AlfalfaGEDB | MS.gene042714

M. sativa cultivar XinJiangDaYe / MS.gene042714

KEGG: -
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene042714.t1	XP_013443027.1	99.5	421	2	0	1	421	1	421	3.70E-242	847

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene042714.t1	Q9FZ70	55.2	415	180	5	7	419	5	415	8.3e-118	425.2

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene042714.t1	A0A072TI09	99.5	421	2	0	1	421	1	421	2.6e-242	847.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene34703	MS.gene042714	PPI
MS.gene63177	MS.gene042714	PPI
MS.gene25449	MS.gene042714	PPI
MS.gene017193	MS.gene042714	PPI
MS.gene34801	MS.gene042714	PPI
MS.gene63095	MS.gene042714	PPI
MS.gene72955	MS.gene042714	PPI
MS.gene63104	MS.gene042714	PPI
MS.gene043123	MS.gene042714	PPI
MS.gene63113	MS.gene042714	PPI
MS.gene34707	MS.gene042714	PPI
MS.gene72956	MS.gene042714	PPI
MS.gene34736	MS.gene042714	PPI
MS.gene63218	MS.gene042714	PPI
MS.gene93027	MS.gene042714	PPI
MS.gene25298	MS.gene042714	PPI
MS.gene053311	MS.gene042714	PPI
MS.gene34215	MS.gene042714	PPI
MS.gene062537	MS.gene042714	PPI
MS.gene34804	MS.gene042714	PPI
MS.gene25347	MS.gene042714	PPI
MS.gene48656	MS.gene042714	PPI
MS.gene63213	MS.gene042714	PPI
MS.gene63223	MS.gene042714	PPI
MS.gene34824	MS.gene042714	PPI
MS.gene63105	MS.gene042714	PPI
MS.gene64993	MS.gene042714	PPI
MS.gene72959	MS.gene042714	PPI
MS.gene34731	MS.gene042714	PPI
MS.gene062282	MS.gene042714	PPI
MS.gene36065	MS.gene042714	PPI
MS.gene007876	MS.gene042714	PPI
MS.gene25353	MS.gene042714	PPI
MS.gene065516	MS.gene042714	PPI
MS.gene25352	MS.gene042714	PPI
MS.gene34704	MS.gene042714	PPI
MS.gene34825	MS.gene042714	PPI
MS.gene92095	MS.gene042714	PPI
MS.gene25415	MS.gene042714	PPI
MS.gene48654	MS.gene042714	PPI
MS.gene032295	MS.gene042714	PPI
MS.gene067702	MS.gene042714	PPI
MS.gene63212	MS.gene042714	PPI
MS.gene36066	MS.gene042714	PPI
MS.gene055880	MS.gene042714	PPI
MS.gene25412	MS.gene042714	PPI
MS.gene25410	MS.gene042714	PPI
MS.gene25348	MS.gene042714	PPI
MS.gene63185	MS.gene042714	PPI
MS.gene63094	MS.gene042714	PPI
MS.gene038427	MS.gene042714	PPI
MS.gene63112	MS.gene042714	PPI
MS.gene72961	MS.gene042714	PPI
MS.gene34740	MS.gene042714	PPI
MS.gene64992	MS.gene042714	PPI
MS.gene043122	MS.gene042714	PPI
MS.gene72960	MS.gene042714	PPI
MS.gene63259	MS.gene042714	PPI
MS.gene25448	MS.gene042714	PPI
MS.gene25411	MS.gene042714	PPI
MS.gene25414	MS.gene042714	PPI
MS.gene34739	MS.gene042714	PPI
MS.gene053312	MS.gene042714	PPI
MS.gene25344	MS.gene042714	PPI
MS.gene25386	MS.gene042714	PPI
MS.gene065234	MS.gene042714	PPI
MS.gene95710	MS.gene042714	PPI
MS.gene34753	MS.gene042714	PPI
MS.gene34802	MS.gene042714	PPI
MS.gene61631	MS.gene042714	PPI
MS.gene34216	MS.gene042714	PPI
MS.gene34737	MS.gene042714	PPI
MS.gene060770	MS.gene042714	PPI
MS.gene66626	MS.gene042714	PPI
MS.gene64984	MS.gene042714	PPI
MS.gene72958	MS.gene042714	PPI
MS.gene99980	MS.gene042714	PPI
MS.gene055882	MS.gene042714	PPI
MS.gene63224	MS.gene042714	PPI
MS.gene63221	MS.gene042714	PPI
MS.gene007875	MS.gene042714	PPI
MS.gene99983	MS.gene042714	PPI
MS.gene25418	MS.gene042714	PPI
MS.gene63260	MS.gene042714	PPI
MS.gene63256	MS.gene042714	PPI
MS.gene72957	MS.gene042714	PPI
MS.gene25299	MS.gene042714	PPI
MS.gene63257	MS.gene042714	PPI
MS.gene060769	MS.gene042714	PPI
MS.gene63214	MS.gene042714	PPI
MS.gene63210	MS.gene042714	PPI
MS.gene63217	MS.gene042714	PPI
MS.gene032296	MS.gene042714	PPI
MS.gene36067	MS.gene042714	PPI
MS.gene25297	MS.gene042714	PPI
MS.gene34766	MS.gene042714	PPI
MS.gene63222	MS.gene042714	PPI
MS.gene72952	MS.gene042714	PPI
MS.gene060771	MS.gene042714	PPI
MS.gene061286	MS.gene042714	PPI
MS.gene34733	MS.gene042714	PPI
MS.gene34706	MS.gene042714	PPI
MS.gene72954	MS.gene042714	PPI
MS.gene053313	MS.gene042714	PPI
MS.gene99982	MS.gene042714	PPI
MS.gene72962	MS.gene042714	PPI
MS.gene64988	MS.gene042714	PPI
MS.gene25396	MS.gene042714	PPI
MS.gene63111	MS.gene042714	PPI
MS.gene073176	MS.gene042714	PPI
MS.gene25451	MS.gene042714	PPI
MS.gene49513	MS.gene042714	PPI
MS.gene34730	MS.gene042714	PPI
MS.gene69850	MS.gene042714	PPI
MS.gene64989	MS.gene042714	PPI
MS.gene055883	MS.gene042714	PPI
MS.gene062526	MS.gene042714	PPI
MS.gene25296	MS.gene042714	PPI
MS.gene055877	MS.gene042714	PPI
MS.gene25450	MS.gene042714	PPI
MS.gene34738	MS.gene042714	PPI
MS.gene72963	MS.gene042714	PPI
MS.gene056517	MS.gene042714	PPI
MS.gene34735	MS.gene042714	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene042714.t1	MTR_0049s0110	99.525	421	2	0	1	421	1	421	0.0	861
