AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene34824


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34824.t1 MTR_8g062310 86.009 436 58 3 1 436 1 433 0.0 746
MS.gene34824.t1 MTR_8g070950 57.930 454 150 12 6 436 4 439 1.20e-164 471
MS.gene34824.t1 MTR_8g062080 57.174 453 164 11 1 431 1 445 1.03e-159 458
MS.gene34824.t1 MTR_8g062010 58.491 424 157 9 25 431 9 430 1.42e-153 442
MS.gene34824.t1 MTR_8g058965 53.244 447 170 8 24 432 12 457 3.79e-143 417
MS.gene34824.t1 MTR_8g469020 51.542 454 174 9 25 436 7 456 5.53e-143 416
MS.gene34824.t1 MTR_8g062300 50.728 481 191 11 1 435 1 481 1.11e-140 411
MS.gene34824.t1 MTR_4g050250 49.764 424 162 11 1 377 1 420 4.20e-124 367
MS.gene34824.t1 MTR_8g467790 45.685 394 146 12 24 385 147 504 1.48e-89 281
MS.gene34824.t1 MTR_8g468810 39.659 469 235 16 4 431 2 463 8.26e-82 259
MS.gene34824.t1 MTR_2g083840 39.254 456 237 13 8 431 10 457 1.18e-81 259
MS.gene34824.t1 MTR_8g058970 38.589 482 232 18 6 431 4 477 6.33e-78 250
MS.gene34824.t1 MTR_8g062270 38.190 453 220 16 24 430 15 453 2.12e-76 245
MS.gene34824.t1 MTR_8g014260 38.126 459 240 17 6 431 4 451 5.69e-76 244
MS.gene34824.t1 MTR_4g032730 38.495 465 228 16 19 430 7 466 1.04e-73 239
MS.gene34824.t1 MTR_8g467800 37.607 468 246 15 5 436 1 458 4.01e-72 234
MS.gene34824.t1 MTR_2g086020 40.827 387 161 11 51 436 1 320 4.54e-72 230
MS.gene34824.t1 MTR_5g092960 35.345 464 237 13 17 430 11 461 1.10e-69 228
MS.gene34824.t1 MTR_8g468840 38.235 442 227 17 25 428 14 447 1.42e-66 219
MS.gene34824.t1 MTR_8g468760 36.830 448 205 17 24 430 8 418 1.95e-62 208
MS.gene34824.t1 MTR_8g445780 39.952 413 192 21 5 384 1 390 1.68e-61 204
MS.gene34824.t1 MTR_8g077460 36.842 437 187 18 19 431 4 375 4.72e-59 197
MS.gene34824.t1 MTR_8g468810 39.788 377 181 15 4 341 2 371 2.30e-57 193
MS.gene34824.t1 MTR_8g014160 34.375 448 196 16 22 431 38 425 2.36e-49 173
MS.gene34824.t1 MTR_8g468810 40.461 304 143 12 4 275 2 299 5.87e-48 167
MS.gene34824.t1 MTR_8g468810 40.461 304 143 12 4 275 2 299 1.14e-47 166
MS.gene34824.t1 MTR_8g468810 40.461 304 143 12 4 275 2 299 1.42e-47 167
MS.gene34824.t1 MTR_5g092960 34.426 366 184 10 17 336 11 366 1.38e-44 160
MS.gene34824.t1 MTR_4g024710 36.824 296 161 12 156 431 58 347 1.44e-39 145
MS.gene34824.t1 MTR_1g041245 28.910 422 241 16 24 431 10 386 1.08e-36 138
MS.gene34824.t1 MTR_5g008950 30.166 421 230 19 27 435 1 369 7.06e-36 136
MS.gene34824.t1 MTR_8g014210 36.538 260 128 8 173 431 8 231 2.88e-35 130
MS.gene34824.t1 MTR_5g021550 48.521 169 61 8 5 155 2 162 1.49e-34 126
MS.gene34824.t1 MTR_8g467800 38.047 297 154 11 5 275 1 293 4.79e-34 130
MS.gene34824.t1 MTR_5g084070 27.685 419 275 10 23 423 11 419 1.91e-32 128
MS.gene34824.t1 MTR_5g080710 29.439 428 277 13 23 430 31 453 1.36e-31 125
MS.gene34824.t1 MTR_7g056433 28.640 419 246 16 25 431 12 389 3.74e-30 120
MS.gene34824.t1 MTR_3g108150 28.401 419 242 14 25 430 13 386 2.03e-29 118
MS.gene34824.t1 MTR_4g024745 36.364 264 143 10 170 414 27 284 3.60e-29 115
MS.gene34824.t1 MTR_7g098570 28.090 445 248 15 2 430 4 392 3.69e-29 119
MS.gene34824.t1 MTR_7g098510 27.376 442 251 14 6 431 4 391 1.52e-28 116
MS.gene34824.t1 MTR_3g023630 29.439 428 225 21 22 431 5 373 5.16e-28 114
MS.gene34824.t1 MTR_1089s0010 27.869 427 241 20 21 431 4 379 4.89e-27 112
MS.gene34824.t1 MTR_5g073420 28.109 402 221 14 16 403 2 349 1.01e-26 110
MS.gene34824.t1 MTR_7g098480 29.054 444 237 16 6 430 4 388 1.16e-26 112
MS.gene34824.t1 MTR_2g007450 28.817 465 244 22 9 431 2 421 4.06e-26 110
MS.gene34824.t1 MTR_3g107100 27.752 436 238 17 25 431 11 398 5.78e-26 109
MS.gene34824.t1 MTR_7g032370 28.398 412 217 16 37 431 2 352 5.94e-26 108
MS.gene34824.t1 MTR_8g014290 43.671 158 60 8 23 156 8 160 1.62e-25 102
MS.gene34824.t1 MTR_3g036250 26.603 421 230 17 25 428 5 363 1.95e-25 107
MS.gene34824.t1 MTR_5g008920 27.146 431 245 17 17 431 4 381 2.65e-25 107
MS.gene34824.t1 MTR_1g108820 29.327 416 246 17 24 429 7 384 3.12e-25 107
MS.gene34824.t1 MTR_6g040270 26.056 426 244 15 23 429 6 379 1.51e-24 104
MS.gene34824.t1 MTR_7g026500 28.194 454 235 20 15 435 4 399 2.20e-24 104
MS.gene34824.t1 MTR_7g033915 27.358 424 224 18 23 430 9 364 6.60e-24 102
MS.gene34824.t1 MTR_3g099800 57.471 87 36 1 343 428 19 105 7.99e-24 95.9
MS.gene34824.t1 MTR_5g045170 27.021 433 253 15 15 430 4 390 2.72e-23 101
MS.gene34824.t1 MTR_3g108560 26.730 419 244 14 25 430 20 388 5.41e-23 100
MS.gene34824.t1 MTR_1g085120 27.209 430 266 17 12 431 79 471 9.32e-23 100
MS.gene34824.t1 MTR_7g034115 28.095 420 228 19 24 423 10 375 9.57e-23 99.8
MS.gene34824.t1 MTR_7g033990 26.128 421 243 16 22 425 8 377 1.09e-22 100
MS.gene34824.t1 MTR_1g085120 27.209 430 266 17 12 431 154 546 1.71e-22 100
MS.gene34824.t1 MTR_1g066830 26.415 424 259 15 20 430 3 386 2.34e-22 98.6
MS.gene34824.t1 MTR_7g056420 28.155 412 224 18 25 425 9 359 2.88e-22 100
MS.gene34824.t1 MTR_7g056430 28.155 412 224 18 25 425 9 359 3.36e-22 100
MS.gene34824.t1 MTR_3g087260 27.447 470 252 16 25 430 12 456 3.58e-22 99.0
MS.gene34824.t1 MTR_7g056447 37.778 180 105 6 25 200 9 185 4.86e-22 96.3
MS.gene34824.t1 MTR_6g022500 27.123 424 246 21 24 431 100 476 3.02e-21 96.3
MS.gene34824.t1 MTR_3g107120 27.483 433 240 16 25 432 9 392 7.73e-21 94.4
