AlfalfaGEDB | MS.gene045984

M. sativa cultivar XinJiangDaYe / MS.gene045984

KEGG: -
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045984.t1	XP_013443027.1	99.5	421	2	0	1	421	1	421	3.70E-242	847

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045984.t1	Q9FZ70	54.9	415	181	5	7	419	5	415	3.1e-117	423.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045984.t1	A0A072TI09	99.5	421	2	0	1	421	1	421	2.6e-242	847.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene64984	MS.gene045984	PPI
MS.gene72958	MS.gene045984	PPI
MS.gene99980	MS.gene045984	PPI
MS.gene63221	MS.gene045984	PPI
MS.gene007875	MS.gene045984	PPI
MS.gene25418	MS.gene045984	PPI
MS.gene63260	MS.gene045984	PPI
MS.gene038427	MS.gene045984	PPI
MS.gene25299	MS.gene045984	PPI
MS.gene043122	MS.gene045984	PPI
MS.gene63210	MS.gene045984	PPI
MS.gene72960	MS.gene045984	PPI
MS.gene25297	MS.gene045984	PPI
MS.gene34766	MS.gene045984	PPI
MS.gene053312	MS.gene045984	PPI
MS.gene72952	MS.gene045984	PPI
MS.gene061286	MS.gene045984	PPI
MS.gene065234	MS.gene045984	PPI
MS.gene34733	MS.gene045984	PPI
MS.gene34706	MS.gene045984	PPI
MS.gene34753	MS.gene045984	PPI
MS.gene72954	MS.gene045984	PPI
MS.gene060770	MS.gene045984	PPI
MS.gene053313	MS.gene045984	PPI
MS.gene64988	MS.gene045984	PPI
MS.gene25396	MS.gene045984	PPI
MS.gene34730	MS.gene045984	PPI
MS.gene055882	MS.gene045984	PPI
MS.gene63224	MS.gene045984	PPI
MS.gene99983	MS.gene045984	PPI
MS.gene63256	MS.gene045984	PPI
MS.gene49513	MS.gene045984	PPI
MS.gene69850	MS.gene045984	PPI
MS.gene72957	MS.gene045984	PPI
MS.gene63257	MS.gene045984	PPI
MS.gene060769	MS.gene045984	PPI
MS.gene055883	MS.gene045984	PPI
MS.gene63214	MS.gene045984	PPI
MS.gene25296	MS.gene045984	PPI
MS.gene63217	MS.gene045984	PPI
MS.gene032296	MS.gene045984	PPI
MS.gene25450	MS.gene045984	PPI
MS.gene34738	MS.gene045984	PPI
MS.gene36067	MS.gene045984	PPI
MS.gene63222	MS.gene045984	PPI
MS.gene63177	MS.gene045984	PPI
MS.gene25449	MS.gene045984	PPI
MS.gene060771	MS.gene045984	PPI
MS.gene017193	MS.gene045984	PPI
MS.gene34801	MS.gene045984	PPI
MS.gene72955	MS.gene045984	PPI
MS.gene63104	MS.gene045984	PPI
MS.gene99982	MS.gene045984	PPI
MS.gene34707	MS.gene045984	PPI
MS.gene72962	MS.gene045984	PPI
MS.gene72956	MS.gene045984	PPI
MS.gene63218	MS.gene045984	PPI
MS.gene93027	MS.gene045984	PPI
MS.gene63111	MS.gene045984	PPI
MS.gene25298	MS.gene045984	PPI
MS.gene34215	MS.gene045984	PPI
MS.gene073176	MS.gene045984	PPI
MS.gene34804	MS.gene045984	PPI
MS.gene25451	MS.gene045984	PPI
MS.gene25347	MS.gene045984	PPI
MS.gene48656	MS.gene045984	PPI
MS.gene64989	MS.gene045984	PPI
MS.gene63223	MS.gene045984	PPI
MS.gene63105	MS.gene045984	PPI
MS.gene64993	MS.gene045984	PPI
MS.gene062526	MS.gene045984	PPI
MS.gene72959	MS.gene045984	PPI
MS.gene055877	MS.gene045984	PPI
MS.gene72963	MS.gene045984	PPI
MS.gene36065	MS.gene045984	PPI
MS.gene25353	MS.gene045984	PPI
MS.gene056517	MS.gene045984	PPI
MS.gene34735	MS.gene045984	PPI
MS.gene92095	MS.gene045984	PPI
MS.gene25415	MS.gene045984	PPI
MS.gene34703	MS.gene045984	PPI
MS.gene36066	MS.gene045984	PPI
MS.gene63095	MS.gene045984	PPI
MS.gene055880	MS.gene045984	PPI
MS.gene043123	MS.gene045984	PPI
MS.gene25412	MS.gene045984	PPI
MS.gene25410	MS.gene045984	PPI
MS.gene25348	MS.gene045984	PPI
MS.gene63113	MS.gene045984	PPI
MS.gene63185	MS.gene045984	PPI
MS.gene34736	MS.gene045984	PPI