MS.gene042714.t1	MTR_0049s0110	99.688	321	1	0	1	321	1	321	0.0	654
MS.gene042714.t1	MTR_0049s0110	99.381	323	2	0	1	323	1	323	0.0	654
MS.gene042714.t1	MTR_0049s0110	100.000	268	0	0	1	268	1	268	0.0	550
MS.gene042714.t1	MTR_1g021825	39.808	417	239	7	7	418	16	425	2.96e-90	280
MS.gene042714.t1	MTR_1g021825	39.808	417	239	7	7	418	87	496	3.19e-89	279
MS.gene042714.t1	MTR_2g091145	36.643	423	248	10	8	417	21	436	2.24e-76	244
MS.gene042714.t1	MTR_2g047872	35.363	427	259	7	1	417	16	435	7.62e-76	243
MS.gene042714.t1	MTR_2g047858	35.566	433	237	9	7	415	114	528	5.26e-73	238
MS.gene042714.t1	MTR_1g013580	35.476	420	253	8	8	417	19	430	2.16e-72	234
MS.gene042714.t1	MTR_1g011400	37.264	424	248	9	7	418	6	423	8.86e-72	232
MS.gene042714.t1	MTR_5g040850	34.722	432	246	10	8	421	7	420	4.59e-70	227
MS.gene042714.t1	MTR_1g013840	34.651	430	257	10	7	421	55	475	3.10e-67	221
MS.gene042714.t1	MTR_4g057725	34.571	431	247	12	8	417	22	438	3.21e-67	221
MS.gene042714.t1	MTR_2g047848	34.266	429	259	9	8	421	7	427	5.99e-67	219
MS.gene042714.t1	MTR_1g011430	33.729	421	204	9	7	418	6	360	1.58e-66	216
MS.gene042714.t1	MTR_1g021820	35.167	418	250	8	7	417	27	430	1.32e-65	216
MS.gene042714.t1	MTR_1g014450	31.935	429	265	9	8	421	16	432	2.20e-63	210
MS.gene042714.t1	MTR_1g011410	40.367	327	187	5	7	326	314	639	2.42e-62	213
MS.gene042714.t1	MTR_1g011410	35.849	318	173	6	7	320	6	296	1.22e-51	184
MS.gene042714.t1	MTR_1g016340	34.722	432	251	12	7	417	14	435	3.78e-62	207
MS.gene042714.t1	MTR_1g016340	34.722	432	251	12	7	417	19	440	4.79e-62	207
MS.gene042714.t1	MTR_1g013560	31.840	424	270	9	8	418	19	436	1.69e-60	203
MS.gene042714.t1	MTR_1g016310	36.164	318	189	7	7	311	19	335	1.60e-52	179
MS.gene042714.t1	MTR_1g016310	35.849	318	190	7	7	311	19	335	6.80e-51	177
MS.gene042714.t1	MTR_1g013560	32.822	326	205	7	8	320	19	343	3.81e-48	168
MS.gene042714.t1	MTR_1g013610	34.056	323	186	6	8	320	7	312	2.20e-47	167
MS.gene042714.t1	MTR_5g038430	32.464	422	254	12	8	419	96	496	7.77e-45	162
MS.gene042714.t1	MTR_1g013630	40.201	199	111	2	8	198	39	237	2.38e-42	153
MS.gene042714.t1	MTR_1g028860	37.500	208	121	3	24	222	6	213	6.90e-40	144
MS.gene042714.t1	MTR_7g090750	30.575	435	261	13	8	421	11	425	7.10e-38	142
MS.gene042714.t1	MTR_0227s0010	35.659	258	134	4	8	261	15	244	1.03e-35	134
MS.gene042714.t1	MTR_2g047852	35.000	220	114	3	7	222	8	202	3.04e-35	129
MS.gene042714.t1	MTR_1g013280	29.211	380	206	13	60	421	11	345	1.31e-33	129
MS.gene042714.t1	MTR_8g095590	31.231	333	167	12	8	326	15	299	2.99e-26	110
MS.gene042714.t1	MTR_4g032845	33.036	224	129	9	8	215	3	221	7.79e-20	91.7
MS.gene042714.t1	MTR_7g098510	24.661	442	238	15	5	417	15	390	1.95e-19	89.7
MS.gene042714.t1	MTR_4g080787	24.342	456	274	18	8	414	19	452	6.73e-19	89.0
MS.gene042714.t1	MTR_5g039950	24.876	402	260	12	8	395	23	396	7.37e-19	88.6
MS.gene042714.t1	MTR_2g082800	27.239	268	159	6	6	241	25	288	4.91e-18	85.9
MS.gene042714.t1	MTR_2g082850	28.391	317	201	11	6	299	20	333	3.43e-17	83.2
MS.gene042714.t1	MTR_7g056433	24.826	431	249	15	8	417	12	388	4.05e-17	82.8
MS.gene042714.t1	MTR_3g048290	26.157	432	256	17	1	386	18	432	8.98e-17	82.4
MS.gene042714.t1	MTR_4g080773	23.362	458	279	20	8	414	19	455	1.11e-16	82.4
MS.gene042714.t1	MTR_4g080773	23.362	458	279	20	8	414	19	455	1.33e-16	82.0
MS.gene042714.t1	MTR_1g115245	29.577	213	134	5	6	211	24	227	3.74e-16	79.3
MS.gene042714.t1	MTR_1g013620	28.870	239	136	5	178	415	1	206	5.26e-16	77.0
MS.gene042714.t1	MTR_2g072530	24.178	426	259	16	8	391	13	416	9.41e-16	79.3
MS.gene042714.t1	MTR_4g080590	26.932	427	244	19	8	391	23	424	1.89e-15	78.2
MS.gene042714.t1	MTR_2g100570	29.907	214	129	6	8	210	72	275	5.98e-15	77.0
MS.gene042714.t1	MTR_4g045900	23.636	495	287	19	8	417	26	514	6.52e-15	77.0
MS.gene042714.t1	MTR_7g032380	23.614	415	242	13	8	417	11	355	6.73e-15	75.9
MS.gene042714.t1	MTR_2g100570	29.907	214	129	6	8	210	72	275	6.85e-15	76.6
MS.gene042714.t1	MTR_2g100570	30.556	216	125	7	8	210	72	275	9.32e-15	76.6
MS.gene042714.t1	MTR_5g007750	51.948	77	31	2	342	418	24	94	1.15e-14	69.7
MS.gene042714.t1	MTR_8g014160	23.678	435	256	19	8	417	41	424	1.30e-14	75.5
MS.gene042714.t1	MTR_8g015770	28.916	249	136	10	8	220	6	249	2.12e-14	75.5
MS.gene042714.t1	MTR_2g072240	22.807	456	257	16	8	412	10	421	2.88e-14	74.7
MS.gene042714.t1	MTR_7g098570	24.105	419	251	17	8	411	20	386	3.60e-14	74.7
MS.gene042714.t1	MTR_1g041245	23.278	421	266	14	8	417	11	385	9.05e-14	72.8
MS.gene042714.t1	MTR_8g062270	27.891	294	169	11	6	258	14	305	1.39e-13	72.8