MS.gene34824.t1 MTR_3g107160 25.754 431 255 16 17 431 2 383 1.28e-20 93.6
MS.gene34824.t1 MTR_3g040700 25.000 384 216 13 22 390 40 366 1.59e-20 93.6
MS.gene34824.t1 MTR_7g032380 36.979 192 100 10 24 203 10 192 1.85e-20 92.8
MS.gene34824.t1 MTR_7g032380 33.333 174 102 6 269 431 186 356 2.95e-13 71.2
MS.gene34824.t1 MTR_7g056277 26.824 425 236 17 25 430 259 627 2.56e-20 94.0
MS.gene34824.t1 MTR_4g056040 27.273 451 239 14 23 399 7 442 5.42e-20 92.8
MS.gene34824.t1 MTR_7g115270 33.673 196 115 6 25 207 12 205 6.81e-20 91.7
MS.gene34824.t1 MTR_7g056287 26.588 425 237 17 25 430 3 371 7.40e-20 91.3
MS.gene34824.t1 MTR_6g011460 27.166 427 250 15 20 431 41 421 7.61e-20 91.7
MS.gene34824.t1 MTR_4g056030 27.069 447 266 15 18 423 2 429 1.14e-19 91.3
MS.gene34824.t1 MTR_0543s0010 24.818 411 257 16 25 430 86 449 1.15e-19 91.3
MS.gene34824.t1 MTR_2g008310 28.199 422 238 19 24 431 1 371 1.15e-19 90.9
MS.gene34824.t1 MTR_5g045510 33.953 215 132 7 19 227 6 216 2.31e-19 89.7
MS.gene34824.t1 MTR_5g007410 26.531 441 257 16 6 428 14 405 2.50e-19 90.1
MS.gene34824.t1 MTR_2g008320 27.578 446 239 21 12 431 40 427 3.66e-19 89.7
MS.gene34824.t1 MTR_0009s0080 27.040 429 257 15 1 417 2 386 4.84e-19 89.4
MS.gene34824.t1 MTR_4g056020 32.692 208 127 6 25 222 9 213 2.16e-18 87.4
MS.gene34824.t1 MTR_8g085430 34.021 194 110 8 24 203 10 199 4.37e-18 85.5
MS.gene34824.t1 MTR_4g134150 36.957 184 101 8 25 203 14 187 5.70e-18 83.2
MS.gene34824.t1 MTR_7g007080 29.680 438 222 25 23 432 2 381 6.71e-18 85.5
MS.gene34824.t1 MTR_4g024720 38.415 164 64 9 25 155 17 176 6.83e-18 82.4
MS.gene34824.t1 MTR_8g014230 45.238 84 44 2 341 424 17 98 1.02e-17 78.6
MS.gene34824.t1 MTR_3g071850 26.190 420 255 15 21 423 20 401 1.06e-17 86.3
MS.gene34824.t1 MTR_7g114710 25.837 418 235 14 24 431 12 364 2.68e-17 83.6
MS.gene34824.t1 MTR_7g034110 30.882 204 119 7 24 209 10 209 3.59e-17 82.8
MS.gene34824.t1 MTR_6g045333 25.000 440 269 16 11 430 47 445 3.67e-17 83.6
MS.gene34824.t1 MTR_1g053025 24.429 438 246 15 24 428 1 386 8.82e-17 82.0
MS.gene34824.t1 MTR_7g088260 35.233 193 113 8 19 205 85 271 1.39e-16 82.0
MS.gene34824.t1 MTR_5g058000 35.602 191 109 9 20 202 3 187 2.25e-16 80.9
MS.gene34824.t1 MTR_3g099830 26.402 428 227 18 24 429 11 372 2.70e-16 80.5
MS.gene34824.t1 MTR_3g108560 33.152 184 112 7 25 205 20 195 3.43e-16 79.3
MS.gene34824.t1 MTR_3g109982 32.787 183 118 3 25 205 13 192 3.58e-16 81.3
MS.gene34824.t1 MTR_3g110010 32.787 183 118 3 25 205 13 192 3.66e-16 81.3
MS.gene34824.t1 MTR_4g056070 31.225 253 117 8 25 225 9 256 4.37e-16 80.5
MS.gene34824.t1 MTR_4g098590 27.273 396 222 17 27 398 1 354 5.85e-16 79.3
MS.gene34824.t1 MTR_5g083890 26.024 415 226 17 25 401 6 377 7.43e-16 80.1
MS.gene34824.t1 MTR_5g061680 35.533 197 112 10 16 202 2 193 9.09e-16 78.6
MS.gene34824.t1 MTR_7g075820 25.000 436 247 20 25 429 6 392 1.99e-15 78.2
MS.gene34824.t1 MTR_1g038710 31.579 209 126 7 8 202 2 207 2.67e-15 78.2
MS.gene34824.t1 MTR_5g073370 28.141 398 223 19 25 409 5 352 3.11e-15 77.4
MS.gene34824.t1 MTR_1g108820 34.946 186 112 6 24 205 7 187 3.26e-15 77.0
MS.gene34824.t1 MTR_3g105060 31.720 186 115 7 24 202 13 193 3.31e-15 77.0
MS.gene34824.t1 MTR_3g467400 30.500 200 115 9 25 203 3 199 5.55e-15 76.6
MS.gene34824.t1 MTR_3g467400 40.789 76 45 0 357 432 293 368 5.14e-11 64.3
MS.gene34824.t1 MTR_0492s0020 23.747 379 237 16 25 398 86 417 1.02e-14 76.3
MS.gene34824.t1 MTR_4g055990 30.667 225 106 7 25 202 9 230 1.81e-14 75.5
MS.gene34824.t1 MTR_4g055990 30.667 225 106 7 25 202 9 230 2.14e-14 75.5
MS.gene34824.t1 MTR_7g033945 37.143 175 93 8 23 186 9 177 5.25e-14 70.5
MS.gene34824.t1 MTR_7g084080 37.908 153 82 6 10 157 2 146 5.45e-14 72.8
MS.gene34824.t1 MTR_5g065100 26.714 423 223 16 19 430 2 348 6.24e-14 73.6
MS.gene34824.t1 MTR_6g044572 30.736 231 119 9 24 218 1 226 7.42e-14 73.2
MS.gene34824.t1 MTR_6g044560 29.150 247 134 9 8 218 161 402 9.93e-14 73.6
MS.gene34824.t1 MTR_3g026920 25.386 453 236 20 22 433 16 407 1.06e-13 72.8
MS.gene34824.t1 MTR_5g058100 31.937 191 119 7 19 202 3 189 2.02e-13 72.0
MS.gene34824.t1 MTR_1g014450 25.000 428 268 18 8 404 1 406 2.14e-13 72.0
MS.gene34824.t1 MTR_2g005990 26.852 432 247 20 24 429 5 393 2.41e-13 71.6
MS.gene34824.t1 MTR_6g018660 36.066 183 87 9 21 181 16 190 3.04e-13 71.2
MS.gene34824.t1 MTR_7g033940 40.351 114 62 5 27 137 96 206 8.75e-13 67.8
MS.gene34824.t1 MTR_2g100590 29.146 199 123 7 24 206 41 237 8.93e-13 70.1
MS.gene34824.t1 MTR_2g100590 29.146 199 123 7 24 206 41 237 9.52e-13 70.1
MS.gene34824.t1 MTR_4g093690 28.000 275 164 14 12 268 5 263 9.65e-13 68.6
MS.gene34824.t1 MTR_5g060570 32.237 152 95 5 10 158 2 148 1.02e-12 68.2
MS.gene34824.t1 MTR_1g016310 32.579 221 125 10 7 211 4 216 1.10e-12 69.3
MS.gene34824.t1 MTR_3g082890 31.217 189 116 7 25 205 97 279 1.38e-12 69.7
MS.gene34824.t1 MTR_2g100590 29.146 199 123 7 24 206 41 237 1.39e-12 70.1
MS.gene34824.t1 MTR_3g082890 31.217 189 116 7 25 205 17 199 1.62e-12 69.3
MS.gene34824.t1 MTR_1g016310 32.579 221 125 10 7 211 4 216 1.68e-12 69.3
MS.gene34824.t1 MTR_3g115430 35.135 111 66 3 322 431 20 125 1.73e-12 64.7
MS.gene34824.t1 MTR_5g040850 26.932 427 220 22 22 398 4 388 4.76e-12 67.8
MS.gene34824.t1 MTR_2g047848 26.730 419 236 21 23 398 5 395 6.52e-12 67.4
