475104-49475123 MS.gene66626:CDS 35.0%
CGGAAAGAAGAAGAAAACAA+CGG - chr4.3:49474450-49474469 MS.gene66626:CDS 35.0%
CTGACATATGTTCACATAGA+AGG - chr4.3:49475899-49475918 MS.gene66626:CDS 35.0%
CTTCTATGTGAACATATGTC+AGG + chr4.3:49475901-49475920 None:intergenic 35.0%
GATGAAACTTTCTAATCTCG+CGG + chr4.3:49474725-49474744 None:intergenic 35.0%
GATTGGATTGATGTAAAGGA+CGG - chr4.3:49475297-49475316 MS.gene66626:CDS 35.0%
GTCCTTTACATCAATCCAAT+CGG + chr4.3:49475298-49475317 None:intergenic 35.0%
GTTCACATAGAAGGATATCA+AGG - chr4.3:49475908-49475927 MS.gene66626:CDS 35.0%
TATGTGAACATATGTCAGGT+TGG + chr4.3:49475897-49475916 None:intergenic 35.0%
TCATTACTTGCATTTCTCTC+TGG - chr4.3:49475141-49475160 MS.gene66626:CDS 35.0%
TCCAATCGGAATCTATTTCA+AGG + chr4.3:49475284-49475303 None:intergenic 35.0%
TTCCGATTGGATTGATGTAA+AGG - chr4.3:49475293-49475312 MS.gene66626:CDS 35.0%
TTCTGGATAATTTAGCATGG+AGG + chr4.3:49475607-49475626 None:intergenic 35.0%
! AATCTTGTTTCTCTCAGGTA+TGG - chr4.3:49474906-49474925 MS.gene66626:CDS 35.0%
!!! CTGGATACTTATTTTGATCC+CGG - chr4.3:49475183-49475202 MS.gene66626:CDS 35.0%
AATTTCAACCTCTTGGAGGA+AGG + chr4.3:49475234-49475253 None:intergenic 40.0%
ACGTCTTGTGCACAAAACAA+GGG + chr4.3:49475572-49475591 None:intergenic 40.0%
AGAGGTTGAAATTCACTGAC+AGG - chr4.3:49475241-49475260 MS.gene66626:CDS 40.0%
AGCATTGCAAAAGCCACATT+GGG - chr4.3:49475336-49475355 MS.gene66626:CDS 40.0%
AGGATATCAAGGATTCGAAG+AGG - chr4.3:49475919-49475938 MS.gene66626:CDS 40.0%
AGGTTGGATTCGAGACATTT+AGG + chr4.3:49475881-49475900 None:intergenic 40.0%
AGTGAATTTCAACCTCTTGG+AGG + chr4.3:49475238-49475257 None:intergenic 40.0%
GCCTTGAAATAGATTCCGAT+TGG - chr4.3:49475280-49475299 MS.gene66626:CDS 40.0%
GCTGAATATATCTTGCGGAA+CGG - chr4.3:49475953-49475972 MS.gene66626:CDS 40.0%
GTCAGTGAATTTCAACCTCT+TGG + chr4.3:49475241-49475260 None:intergenic 40.0%
TAGCATTGCAAAAGCCACAT+TGG - chr4.3:49475335-49475354 MS.gene66626:CDS 40.0%
TCACTGACAGGAAATTCTCT+TGG - chr4.3:49475253-49475272 MS.gene66626:CDS 40.0%
TCTCCTAATTCAGAGTTGCA+AGG - chr4.3:49475719-49475738 MS.gene66626:CDS 40.0%
TCTTTCGCAATTCTCTGTTC+GGG + chr4.3:49474650-49474669 None:intergenic 40.0%
TTAGGAGAACTTGAAGCATG+TGG + chr4.3:49475707-49475726 None:intergenic 40.0%
TTCAACTCGAATCTTCTGCT+GGG - chr4.3:49475666-49475685 MS.gene66626:CDS 40.0%
TTCTTCTTTCCGTCGTTTAG+AGG + chr4.3:49474442-49474461 None:intergenic 40.0%
TTTGCGTCATTCGACATCAA+AGG - chr4.3:49475482-49475501 MS.gene66626:CDS 40.0%
! AGTATCCAGAGTTTCGAGTA+CGG + chr4.3:49475172-49475191 None:intergenic 40.0%