MS.gene042714.t1	MTR_7g056447	30.303	198	123	7	8	196	9	200	1.99e-13	70.9
MS.gene042714.t1	MTR_3g105060	24.038	416	253	17	8	417	14	372	3.58e-13	70.9
MS.gene042714.t1	MTR_4g080590	31.401	207	131	7	8	208	23	224	4.14e-13	70.9
MS.gene042714.t1	MTR_2g100590	28.718	195	121	5	8	188	42	232	4.18e-13	70.9
MS.gene042714.t1	MTR_2g100590	28.718	195	121	5	8	188	42	232	4.49e-13	70.9
MS.gene042714.t1	MTR_2g100590	28.718	195	121	5	8	188	42	232	6.72e-13	70.9
MS.gene042714.t1	MTR_3g108560	23.294	425	257	16	8	418	20	389	7.12e-13	70.1
MS.gene042714.t1	MTR_5g005690	28.395	162	106	4	12	169	25	180	8.02e-13	70.5
MS.gene042714.t1	MTR_7g076570	22.098	448	295	12	6	418	46	474	8.38e-13	70.5
MS.gene042714.t1	MTR_7g023330	23.457	405	232	13	6	387	18	367	9.37e-13	69.7
MS.gene042714.t1	MTR_4g088845	23.697	422	246	14	13	388	24	415	1.65e-12	69.3
MS.gene042714.t1	MTR_7g094030	35.211	142	83	4	5	144	25	159	1.79e-12	69.3
MS.gene042714.t1	MTR_7g098480	23.202	431	262	17	5	420	15	391	2.33e-12	68.9
MS.gene042714.t1	MTR_7g023310	24.942	429	247	14	8	387	26	428	2.37e-12	68.9
MS.gene042714.t1	MTR_1g115250	31.188	202	121	7	6	192	30	228	2.38e-12	68.9
MS.gene042714.t1	MTR_7g034115	24.088	411	258	14	8	410	11	375	2.39e-12	68.6
MS.gene042714.t1	MTR_2g082860	44.000	75	40	1	2	76	21	93	3.29e-12	63.5
MS.gene042714.t1	MTR_7g088260	24.096	415	261	14	5	411	88	456	4.41e-12	68.2
MS.gene042714.t1	MTR_8g015830	30.288	208	119	9	8	190	8	214	5.60e-12	67.8
MS.gene042714.t1	MTR_8g015680	30.556	216	131	9	8	205	7	221	6.55e-12	67.8
MS.gene042714.t1	MTR_7g025650	29.565	230	136	10	8	212	19	247	9.33e-12	67.4
MS.gene042714.t1	MTR_8g015830	30.288	208	119	9	8	190	8	214	1.07e-11	67.0
MS.gene042714.t1	MTR_8g018340	31.336	217	114	10	8	199	6	212	1.63e-11	66.6
MS.gene042714.t1	MTR_2g072720	33.333	114	73	2	8	118	39	152	2.09e-11	65.9
MS.gene042714.t1	MTR_4g119700	30.702	228	130	10	8	210	6	230	4.18e-11	65.1
MS.gene042714.t1	MTR_6g013240	28.780	205	123	7	8	190	72	275	5.70e-11	64.7
MS.gene042714.t1	MTR_7g026500	27.753	227	149	5	8	224	14	235	6.32e-11	64.3
MS.gene042714.t1	MTR_2g082880	29.064	203	133	6	8	206	10	205	6.53e-11	64.3
MS.gene042714.t1	MTR_6g013380	28.780	205	123	7	8	190	67	270	6.71e-11	64.7
MS.gene042714.t1	MTR_3g023470	30.000	220	128	9	8	214	15	221	8.24e-11	63.5
MS.gene042714.t1	MTR_7g089620	29.665	209	120	5	9	190	20	228	9.02e-11	63.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene042714.t1	AT1G13570	59.135	416	164	5	6	419	4	415	3.07e-165	471
MS.gene042714.t1	AT1G13570	59.135	416	164	5	6	419	4	415	3.07e-165	471
MS.gene042714.t1	AT1G13570	66.038	265	87	2	6	268	4	267	9.05e-116	340
MS.gene042714.t1	AT4G10400	26.005	423	284	14	8	417	2	408	7.59e-23	100
MS.gene042714.t1	AT4G10400	26.005	423	284	14	8	417	2	408	7.59e-23	100
MS.gene042714.t1	AT4G10400	26.005	423	284	14	8	417	2	408	7.59e-23	100
MS.gene042714.t1	AT5G56420	26.376	436	275	16	8	417	6	421	2.65e-22	98.6
MS.gene042714.t1	AT5G56420	26.376	436	275	16	8	417	6	421	2.65e-22	98.6
MS.gene042714.t1	AT5G56420	26.376	436	275	16	8	417	6	421	2.65e-22	98.6
MS.gene042714.t1	AT4G14103	33.891	239	144	7	3	228	2	239	3.93e-22	97.8
MS.gene042714.t1	AT4G14103	33.891	239	144	7	3	228	2	239	3.93e-22	97.8
MS.gene042714.t1	AT4G14103	33.891	239	144	7	3	228	2	239	4.10e-22	98.2
MS.gene042714.t1	AT4G14096	27.857	420	258	13	3	384	2	414	1.25e-21	97.1
MS.gene042714.t1	AT4G14096	27.857	420	258	13	3	384	2	414	1.25e-21	97.1
MS.gene042714.t1	AT5G22610	28.613	346	188	16	8	318	18	339	5.97e-20	92.0
MS.gene042714.t1	AT1G32375	24.717	441	280	18	8	417	2	421	9.42e-19	88.2
MS.gene042714.t1	AT1G32375	24.717	441	280	18	8	417	2	421	9.42e-19	88.2
MS.gene042714.t1	AT1G13780	27.548	363	204	15	6	318	8	361	1.19e-18	88.2
MS.gene042714.t1	AT1G13780	28.947	342	191	15	6	311	8	333	4.33e-18	85.1
MS.gene042714.t1	AT5G22730	34.715	193	107	8	5	188	25	207	5.98e-18	85.5
MS.gene042714.t1	AT5G22720	24.421	475	267	15	8	420	23	467	6.33e-18	85.9
MS.gene042714.t1	AT3G26922	29.845	258	138	11	8	230	14	263	9.59e-18	84.0
MS.gene042714.t1	AT3G26922	29.845	258	138	11	8	230	14	263	9.59e-18	84.0
MS.gene042714.t1	AT5G22730	34.715	193	107	8	5	188	25	207	1.18e-17	85.1
MS.gene042714.t1	AT5G22730	34.715	193	107	8	5	188	25	207	1.18e-17	85.1
MS.gene042714.t1	AT5G56370	23.991	446	276	15	8	417	2	420	1.32e-17	84.7
MS.gene042714.t1	AT5G56370	23.991	446	276	15	8	417	2	420	1.32e-17	84.7
MS.gene042714.t1	AT5G22610	33.838	198	113	8	8	194	18	208	1.72e-17	84.7
MS.gene042714.t1	AT3G59200	26.211	351	223	14	3	326	2	343	1.74e-17	84.0
MS.gene042714.t1	AT3G59200	26.211	351	223	14	3	326	2	343	3.93e-17	84.0