MS.gene34824.t1 MTR_1g095750 44.048 84 44 3 24 106 45 126 6.79e-12 63.5
MS.gene34824.t1 MTR_3g023270 32.335 167 99 5 23 184 10 167 1.02e-11 66.2
MS.gene34824.t1 MTR_1g085120 30.500 200 125 8 12 202 166 360 1.21e-11 66.6
MS.gene34824.t1 MTR_6g025160 30.000 220 133 8 25 233 101 310 2.47e-11 65.5
MS.gene34824.t1 MTR_7g021630 27.673 318 187 13 25 311 17 322 3.29e-11 65.1
MS.gene34824.t1 MTR_7g021630 27.673 318 187 13 25 311 17 322 3.36e-11 64.7
MS.gene34824.t1 MTR_1g107385 32.843 204 110 9 25 204 32 232 3.50e-11 65.1
MS.gene34824.t1 MTR_3g095640 31.138 167 98 8 20 173 13 175 4.90e-11 61.6
MS.gene34824.t1 MTR_2g020170 34.211 114 69 2 25 134 22 133 5.44e-11 60.8
MS.gene34824.t1 MTR_4g024770 60.870 46 17 1 25 70 24 68 6.97e-11 58.5
MS.gene34824.t1 MTR_3g095600 29.612 206 111 9 24 218 3 185 8.27e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34824.t1 AT4G10400 29.048 420 273 12 24 430 1 408 1.09e-29 119
MS.gene34824.t1 AT4G10400 29.048 420 273 12 24 430 1 408 1.09e-29 119
MS.gene34824.t1 AT4G10400 29.048 420 273 12 24 430 1 408 1.09e-29 119
MS.gene34824.t1 AT1G32375 28.281 442 263 17 24 431 1 422 8.93e-26 108
MS.gene34824.t1 AT1G32375 28.281 442 263 17 24 431 1 422 8.93e-26 108
MS.gene34824.t1 AT5G56420 27.660 423 284 14 25 431 6 422 2.21e-25 107
MS.gene34824.t1 AT5G56420 27.660 423 284 14 25 431 6 422 2.21e-25 107
MS.gene34824.t1 AT5G56420 27.660 423 284 14 25 431 6 422 2.21e-25 107
MS.gene34824.t1 AT5G56370 27.679 448 255 16 24 430 1 420 1.39e-24 105
MS.gene34824.t1 AT5G56370 27.679 448 255 16 24 430 1 420 1.39e-24 105
MS.gene34824.t1 AT1G78750 26.190 462 269 23 20 428 13 455 2.13e-24 105
MS.gene34824.t1 AT1G78750 26.190 462 269 23 20 428 13 455 2.13e-24 105
MS.gene34824.t1 AT5G38590 26.118 425 258 13 24 416 1 401 1.08e-23 102
MS.gene34824.t1 AT1G78760 25.785 446 274 19 22 428 13 440 3.33e-22 99.0
MS.gene34824.t1 AT2G26030 26.991 452 270 20 25 428 4 443 1.53e-21 97.1
MS.gene34824.t1 AT3G52680 29.638 442 267 18 25 435 21 449 2.34e-21 96.3
MS.gene34824.t1 AT1G66290 24.838 463 283 23 9 428 10 450 2.87e-21 96.3
MS.gene34824.t1 AT5G53840 26.407 462 270 21 10 428 3 437 7.67e-21 94.7
MS.gene34824.t1 AT4G13965 26.636 428 283 14 20 428 5 420 8.19e-21 94.4
MS.gene34824.t1 AT5G56560 28.409 440 260 21 23 431 3 418 9.59e-21 94.4
MS.gene34824.t1 AT5G22610 24.312 436 278 14 25 428 18 433 1.24e-20 94.4
MS.gene34824.t1 AT1G16930 27.119 472 262 22 15 431 5 449 2.32e-20 93.6
MS.gene34824.t1 AT1G16930 27.119 472 262 22 15 431 5 449 2.32e-20 93.6
MS.gene34824.t1 AT1G16930 27.119 472 262 22 15 431 5 449 2.32e-20 93.6
MS.gene34824.t1 AT5G38570 26.087 437 237 15 24 433 1 378 3.00e-20 92.4
MS.gene34824.t1 AT4G09920 36.559 186 111 5 24 204 1 184 3.86e-20 91.3
MS.gene34824.t1 AT4G09920 36.559 186 111 5 24 204 1 184 3.86e-20 91.3
MS.gene34824.t1 AT4G09920 36.559 186 111 5 24 204 1 184 3.86e-20 90.5
MS.gene34824.t1 AT4G09920 36.559 186 111 5 24 204 1 184 3.86e-20 90.5
MS.gene34824.t1 AT4G09920 36.559 186 111 5 24 204 1 184 3.86e-20 90.5
MS.gene34824.t1 AT2G26030 26.889 450 268 20 25 428 4 438 3.88e-20 92.8
MS.gene34824.t1 AT2G26030 26.889 450 268 20 25 428 4 438 3.88e-20 92.8
MS.gene34824.t1 AT1G69630 27.133 457 264 21 20 428 13 448 6.68e-20 92.0
MS.gene34824.t1 AT3G60040 32.159 227 119 7 25 222 13 233 1.86e-19 91.3
MS.gene34824.t1 AT3G59200 34.031 191 109 6 25 202 7 193 2.20e-19 89.7
MS.gene34824.t1 AT3G60040 32.159 227 119 7 25 222 230 450 2.50e-19 91.3
MS.gene34824.t1 AT3G60040 32.159 227 119 7 25 222 232 452 2.60e-19 91.3
MS.gene34824.t1 AT3G60040 32.159 227 119 7 25 222 232 452 2.62e-19 90.9
MS.gene34824.t1 AT3G60040 32.159 227 119 7 25 222 233 453 2.74e-19 91.3
MS.gene34824.t1 AT3G42770 27.356 435 260 16 27 423 1 417 2.92e-19 90.5
MS.gene34824.t1 AT1G66310 27.252 444 264 21 23 428 17 439 6.19e-19 89.0
MS.gene34824.t1 AT3G59200 34.031 191 109 6 25 202 7 193 6.75e-19 89.4
MS.gene34824.t1 AT4G26340 26.244 442 269 15 24 431 1 419 9.90e-19 88.2
MS.gene34824.t1 AT5G38590 32.308 195 113 5 24 208 1 186 1.68e-18 85.9
MS.gene34824.t1 AT5G50270 27.059 425 258 17 24 413 1 408 2.09e-18 87.0
MS.gene34824.t1 AT5G44950 26.329 414 260 17 25 401 4 409 2.66e-18 87.0
MS.gene34824.t1 AT5G22720 24.440 491 283 20 5 432 1 466 6.66e-18 86.3
MS.gene34824.t1 AT5G22610 22.961 466 277 15 25 428 18 463 9.02e-18 85.9
MS.gene34824.t1 AT5G56400 25.110 454 301 17 4 431 15 455 2.78e-17 84.3
MS.gene34824.t1 AT2G26860 27.970 404 238 15 24 390 1 388 6.25e-17 82.8
MS.gene34824.t1 AT2G26860 27.970 404 238 15 24 390 1 388 6.25e-17 82.8
MS.gene34824.t1 AT3G59190 34.359 195 106 9 25 202 12 201 6.29e-17 82.4
MS.gene34824.t1 AT3G59190 33.846 195 107 8 25 202 12 201 7.55e-17 83.2
MS.gene34824.t1 AT3G44060 26.712 438 271 17 30 432 4 426 9.47e-17 82.4
MS.gene34824.t1 AT1G51370 24.169 451 291 18 5 426 2 430 1.01e-16 82.4
MS.gene34824.t1 AT3G58920 26.875 480 267 18 24 430 1 469 1.12e-16 82.4
MS.gene34824.t1 AT5G22670 25.180 417 262 16 16 394 2 406 1.64e-16 81.6
MS.gene34824.t1 AT1G13570 26.328 433 281 18 21 433 2 416 5.90e-16 79.7
MS.gene34824.t1 AT1G13570 26.328 433 281 18 21 433 2 416 5.90e-16 79.7
MS.gene34824.t1 AT5G56440 35.676 185 110 7 24 202 1 182 6.98e-16 79.7
MS.gene34824.t1 AT3G59240 30.570 193 119 6 25 205 8 197 1.16e-15 79.3