! GTACCAATCTTGTTTCTCTC+AGG - chr4.3:49474901-49474920 MS.gene66626:CDS 40.0%
! GTTCTGGTAGAGTGCTTAAT+CGG + chr4.3:49474488-49474507 None:intergenic 40.0%
! TGGAGACTGTGTTGATATGT+GGG - chr4.3:49474779-49474798 MS.gene66626:intron 40.0%
! TTCTAATCTCGCGGGATTTT+CGG + chr4.3:49474716-49474735 None:intergenic 40.0%
!! AGAAGATTCGAGTTGAAGCA+GGG + chr4.3:49475663-49475682 None:intergenic 40.0%
AAAGCCACATTGGGCATCAT+TGG - chr4.3:49475345-49475364 MS.gene66626:CDS 45.0%
AAGATGTTGAAGATCGACCC+AGG - chr4.3:49475066-49475085 MS.gene66626:CDS 45.0%
AGAACTTGAGGCAGACATTG+TGG - chr4.3:49475116-49475135 MS.gene66626:CDS 45.0%
ATGTGGCATAAGAGTGGTTC+TGG + chr4.3:49474504-49474523 None:intergenic 45.0%
CACGTCTTGTGCACAAAACA+AGG + chr4.3:49475573-49475592 None:intergenic 45.0%
CATGGTTTCTCTTTCGGAGT+TGG + chr4.3:49475449-49475468 None:intergenic 45.0%
CGGAGTTAACCTCTAAACGA+CGG - chr4.3:49474430-49474449 MS.gene66626:CDS 45.0%
CGTCGTTTAGAGGTTAACTC+CGG + chr4.3:49474432-49474451 None:intergenic 45.0%
CTTCAACTCGAATCTTCTGC+TGG - chr4.3:49475665-49475684 MS.gene66626:CDS 45.0%
CTTGTGCACAAAACAAGGGA+GGG + chr4.3:49475568-49475587 None:intergenic 45.0%
GACAAATTCACTTTCGCGCA+GGG + chr4.3:49475412-49475431 None:intergenic 45.0%
GGAACTTTGGTCAAGAATCC+GGG + chr4.3:49475204-49475223 None:intergenic 45.0%
GGGAACTTTGGTCAAGAATC+CGG + chr4.3:49475205-49475224 None:intergenic 45.0%
TATCGAGCGACAGTTCTTCA+AGG + chr4.3:49474827-49474846 None:intergenic 45.0%
TCATTGTGTCCCTTGTTGGT+AGG - chr4.3:49475805-49475824 MS.gene66626:CDS 45.0%
TCCCATGTTCCTAAAGGTGA+CGG + chr4.3:49475839-49475858 None:intergenic 45.0%
TCTTGTGCACAAAACAAGGG+AGG + chr4.3:49475569-49475588 None:intergenic 45.0%
TGAGTCATTGTGTCCCTTGT+TGG - chr4.3:49475801-49475820 MS.gene66626:CDS 45.0%
TGGATTGATGTAAAGGACGG+TGG - chr4.3:49475300-49475319 MS.gene66626:CDS 45.0%
TGGCTATGGAGGTTCTTGTT+GGG + chr4.3:49474539-49474558 None:intergenic 45.0%
! AACCGTCACCTTTAGGAACA+TGG - chr4.3:49475834-49475853 MS.gene66626:CDS 45.0%
! AAGTACAAGTTGAGCTCCAC+GGG + chr4.3:49474859-49474878 None:intergenic 45.0%
! ACCGTCACCTTTAGGAACAT+GGG - chr4.3:49475835-49475854 MS.gene66626:CDS 45.0%
! CTCGATATTGATAACTCCCG+TGG - chr4.3:49474840-49474859 MS.gene66626:CDS 45.0%
! CTGGAGACTGTGTTGATATG+TGG - chr4.3:49474778-49474797 MS.gene66626:intron 45.0%
! GAAGTACAAGTTGAGCTCCA+CGG + chr4.3:49474860-49474879 None:intergenic 45.0%
! GTATCCAGAGTTTCGAGTAC+GGG + chr4.3:49475171-49475190 None:intergenic 45.0%
! TATCCAGAGTTTCGAGTACG+GGG + chr4.3:49475170-49475189 None:intergenic 45.0%