MS.gene042714.t1	AT5G02930	28.906	256	146	10	6	248	26	258	3.94e-17	83.6
MS.gene042714.t1	AT3G58880	27.791	421	256	16	8	386	3	417	5.25e-17	83.2
MS.gene042714.t1	AT5G38590	25.882	425	265	18	8	405	2	403	5.83e-17	82.8
MS.gene042714.t1	AT5G53840	24.503	453	270	17	5	415	15	437	1.89e-16	81.3
MS.gene042714.t1	AT3G52680	27.224	371	201	15	6	337	19	359	3.70e-16	80.1
MS.gene042714.t1	AT5G03100	27.925	265	148	9	6	245	7	253	1.28e-15	77.8
MS.gene042714.t1	AT5G03100	27.925	265	148	9	6	245	7	253	1.28e-15	77.8
MS.gene042714.t1	AT3G52680	27.654	358	190	15	6	324	19	346	1.28e-15	79.0
MS.gene042714.t1	AT4G13965	33.155	187	113	6	6	188	8	186	1.53e-15	78.6
MS.gene042714.t1	AT1G58310	27.575	301	179	10	1	269	1	294	1.99e-15	78.6
MS.gene042714.t1	AT5G56370	27.027	259	162	6	8	257	2	242	2.81e-15	76.6
MS.gene042714.t1	AT3G58940	24.939	409	269	12	8	386	2	402	2.83e-15	78.2
MS.gene042714.t1	AT3G58940	24.939	409	269	12	8	386	2	402	2.83e-15	78.2
MS.gene042714.t1	AT1G66310	23.707	464	255	17	8	415	19	439	4.17e-15	77.4
MS.gene042714.t1	AT4G27050	24.729	461	286	17	8	418	4	453	4.96e-15	77.0
MS.gene042714.t1	AT4G27050	24.729	461	286	17	8	418	4	453	4.96e-15	77.0
MS.gene042714.t1	AT4G27050	24.729	461	286	17	8	418	4	453	4.96e-15	77.0
MS.gene042714.t1	AT4G27050	24.729	461	286	17	8	418	4	453	4.96e-15	77.0
MS.gene042714.t1	AT4G27050	24.729	461	286	17	8	418	4	453	4.96e-15	77.0
MS.gene042714.t1	AT5G02910	25.926	432	259	14	2	391	5	417	1.03e-14	76.3
MS.gene042714.t1	AT3G59210	31.472	197	126	6	1	190	1	195	1.14e-14	76.3
MS.gene042714.t1	AT3G59210	31.472	197	126	6	1	190	1	195	1.14e-14	76.3
MS.gene042714.t1	AT3G59210	31.472	197	126	6	1	190	1	195	1.14e-14	76.3
MS.gene042714.t1	AT3G59210	31.472	197	126	6	1	190	1	195	1.14e-14	76.3
MS.gene042714.t1	AT3G59210	31.472	197	126	6	1	190	1	195	1.14e-14	76.3
MS.gene042714.t1	AT1G66300	24.835	455	271	22	8	418	29	456	1.43e-14	75.9
MS.gene042714.t1	AT1G67390	29.293	297	170	12	8	278	41	323	1.54e-14	75.9
MS.gene042714.t1	AT5G02910	26.420	352	208	9	2	320	5	338	1.68e-14	74.7
MS.gene042714.t1	AT5G02910	26.420	352	208	9	2	320	5	338	2.19e-14	74.7
MS.gene042714.t1	AT3G58860	22.819	447	288	18	8	411	7	439	3.16e-14	74.7
MS.gene042714.t1	AT1G80470	29.388	245	151	8	8	236	15	253	4.62e-14	74.3
MS.gene042714.t1	AT5G56690	24.725	364	228	12	10	342	4	352	5.64e-14	73.6
MS.gene042714.t1	AT4G00315	23.362	458	284	17	8	417	2	440	8.92e-14	73.2
MS.gene042714.t1	AT5G38590	27.969	261	163	9	8	258	2	247	9.94e-14	71.6
MS.gene042714.t1	AT3G49150	25.627	359	241	10	1	345	9	355	1.34e-13	72.8
MS.gene042714.t1	AT1G16930	28.000	250	147	11	6	236	13	248	1.69e-13	72.4
MS.gene042714.t1	AT1G16930	28.000	250	147	11	6	236	13	248	1.69e-13	72.4
MS.gene042714.t1	AT1G16930	28.000	250	147	11	6	236	13	248	1.69e-13	72.4
MS.gene042714.t1	AT4G00160	31.217	189	119	6	6	188	14	197	2.02e-13	72.0
MS.gene042714.t1	AT1G66290	30.151	199	115	8	2	190	21	205	2.31e-13	72.0
MS.gene042714.t1	AT2G04230	26.941	219	148	6	3	211	8	224	3.51e-13	71.2
MS.gene042714.t1	AT1G55660	24.138	464	273	20	8	417	53	491	3.65e-13	71.6
MS.gene042714.t1	AT1G51370	28.854	253	154	9	8	255	19	250	4.23e-13	70.5
MS.gene042714.t1	AT3G26922	28.631	241	129	11	25	230	2	234	4.89e-13	69.7
MS.gene042714.t1	AT3G26922	28.631	241	129	11	25	230	2	234	4.89e-13	69.7
MS.gene042714.t1	AT1G78750	24.594	431	251	20	8	386	18	426	5.03e-13	70.9
MS.gene042714.t1	AT1G78750	24.594	431	251	20	8	386	18	426	5.03e-13	70.9
MS.gene042714.t1	AT3G59160	26.259	278	162	8	3	238	8	284	5.20e-13	70.9
MS.gene042714.t1	AT3G03040	25.714	245	168	6	8	238	2	246	5.31e-13	70.9
MS.gene042714.t1	AT5G56440	25.054	467	254	20	8	417	2	429	6.44e-13	70.5
MS.gene042714.t1	AT5G56400	26.124	356	198	13	8	325	33	361	7.87e-13	70.5
MS.gene042714.t1	AT3G44060	24.146	439	279	18	13	415	4	424	8.06e-13	70.1
MS.gene042714.t1	AT5G38392	30.573	157	102	4	8	157	2	158	1.35e-12	67.4
MS.gene042714.t1	AT1G51370	28.854	253	154	9	8	255	19	250	1.41e-12	69.3
MS.gene042714.t1	AT1G51370	28.854	253	154	9	8	255	19	250	1.49e-12	69.3
MS.gene042714.t1	AT4G26340	23.928	443	278	17	8	417	2	418	2.01e-12	68.9
MS.gene042714.t1	AT2G42730	24.094	469	278	19	4	415	1	448	2.10e-12	68.9
MS.gene042714.t1	AT3G51530	26.023	342	210	15	4	320	26	349	2.14e-12	68.9
MS.gene042714.t1	AT5G02700	26.818	220	136	9	6	216	25	228	2.31e-12	68.9
MS.gene042714.t1	AT4G15060	25.496	353	220	12	1	320	19	361	3.66e-12	68.2
MS.gene042714.t1	AT4G09920	27.667	300	185	12	8	286	2	290	4.01e-12	67.0
MS.gene042714.t1	AT4G09920	27.667	300	185	12	8	286	2	290	4.01e-12	67.0