MS.gene34824.t1 AT5G53635 25.503 447 267 18 27 430 2 425 1.73e-15 78.6
MS.gene34824.t1 AT2G42720 30.366 191 120 6 24 202 1 190 2.03e-15 78.6
MS.gene34824.t1 AT5G53640 30.583 206 122 7 8 204 5 198 2.04e-15 75.5
MS.gene34824.t1 AT5G62970 24.786 468 271 15 24 430 1 448 3.04e-15 77.8
MS.gene34824.t1 AT2G29930 33.333 186 107 8 25 202 12 188 7.21e-15 76.6
MS.gene34824.t1 AT2G29930 33.333 186 107 8 25 202 12 188 7.21e-15 76.6
MS.gene34824.t1 AT1G48400 32.275 189 114 5 25 202 10 195 9.21e-15 76.6
MS.gene34824.t1 AT1G48400 32.275 189 114 5 25 202 10 195 9.72e-15 76.6
MS.gene34824.t1 AT5G22660 26.049 453 266 19 25 429 13 444 1.07e-14 76.3
MS.gene34824.t1 AT3G59210 32.984 191 115 5 25 204 7 195 1.80e-14 75.5
MS.gene34824.t1 AT3G59210 32.984 191 115 5 25 204 7 195 1.80e-14 75.5
MS.gene34824.t1 AT3G59210 32.984 191 115 5 25 204 7 195 1.80e-14 75.5
MS.gene34824.t1 AT3G59210 32.984 191 115 5 25 204 7 195 1.80e-14 75.5
MS.gene34824.t1 AT3G59210 32.984 191 115 5 25 204 7 195 1.80e-14 75.5
MS.gene34824.t1 AT1G06630 29.907 214 132 7 25 222 12 223 1.97e-14 74.3
MS.gene34824.t1 AT1G06630 29.907 214 132 7 25 222 12 223 2.63e-14 74.3
MS.gene34824.t1 AT1G06630 29.907 214 132 7 25 222 12 223 2.63e-14 74.3
MS.gene34824.t1 AT5G41840 28.704 216 125 9 9 202 2 210 2.84e-14 75.1
MS.gene34824.t1 AT1G06630 26.966 356 215 15 25 344 12 358 2.92e-14 74.7
MS.gene34824.t1 AT1G06630 26.966 356 215 15 25 344 12 358 2.92e-14 74.7
MS.gene34824.t1 AT1G06630 26.966 356 215 15 25 344 12 358 2.92e-14 74.7
MS.gene34824.t1 AT1G06630 26.966 356 215 15 25 344 12 358 2.92e-14 74.7
MS.gene34824.t1 AT3G26922 26.599 297 188 9 19 296 8 293 2.95e-14 73.6
MS.gene34824.t1 AT3G26922 26.599 297 188 9 19 296 8 293 2.95e-14 73.6
MS.gene34824.t1 AT1G06630 26.966 356 215 15 25 344 21 367 3.55e-14 74.3
MS.gene34824.t1 AT4G00160 27.232 448 272 21 25 435 16 446 3.66e-14 74.7
MS.gene34824.t1 AT5G50270 31.633 196 117 6 24 208 1 190 3.86e-14 73.2
MS.gene34824.t1 AT5G22700 25.886 367 220 15 25 372 43 376 4.01e-14 74.3
MS.gene34824.t1 AT1G06630 27.221 349 209 15 25 337 12 351 4.45e-14 74.3
MS.gene34824.t1 AT3G49030 24.945 453 300 19 5 430 1 440 1.19e-13 72.8
MS.gene34824.t1 AT4G13960 35.323 201 105 9 24 208 1 192 1.23e-13 73.2
MS.gene34824.t1 AT4G13960 35.323 201 105 9 24 208 1 192 1.23e-13 73.2
MS.gene34824.t1 AT4G14103 33.163 196 108 8 25 205 8 195 1.53e-13 72.4
MS.gene34824.t1 AT4G14103 33.163 196 108 8 25 205 8 195 1.53e-13 72.4
MS.gene34824.t1 AT4G14103 33.663 202 108 9 25 211 8 198 1.54e-13 72.8
MS.gene34824.t1 AT3G54910 27.540 374 240 13 76 431 13 373 2.06e-13 71.6
MS.gene34824.t1 AT3G54910 27.540 374 240 13 76 431 13 373 2.06e-13 71.6
MS.gene34824.t1 AT3G54910 27.540 374 240 13 76 431 13 373 2.06e-13 71.6
MS.gene34824.t1 AT5G56410 25.416 421 257 16 24 398 1 410 2.80e-13 72.0
MS.gene34824.t1 AT3G52680 32.620 187 115 5 25 204 21 203 2.91e-13 71.2
MS.gene34824.t1 AT5G22700 32.620 187 111 7 25 204 6 184 3.39e-13 71.6
MS.gene34824.t1 AT5G22700 32.620 187 111 7 25 204 6 184 3.39e-13 71.6
MS.gene34824.t1 AT5G22700 32.620 187 111 7 25 204 6 184 3.39e-13 71.6
MS.gene34824.t1 AT5G22700 32.620 187 111 7 25 204 6 184 3.39e-13 71.6
MS.gene34824.t1 AT5G02920 30.319 188 120 5 25 210 28 206 3.81e-13 69.7
MS.gene34824.t1 AT5G22700 32.620 187 111 7 25 204 43 221 4.01e-13 71.6
MS.gene34824.t1 AT1G55660 32.812 192 110 10 24 202 52 237 6.14e-13 70.5
MS.gene34824.t1 AT5G38390 36.649 191 99 11 24 205 1 178 7.41e-13 70.5
MS.gene34824.t1 AT5G56560 30.052 193 129 6 23 212 3 192 9.23e-13 70.5
MS.gene34824.t1 AT1G55660 32.812 192 110 10 24 202 52 237 9.76e-13 70.5
MS.gene34824.t1 AT1G51370 24.103 390 252 15 5 368 2 373 1.20e-12 69.7
MS.gene34824.t1 AT3G58940 31.674 221 119 11 24 219 1 214 1.49e-12 70.1
MS.gene34824.t1 AT3G58940 31.674 221 119 11 24 219 1 214 1.49e-12 70.1
MS.gene34824.t1 AT1G13570 30.045 223 140 9 21 235 2 216 4.62e-12 67.0
MS.gene34824.t1 AT3G26930 26.764 411 260 17 51 432 1 399 7.73e-12 67.0
MS.gene34824.t1 AT1G55030 24.198 405 268 16 8 389 2 390 9.36e-12 67.0
MS.gene34824.t1 AT1G21990 32.432 185 114 7 25 202 9 189 9.87e-12 67.0
MS.gene34824.t1 AT3G49030 24.270 445 287 17 5 430 1 414 1.05e-11 67.0
MS.gene34824.t1 AT3G59230 25.104 482 272 22 25 433 12 477 1.06e-11 67.0
MS.gene34824.t1 AT3G59160 28.505 214 112 8 25 202 13 221 1.26e-11 66.6
MS.gene34824.t1 AT5G38590 30.282 142 83 3 24 157 1 134 1.40e-11 65.5
MS.gene34824.t1 AT1G55030 24.745 392 256 16 21 389 5 380 1.62e-11 66.2
MS.gene34824.t1 AT5G03100 29.767 215 137 8 20 231 4 207 1.84e-11 65.5
MS.gene34824.t1 AT5G03100 29.767 215 137 8 20 231 4 207 1.84e-11 65.5
MS.gene34824.t1 AT3G58880 30.653 199 122 6 24 209 2 197 2.08e-11 65.9
MS.gene34824.t1 AT3G58930 29.091 220 125 9 24 219 1 213 2.70e-11 65.9
MS.gene34824.t1 AT3G58930 29.091 220 125 9 24 219 1 213 2.70e-11 65.9
MS.gene34824.t1 AT3G58930 29.091 220 125 9 24 219 1 213 2.70e-11 65.9
MS.gene34824.t1 AT4G00320 28.283 198 120 7 25 202 13 208 2.90e-11 65.9
MS.gene34824.t1 AT5G02930 27.751 209 134 8 4 205 4 202 3.64e-11 65.5
MS.gene34824.t1 AT1G58310 31.132 212 114 9 21 204 4 211 3.91e-11 65.5
MS.gene34824.t1 AT3G59170 29.646 226 111 12 25 211 7 223 6.14e-11 64.7
MS.gene34824.t1 AT1G19070 40.476 84 47 2 24 105 1 83 9.41e-11 58.5

Find 105 sgRNAs with CRISPR-Local