! TGGTAGAGTGCTTAATCGGT+CGG + chr4.3:49474484-49474503 None:intergenic 45.0%
! TTCTCTGTTCGGGTTTGAGT+CGG + chr4.3:49474640-49474659 None:intergenic 45.0%
! TTTAGCATGGAGGTGCAAAG+TGG + chr4.3:49475597-49475616 None:intergenic 45.0%
! TTTGGCTCCCATGTTCCTAA+AGG + chr4.3:49475845-49475864 None:intergenic 45.0%
!! CAGAAGATTCGAGTTGAAGC+AGG + chr4.3:49475664-49475683 None:intergenic 45.0%
!!! CTTGTTTTGTGCACAAGACG+TGG - chr4.3:49475571-49475590 MS.gene66626:intron 45.0%
AGCGACAGTTCTTCAAGGTG+GGG + chr4.3:49474822-49474841 None:intergenic 50.0%
ATGTCAAGTTCCACGATGCC+TGG + chr4.3:49475087-49475106 None:intergenic 50.0%
CATTGGCAACTTGCAGAGTG+TGG - chr4.3:49475362-49475381 MS.gene66626:CDS 50.0%
CGACAAATTCACTTTCGCGC+AGG + chr4.3:49475413-49475432 None:intergenic 50.0%
CTATGGAGGTTCTTGTTGGG+AGG + chr4.3:49474536-49474555 None:intergenic 50.0%
GAAGAAGAAAACAACGGCGG+AGG - chr4.3:49474456-49474475 MS.gene66626:CDS 50.0%
GAGAGGATGTGGCATAAGAG+TGG + chr4.3:49474510-49474529 None:intergenic 50.0%
GAGCGACAGTTCTTCAAGGT+GGG + chr4.3:49474823-49474842 None:intergenic 50.0%
GTGGCTATGGAGGTTCTTGT+TGG + chr4.3:49474540-49474559 None:intergenic 50.0%
GTTCCTCCTCCTACCAACAA+GGG + chr4.3:49475817-49475836 None:intergenic 50.0%
GTTGCCAATGATGCCCAATG+TGG + chr4.3:49475352-49475371 None:intergenic 50.0%
TCAAGGATTCGAAGAGGACC+TGG - chr4.3:49475925-49475944 MS.gene66626:CDS 50.0%
TGTCAAGTTCCACGATGCCT+GGG + chr4.3:49475086-49475105 None:intergenic 50.0%
TTCAACCTCTTGGAGGAAGG+TGG + chr4.3:49475231-49475250 None:intergenic 50.0%
TTCGGAGTTGGCTGAGCATA+GGG + chr4.3:49475437-49475456 None:intergenic 50.0%
TTCTTGTTGGGAGGAAGGAG+AGG + chr4.3:49474527-49474546 None:intergenic 50.0%
TTTCGGAGTTGGCTGAGCAT+AGG + chr4.3:49475438-49475457 None:intergenic 50.0%
! AAGGACGGTGGTAGTGTTAG+CGG - chr4.3:49475312-49475331 MS.gene66626:CDS 50.0%
! TTGTGTCCCTTGTTGGTAGG+AGG - chr4.3:49475808-49475827 MS.gene66626:CDS 50.0%
!! GTTTGAGTCGGAGTTGGTGT+CGG + chr4.3:49474628-49474647 None:intergenic 50.0%
CGAGCGACAGTTCTTCAAGG+TGG + chr4.3:49474824-49474843 None:intergenic 55.0%
CTCGTCGCTGGAACAACCTA+TGG - chr4.3:49474574-49474593 MS.gene66626:CDS 55.0%
GAGGAGGAACCGTCACCTTT+AGG - chr4.3:49475827-49475846 MS.gene66626:CDS 55.0%
GGAGGTTCTTGTTGGGAGGA+AGG + chr4.3:49474532-49474551 None:intergenic 55.0%
GGCAGAGCCCCTTGGTATAT+CGG + chr4.3:49476059-49476078 None:intergenic 55.0%
GGTTCCTCCTCCTACCAACA+AGG + chr4.3:49475818-49475837 None:intergenic 55.0%
TGGCAACTTGCAGAGTGTGG+AGG - chr4.3:49475365-49475384 MS.gene66626:CDS 55.0%