MS.gene63094	MS.gene045984	PPI
MS.gene053311	MS.gene045984	PPI
MS.gene062537	MS.gene045984	PPI
MS.gene63112	MS.gene045984	PPI
MS.gene72961	MS.gene045984	PPI
MS.gene34740	MS.gene045984	PPI
MS.gene64992	MS.gene045984	PPI
MS.gene63259	MS.gene045984	PPI
MS.gene63213	MS.gene045984	PPI
MS.gene25448	MS.gene045984	PPI
MS.gene34824	MS.gene045984	PPI
MS.gene25411	MS.gene045984	PPI
MS.gene25414	MS.gene045984	PPI
MS.gene34739	MS.gene045984	PPI
MS.gene34731	MS.gene045984	PPI
MS.gene062282	MS.gene045984	PPI
MS.gene007876	MS.gene045984	PPI
MS.gene25344	MS.gene045984	PPI
MS.gene25386	MS.gene045984	PPI
MS.gene065516	MS.gene045984	PPI
MS.gene25352	MS.gene045984	PPI
MS.gene34704	MS.gene045984	PPI
MS.gene34825	MS.gene045984	PPI
MS.gene95710	MS.gene045984	PPI
MS.gene34802	MS.gene045984	PPI
MS.gene61631	MS.gene045984	PPI
MS.gene34216	MS.gene045984	PPI
MS.gene48654	MS.gene045984	PPI
MS.gene34737	MS.gene045984	PPI
MS.gene032295	MS.gene045984	PPI
MS.gene067702	MS.gene045984	PPI
MS.gene63212	MS.gene045984	PPI
MS.gene66626	MS.gene045984	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045984.t1	MTR_0049s0110	99.525	421	2	0	1	421	1	421	0.0	860
MS.gene045984.t1	MTR_0049s0110	99.688	321	1	0	1	321	1	321	0.0	654
MS.gene045984.t1	MTR_0049s0110	99.381	323	2	0	1	323	1	323	0.0	654
MS.gene045984.t1	MTR_0049s0110	100.000	268	0	0	1	268	1	268	0.0	550
MS.gene045984.t1	MTR_1g021825	39.578	427	226	8	7	418	16	425	1.88e-90	280
MS.gene045984.t1	MTR_1g021825	39.344	427	227	8	7	418	87	496	1.88e-89	280
MS.gene045984.t1	MTR_2g047872	35.363	427	259	7	1	417	16	435	8.30e-76	243
MS.gene045984.t1	MTR_2g091145	36.407	423	249	10	8	417	21	436	1.65e-75	242
MS.gene045984.t1	MTR_2g047858	35.566	433	237	9	7	415	114	528	1.00e-72	237
MS.gene045984.t1	MTR_1g013580	35.476	420	253	8	8	417	19	430	1.69e-72	234
MS.gene045984.t1	MTR_1g011400	37.264	424	248	9	7	418	6	423	9.24e-72	232
MS.gene045984.t1	MTR_5g040850	34.722	432	246	10	8	421	7	420	4.49e-70	227
MS.gene045984.t1	MTR_4g057725	34.571	431	247	12	8	417	22	438	2.95e-67	221
MS.gene045984.t1	MTR_1g013840	34.651	430	257	10	7	421	55	475	3.34e-67	221
MS.gene045984.t1	MTR_2g047848	34.266	429	259	9	8	421	7	427	8.60e-67	219
MS.gene045984.t1	MTR_1g021820	35.167	418	250	8	7	417	27	430	4.62e-66	217
MS.gene045984.t1	MTR_1g011430	34.204	421	202	10	7	418	6	360	5.93e-66	215
MS.gene045984.t1	MTR_1g014450	31.935	429	265	9	8	421	16	432	4.66e-63	209
MS.gene045984.t1	MTR_1g011410	40.367	327	187	5	7	326	314	639	2.45e-62	213
MS.gene045984.t1	MTR_1g011410	35.849	318	173	6	7	320	6	296	1.31e-51	184
MS.gene045984.t1	MTR_1g016340	34.722	432	251	12	7	417	14	435	3.33e-62	207
MS.gene045984.t1	MTR_1g016340	34.722	432	251	12	7	417	19	440	4.26e-62	207
MS.gene045984.t1	MTR_1g013560	31.840	424	270	9	8	418	19	436	1.94e-60	203
MS.gene045984.t1	MTR_1g016310	36.164	318	189	7	7	311	19	335	1.54e-52	179
MS.gene045984.t1	MTR_1g016310	36.076	316	188	7	7	309	19	333	6.87e-51	177
MS.gene045984.t1	MTR_1g013560	32.822	326	205	7	8	320	19	343	4.01e-48	167
MS.gene045984.t1	MTR_1g013610	34.056	323	186	6	8	320	7	312	3.49e-47	166
MS.gene045984.t1	MTR_5g038430	32.701	422	253	12	8	419	96	496	1.68e-45	164
MS.gene045984.t1	MTR_1g013630	32.919	322	176	9	8	320	39	329	2.04e-42	153
MS.gene045984.t1	MTR_1g028860	37.500	208	121	3	24	222	6	213	6.97e-40	144
MS.gene045984.t1	MTR_7g090750	30.337	445	249	14	8	421	11	425	8.43e-38	142