Find 142 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATGAGCCGTTTGTCTTCT+AGG 0.168133 8.3:-40102684 MS.gene34824:CDS
TATTGATTATGAGAACTTTA+AGG 0.213840 8.3:+40101587 None:intergenic
TGTTCTAAATCGCGAAATTC+TGG 0.261819 8.3:+40101676 None:intergenic
TTCGTATTCACGAAATTTAC+AGG 0.269966 8.3:+40102522 None:intergenic
GACTGCTCAATCTGTCCATC+TGG 0.287385 8.3:+40102767 None:intergenic
TTTGCGTAACGGACTTGTTT+TGG 0.295622 8.3:-40101303 MS.gene34824:CDS
TGGAAACTTTGCAGTCTATC+TGG 0.303116 8.3:-40102212 MS.gene34824:intron
ACCTTCAAATCTTCTAGCTT+GGG 0.313538 8.3:+40102077 None:intergenic
CAGAATATTTGAGTTAAAAC+AGG 0.317327 8.3:+40101636 None:intergenic
GGCTACAGATTGGGCATTGC+AGG 0.324307 8.3:-40101951 MS.gene34824:CDS
CTGAAGTATATTTGCATAGA+AGG 0.331495 8.3:-40101368 MS.gene34824:CDS
TTTGAAGGTCATTGAGAATA+GGG 0.335744 8.3:+40101862 None:intergenic
CACGAAATTTACAGGTGAAA+TGG 0.341384 8.3:+40102530 None:intergenic
AATTCTGGATAATTTATAAC+AGG 0.349762 8.3:+40101691 None:intergenic
AACAAATTCACTTTGACAAT+AGG 0.361112 8.3:+40101887 None:intergenic
CCACCTGTGGAAGGATCTTC+AGG 0.363048 8.3:-40102656 MS.gene34824:CDS
ATACATGCAGTGGCCACTTC+AGG 0.378400 8.3:-40101716 MS.gene34824:intron
GACGCAGATGGGTCTCCTTA+AGG 0.385602 8.3:-40101170 None:intergenic
TTAATAGTTGCCTTTCTCTC+TGG 0.385645 8.3:-40102104 MS.gene34824:CDS
TGGTCCTGGTGGCTACAGAT+TGG 0.386642 8.3:-40101961 MS.gene34824:CDS
CTTCTATGCAAATATACTTC+AGG 0.390562 8.3:+40101369 None:intergenic
CCCCAAGCTAGAAGATTTGA+AGG 0.392530 8.3:-40102078 MS.gene34824:CDS
AACCTTCAAATCTTCTAGCT+TGG 0.392889 8.3:+40102076 None:intergenic
TGCAGGCAACTTTCACACTA+TGG 0.398879 8.3:-40101934 MS.gene34824:CDS
GGTCCTGGTGGCTACAGATT+GGG 0.408891 8.3:-40101960 MS.gene34824:CDS
GTCGTAACGGACGTTATTGT+TGG 0.432085 8.3:+40102706 None:intergenic
GGTGTATTTCAACAACCTCT+TGG 0.433361 8.3:+40102010 None:intergenic
TCCGTTACGCAAAATAAATT+CGG 0.437038 8.3:+40101313 None:intergenic
GTCCGTGCTGCCATTGGCCC+CGG 0.445560 8.3:-40102478 MS.gene34824:CDS
CAACTTAACTTTGACGCAGA+TGG 0.463590 8.3:-40101182 MS.gene34824:CDS
AGTCCAAGTGAAATTATCAT+TGG 0.470068 8.3:+40101989 None:intergenic
CTTGGGGCAGCCAGAGAGAA+AGG 0.473234 8.3:+40102094 None:intergenic
AACTTAACTTTGACGCAGAT+GGG 0.474068 8.3:-40101181 MS.gene34824:CDS
TTCTTCAAGGCCGGGGCCAA+TGG 0.477825 8.3:+40102468 None:intergenic
GAGATCAAGTTCTTCAAGGC+CGG 0.487882 8.3:+40102459 None:intergenic
AGGTGGGATATGAGACATCT+AGG 0.488525 8.3:+40101389 None:intergenic
AAACACATCTTCTTCAGTGA+TGG 0.494181 8.3:+40102149 None:intergenic
ATTTGCATAGAAGGATATCA+AGG 0.494802 8.3:-40101359 MS.gene34824:CDS
AGATCAAGTTCTTCAAGGCC+GGG 0.495433 8.3:+40102460 None:intergenic
TGTCGAGATCAAGTTCTTCA+AGG 0.495760 8.3:+40102455 None:intergenic
TTGTGTGGATGGAATCAGTT+TGG 0.501307 8.3:-40102051 MS.gene34824:CDS
GAATGTGGCGCGATCTGCGG+AGG 0.501492 8.3:+40102560 None:intergenic
TTTCAACAACCTCTTGGAGC+TGG 0.503440 8.3:+40102016 None:intergenic
GGACGTTATTGTTGGGAGGA+AGG 0.509138 8.3:+40102714 None:intergenic
GCCTTCCACTTCGACAACCT+TGG 0.511811 8.3:-40102634 MS.gene34824:CDS
CTTCTAGGTGGCGCCACCTG+TGG 0.513852 8.3:-40102669 MS.gene34824:CDS
TTGAAGGTTAATTGTGTGGA+TGG 0.515453 8.3:-40102062 MS.gene34824:CDS
GCGTCTCAGATAGCTTCAAA+AGG 0.515776 8.3:-40102612 MS.gene34824:CDS
AAGTCGAATGTATTGAAATG+TGG 0.522652 8.3:-40102501 MS.gene34824:CDS
GGCGCCACCTAGAAGACAAA+CGG 0.523348 8.3:+40102677 None:intergenic
CATCTGCGTCAAAGTTAAGT+TGG 0.527648 8.3:+40101183 None:intergenic
GCAACAACCTCGTTTCCCTC+AGG 0.532637 8.3:-40102387 MS.gene34824:intron
ATGTGGGTCCGTGCTGCCAT+TGG 0.533953 8.3:-40102484 MS.gene34824:CDS
TCGTAACGGACGTTATTGTT+GGG 0.536686 8.3:+40102707 None:intergenic
GCTTGCACGGCGACGACAAG+TGG 0.537318 8.3:-40102796 MS.gene34824:CDS
CTAGGAACAGTTGTTGATTG+TGG 0.543151 8.3:+40101407 None:intergenic
GTTGTTGCAGCTCATGAAGA+AGG 0.544005 8.3:+40102402 None:intergenic
CTATGCAAATATACTTCAGG+TGG 0.545118 8.3:+40101372 None:intergenic
TAGGTGGCGCCACCTGTGGA+AGG 0.550311 8.3:-40102665 MS.gene34824:CDS
CCTTCAAATCTTCTAGCTTG+GGG 0.553838 8.3:+40102078 None:intergenic
ACTGCTCAATCTGTCCATCT+GGG 0.561303 8.3:+40102768 None:intergenic
GGACAGATTGAGCAGTCTAC+CGG 0.562892 8.3:-40102761 MS.gene34824:CDS
CCTAGAAGACAAACGGCTCA+TGG 0.565898 8.3:+40102684 None:intergenic
GTTGATTGTGGCTCCCATGT+TGG 0.567503 8.3:+40101419 None:intergenic
GATCAAGTTCTTCAAGGCCG+GGG 0.568669 8.3:+40102461 None:intergenic
TGAAGCTATCTGAGACGCCA+AGG 0.574070 8.3:+40102617 None:intergenic
TTTATAACAGGAACCTGAAG+TGG 0.574467 8.3:+40101703 None:intergenic
GGCCGGGGCCAATGGCAGCA+CGG 0.575707 8.3:+40102476 None:intergenic
ACCATCATCTTTACCAACAT+GGG 0.576385 8.3:-40101432 MS.gene34824:CDS
AAGATTAACAAATATACCGA+GGG 0.582923 8.3:-40101219 MS.gene34824:CDS
ATATGACACAGAACTGAGTC+CGG 0.586329 8.3:+40102742 None:intergenic
TCCCATGTTGGTAAAGATGA+TGG 0.586785 8.3:+40101431 None:intergenic
ACACCAATGATAATTTCACT+TGG 0.587332 8.3:-40101992 MS.gene34824:CDS
AGACGCCAAGGTTGTCGAAG+TGG 0.587717 8.3:+40102629 None:intergenic
AACCATCATCTTTACCAACA+TGG 0.588791 8.3:-40101433 MS.gene34824:CDS
GACAAGTGGAGGCACCCAGA+TGG 0.590276 8.3:-40102782 MS.gene34824:CDS
TCTATCTGGTGAATTCAAAA+CGG 0.592646 8.3:-40102198 MS.gene34824:CDS
AGGCCTGAAGATCCTTCCAC+AGG 0.594911 8.3:+40102653 None:intergenic
ATGCCCAATCTGTAGCCACC+AGG 0.596978 8.3:+40101957 None:intergenic