TTGCCCCGTACTCGAAACTC+TGG - chr4.3:49475164-49475183 MS.gene66626:CDS 55.0%
TTGGGAGGAAGGAGAGGATG+TGG + chr4.3:49474521-49474540 None:intergenic 55.0%
! GGATTTTCGGAGCGAGAGGA+CGG + chr4.3:49474703-49474722 None:intergenic 55.0%
! GTTCGGGTTTGAGTCGGAGT+TGG + chr4.3:49474634-49474653 None:intergenic 55.0%
! TGTCCCTTGTTGGTAGGAGG+AGG - chr4.3:49475811-49475830 MS.gene66626:CDS 55.0%
!! AGGCGTCGAGATGCTTCCAT+AGG + chr4.3:49474593-49474612 None:intergenic 55.0%
!! AGTTGGTGTCGGAGTCGAAG+TGG + chr4.3:49474617-49474636 None:intergenic 55.0%
ACGAGAGACGAGAGGAAGGG+TGG + chr4.3:49474559-49474578 None:intergenic 60.0%
AGCGACGAGAGACGAGAGGA+AGG + chr4.3:49474563-49474582 None:intergenic 60.0%
CCTCTTGGAGGAAGGTGGCA+CGG + chr4.3:49475226-49475245 None:intergenic 60.0%
CTCTTGGAGGAAGGTGGCAC+GGG + chr4.3:49475225-49475244 None:intergenic 60.0%
GACGAGAGGAAGGGTGGCTA+TGG + chr4.3:49474553-49474572 None:intergenic 60.0%
GAGAGGAAGGGTGGCTATGG+AGG + chr4.3:49474550-49474569 None:intergenic 60.0%
GCGACGAGAGACGAGAGGAA+GGG + chr4.3:49474562-49474581 None:intergenic 60.0%
GGAAGGTGGCACGGGAACTT+TGG + chr4.3:49475217-49475236 None:intergenic 60.0%
TTCCAGCGACGAGAGACGAG+AGG + chr4.3:49474567-49474586 None:intergenic 60.0%
TTCCTCTCGTCTCTCGTCGC+TGG - chr4.3:49474562-49474581 MS.gene66626:CDS 60.0%
! ATGTGGGTCCGTGCTGCTGT+GGG - chr4.3:49474795-49474814 MS.gene66626:intron 60.0%
! GAAGATCGACCCAGGCATCG+TGG - chr4.3:49475074-49475093 MS.gene66626:CDS 60.0%
! GGTGTCGGAGTCGAAGTGGA+AGG + chr4.3:49474613-49474632 None:intergenic 60.0%
! TATGTGGGTCCGTGCTGCTG+TGG - chr4.3:49474794-49474813 MS.gene66626:intron 60.0%
CCGTGCCACCTTCCTCCAAG+AGG - chr4.3:49475223-49475242 MS.gene66626:CDS 65.0%
TGGCATGTGGCAGAGCCCCT+TGG + chr4.3:49476067-49476086 None:intergenic 65.0%
! CGCGGGATTTTCGGAGCGAG+AGG + chr4.3:49474707-49474726 None:intergenic 65.0%
GGTGGGGTCCCACAGCAGCA+CGG + chr4.3:49474806-49474825 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 49474423 49476117 49474423 ID=MS.gene66626
chr4.3 mRNA 49474423 49476117 49474423 ID=MS.gene66626.t1;Parent=MS.gene66626
chr4.3 exon 49475618 49476117 49475618 ID=MS.gene66626.t1.exon1;Parent=MS.gene66626.t1
chr4.3 CDS 49475618 49476117 49475618 ID=cds.MS.gene66626.t1;Parent=MS.gene66626.t1
chr4.3 exon 49475037 49475532 49475037 ID=MS.gene66626.t1.exon2;Parent=MS.gene66626.t1
chr4.3 CDS 49475037 49475532 49475037 ID=cds.MS.gene66626.t1;Parent=MS.gene66626.t1
chr4.3 exon 49474800 49474952 49474800 ID=MS.gene66626.t1.exon3;Parent=MS.gene66626.t1