MS.gene045984.t1	MTR_0227s0010	35.659	258	134	4	8	261	15	244	9.21e-36	134
MS.gene045984.t1	MTR_2g047852	35.000	220	114	3	7	222	8	202	3.11e-35	129
MS.gene045984.t1	MTR_1g013280	29.211	380	206	13	60	421	11	345	1.42e-33	129
MS.gene045984.t1	MTR_8g095590	31.532	333	166	12	8	326	15	299	5.99e-27	112
MS.gene045984.t1	MTR_4g032845	33.036	224	129	9	8	215	3	221	7.30e-20	91.7
MS.gene045984.t1	MTR_7g098510	24.661	442	238	15	5	417	15	390	3.78e-19	89.0
MS.gene045984.t1	MTR_5g039950	24.876	402	260	12	8	395	23	396	1.07e-18	87.8
MS.gene045984.t1	MTR_4g080787	24.342	456	274	18	8	414	19	452	1.24e-18	88.2
MS.gene045984.t1	MTR_2g082800	27.239	268	159	6	6	241	25	288	4.20e-18	86.3
MS.gene045984.t1	MTR_2g082850	28.623	276	153	8	6	241	20	291	3.59e-17	83.2
MS.gene045984.t1	MTR_7g056433	24.826	431	249	15	8	417	12	388	5.49e-17	82.4
MS.gene045984.t1	MTR_3g048290	26.157	432	256	17	1	386	18	432	1.05e-16	82.4
MS.gene045984.t1	MTR_4g080773	23.362	458	279	20	8	414	19	455	1.60e-16	81.6
MS.gene045984.t1	MTR_4g080773	23.362	458	279	20	8	414	19	455	1.97e-16	81.6
MS.gene045984.t1	MTR_1g115245	29.577	213	134	5	6	211	24	227	3.57e-16	79.3
MS.gene045984.t1	MTR_1g013620	28.870	239	136	5	178	415	1	206	5.74e-16	77.0
MS.gene045984.t1	MTR_2g072530	24.178	426	259	16	8	391	13	416	1.84e-15	78.6
MS.gene045984.t1	MTR_4g080590	26.932	427	244	19	8	391	23	424	3.10e-15	77.8
MS.gene045984.t1	MTR_4g045900	23.838	495	286	19	8	417	26	514	4.13e-15	77.4
MS.gene045984.t1	MTR_2g100570	29.907	214	129	6	8	210	72	275	5.51e-15	77.0
MS.gene045984.t1	MTR_2g100570	29.907	214	129	6	8	210	72	275	6.32e-15	76.6
MS.gene045984.t1	MTR_8g014160	23.678	435	256	19	8	417	41	424	8.11e-15	76.3
MS.gene045984.t1	MTR_2g100570	30.556	216	125	7	8	210	72	275	9.24e-15	76.6
MS.gene045984.t1	MTR_5g007750	51.948	77	31	2	342	418	24	94	1.13e-14	69.7
MS.gene045984.t1	MTR_2g072240	22.807	456	257	16	8	412	10	421	1.92e-14	75.1
MS.gene045984.t1	MTR_8g015770	28.916	249	136	10	8	220	6	249	2.14e-14	75.5
MS.gene045984.t1	MTR_7g098570	24.105	419	251	17	8	411	20	386	6.33e-14	73.9
MS.gene045984.t1	MTR_8g062270	27.891	294	169	11	6	258	14	305	1.34e-13	72.8
MS.gene045984.t1	MTR_2g100590	27.011	348	198	15	8	310	42	378	1.72e-13	72.4
MS.gene045984.t1	MTR_2g100590	27.011	348	198	15	8	310	42	378	1.72e-13	72.4
MS.gene045984.t1	MTR_7g056447	30.303	198	123	7	8	196	9	200	1.75e-13	70.9
MS.gene045984.t1	MTR_3g108560	23.294	425	257	16	8	418	20	389	2.32e-13	71.6
MS.gene045984.t1	MTR_2g100590	27.011	348	198	15	8	310	42	378	3.05e-13	72.0
MS.gene045984.t1	MTR_3g105060	24.038	416	253	17	8	417	14	372	3.42e-13	70.9
MS.gene045984.t1	MTR_4g080590	31.401	207	131	7	8	208	23	224	4.37e-13	70.9
MS.gene045984.t1	MTR_5g005690	28.395	162	106	4	12	169	25	180	8.31e-13	70.5
MS.gene045984.t1	MTR_7g076570	22.098	448	295	12	6	418	46	474	1.11e-12	70.1
MS.gene045984.t1	MTR_7g023330	23.457	405	232	13	6	387	18	367	1.26e-12	69.3
MS.gene045984.t1	MTR_7g094030	35.211	142	83	4	5	144	25	159	1.89e-12	69.3
MS.gene045984.t1	MTR_1g115250	31.188	202	121	7	6	192	30	228	2.40e-12	68.6
MS.gene045984.t1	MTR_4g088845	23.697	422	246	14	13	388	24	415	2.60e-12	68.6
MS.gene045984.t1	MTR_2g082860	44.000	75	40	1	2	76	21	93	3.29e-12	63.5
MS.gene045984.t1	MTR_7g032380	30.270	185	121	6	8	188	11	191	3.55e-12	67.8
MS.gene045984.t1	MTR_7g023310	24.942	429	247	14	8	387	26	428	3.61e-12	68.2
MS.gene045984.t1	MTR_7g098480	23.202	431	262	17	5	420	15	391	4.36e-12	68.2