AGTCGAATGTATTGAAATGT+GGG 0.597640 8.3:-40102500 MS.gene34824:CDS
TTTGAATGTGGCGCGATCTG+CGG 0.599793 8.3:+40102557 None:intergenic
GTCACGTCATTCAACATCAA+AGG 0.600319 8.3:-40101814 MS.gene34824:intron
AGATTTGAAGGTTAATTGTG+TGG 0.601491 8.3:-40102066 MS.gene34824:CDS
GCCAAGGTTGTCGAAGTGGA+AGG 0.603187 8.3:+40102633 None:intergenic
TGCACGGCGACGACAAGTGG+AGG 0.607534 8.3:-40102793 MS.gene34824:CDS
TCATGAAGAAGGAAGGAGGT+AGG 0.611485 8.3:+40102413 None:intergenic
CCTGAAGATCCTTCCACAGG+TGG 0.612455 8.3:+40102656 None:intergenic
TTGCAGCTCATGAAGAAGGA+AGG 0.613912 8.3:+40102406 None:intergenic
AAGAAAACGAAAAGCTTGCA+CGG 0.629248 8.3:-40102809 MS.gene34824:CDS
AATGTGGCGCGATCTGCGGA+GGG 0.630677 8.3:+40102561 None:intergenic
TAAATTACCTGAGGGAAACG+AGG 0.631468 8.3:+40102380 None:intergenic
AAAGATTAACAAATATACCG+AGG 0.643261 8.3:-40101220 MS.gene34824:CDS
AAGCTTTCTCCAGCTCCAAG+AGG 0.646864 8.3:-40102025 MS.gene34824:CDS
TGGCATGTCACAGATCCCCT+CGG 0.652232 8.3:+40101203 None:intergenic
TAACGGACGTTATTGTTGGG+AGG 0.653327 8.3:+40102710 None:intergenic
CAGCTCATGAAGAAGGAAGG+AGG 0.657786 8.3:+40102409 None:intergenic
ATCTGGTGAATTCAAAACGG+AGG 0.658150 8.3:-40102195 MS.gene34824:CDS
CAAACGGCTCATGGTCGTAA+CGG 0.659939 8.3:+40102693 None:intergenic
AGAATATTTGAGTTAAAACA+GGG 0.665389 8.3:+40101637 None:intergenic
TATGCAAATATACTTCAGGT+GGG 0.673254 8.3:+40101373 None:intergenic
TCTCATAATCAATAGCCACA+AGG 0.678177 8.3:-40101578 MS.gene34824:intron
AGGCAACTTTCACACTATGG+CGG 0.690913 8.3:-40101931 MS.gene34824:CDS
TGAGCCGTTTGTCTTCTAGG+TGG 0.697856 8.3:-40102681 MS.gene34824:CDS
GATGTGTTTAAACAGCACAG+TGG 0.743179 8.3:-40102135 MS.gene34824:CDS
AGATTAACAAATATACCGAG+GGG 0.744560 8.3:-40101218 MS.gene34824:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTTTATATATAAATATAGTT+TGG - chr8.3:40102231-40102250 MS.gene34824:intron 10.0%
!!! AAATTAGTTTAAAGAAGAAT+TGG + chr8.3:40101708-40101727 None:intergenic 15.0%
!!! AATTAGTTTAAAGAAGAATT+GGG + chr8.3:40101707-40101726 None:intergenic 15.0%
!! AATTCTGGATAATTTATAAC+AGG + chr8.3:40102316-40102335 None:intergenic 20.0%
!! GTTTAAATTAAATTACCTGA+GGG + chr8.3:40101635-40101654 None:intergenic 20.0%
!!! AGAATATTTGAGTTAAAACA+GGG + chr8.3:40102370-40102389 None:intergenic 20.0%
!!! ATTAGTTTAAAGAAGAATTG+GGG + chr8.3:40101706-40101725 None:intergenic 20.0%
!!! ATTCATTATCATCATTTTGA+AGG + chr8.3:40102160-40102179 None:intergenic 20.0%
!!! TAATTTTAATCCTACGAAAT+TGG - chr8.3:40101722-40101741 MS.gene34824:intron 20.0%
!!! TATTGATTATGAGAACTTTA+AGG + chr8.3:40102420-40102439 None:intergenic 20.0%
!!! TTGTTAATCTTTTGATAGAA+CGG + chr8.3:40102776-40102795 None:intergenic 20.0%
! AAAGATTAACAAATATACCG+AGG - chr8.3:40102784-40102803 MS.gene34824:CDS 25.0%
! AACAAATTCACTTTGACAAT+AGG + chr8.3:40102120-40102139 None:intergenic 25.0%
! AAGATTAACAAATATACCGA+GGG - chr8.3:40102785-40102804 MS.gene34824:CDS 25.0%
! AGTTTATTTGAATCCATCTT+TGG - chr8.3:40102466-40102485 MS.gene34824:CDS 25.0%
! ATTGATATTGTGATATTAGC+TGG + chr8.3:40101657-40101676 None:intergenic 25.0%
! GGTTTAAATTAAATTACCTG+AGG + chr8.3:40101636-40101655 None:intergenic 25.0%
! TCGAAAATATATGTGGTTTA+CGG + chr8.3:40102521-40102540 None:intergenic 25.0%
!! CAGAATATTTGAGTTAAAAC+AGG + chr8.3:40102371-40102390 None:intergenic 25.0%
!!! CTGTTTTAACTCAAATATTC+TGG - chr8.3:40102369-40102388 MS.gene34824:intron 25.0%
!!! TATTTTTGTTGACATTTCAC+TGG - chr8.3:40102734-40102753 MS.gene34824:CDS 25.0%
AAGTCGAATGTATTGAAATG+TGG - chr8.3:40101503-40101522 MS.gene34824:intron 30.0%
ACACCAATGATAATTTCACT+TGG - chr8.3:40102012-40102031 MS.gene34824:CDS 30.0%
AGATGACTCGAAAATATATG+TGG + chr8.3:40102528-40102547 None:intergenic 30.0%
AGATTAACAAATATACCGAG+GGG - chr8.3:40102786-40102805 MS.gene34824:CDS 30.0%
AGATTTGAAGGTTAATTGTG+TGG - chr8.3:40101938-40101957 MS.gene34824:CDS 30.0%
AGTCCAAGTGAAATTATCAT+TGG + chr8.3:40102018-40102037 None:intergenic 30.0%
AGTCGAATGTATTGAAATGT+GGG - chr8.3:40101504-40101523 MS.gene34824:intron 30.0%
ATTTGCATAGAAGGATATCA+AGG - chr8.3:40102645-40102664 MS.gene34824:CDS 30.0%
CTGAAGTATATTTGCATAGA+AGG - chr8.3:40102636-40102655 MS.gene34824:CDS 30.0%
CTTCTATGCAAATATACTTC+AGG + chr8.3:40102638-40102657 None:intergenic 30.0%
TATGCAAATATACTTCAGGT+GGG + chr8.3:40102634-40102653 None:intergenic 30.0%
TCCGTTACGCAAAATAAATT+CGG + chr8.3:40102694-40102713 None:intergenic 30.0%
TCTATCTGGTGAATTCAAAA+CGG - chr8.3:40101806-40101825 MS.gene34824:intron 30.0%
TTCGTATTCACGAAATTTAC+AGG + chr8.3:40101485-40101504 None:intergenic 30.0%
TTTGAAGGTCATTGAGAATA+GGG + chr8.3:40102145-40102164 None:intergenic 30.0%
! AATTTCACTTGGACTTTTCT+TGG - chr8.3:40102023-40102042 MS.gene34824:CDS 30.0%
! AGCTTTTCGTTTTCTTTTAG+AGG + chr8.3:40101191-40101210 None:intergenic 30.0%
! ATGTTGTATAACCTGTCTTT+TGG - chr8.3:40101772-40101791 MS.gene34824:intron 30.0%
! TGAAATGGAACTTTTGAATG+TGG + chr8.3:40101462-40101481 None:intergenic 30.0%
!! TTTCTTTTAGAGGCTAACTT+GGG + chr8.3:40101181-40101200 None:intergenic 30.0%
!! TTTTCTTTTAGAGGCTAACT+TGG + chr8.3:40101182-40101201 None:intergenic 30.0%
!! TTTTGAAGGTCATTGAGAAT+AGG + chr8.3:40102146-40102165 None:intergenic 30.0%
AAACACATCTTCTTCAGTGA+TGG + chr8.3:40101858-40101877 None:intergenic 35.0%
AACCATCATCTTTACCAACA+TGG - chr8.3:40102571-40102590 MS.gene34824:CDS 35.0%