chr4.3 CDS 49474800 49474952 49474800 ID=cds.MS.gene66626.t1;Parent=MS.gene66626.t1
chr4.3 exon 49474423 49474713 49474423 ID=MS.gene66626.t1.exon4;Parent=MS.gene66626.t1
chr4.3 CDS 49474423 49474713 49474423 ID=cds.MS.gene66626.t1;Parent=MS.gene66626.t1
Gene Sequence

>MS.gene66626

ATGGCGCCGGAGTTAACCTCTAAACGACGGAAAGAAGAAGAAAACAACGGCGGAGGCACCGACCGATTAAGCACTCTACCAGAACCACTCTTATGCCACATCCTCTCCTTCCTCCCAACAAGAACCTCCATAGCCACCCTTCCTCTCGTCTCTCGTCGCTGGAACAACCTATGGAAGCATCTCGACGCCTTCCACTTCGACTCCGACACCAACTCCGACTCAAACCCGAACAGAGAATTGCGAAAGATTTTCAAAAGATTTGCGTTCTTCGTCAACGCCGTCCTCTCGCTCCGAAAATCCCGCGAGATTAGAAAGTTTCATCTAAGCTGCAGTATCTCTGATGTTTTCAAGTTTTCTGGAGACTGTGTTGATATGTGGGTCCGTGCTGCTGTGGGACCCCACCTTGAAGAACTGTCGCTCGATATTGATAACTCCCGTGGAGCTCAACTTGTACTTCTTCCGAATTCATTCTTCGATTGTACCAATCTTGTTTCTCTCAGGTATGGAGAATACATCTATTTTTTTAAATAAGCTGATATATTATACATATAATGTTATGTAACCTATCTTTTGAAAATACTGCAGTCTTATCGGTTCAATCCATATGATGATTCAACATTCTTCAGTTCATTTTCCATCACTGAAGATGTTGAAGATCGACCCAGGCATCGTGGAACTTGACATAGACATTGTAGAACTTGAGGCAGACATTGTGGATTCATTACTTGCATTTCTCTCTGGTTGCCCCGTACTCGAAACTCTGGATACTTATTTTGATCCCGGATTCTTGACCAAAGTTCCCGTGCCACCTTCCTCCAAGAGGTTGAAATTCACTGACAGGAAATTCTCTTGGACTTGCCTTGAAATAGATTCCGATTGGATTGATGTAAAGGACGGTGGTAGTGTTAGCGGTAGCATTGCAAAAGCCACATTGGGCATCATTGGCAACTTGCAGAGTGTGGAGGAAGCATATCTTGATGTCTTTTCCCTGCGCGAAAGTGAATTTGTCGACCCTATGCTCAGCCAACTCCGAAAGAGAAACCATGATTTACATCTACTTTTGCGTCATTCGACATCAAAGGTGAGATAGTATTATTATGGTTTATACGTATTTATATATGTAGTTTTGTACTAATATTGTGCCCTCCCTTGTTTTGTGCACAAGACGTGGCCACTTTGCACCTCCATGCTAAATTATCCAGAATTTCGCAATTTAAATCATCTAAAGTTCATTCTTCCCTGCTTCAACTCGAATCTTCTGCTGGGCGTGCTTGAGAAATGCCACATGCTTCAAGTTCTCCTAATTCAGAGTTGCAAGGTTTGTTGAGTTCTTGAGTTCAATCAAATGTATGTATCTATACACACACAAATATGTTTTTGAGTCATTGTGTCCCTTGTTGGTAGGAGGAGGAACCGTCACCTTTAGGAACATGGGAGCCAAAGTCAACAATAGTTCCTAAATGTCTCGAATCCAACCTGACATATGTTCACATAGAAGGATATCAAGGATTCGAAGAGGACCTGGCATTTGCTGAATATATCTTGCGGAACGGACTTGTTTTGCACACAATGCTTATATTTTTTGATACTTCAATGGATCTAACTAACAAGTATCGTTCACTCAAAAGATTAACCGATATACCAAGGGGCTCTGCCACATGCCAACTTAAATTTGATTCAACTGTGTCTCCTTAA

Protein sequence

>MS.gene66626.t1

MAPELTSKRRKEEENNGGGTDRLSTLPEPLLCHILSFLPTRTSIATLPLVSRRWNNLWKHLDAFHFDSDTNSDSNPNRELRKIFKRFAFFVNAVLSLRKSREIRKFHLSCSISDVFKFSGDCVDMWVRAAVGPHLEELSLDIDNSRGAQLVLLPNSFFDCTNLVSLSLIGSIHMMIQHSSVHFPSLKMLKIDPGIVELDIDIVELEADIVDSLLAFLSGCPVLETLDTYFDPGFLTKVPVPPSSKRLKFTDRKFSWTCLEIDSDWIDVKDGGSVSGSIAKATLGIIGNLQSVEEAYLDVFSLRESEFVDPMLSQLRKRNHDLHLLLRHSTSKTWPLCTSMLNYPEFRNLNHLKFILPCFNSNLLLGVLEKCHMLQVLLIQSCKEEEPSPLGTWEPKSTIVPKCLESNLTYVHIEGYQGFEEDLAFAEYILRNGLVLHTMLIFFDTSMDLTNKYRSLKRLTDIPRGSATCQLKFDSTVSP