MS.gene042714.t1	AT4G09920	27.667	300	185	12	8	286	2	290	4.01e-12	67.0
MS.gene042714.t1	AT1G78760	22.078	462	275	18	5	415	13	440	4.46e-12	68.2
MS.gene042714.t1	AT2G26860	24.205	409	266	14	8	386	2	396	4.78e-12	67.8
MS.gene042714.t1	AT2G26860	24.205	409	266	14	8	386	2	396	4.78e-12	67.8
MS.gene042714.t1	AT4G09920	27.303	304	188	13	8	289	2	294	5.60e-12	67.0
MS.gene042714.t1	AT4G09920	27.303	304	188	13	8	289	2	294	5.60e-12	67.0
MS.gene042714.t1	AT4G13960	23.888	427	264	18	8	386	2	415	6.87e-12	67.4
MS.gene042714.t1	AT4G13960	23.888	427	264	18	8	386	2	415	6.87e-12	67.4
MS.gene042714.t1	AT3G58900	21.968	437	268	12	8	386	2	423	9.00e-12	67.0
MS.gene042714.t1	AT1G80960	29.146	199	131	6	2	190	5	203	1.00e-11	67.0
MS.gene042714.t1	AT1G21990	24.573	468	285	18	8	418	9	465	1.16e-11	66.6
MS.gene042714.t1	AT1G69630	22.976	457	277	17	8	415	18	448	1.28e-11	66.6
MS.gene042714.t1	AT5G44490	29.231	195	116	8	8	190	17	201	1.62e-11	66.2
MS.gene042714.t1	AT3G28410	27.149	221	134	10	6	216	26	229	1.97e-11	65.9
MS.gene042714.t1	AT5G44490	29.231	195	116	8	8	190	17	201	2.15e-11	65.9
MS.gene042714.t1	AT1G80960	29.534	193	126	6	8	190	50	242	2.37e-11	65.5
MS.gene042714.t1	AT1G80960	29.381	194	127	6	8	191	50	243	3.04e-11	65.5
MS.gene042714.t1	AT1G80960	29.381	194	127	6	8	191	50	243	3.04e-11	65.5
MS.gene042714.t1	AT1G80960	29.381	194	127	6	8	191	50	243	3.04e-11	65.5
MS.gene042714.t1	AT1G80960	29.381	194	127	6	8	191	50	243	3.40e-11	65.5
MS.gene042714.t1	AT3G59240	23.529	442	262	16	1	384	1	424	3.66e-11	65.5
MS.gene042714.t1	AT3G59230	29.442	197	125	6	6	188	9	205	3.90e-11	65.1
MS.gene042714.t1	AT3G58930	21.414	481	296	14	8	418	2	470	4.31e-11	65.1
MS.gene042714.t1	AT3G58930	21.414	481	296	14	8	418	2	470	4.31e-11	65.1
MS.gene042714.t1	AT3G58930	21.414	481	296	14	8	418	2	470	4.31e-11	65.1
MS.gene042714.t1	AT5G44950	26.316	190	129	4	6	190	2	185	9.94e-11	63.9

Find 70 sgRNAs with CRISPR-Local

Find 107 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTTCTAACAGCGTCTCTTAT+AGG	0.225951	5.2:-43353787	None:intergenic
CATTCCTGCTATGTATGATT+TGG	0.249434	5.2:+43355398	MS.gene042714:CDS
GAGAAATGATCTTAAAGATT+TGG	0.264764	5.2:+43354038	MS.gene042714:CDS
TATTTCAAGTTGCCCTCTAT+TGG	0.278991	5.2:+43354245	MS.gene042714:CDS
ATAAGGCTCTCAATCGCTTC+AGG	0.295190	5.2:-43354225	None:intergenic
TAAAGATTTGGATCTTGAAT+TGG	0.299254	5.2:+43354050	MS.gene042714:CDS
ACTTCTCGGTCGGTTGAGTT+AGG	0.307778	5.2:-43353883	None:intergenic
TTTGGATTGTCAATTGAAAA+TGG	0.313508	5.2:+43355416	MS.gene042714:CDS
TTTAAAAGAACTTCACATTT+CGG	0.333919	5.2:+43355072	MS.gene042714:CDS
ACAATTTGAAACTTATGAAT+TGG	0.341616	5.2:-43353961	None:intergenic
ATAGAGGGCAACTTGAAATA+AGG	0.361573	5.2:-43354242	None:intergenic
TGCCCTTCGGATTCTATACT+TGG	0.375493	5.2:+43355270	MS.gene042714:CDS
CCTTGTAGATACTCCACTCT+TGG	0.384226	5.2:+43354365	MS.gene042714:CDS
CTCAAGTACTTGTGTCTTGA+AGG	0.385929	5.2:+43354324	MS.gene042714:CDS
GCTTGGCTGTTCACCTATGC+TGG	0.392740	5.2:+43355362	MS.gene042714:CDS
AAAGATTTGGATCTTGAATT+GGG	0.397903	5.2:+43354051	MS.gene042714:CDS
AGACACAAGTACTTGAGGTT+TGG	0.401209	5.2:-43354318	None:intergenic
TATAGGAAGTTGTATCAAAA+TGG	0.403424	5.2:-43353770	None:intergenic
CCTAATCTCGAGAGACTTGT+TGG	0.425898	5.2:+43354474	MS.gene042714:CDS
CCAACAAGTCTCTCGAGATT+AGG	0.434633	5.2:-43354474	None:intergenic
GTGTCTTGAAGGCGAATTCA+AGG	0.439704	5.2:+43354335	MS.gene042714:CDS
CGCGTAAATGGAGGTACAAA+TGG	0.448573	5.2:+43353821	MS.gene042714:CDS
GCCCCGTATGCTGGATATGC+AGG	0.453033	5.2:+43355225	MS.gene042714:CDS
ATATCAAATGCCCCGTATGC+TGG	0.466471	5.2:+43355216	MS.gene042714:CDS
GTATGCTGGATATGCAGGTT+TGG	0.474840	5.2:+43355230	MS.gene042714:CDS
GGAAGGTCACTGATCAAATC+AGG	0.475175	5.2:-43353730	None:intergenic
CTTCTCGGTCGGTTGAGTTA+GGG	0.476681	5.2:-43353882	None:intergenic
AGCGATAAGTTCTCCAATAG+AGG	0.480239	5.2:-43354258	None:intergenic
TTGTGAGAAATTGACTCGAT+TGG	0.483936	5.2:+43354113	MS.gene042714:CDS
AGAATCCACTGATTTATAGC+AGG	0.495614	5.2:-43354006	None:intergenic
ATGGTCTCTATAATACTTTG+AGG	0.497744	5.2:-43353751	None:intergenic
CTTTAAGATCATTTCTCGAA+AGG	0.498052	5.2:-43354032	None:intergenic
TAAGGCTCTCAATCGCTTCA+GGG	0.510398	5.2:-43354224	None:intergenic
CTTGGTGAAGAAACAGCAAT+CGG	0.511283	5.2:-43353936	None:intergenic
GAAACTTATGAATTGGCCCT+TGG	0.516791	5.2:-43353954	None:intergenic
CCACTGATTTATAGCAGGGC+AGG	0.516941	5.2:-43354001	None:intergenic
CGATTGCTGTTTCTTCACCA+AGG	0.519504	5.2:+43353937	MS.gene042714:CDS
TTGGATCTTGAATTGGGAGA+AGG	0.523444	5.2:+43354057	MS.gene042714:CDS
AAACCTGCATATCCAGCATA+CGG	0.530137	5.2:-43355228	None:intergenic