AACTTAACTTTGACGCAGAT+GGG - chr8.3:40102823-40102842 MS.gene34824:CDS 35.0%
AAGAAAACGAAAAGCTTGCA+CGG - chr8.3:40101195-40101214 MS.gene34824:CDS 35.0%
ACCATCATCTTTACCAACAT+GGG - chr8.3:40102572-40102591 MS.gene34824:CDS 35.0%
ATACATAGACAGACCAAAGA+TGG + chr8.3:40102482-40102501 None:intergenic 35.0%
CACGAAATTTACAGGTGAAA+TGG + chr8.3:40101477-40101496 None:intergenic 35.0%
CATGAGTTTACCAATTTCGT+AGG + chr8.3:40101735-40101754 None:intergenic 35.0%
CTACGAAATTGGTAAACTCA+TGG - chr8.3:40101733-40101752 MS.gene34824:intron 35.0%
CTATGCAAATATACTTCAGG+TGG + chr8.3:40102635-40102654 None:intergenic 35.0%
TATACAATGATGGCAAGTGA+TGG + chr8.3:40102271-40102290 None:intergenic 35.0%
TCTCATAATCAATAGCCACA+AGG - chr8.3:40102426-40102445 MS.gene34824:CDS 35.0%
TTAATAGTTGCCTTTCTCTC+TGG - chr8.3:40101900-40101919 MS.gene34824:CDS 35.0%
TTGAAGGTTAATTGTGTGGA+TGG - chr8.3:40101942-40101961 MS.gene34824:CDS 35.0%
TTTATAACAGGAACCTGAAG+TGG + chr8.3:40102304-40102323 None:intergenic 35.0%
! AACCTTCAAATCTTCTAGCT+TGG + chr8.3:40101931-40101950 None:intergenic 35.0%
! TGTTCTAAATCGCGAAATTC+TGG + chr8.3:40102331-40102350 None:intergenic 35.0%
!! ACCTTCAAATCTTCTAGCTT+GGG + chr8.3:40101930-40101949 None:intergenic 35.0%
!!! GCCGAATTTATTTTGCGTAA+CGG - chr8.3:40102690-40102709 MS.gene34824:CDS 35.0%
ATATGACACAGAACTGAGTC+CGG + chr8.3:40101265-40101284 None:intergenic 40.0%
ATCTGGTGAATTCAAAACGG+AGG - chr8.3:40101809-40101828 MS.gene34824:intron 40.0%
CAACTTAACTTTGACGCAGA+TGG - chr8.3:40102822-40102841 MS.gene34824:CDS 40.0%
CATCTGCGTCAAAGTTAAGT+TGG + chr8.3:40102824-40102843 None:intergenic 40.0%
CCACTGCATGTATACAATGA+TGG + chr8.3:40102281-40102300 None:intergenic 40.0%
CCATCATTGTATACATGCAG+TGG - chr8.3:40102278-40102297 MS.gene34824:intron 40.0%
CGAAATTGGTAAACTCATGG+TGG - chr8.3:40101736-40101755 MS.gene34824:intron 40.0%
CTGCAAAGTTTCCAAAAGAC+AGG + chr8.3:40101786-40101805 None:intergenic 40.0%
GATGTGTTTAAACAGCACAG+TGG - chr8.3:40101869-40101888 MS.gene34824:CDS 40.0%
GGTGTATTTCAACAACCTCT+TGG + chr8.3:40101997-40102016 None:intergenic 40.0%
GTCACGTCATTCAACATCAA+AGG - chr8.3:40102190-40102209 MS.gene34824:CDS 40.0%
GTCATCTTGTTCCATGTTAC+TGG - chr8.3:40102541-40102560 MS.gene34824:CDS 40.0%
TAAATTACCTGAGGGAAACG+AGG + chr8.3:40101627-40101646 None:intergenic 40.0%
TCTTGTTCCATGTTACTGGT+AGG - chr8.3:40102545-40102564 MS.gene34824:CDS 40.0%
TGGAAACTTTGCAGTCTATC+TGG - chr8.3:40101792-40101811 MS.gene34824:intron 40.0%
TGTCGAGATCAAGTTCTTCA+AGG + chr8.3:40101552-40101571 None:intergenic 40.0%
TTGTGTGGATGGAATCAGTT+TGG - chr8.3:40101953-40101972 MS.gene34824:CDS 40.0%
! AGAAGTGTGAACAAACCTTG+TGG + chr8.3:40102444-40102463 None:intergenic 40.0%
! CTAGGAACAGTTGTTGATTG+TGG + chr8.3:40102600-40102619 None:intergenic 40.0%
! TCCCATGTTGGTAAAGATGA+TGG + chr8.3:40102576-40102595 None:intergenic 40.0%
!! CCTTCAAATCTTCTAGCTTG+GGG + chr8.3:40101929-40101948 None:intergenic 40.0%
!! TCGTAACGGACGTTATTGTT+GGG + chr8.3:40101300-40101319 None:intergenic 40.0%
!!! TTTGCGTAACGGACTTGTTT+TGG - chr8.3:40102701-40102720 MS.gene34824:CDS 40.0%
ACTGCTCAATCTGTCCATCT+GGG + chr8.3:40101239-40101258 None:intergenic 45.0%
AGATCAAGTTCTTCAAGGCC+GGG + chr8.3:40101547-40101566 None:intergenic 45.0%
AGGCAACTTTCACACTATGG+CGG - chr8.3:40102073-40102092 MS.gene34824:CDS 45.0%
AGGTGGGATATGAGACATCT+AGG + chr8.3:40102618-40102637 None:intergenic 45.0%
CCCCAAGCTAGAAGATTTGA+AGG - chr8.3:40101926-40101945 MS.gene34824:CDS 45.0%
GAGATCAAGTTCTTCAAGGC+CGG + chr8.3:40101548-40101567 None:intergenic 45.0%
GCGTCTCAGATAGCTTCAAA+AGG - chr8.3:40101392-40101411 MS.gene34824:CDS 45.0%
GTTGTTGCAGCTCATGAAGA+AGG + chr8.3:40101605-40101624 None:intergenic 45.0%
TCATGAAGAAGGAAGGAGGT+AGG + chr8.3:40101594-40101613 None:intergenic 45.0%
TGCAGGCAACTTTCACACTA+TGG - chr8.3:40102070-40102089 MS.gene34824:CDS 45.0%
TGTTCCATGTTACTGGTAGG+AGG - chr8.3:40102548-40102567 MS.gene34824:CDS 45.0%
TTGCAGCTCATGAAGAAGGA+AGG + chr8.3:40101601-40101620 None:intergenic 45.0%
TTTCAACAACCTCTTGGAGC+TGG + chr8.3:40101991-40102010 None:intergenic 45.0%
! ACTTGGACTTTTCTTGGTCC+TGG - chr8.3:40102029-40102048 MS.gene34824:CDS 45.0%
! TAACGGACGTTATTGTTGGG+AGG + chr8.3:40101297-40101316 None:intergenic 45.0%
!! GTCGTAACGGACGTTATTGT+TGG + chr8.3:40101301-40101320 None:intergenic 45.0%
AAGCTTTCTCCAGCTCCAAG+AGG - chr8.3:40101979-40101998 MS.gene34824:CDS 50.0%
ATACATGCAGTGGCCACTTC+AGG - chr8.3:40102288-40102307 MS.gene34824:intron 50.0%
CAAACGGCTCATGGTCGTAA+CGG + chr8.3:40101314-40101333 None:intergenic 50.0%
CAGCTCATGAAGAAGGAAGG+AGG + chr8.3:40101598-40101617 None:intergenic 50.0%
CCATGAGCCGTTTGTCTTCT+AGG - chr8.3:40101320-40101339 MS.gene34824:CDS 50.0%
CCTAGAAGACAAACGGCTCA+TGG + chr8.3:40101323-40101342 None:intergenic 50.0%
GACTGCTCAATCTGTCCATC+TGG + chr8.3:40101240-40101259 None:intergenic 50.0%
GATCAAGTTCTTCAAGGCCG+GGG + chr8.3:40101546-40101565 None:intergenic 50.0%
GGACAGATTGAGCAGTCTAC+CGG - chr8.3:40101243-40101262 MS.gene34824:CDS 50.0%
GGACGTTATTGTTGGGAGGA+AGG + chr8.3:40101293-40101312 None:intergenic 50.0%
GGTTCCTCCTACCAGTAACA+TGG + chr8.3:40102555-40102574 None:intergenic 50.0%
GTTGATTGTGGCTCCCATGT+TGG + chr8.3:40102588-40102607 None:intergenic 50.0%