MS.gene045984.t1	MTR_7g088260	24.096	415	261	14	5	411	88	456	5.92e-12	67.8
MS.gene045984.t1	MTR_8g015830	30.288	208	119	9	8	190	8	214	5.95e-12	67.8
MS.gene045984.t1	MTR_8g015680	30.556	216	131	9	8	205	7	221	6.72e-12	67.8
MS.gene045984.t1	MTR_7g034115	23.844	411	259	14	8	410	11	375	9.84e-12	66.6
MS.gene045984.t1	MTR_7g025650	29.565	230	136	10	8	212	19	247	1.08e-11	67.0
MS.gene045984.t1	MTR_8g015830	30.288	208	119	9	8	190	8	214	1.10e-11	67.0
MS.gene045984.t1	MTR_8g018340	32.258	217	112	11	8	199	6	212	1.65e-11	66.6
MS.gene045984.t1	MTR_2g072720	33.333	114	73	2	8	118	39	152	1.88e-11	66.2
MS.gene045984.t1	MTR_4g119700	30.702	228	130	10	8	210	6	230	4.25e-11	65.1
MS.gene045984.t1	MTR_1g041245	30.570	193	120	8	8	193	11	196	4.98e-11	64.3
MS.gene045984.t1	MTR_6g013240	28.780	205	123	7	8	190	72	275	5.46e-11	65.1
MS.gene045984.t1	MTR_7g026500	27.753	227	149	5	8	224	14	235	6.21e-11	64.3
MS.gene045984.t1	MTR_2g082880	29.064	203	133	6	8	206	10	205	6.65e-11	64.3
MS.gene045984.t1	MTR_6g013380	28.780	205	123	7	8	190	67	270	6.95e-11	64.7
MS.gene045984.t1	MTR_3g023470	30.000	220	128	9	8	214	15	221	8.54e-11	63.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045984.t1	AT1G13570	58.894	416	165	5	6	419	4	415	2.06e-164	468
MS.gene045984.t1	AT1G13570	58.894	416	165	5	6	419	4	415	2.06e-164	468
MS.gene045984.t1	AT1G13570	66.038	265	87	2	6	268	4	267	8.76e-116	340
MS.gene045984.t1	AT4G10400	26.005	423	284	14	8	417	2	408	1.60e-22	99.4
MS.gene045984.t1	AT4G10400	26.005	423	284	14	8	417	2	408	1.60e-22	99.4
MS.gene045984.t1	AT4G10400	26.005	423	284	14	8	417	2	408	1.60e-22	99.4
MS.gene045984.t1	AT4G14103	33.891	239	144	7	3	228	2	239	4.01e-22	97.8
MS.gene045984.t1	AT4G14103	33.891	239	144	7	3	228	2	239	4.01e-22	97.8
MS.gene045984.t1	AT4G14103	33.891	239	144	7	3	228	2	239	4.06e-22	98.2
MS.gene045984.t1	AT5G56420	26.147	436	276	16	8	417	6	421	1.05e-21	97.1
MS.gene045984.t1	AT5G56420	26.147	436	276	16	8	417	6	421	1.05e-21	97.1
MS.gene045984.t1	AT5G56420	26.147	436	276	16	8	417	6	421	1.05e-21	97.1
MS.gene045984.t1	AT4G14096	27.857	420	258	13	3	384	2	414	2.00e-21	96.7
MS.gene045984.t1	AT4G14096	27.857	420	258	13	3	384	2	414	2.00e-21	96.7
MS.gene045984.t1	AT5G22610	30.294	340	190	17	8	318	18	339	3.83e-20	92.8
MS.gene045984.t1	AT1G32375	24.717	441	280	18	8	417	2	421	1.82e-18	87.4
MS.gene045984.t1	AT1G32375	24.717	441	280	18	8	417	2	421	1.82e-18	87.4
MS.gene045984.t1	AT1G13780	27.548	363	204	15	6	318	8	361	2.10e-18	87.4
MS.gene045984.t1	AT5G22730	34.715	193	107	8	5	188	25	207	5.92e-18	85.5
MS.gene045984.t1	AT1G13780	28.947	342	191	15	6	311	8	333	7.34e-18	84.7
MS.gene045984.t1	AT5G22720	24.421	475	267	15	8	420	23	467	7.82e-18	85.9
MS.gene045984.t1	AT3G26922	29.845	258	138	11	8	230	14	263	1.04e-17	83.6
MS.gene045984.t1	AT3G26922	29.845	258	138	11	8	230	14	263	1.04e-17	83.6
MS.gene045984.t1	AT5G22730	34.715	193	107	8	5	188	25	207	1.20e-17	85.1
MS.gene045984.t1	AT5G22730	34.715	193	107	8	5	188	25	207	1.20e-17	85.1
MS.gene045984.t1	AT5G22610	33.838	198	113	8	8	194	18	208	1.69e-17	84.7
MS.gene045984.t1	AT5G56370	23.991	446	276	15	8	417	2	420	1.83e-17	84.3
MS.gene045984.t1	AT5G56370	23.991	446	276	15	8	417	2	420	1.83e-17	84.3
MS.gene045984.t1	AT3G59200	26.211	351	223	14	3	326	2	343	2.41e-17	83.6
MS.gene045984.t1	AT5G02930	28.906	256	146	10	6	248	26	258	3.76e-17	83.6
MS.gene045984.t1	AT3G59200	26.211	351	223	14	3	326	2	343	5.35e-17	83.6