GAAAATCCCTTAAAACTAGC+AGG	0.533034	5.2:-43354162	None:intergenic
AACCTGCATATCCAGCATAC+GGG	0.537365	5.2:-43355227	None:intergenic
TTCTTGAAGTATTTGAGCAT+AGG	0.544290	5.2:+43354926	MS.gene042714:intron
GAAAACAAGCTGAGTAATTG+TGG	0.547921	5.2:-43353845	None:intergenic
CAATCCAAATCATACATAGC+AGG	0.556247	5.2:-43355402	None:intergenic
ATACTCATTGTCTCCAGCAT+AGG	0.556521	5.2:-43355375	None:intergenic
GATTGCTGTTTCTTCACCAA+GGG	0.559561	5.2:+43353938	MS.gene042714:CDS
GAATCCACTGATTTATAGCA+GGG	0.572272	5.2:-43354005	None:intergenic
TTGGTGAAGAAACAGCAATC+GGG	0.572462	5.2:-43353935	None:intergenic
CCAAGAGTGGAGTATCTACA+AGG	0.572863	5.2:-43354365	None:intergenic
TTTCTGAACAACTTCTCGGT+CGG	0.579864	5.2:-43353893	None:intergenic
CTTCAAGACACAAGTACTTG+AGG	0.580159	5.2:-43354323	None:intergenic
CTCAAAATGTTTAATCTCCG+CGG	0.582387	5.2:-43355494	None:intergenic
TGAGCATAGGTAATGACCTA+GGG	0.584956	5.2:+43354939	MS.gene042714:CDS
ACGTTATAGCAAGATGCCCT+AGG	0.587690	5.2:-43354955	None:intergenic
ACAGATAATTCAACCAAGAG+TGG	0.588190	5.2:-43354378	None:intergenic
TTGAGCATAGGTAATGACCT+AGG	0.593771	5.2:+43354938	MS.gene042714:CDS
GTATATGACTGACGAGCACA+TGG	0.598121	5.2:+43354407	MS.gene042714:CDS
TCTCTATAATACTTTGAGGA+AGG	0.602499	5.2:-43353747	None:intergenic
CTGATAAATTCGATCTCATG+TGG	0.606743	5.2:-43355333	None:intergenic
GCAGAAATTTATTTCATCCG+CGG	0.609867	5.2:+43355477	MS.gene042714:CDS
AAGGCTCTCAATCGCTTCAG+GGG	0.619783	5.2:-43354223	None:intergenic
GCGATAAGTTCTCCAATAGA+GGG	0.623534	5.2:-43354257	None:intergenic
ACCTGCATATCCAGCATACG+GGG	0.638256	5.2:-43355226	None:intergenic
CCTGCCCTGCTATAAATCAG+TGG	0.647221	5.2:+43354001	MS.gene042714:CDS
TGACCAAGTATAGAATCCGA+AGG	0.648564	5.2:-43355273	None:intergenic
TGGTCTTATTGACTTCACAA+AGG	0.664654	5.2:+43354494	MS.gene042714:CDS
GACCAAGTATAGAATCCGAA+GGG	0.668575	5.2:-43355272	None:intergenic
GGATTGTCAATTGAAAATGG+TGG	0.698312	5.2:+43355419	MS.gene042714:CDS
AATCCCTTAAAACTAGCAGG+CGG	0.721464	5.2:-43354159	None:intergenic
GTGAAGTTGACAGAAATGAG+CGG	0.741565	5.2:+43355306	MS.gene042714:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAAAAATATCTAAATTTGT+TGG	-	chr5.2:43354756-43354775	None:intergenic	10.0%
!!	TGAATATAATCAAATATTTA+AGG	+	chr5.2:43355144-43355163	MS.gene042714:intron	10.0%
!!	AACATTAAAAAAGTTAATGT+AGG	+	chr5.2:43354667-43354686	MS.gene042714:intron	15.0%
!!	ACATTAAAAAAGTTAATGTA+GGG	+	chr5.2:43354668-43354687	MS.gene042714:intron	15.0%
!!	ATCTATTTATTTAGTTAAGT+TGG	+	chr5.2:43354806-43354825	MS.gene042714:intron	15.0%
!!	CATTAAAAAAGTTAATGTAG+GGG	+	chr5.2:43354669-43354688	MS.gene042714:intron	20.0%
!!	TAAAATGTGTATAGATTAGT+TGG	+	chr5.2:43354711-43354730	MS.gene042714:intron	20.0%
!!	TGAAAAATAATGAATTCAGA+GGG	-	chr5.2:43354538-43354557	None:intergenic	20.0%
!!	TTGAAAAATAATGAATTCAG+AGG	-	chr5.2:43354539-43354558	None:intergenic	20.0%
!!	TTTAAAAGAACTTCACATTT+CGG	+	chr5.2:43355072-43355091	MS.gene042714:CDS	20.0%
!!!	ACAATTTGAAACTTATGAAT+TGG	-	chr5.2:43353964-43353983	None:intergenic	20.0%
!!!	ATGTGAAGTTCTTTTAAATT+AGG	-	chr5.2:43355070-43355089	None:intergenic	20.0%
!!!	GTATATTTTCTTACTTGTTA+AGG	+	chr5.2:43354563-43354582	MS.gene042714:intron	20.0%
!!!	TTAACTTTTTTAATGTTGTG+AGG	-	chr5.2:43354664-43354683	None:intergenic	20.0%
!	AAAGATTTGGATCTTGAATT+GGG	+	chr5.2:43354051-43354070	MS.gene042714:CDS	25.0%
!	GAGAAATGATCTTAAAGATT+TGG	+	chr5.2:43354038-43354057	MS.gene042714:CDS	25.0%
!	TAAAGATTTGGATCTTGAAT+TGG	+	chr5.2:43354050-43354069	MS.gene042714:CDS	25.0%
!	TATAGGAAGTTGTATCAAAA+TGG	-	chr5.2:43353773-43353792	None:intergenic	25.0%
!	TTTGGATTGTCAATTGAAAA+TGG	+	chr5.2:43355416-43355435	MS.gene042714:CDS	25.0%
!!	AATGTATCAAGTAAGTTTTG+AGG	+	chr5.2:43355000-43355019	MS.gene042714:CDS	25.0%
!!	GAATTTATCAGATTTTTGCT+TGG	+	chr5.2:43355345-43355364	MS.gene042714:CDS	25.0%
!!!	ATGTTTTATGCAATTGACTT+TGG	+	chr5.2:43355178-43355197	MS.gene042714:intron	25.0%
	ATCATTGTGATCAACAAATG+GGG	+	chr5.2:43354858-43354877	MS.gene042714:intron	30.0%
	ATGGTCTCTATAATACTTTG+AGG	-	chr5.2:43353754-43353773	None:intergenic	30.0%
	CATCATTGTGATCAACAAAT+GGG	+	chr5.2:43354857-43354876	MS.gene042714:intron	30.0%
	TCATCATTGTGATCAACAAA+TGG	+	chr5.2:43354856-43354875	MS.gene042714:intron	30.0%
!	AATTTTGTCAAGTTTCTTGG+CGG	+	chr5.2:43354447-43354466	MS.gene042714:CDS	30.0%
!	ATATGCAGGTTTGGATTTTT+GGG	+	chr5.2:43355239-43355258	MS.gene042714:CDS	30.0%
!	TCACAACTAAAAAAGCATGA+CGG	-	chr5.2:43354099-43354118	None:intergenic	30.0%
!	TCTCTATAATACTTTGAGGA+AGG	-	chr5.2:43353750-43353769	None:intergenic	30.0%