TGAGCCGTTTGTCTTCTAGG+TGG - chr8.3:40101323-40101342 MS.gene34824:CDS 50.0%
TTTGAATGTGGCGCGATCTG+CGG + chr8.3:40101450-40101469 None:intergenic 50.0%
! TGAAGCTATCTGAGACGCCA+AGG + chr8.3:40101390-40101409 None:intergenic 50.0%
! TGGACTTTTCTTGGTCCTGG+TGG - chr8.3:40102032-40102051 MS.gene34824:CDS 50.0%
AGACGCCAAGGTTGTCGAAG+TGG + chr8.3:40101378-40101397 None:intergenic 55.0%
AGGCCTGAAGATCCTTCCAC+AGG + chr8.3:40101354-40101373 None:intergenic 55.0%
ATGCCCAATCTGTAGCCACC+AGG + chr8.3:40102050-40102069 None:intergenic 55.0%
CCACCTGTGGAAGGATCTTC+AGG - chr8.3:40101348-40101367 MS.gene34824:CDS 55.0%
CCTGAAGATCCTTCCACAGG+TGG + chr8.3:40101351-40101370 None:intergenic 55.0%
GCAACAACCTCGTTTCCCTC+AGG - chr8.3:40101617-40101636 MS.gene34824:CDS 55.0%
GCCAAGGTTGTCGAAGTGGA+AGG + chr8.3:40101374-40101393 None:intergenic 55.0%
GCCTTCCACTTCGACAACCT+TGG - chr8.3:40101370-40101389 MS.gene34824:CDS 55.0%
GGCGCCACCTAGAAGACAAA+CGG + chr8.3:40101330-40101349 None:intergenic 55.0%
GGTCCTGGTGGCTACAGATT+GGG - chr8.3:40102044-40102063 MS.gene34824:CDS 55.0%
TGGCATGTCACAGATCCCCT+CGG + chr8.3:40102804-40102823 None:intergenic 55.0%
TGGTCCTGGTGGCTACAGAT+TGG - chr8.3:40102043-40102062 MS.gene34824:CDS 55.0%
! GGCTACAGATTGGGCATTGC+AGG - chr8.3:40102053-40102072 MS.gene34824:CDS 55.0%
AATGTGGCGCGATCTGCGGA+GGG + chr8.3:40101446-40101465 None:intergenic 60.0%
ATGTGGGTCCGTGCTGCCAT+TGG - chr8.3:40101520-40101539 MS.gene34824:intron 60.0%
CTTGGGGCAGCCAGAGAGAA+AGG + chr8.3:40101913-40101932 None:intergenic 60.0%
TTCTTCAAGGCCGGGGCCAA+TGG + chr8.3:40101539-40101558 None:intergenic 60.0%
!! GACAAGTGGAGGCACCCAGA+TGG - chr8.3:40101222-40101241 MS.gene34824:CDS 60.0%
CTTCTAGGTGGCGCCACCTG+TGG - chr8.3:40101335-40101354 MS.gene34824:CDS 65.0%
GAATGTGGCGCGATCTGCGG+AGG + chr8.3:40101447-40101466 None:intergenic 65.0%
GCTTGCACGGCGACGACAAG+TGG - chr8.3:40101208-40101227 MS.gene34824:CDS 65.0%
TAGGTGGCGCCACCTGTGGA+AGG - chr8.3:40101339-40101358 MS.gene34824:CDS 65.0%
TGCACGGCGACGACAAGTGG+AGG - chr8.3:40101211-40101230 MS.gene34824:CDS 65.0%
GTCCGTGCTGCCATTGGCCC+CGG - chr8.3:40101526-40101545 MS.gene34824:intron 70.0%
GGCCGGGGCCAATGGCAGCA+CGG + chr8.3:40101531-40101550 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 40101172 40102854 40101172 ID=MS.gene34824
chr8.3 mRNA 40101172 40102854 40101172 ID=MS.gene34824.t1;Parent=MS.gene34824
chr8.3 exon 40102388 40102854 40102388 ID=MS.gene34824.t1.exon1;Parent=MS.gene34824.t1
chr8.3 CDS 40102388 40102854 40102388 ID=cds.MS.gene34824.t1;Parent=MS.gene34824.t1
chr8.3 exon 40101815 40102220 40101815 ID=MS.gene34824.t1.exon2;Parent=MS.gene34824.t1
chr8.3 CDS 40101815 40102220 40101815 ID=cds.MS.gene34824.t1;Parent=MS.gene34824.t1
chr8.3 exon 40101579 40101728 40101579 ID=MS.gene34824.t1.exon3;Parent=MS.gene34824.t1
chr8.3 CDS 40101579 40101728 40101579 ID=cds.MS.gene34824.t1;Parent=MS.gene34824.t1
chr8.3 exon 40101172 40101459 40101172 ID=MS.gene34824.t1.exon4;Parent=MS.gene34824.t1
chr8.3 CDS 40101172 40101459 40101172 ID=cds.MS.gene34824.t1;Parent=MS.gene34824.t1
Gene Sequence

>MS.gene34824

ATGGCGCCCAAGTTAGCCTCTAAAAGAAAACGAAAAGCTTGCACGGCGACGACAAGTGGAGGCACCCAGATGGACAGATTGAGCAGTCTACCGGACTCAGTTCTGTGTCATATCATGTCCTTCCTCCCAACAATAACGTCCGTTACGACCATGAGCCGTTTGTCTTCTAGGTGGCGCCACCTGTGGAAGGATCTTCAGGCCTTCCACTTCGACAACCTTGGCGTCTCAGATAGCTTCAAAAGGTTTGCATTTTTTGTGAACGCTGTGCTTGCCCTCCGCAGATCGCGCCACATTCAAAAGTTCCATTTCACCTGTAAATTTCGTGAATACGAAGTCGAATGTATTGAAATGTGGGTCCGTGCTGCCATTGGCCCCGGCCTTGAAGAACTTGATCTCGACATCTATGAAGCTGACATAAACCTACCTCCTTCCTTCTTCATGAGCTGCAACAACCTCGTTTCCCTCAGGTAATTTAATTTAAACCAGCTAATATCACAATATCAATACAAATTAATTAGTATTTATTACTAACCCCAATTCTTCTTTAAACTAATTTTAATCCTACGAAATTGGTAAACTCATGGTGGAAACAAAACTAGAATGTTGTATAACCTGTCTTTTGGAAACTTTGCAGTCTATCTGGTGAATTCAAAACGGAGGTTAAACATTCTTTAGTGCAATTTCCATCACTGAAGAAGATGTGTTTAAACAGCACAGTGGATTCAGATTTAATAGTTGCCTTTCTCTCTGGCTGCCCCAAGCTAGAAGATTTGAAGGTTAATTGTGTGGATGGAATCAGTTTGGCTAAAGCTTTCTCCAGCTCCAAGAGGTTGTTGAAATACACCAATGATAATTTCACTTGGACTTTTCTTGGTCCTGGTGGCTACAGATTGGGCATTGCAGGCAACTTTCACACTATGGCGGAAGCATTTCTTGATGTCTTCTCCTATTGTCAAAGTGAATTTGTTGACCCTATTCTCAATGACCTTCAAAATGATGATAATGAATTATATCTAGTGTCACGTCATTCAACATCAAAGGTGAAGATTTATTTTTATGCTTTATATATAAATATAGTTTGGTACTAATTTTATTTCCATCACTTGCCATCATTGTATACATGCAGTGGCCACTTCAGGTTCCTGTTATAAATTATCCAGAATTTCGCGATTTAGAACATCTAAAGTTCACTCTTCCCTGTTTTAACTCAAATATTCTGGTCAACGTGCTTGAGAAATGTCATGACCTTAAAGTTCTCATAATCAATAGCCACAAGGTTTGTTCACACTTCTCAAGTTTATTTGAATCCATCTTTGGTCTGTCTATGTATGCATGTATGTATCAATCCGTAAACCACATATATTTTCGAGTCATCTTGTTCCATGTTACTGGTAGGAGGAACCATCATCTTTACCAACATGGGAGCCACAATCAACAACTGTTCCTAGATGTCTCATATCCCACCTGAAGTATATTTGCATAGAAGGATATCAAGGATTTGAAGACGAGCTGACATTTGCCGAATTTATTTTGCGTAACGGACTTGTTTTGGAGACAATGCTTATTTTTGTTGACATTTCACTGGACATAACAAACAAGTACCGTTCTATCAAAAGATTAACAAATATACCGAGGGGATCTGTGACATGCCAACTTAACTTTGACGCAGATGGGTCTCCTTAA

Protein sequence

>MS.gene34824.t1

MAPKLASKRKRKACTATTSGGTQMDRLSSLPDSVLCHIMSFLPTITSVTTMSRLSSRWRHLWKDLQAFHFDNLGVSDSFKRFAFFVNAVLALRRSRHIQKFHFTCKFREYEVECIEMWVRAAIGPGLEELDLDIYEADINLPPSFFMSCNNLVSLSLSGEFKTEVKHSLVQFPSLKKMCLNSTVDSDLIVAFLSGCPKLEDLKVNCVDGISLAKAFSSSKRLLKYTNDNFTWTFLGPGGYRLGIAGNFHTMAEAFLDVFSYCQSEFVDPILNDLQNDDNELYLVSRHSTSKWPLQVPVINYPEFRDLEHLKFTLPCFNSNILVNVLEKCHDLKVLIINSHKEEPSSLPTWEPQSTTVPRCLISHLKYICIEGYQGFEDELTFAEFILRNGLVLETMLIFVDISLDITNKYRSIKRLTNIPRGSVTCQLNFDADGSP