MS.gene045984.t1	AT3G58880	27.791	421	256	16	8	386	3	417	6.71e-17	82.8
MS.gene045984.t1	AT5G38590	25.882	425	265	18	8	405	2	403	1.25e-16	81.6
MS.gene045984.t1	AT5G53840	24.385	447	278	18	5	415	15	437	3.23e-16	80.9
MS.gene045984.t1	AT3G52680	27.224	371	201	15	6	337	19	359	3.43e-16	80.1
MS.gene045984.t1	AT3G52680	27.654	358	190	15	6	324	19	346	1.17e-15	79.0
MS.gene045984.t1	AT5G03100	27.925	265	148	9	6	245	7	253	1.24e-15	77.8
MS.gene045984.t1	AT5G03100	27.925	265	148	9	6	245	7	253	1.24e-15	77.8
MS.gene045984.t1	AT1G58310	25.316	395	205	14	1	322	1	378	1.36e-15	79.0
MS.gene045984.t1	AT4G13965	33.155	187	113	6	6	188	8	186	1.47e-15	78.6
MS.gene045984.t1	AT5G02910	26.157	432	258	14	2	391	5	417	1.74e-15	78.6
MS.gene045984.t1	AT5G56370	27.027	259	162	6	8	257	2	242	2.87e-15	76.6
MS.gene045984.t1	AT5G02910	27.195	353	204	9	2	320	5	338	3.04e-15	77.0
MS.gene045984.t1	AT5G02910	27.195	353	204	9	2	320	5	338	3.50e-15	77.0
MS.gene045984.t1	AT1G66310	23.707	464	255	17	8	415	19	439	3.81e-15	77.4
MS.gene045984.t1	AT3G58940	25.366	410	266	13	8	386	2	402	4.55e-15	77.8
MS.gene045984.t1	AT3G58940	25.366	410	266	13	8	386	2	402	4.55e-15	77.8
MS.gene045984.t1	AT4G27050	24.729	461	286	17	8	418	4	453	5.29e-15	77.0
MS.gene045984.t1	AT4G27050	24.729	461	286	17	8	418	4	453	5.29e-15	77.0
MS.gene045984.t1	AT4G27050	24.729	461	286	17	8	418	4	453	5.29e-15	77.0
MS.gene045984.t1	AT4G27050	24.729	461	286	17	8	418	4	453	5.29e-15	77.0
MS.gene045984.t1	AT4G27050	24.729	461	286	17	8	418	4	453	5.29e-15	77.0
MS.gene045984.t1	AT3G59210	31.472	197	126	6	1	190	1	195	1.26e-14	75.9
MS.gene045984.t1	AT3G59210	31.472	197	126	6	1	190	1	195	1.26e-14	75.9
MS.gene045984.t1	AT3G59210	31.472	197	126	6	1	190	1	195	1.26e-14	75.9
MS.gene045984.t1	AT3G59210	31.472	197	126	6	1	190	1	195	1.26e-14	75.9
MS.gene045984.t1	AT3G59210	31.472	197	126	6	1	190	1	195	1.26e-14	75.9
MS.gene045984.t1	AT1G67390	29.293	297	170	12	8	278	41	323	1.53e-14	75.9
MS.gene045984.t1	AT1G66300	24.835	455	271	22	8	418	29	456	1.60e-14	75.5
MS.gene045984.t1	AT3G58860	22.819	447	288	18	8	411	7	439	3.16e-14	74.7
MS.gene045984.t1	AT1G80470	29.388	245	151	8	8	236	15	253	3.83e-14	74.3
MS.gene045984.t1	AT5G38590	27.969	261	163	9	8	258	2	247	1.04e-13	71.6
MS.gene045984.t1	AT5G56690	24.725	364	228	12	10	342	4	352	1.16e-13	72.8
MS.gene045984.t1	AT3G49150	25.627	359	241	10	1	345	9	355	1.30e-13	72.8
MS.gene045984.t1	AT1G16930	28.000	250	147	11	6	236	13	248	1.80e-13	72.4
MS.gene045984.t1	AT1G16930	28.000	250	147	11	6	236	13	248	1.80e-13	72.4
MS.gene045984.t1	AT1G16930	28.000	250	147	11	6	236	13	248	1.80e-13	72.4
MS.gene045984.t1	AT4G00315	23.362	458	284	17	8	417	2	440	1.88e-13	72.4
MS.gene045984.t1	AT4G00160	31.217	189	119	6	6	188	14	197	1.95e-13	72.4
MS.gene045984.t1	AT1G66290	30.151	199	115	8	2	190	21	205	2.29e-13	72.0
MS.gene045984.t1	AT2G04230	26.941	219	148	6	3	211	8	224	3.54e-13	71.2
MS.gene045984.t1	AT1G51370	28.854	253	154	9	8	255	19	250	4.46e-13	70.5
MS.gene045984.t1	AT1G78750	24.594	431	251	20	8	386	18	426	4.56e-13	71.2
MS.gene045984.t1	AT1G78750	24.594	431	251	20	8	386	18	426	4.56e-13	71.2
MS.gene045984.t1	AT3G26922	28.631	241	129	11	25	230	2	234	4.75e-13	69.7
MS.gene045984.t1	AT3G26922	28.631	241	129	11	25	230	2	234	4.75e-13	69.7
MS.gene045984.t1	AT3G59160	26.259	278	162	8	3	238	8	284	4.97e-13	70.9
MS.gene045984.t1	AT3G03040	25.714	245	168	6	8	238	2	246	5.07e-13	70.9