!	TGCAATTTTGTCAAGTTTCT+TGG	+	chr5.2:43354444-43354463	MS.gene042714:CDS	30.0%
!	TTCTTGAAGTATTTGAGCAT+AGG	+	chr5.2:43354926-43354945	MS.gene042714:intron	30.0%
!!	CTTTAAGATCATTTCTCGAA+AGG	-	chr5.2:43354035-43354054	None:intergenic	30.0%
!!!	AGTTAATGTAGGGGTATTTT+TGG	+	chr5.2:43354678-43354697	MS.gene042714:intron	30.0%
	AACGTGCAAAAATGAACTAG+AGG	-	chr5.2:43354908-43354927	None:intergenic	35.0%
	AATAGATACTACTCCGAACT+TGG	-	chr5.2:43354793-43354812	None:intergenic	35.0%
	ACAGATAATTCAACCAAGAG+TGG	-	chr5.2:43354381-43354400	None:intergenic	35.0%
	AGGAGATGACCATTATAACT+AGG	-	chr5.2:43354644-43354663	None:intergenic	35.0%
	ATAGAGGGCAACTTGAAATA+AGG	-	chr5.2:43354245-43354264	None:intergenic	35.0%
	CAATCCAAATCATACATAGC+AGG	-	chr5.2:43355405-43355424	None:intergenic	35.0%
	CATTCCTGCTATGTATGATT+TGG	+	chr5.2:43355398-43355417	MS.gene042714:CDS	35.0%
	CTGATAAATTCGATCTCATG+TGG	-	chr5.2:43355336-43355355	None:intergenic	35.0%
	GAAAACAAGCTGAGTAATTG+TGG	-	chr5.2:43353848-43353867	None:intergenic	35.0%
	GAAAATCCCTTAAAACTAGC+AGG	-	chr5.2:43354165-43354184	None:intergenic	35.0%
	GCAGAAATTTATTTCATCCG+CGG	+	chr5.2:43355477-43355496	MS.gene042714:CDS	35.0%
	GGATTGTCAATTGAAAATGG+TGG	+	chr5.2:43355419-43355438	MS.gene042714:CDS	35.0%
!	CACTTTTCTGAACAACTTCT+CGG	-	chr5.2:43353900-43353919	None:intergenic	35.0%
!	GATATGCAGGTTTGGATTTT+TGG	+	chr5.2:43355238-43355257	MS.gene042714:CDS	35.0%
!	TTATGCAATTGACTTTGGCA+GGG	+	chr5.2:43355183-43355202	MS.gene042714:intron	35.0%
!	TTTATGCAATTGACTTTGGC+AGG	+	chr5.2:43355182-43355201	MS.gene042714:intron	35.0%
!!	AGAATCCACTGATTTATAGC+AGG	-	chr5.2:43354009-43354028	None:intergenic	35.0%
!!	GAATCCACTGATTTATAGCA+GGG	-	chr5.2:43354008-43354027	None:intergenic	35.0%
!!	TATTTCAAGTTGCCCTCTAT+TGG	+	chr5.2:43354245-43354264	MS.gene042714:CDS	35.0%
!!	TGGTCTTATTGACTTCACAA+AGG	+	chr5.2:43354494-43354513	MS.gene042714:CDS	35.0%
!!	TTGTGAGAAATTGACTCGAT+TGG	+	chr5.2:43354113-43354132	MS.gene042714:CDS	35.0%
	AAACCTGCATATCCAGCATA+CGG	-	chr5.2:43355231-43355250	None:intergenic	40.0%
	AATCCCTTAAAACTAGCAGG+CGG	-	chr5.2:43354162-43354181	None:intergenic	40.0%
	AGACACAAGTACTTGAGGTT+TGG	-	chr5.2:43354321-43354340	None:intergenic	40.0%
	AGCGATAAGTTCTCCAATAG+AGG	-	chr5.2:43354261-43354280	None:intergenic	40.0%
	ATACTCATTGTCTCCAGCAT+AGG	-	chr5.2:43355378-43355397	None:intergenic	40.0%
	CGACGTACTCCTAGTTATAA+TGG	+	chr5.2:43354632-43354651	MS.gene042714:intron	40.0%
	CTCAAGTACTTGTGTCTTGA+AGG	+	chr5.2:43354324-43354343	MS.gene042714:CDS	40.0%
	CTTACAATCGAGTCCAAGTT+CGG	+	chr5.2:43354777-43354796	MS.gene042714:intron	40.0%
	CTTCAAGACACAAGTACTTG+AGG	-	chr5.2:43354326-43354345	None:intergenic	40.0%
	CTTGGTGAAGAAACAGCAAT+CGG	-	chr5.2:43353939-43353958	None:intergenic	40.0%
	GAAACTTATGAATTGGCCCT+TGG	-	chr5.2:43353957-43353976	None:intergenic	40.0%
	GAACTATGCTGCAATGACTA+AGG	-	chr5.2:43355103-43355122	None:intergenic	40.0%
	GACCAAGTATAGAATCCGAA+GGG	-	chr5.2:43355275-43355294	None:intergenic	40.0%
	GCGATAAGTTCTCCAATAGA+GGG	-	chr5.2:43354260-43354279	None:intergenic	40.0%
	GTGAAGTTGACAGAAATGAG+CGG	+	chr5.2:43355306-43355325	MS.gene042714:CDS	40.0%
	GTTCTAACAGCGTCTCTTAT+AGG	-	chr5.2:43353790-43353809	None:intergenic	40.0%
	TGACCAAGTATAGAATCCGA+AGG	-	chr5.2:43355276-43355295	None:intergenic	40.0%
	TGAGCATAGGTAATGACCTA+GGG	+	chr5.2:43354939-43354958	MS.gene042714:CDS	40.0%
	TTGAGCATAGGTAATGACCT+AGG	+	chr5.2:43354938-43354957	MS.gene042714:CDS	40.0%
	TTGGATCTTGAATTGGGAGA+AGG	+	chr5.2:43354057-43354076	MS.gene042714:CDS	40.0%
	TTGGTGAAGAAACAGCAATC+GGG	-	chr5.2:43353938-43353957	None:intergenic	40.0%
	TTTCTGAACAACTTCTCGGT+CGG	-	chr5.2:43353896-43353915	None:intergenic	40.0%
!	CTAGCATTTTGTCGCGTAAA+TGG	+	chr5.2:43353809-43353828	MS.gene042714:CDS	40.0%
!!	GATTGCTGTTTCTTCACCAA+GGG	+	chr5.2:43353938-43353957	MS.gene042714:CDS	40.0%
!!!	TATCCGCCTGCTAGTTTTAA+GGG	+	chr5.2:43354156-43354175	MS.gene042714:CDS	40.0%
	AACCTGCATATCCAGCATAC+GGG	-	chr5.2:43355230-43355249	None:intergenic	45.0%
	ACGTTATAGCAAGATGCCCT+AGG	-	chr5.2:43354958-43354977	None:intergenic	45.0%
	ATAAGGCTCTCAATCGCTTC+AGG	-	chr5.2:43354228-43354247	None:intergenic	45.0%
	ATATCAAATGCCCCGTATGC+TGG	+	chr5.2:43355216-43355235	MS.gene042714:CDS	45.0%
	CCAACAAGTCTCTCGAGATT+AGG	-	chr5.2:43354477-43354496	None:intergenic	45.0%
	CCTAATCTCGAGAGACTTGT+TGG	+	chr5.2:43354474-43354493	MS.gene042714:CDS	45.0%
	CCTTGTAGATACTCCACTCT+TGG	+	chr5.2:43354365-43354384	MS.gene042714:CDS	45.0%
	GGAAGGTCACTGATCAAATC+AGG	-	chr5.2:43353733-43353752	None:intergenic	45.0%