MS.gene045984.t1	AT1G55660	24.138	464	273	20	8	417	53	491	8.23e-13	70.5
MS.gene045984.t1	AT4G15060	25.779	353	219	12	1	320	19	361	8.78e-13	70.1
MS.gene045984.t1	AT5G56440	25.054	467	254	20	8	417	2	429	8.90e-13	70.1
MS.gene045984.t1	AT1G51370	28.854	253	154	9	8	255	19	250	1.17e-12	69.7
MS.gene045984.t1	AT5G38392	30.573	157	102	4	8	157	2	158	1.37e-12	67.0
MS.gene045984.t1	AT1G51370	28.854	253	154	9	8	255	19	250	1.45e-12	69.3
MS.gene045984.t1	AT5G56400	26.124	356	198	13	8	325	33	361	1.51e-12	69.3
MS.gene045984.t1	AT2G42730	24.094	469	278	19	4	415	1	448	2.15e-12	68.9
MS.gene045984.t1	AT5G02700	26.818	220	136	9	6	216	25	228	2.25e-12	68.9
MS.gene045984.t1	AT3G44060	23.251	443	278	18	13	415	4	424	2.50e-12	68.6
MS.gene045984.t1	AT4G26340	24.550	444	274	18	8	417	2	418	2.88e-12	68.6
MS.gene045984.t1	AT4G09920	27.931	290	177	12	8	276	2	280	4.12e-12	67.0
MS.gene045984.t1	AT4G09920	27.931	290	177	12	8	276	2	280	4.12e-12	67.0
MS.gene045984.t1	AT4G09920	27.931	290	177	12	8	276	2	280	4.12e-12	67.0
MS.gene045984.t1	AT2G26860	24.205	409	266	14	8	386	2	396	4.87e-12	67.8
MS.gene045984.t1	AT2G26860	24.205	409	266	14	8	386	2	396	4.87e-12	67.8
MS.gene045984.t1	AT4G09920	27.303	304	188	13	8	289	2	294	4.97e-12	67.0
MS.gene045984.t1	AT4G09920	27.303	304	188	13	8	289	2	294	4.97e-12	67.0
MS.gene045984.t1	AT3G58900	21.968	437	268	12	8	386	2	423	5.22e-12	67.8
MS.gene045984.t1	AT3G51530	28.182	220	138	8	4	214	26	234	7.62e-12	67.4
MS.gene045984.t1	AT1G78760	22.078	462	275	18	5	415	13	440	7.63e-12	67.4
MS.gene045984.t1	AT1G80960	29.146	199	131	6	2	190	5	203	9.25e-12	67.0
MS.gene045984.t1	AT4G13960	23.888	427	264	18	8	386	2	415	1.22e-11	66.6
MS.gene045984.t1	AT4G13960	23.888	427	264	18	8	386	2	415	1.22e-11	66.6
MS.gene045984.t1	AT5G44490	29.231	195	116	8	8	190	17	201	1.66e-11	66.2
MS.gene045984.t1	AT1G21990	24.359	468	286	17	8	418	9	465	1.95e-11	66.2
MS.gene045984.t1	AT5G44490	29.231	195	116	8	8	190	17	201	1.96e-11	65.9
MS.gene045984.t1	AT3G28410	27.149	221	134	10	6	216	26	229	1.99e-11	65.9
MS.gene045984.t1	AT1G69630	22.976	457	277	17	8	415	18	448	2.01e-11	65.9
MS.gene045984.t1	AT3G59240	23.529	442	262	16	1	384	1	424	2.09e-11	66.2
MS.gene045984.t1	AT1G80960	29.534	193	126	6	8	190	50	242	2.25e-11	65.5
MS.gene045984.t1	AT1G80960	29.381	194	127	6	8	191	50	243	2.81e-11	65.5
MS.gene045984.t1	AT1G80960	29.381	194	127	6	8	191	50	243	2.81e-11	65.5
MS.gene045984.t1	AT1G80960	29.381	194	127	6	8	191	50	243	2.81e-11	65.5
MS.gene045984.t1	AT1G80960	29.381	194	127	6	8	191	50	243	3.19e-11	65.5
MS.gene045984.t1	AT3G59230	29.442	197	125	6	6	188	9	205	3.83e-11	65.1
MS.gene045984.t1	AT5G53635	23.297	455	275	19	9	418	1	426	4.24e-11	64.7
MS.gene045984.t1	AT3G58930	21.414	481	296	14	8	418	2	470	6.65e-11	64.3
MS.gene045984.t1	AT3G58930	21.414	481	296	14	8	418	2	470	6.65e-11	64.3
MS.gene045984.t1	AT3G58930	21.414	481	296	14	8	418	2	470	6.65e-11	64.3
MS.gene045984.t1	AT3G59190	22.244	499	291	19	3	418	7	491	7.61e-11	64.3
MS.gene045984.t1	AT5G44950	26.316	190	129	4	6	190	2	185	8.93e-11	63.9
MS.gene045984.t1	AT1G05080	26.697	442	276	20	8	417	13	438	9.11e-11	63.9

Find 70 sgRNAs with CRISPR-Local

Find 107 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTTCTAACAGCGTCTCTTAT+AGG	0.225951	5.4:-40955780	None:intergenic
CATTCCTGCTATGTATGATT+TGG	0.249434	5.4:+40957405	MS.gene045984:CDS