	GTATATGACTGACGAGCACA+TGG	+	chr5.2:43354407-43354426	MS.gene042714:CDS	45.0%
	GTATGCTGGATATGCAGGTT+TGG	+	chr5.2:43355230-43355249	MS.gene042714:CDS	45.0%
	GTGTCTTGAAGGCGAATTCA+AGG	+	chr5.2:43354335-43354354	MS.gene042714:CDS	45.0%
	TAAGGCTCTCAATCGCTTCA+GGG	-	chr5.2:43354227-43354246	None:intergenic	45.0%
	TGCCCTTCGGATTCTATACT+TGG	+	chr5.2:43355270-43355289	MS.gene042714:CDS	45.0%
!	CCAAGAGTGGAGTATCTACA+AGG	-	chr5.2:43354368-43354387	None:intergenic	45.0%
!	CGCGTAAATGGAGGTACAAA+TGG	+	chr5.2:43353821-43353840	MS.gene042714:CDS	45.0%
!	GCATTTTGTCGCGTAAATGG+AGG	+	chr5.2:43353812-43353831	MS.gene042714:CDS	45.0%
!!	CGATTGCTGTTTCTTCACCA+AGG	+	chr5.2:43353937-43353956	MS.gene042714:CDS	45.0%
!!	TTGGGAAAAAGAGTGCCCTT+CGG	+	chr5.2:43355257-43355276	MS.gene042714:CDS	45.0%
!!!	GTATCCGCCTGCTAGTTTTA+AGG	+	chr5.2:43354155-43354174	MS.gene042714:CDS	45.0%
	AAGGCTCTCAATCGCTTCAG+GGG	-	chr5.2:43354226-43354245	None:intergenic	50.0%
	ACCTGCATATCCAGCATACG+GGG	-	chr5.2:43355229-43355248	None:intergenic	50.0%
	ACTTCTCGGTCGGTTGAGTT+AGG	-	chr5.2:43353886-43353905	None:intergenic	50.0%
	CCTGCCCTGCTATAAATCAG+TGG	+	chr5.2:43354001-43354020	MS.gene042714:CDS	50.0%
	CTTCTCGGTCGGTTGAGTTA+GGG	-	chr5.2:43353885-43353904	None:intergenic	50.0%
!!	CCACTGATTTATAGCAGGGC+AGG	-	chr5.2:43354004-43354023	None:intergenic	50.0%
	GCTTGGCTGTTCACCTATGC+TGG	+	chr5.2:43355362-43355381	MS.gene042714:CDS	55.0%
	GCCCCGTATGCTGGATATGC+AGG	+	chr5.2:43355225-43355244	MS.gene042714:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.2	gene	43353712	43355506	43353712	ID=MS.gene042714
chr5.2	mRNA	43353712	43355506	43353712	ID=MS.gene042714.t1;Parent=MS.gene042714
chr5.2	exon	43353712	43354515	43353712	ID=MS.gene042714.t1.exon1;Parent=MS.gene042714.t1
chr5.2	CDS	43353712	43354515	43353712	ID=cds.MS.gene042714.t1;Parent=MS.gene042714.t1
chr5.2	exon	43354935	43355093	43354935	ID=MS.gene042714.t1.exon2;Parent=MS.gene042714.t1
chr5.2	CDS	43354935	43355093	43354935	ID=cds.MS.gene042714.t1;Parent=MS.gene042714.t1
chr5.2	exon	43355204	43355506	43355204	ID=MS.gene042714.t1.exon3;Parent=MS.gene042714.t1
chr5.2	CDS	43355204	43355506	43355204	ID=cds.MS.gene042714.t1;Parent=MS.gene042714.t1

Gene Sequence

>MS.gene042714

ATGGATGATTTTTCGGGTCCTGATTTGATCAGTGACCTTCCTCAAAGTATTATAGAGACCATTTTGATACAACTTCCTATAAGAGACGCTGTTAGAACTAGCATTTTGTCGCGTAAATGGAGGTACAAATGGTCCACAATTACTCAGCTTGTTTTCGACGAAAAATGTTACCCTAACTCAACCGACCGAGAAGTTGTTCAGAAAAGTGTTGTTGAGTTTATCACCCGATTGCTGTTTCTTCACCAAGGGCCAATTCATAAGTTTCAAATTGTGAATACAAGCTTGCAGACCTGCCCTGCTATAAATCAGTGGATTCTTTTCCTTTCGAGAAATGATCTTAAAGATTTGGATCTTGAATTGGGAGAAGGTGAATTCTTTAGAATGCCGTCATGCTTTTTTAGTTGTGAGAAATTGACTCGATTGGAGCTCTCGCGCTGCGAGTTGTATCCGCCTGCTAGTTTTAAGGGATTTTCGTATTTGAAGTGTCTCAATCTTCATCAAGTTTTGATATCCCCTGAAGCGATTGAGAGCCTTATTTCAAGTTGCCCTCTATTGGAGAACTTATCGCTGTCATACTTTGACTGTTTAGCGCTTACTGTACGTGCTCCAAACCTCAAGTACTTGTGTCTTGAAGGCGAATTCAAGGAAATTTGCCTTGTAGATACTCCACTCTTGGTTGAATTATCTGTTGCTATGTATATGACTGACGAGCACATGGAGCAAAGCTCAACTTGCAATTTTGTCAAGTTTCTTGGCGGTGTGCCTAATCTCGAGAGACTTGTTGGTCTTATTGACTTCACAAAGGTAACAGTTTGTTCGTACTCCCTCTGAATTCATTATTTTTCAAACATGTATATTTTCTTACTTGTTAAGGATGATAGTGAAGTGCATTTCATTTGTAAAAATGAAAATATATTTATCGACGTACTCCTAGTTATAATGGTCATCTCCTCACAACATTAAAAAAGTTAATGTAGGGGTATTTTTGGAATAATACTATAAAATGTGTATAGATTAGTTGGCAATTGCTTATATTTGAATCCAACAAATTTAGATATTTTTTTGCTTACAATCGAGTCCAAGTTCGGAGTAGTATCTATTTATTTAGTTAAGTTGGTTAACACTACTTTTGCATATAGTTTTGTCATCATTGTGATCAACAAATGGGGTGTTCTGTTGTTATGTTTGTCTAACCTCTAGTTCATTTTTGCACGTTCTTGAAGTATTTGAGCATAGGTAATGACCTAGGGCATCTTGCTATAACGTACAACAATTTAGAGACTATTGAAATGTATCAAGTAAGTTTTGAGGATATGAAAGAAATACTTGTCGTCTTTCGCTTGATTACAAGCTCTCCTAATTTAAAAGAACTTCACATTTCGGTAAGTCCTTAGTCATTGCAGCATAGTTCAGTTGTTATTTTTAAATATCATGAATATAATCAAATATTTAAGGTTTATTACTGCATGTTTTATGCAATTGACTTTGGCAGGGTTCATCAAACATATCAAATGCCCCGTATGCTGGATATGCAGGTTTGGATTTTTGGGAAAAAGAGTGCCCTTCGGATTCTATACTTGGTCAGCTTAAACTTGTGAAGTTGACAGAAATGAGCGGTATGCCACATGAGATCGAATTTATCAGATTTTTGCTTGGCTGTTCACCTATGCTGGAGACAATGAGTATCATTCCTGCTATGTATGATTTGGATTGTCAATTGAAAATGGTGGTCGAACTGATGAAATTTCGAAGAGCTTCTACTAAAGCAGAAATTTATTTCATCCGCGGAGATTAA

Protein sequence

>MS.gene042714.t1

MDDFSGPDLISDLPQSIIETILIQLPIRDAVRTSILSRKWRYKWSTITQLVFDEKCYPNSTDREVVQKSVVEFITRLLFLHQGPIHKFQIVNTSLQTCPAINQWILFLSRNDLKDLDLELGEGEFFRMPSCFFSCEKLTRLELSRCELYPPASFKGFSYLKCLNLHQVLISPEAIESLISSCPLLENLSLSYFDCLALTVRAPNLKYLCLEGEFKEICLVDTPLLVELSVAMYMTDEHMEQSSTCNFVKFLGGVPNLERLVGLIDFTKYLSIGNDLGHLAITYNNLETIEMYQVSFEDMKEILVVFRLITSSPNLKELHISGSSNISNAPYAGYAGLDFWEKECPSDSILGQLKLVKLTEMSGMPHEIEFIRFLLGCSPMLETMSIIPAMYDLDCQLKMVVELMKFRRASTKAEIYFIRGD