CATTTCAAGTTGCCCTCTAT+TGG	0.259241	5.4:+40956238	MS.gene045984:CDS
GAGAAATGATCTTAAAGATT+TGG	0.264764	5.4:+40956031	MS.gene045984:CDS
ATGAGGCTCTCAATCGCTTC+AGG	0.278812	5.4:-40956218	None:intergenic
TCTTGTAGATACTCCACTTT+TGG	0.280739	5.4:+40956358	MS.gene045984:CDS
TAAAGATTTGGATCTTGAAT+TGG	0.299254	5.4:+40956043	MS.gene045984:CDS
ACTTCTCGGTCGGTTGAGTT+AGG	0.307778	5.4:-40955876	None:intergenic
TTTGGATTGTCAATTGAAAA+TGG	0.313508	5.4:+40957423	MS.gene045984:CDS
TTTAAAAGAACTTCACATTT+CGG	0.333919	5.4:+40957075	MS.gene045984:CDS
ACAATTTGAAACTTATGAAT+TGG	0.341616	5.4:-40955954	None:intergenic
TGCCCTTCGGATTCTATACT+TGG	0.376171	5.4:+40957277	MS.gene045984:CDS
CTCAAGTACTTGTGTCTTGA+AGG	0.385929	5.4:+40956317	MS.gene045984:CDS
GCTTGGCTGTTCACCTATGC+TGG	0.392740	5.4:+40957369	MS.gene045984:CDS
AAAGATTTGGATCTTGAATT+GGG	0.397903	5.4:+40956044	MS.gene045984:CDS
AGACACAAGTACTTGAGGTT+TGG	0.401209	5.4:-40956311	None:intergenic
TATAGGAAGTTGTATCAAAA+TGG	0.403424	5.4:-40955763	None:intergenic
GTGTCTTGAAGGCGAATTCA+AGG	0.439704	5.4:+40956328	MS.gene045984:CDS
CCTAACCTCGAGAGACTTGT+TGG	0.444823	5.4:+40956467	MS.gene045984:CDS
GCCCCGTATGCTGGATATGC+AGG	0.453033	5.4:+40957232	MS.gene045984:CDS
CGCGCAAATGGAGGTACAAA+TGG	0.457385	5.4:+40955814	MS.gene045984:CDS
ACAGATAATTCAACCAAAAG+TGG	0.464776	5.4:-40956371	None:intergenic
ATATCAAATGCCCCGTATGC+TGG	0.466471	5.4:+40957223	MS.gene045984:CDS
CCAACAAGTCTCTCGAGGTT+AGG	0.470137	5.4:-40956467	None:intergenic
GTATGCTGGATATGCAGGTT+TGG	0.474840	5.4:+40957237	MS.gene045984:CDS
GGAAGGTCACTGATCAAATC+AGG	0.475175	5.4:-40955723	None:intergenic
CTTCTCGGTCGGTTGAGTTA+GGG	0.476681	5.4:-40955875	None:intergenic
AGCGATAAGTTCTCCAATAG+AGG	0.480239	5.4:-40956251	None:intergenic
TTGTGAGAAATTGACTCGAT+TGG	0.483936	5.4:+40956106	MS.gene045984:CDS
AGAATCCACTGATTTATAGC+AGG	0.495614	5.4:-40955999	None:intergenic
ATGGTCTCTATAATACTTTG+AGG	0.497744	5.4:-40955744	None:intergenic
TGAGGCTCTCAATCGCTTCA+GGG	0.497841	5.4:-40956217	None:intergenic
CTTTAAGATCATTTCTCGAA+AGG	0.498052	5.4:-40956025	None:intergenic
CTTGGTGAAGAAACAGCAAT+CGG	0.505301	5.4:-40955929	None:intergenic
GAAACTTATGAATTGGCCCT+TGG	0.516791	5.4:-40955947	None:intergenic
CCACTGATTTATAGCAGGGC+AGG	0.516941	5.4:-40955994	None:intergenic
TTGGATCTTGAATTGGGAGA+AGG	0.523444	5.4:+40956050	MS.gene045984:CDS
AAACCTGCATATCCAGCATA+CGG	0.530137	5.4:-40957235	None:intergenic
GAAAATCCCTTAAAACTAGC+AGG	0.533034	5.4:-40956155	None:intergenic
AACCTGCATATCCAGCATAC+GGG	0.537365	5.4:-40957234	None:intergenic
CGATTGCTGTTTCTTCACCA+AGG	0.538739	5.4:+40955930	MS.gene045984:CDS
TTCTTGAAGTATTTGAGCAT+AGG	0.544290	5.4:+40956929	MS.gene045984:intron
GAAAACAAGCTGAGTAATTG+TGG	0.547921	5.4:-40955838	None:intergenic
CAATCCAAATCATACATAGC+AGG	0.556247	5.4:-40957409	None:intergenic
ATACTCATTGTCTCCAGCAT+AGG	0.556521	5.4:-40957382	None:intergenic
GATTGCTGTTTCTTCACCAA+GGG	0.559561	5.4:+40955931	MS.gene045984:CDS
ACTTTATAGCAAGATGCCCT+AGG	0.566074	5.4:-40956958	None:intergenic
TTCAAAATGTTTAATCTCCG+CGG	0.570291	5.4:-40957501	None:intergenic
GAATCCACTGATTTATAGCA+GGG	0.572272	5.4:-40955998	None:intergenic
TTGGTGAAGAAACAGCAATC+GGG	0.577327	5.4:-40955928	None:intergenic
TTTCTGAACAACTTCTCGGT+CGG	0.579864	5.4:-40955886	None:intergenic
CTTCAAGACACAAGTACTTG+AGG	0.580159	5.4:-40956316	None:intergenic
TGAGCATAGGTAATGACCTA+GGG	0.584956	5.4:+40956942	MS.gene045984:CDS
TTGAGCATAGGTAATGACCT+AGG	0.593771	5.4:+40956941	MS.gene045984:CDS
GTATATGACTGACGAGCACA+TGG	0.598121	5.4:+40956400	MS.gene045984:CDS
TCTCTATAATACTTTGAGGA+AGG	0.602499	5.4:-40955740	None:intergenic
ATAGAGGGCAACTTGAAATG+AGG	0.607654	5.4:-40956235	None:intergenic
GCAGAAATTTATTTCATCCG+CGG	0.609867	5.4:+40957484	MS.gene045984:CDS
CTGATAAATTCGATCTCGTG+TGG	0.615498	5.4:-40957340	None:intergenic
GCGATAAGTTCTCCAATAGA+GGG	0.616714	5.4:-40956250	None:intergenic
GAGGCTCTCAATCGCTTCAG+GGG	0.629366	5.4:-40956216	None:intergenic
ACCTGCATATCCAGCATACG+GGG	0.638256	5.4:-40957233	None:intergenic
CCTGCCCTGCTATAAATCAG+TGG	0.647221	5.4:+40955994	MS.gene045984:CDS
TGACCAAGTATAGAATCCGA+AGG	0.648564	5.4:-40957280	None:intergenic
TGGTCTTATTGACTTCACAA+AGG	0.664654	5.4:+40956487	MS.gene045984:CDS
TAAGACCAACAAGTCTCTCG+AGG	0.668237	5.4:-40956472	None:intergenic
GACCAAGTATAGAATCCGAA+GGG	0.669544	5.4:-40957279	None:intergenic
GGATTGTCAATTGAAAATGG+TGG	0.698312	5.4:+40957426	MS.gene045984:CDS
AATCCCTTAAAACTAGCAGG+CGG	0.721464	5.4:-40956152	None:intergenic
GTGAAGTTGACAGAAATGAG+CGG	0.741565	5.4:+40957313	MS.gene045984:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAAAAATATCTAAATTTGT+CGG	-	chr5.4:40956761-40956780	None:intergenic	10.0%
!!	ACATTAAAAAAGTTAATGTA+AGG	+	chr5.4:40956673-40956692	MS.gene045984:intron	15.0%
!!	CATTAAAAAAGTTAATGTAA+GGG	+	chr5.4:40956674-40956693	MS.gene045984:intron	15.0%
!!	TAAAAAATAATGAATTCAGA+GGG	-	chr5.4:40956531-40956550	None:intergenic	15.0%
!!	TTAAAAAATAATGAATTCAG+AGG	-	chr5.4:40956532-40956551	None:intergenic	15.0%
!!!	AAATATTTAAGGTTTATTAC+TGG	+	chr5.4:40957162-40957181	MS.gene045984:intron	15.0%
!!!	TCTATTTAATTTAGTTAAGT+TGG	+	chr5.4:40956812-40956831	MS.gene045984:intron	15.0%
!!	TTTAAAAGAACTTCACATTT+CGG	+	chr5.4:40957075-40957094	MS.gene045984:CDS	20.0%
!!!	ACAATTTGAAACTTATGAAT+TGG	-	chr5.4:40955957-40955976	None:intergenic	20.0%
!!!	ATGTGAAGTTCTTTTAAATT+AGG	-	chr5.4:40957073-40957092	None:intergenic	20.0%
!!!	GTATATTTTCTTACTTGTTA+AGG	+	chr5.4:40956556-40956575	MS.gene045984:intron	20.0%
!!!	TTAACTTTTTTAATGTTGTG+AGG	-	chr5.4:40956669-40956688	None:intergenic	20.0%
!	AAAGATTTGGATCTTGAATT+GGG	+	chr5.4:40956044-40956063	MS.gene045984:CDS	25.0%
!	GAGAAATGATCTTAAAGATT+TGG	+	chr5.4:40956031-40956050	MS.gene045984:CDS	25.0%
!	TAAAGATTTGGATCTTGAAT+TGG	+	chr5.4:40956043-40956062	MS.gene045984:CDS	25.0%
!	TATAGGAAGTTGTATCAAAA+TGG	-	chr5.4:40955766-40955785	None:intergenic	25.0%
!	TTTGGATTGTCAATTGAAAA+TGG	+	chr5.4:40957423-40957442	MS.gene045984:CDS	25.0%
!!	AATGTATCAAGTAAGTTTTG+AGG	+	chr5.4:40957003-40957022	MS.gene045984:CDS	25.0%
!!	GAATTTATCAGATTTTTGCT+TGG	+	chr5.4:40957352-40957371	MS.gene045984:CDS	25.0%
!!!	AGTTAATGTAAGGGTATTTT+TGG	+	chr5.4:40956683-40956702	MS.gene045984:intron	25.0%
!!!	ATGTTTTATGCAATTGACTT+TGG	+	chr5.4:40957185-40957204	MS.gene045984:intron	25.0%
	ACAGATAATTCAACCAAAAG+TGG	-	chr5.4:40956374-40956393	None:intergenic	30.0%
	ATCATTGTGATCAACAAATG+GGG	+	chr5.4:40956864-40956883	MS.gene045984:intron	30.0%
	ATGGTCTCTATAATACTTTG+AGG	-	chr5.4:40955747-40955766	None:intergenic	30.0%
	CATCATTGTGATCAACAAAT+GGG	+	chr5.4:40956863-40956882	MS.gene045984:intron	30.0%
!	AATTTTGTCAAGTTTCTTGG+CGG	+	chr5.4:40956440-40956459	MS.gene045984:CDS	30.0%
!	ATATGCAGGTTTGGATTTTT+GGG	+	chr5.4:40957246-40957265	MS.gene045984:CDS	30.0%
!	TCACAACTAAAAAAGCATGA+CGG	-	chr5.4:40956092-40956111	None:intergenic	30.0%
!	TCTCTATAATACTTTGAGGA+AGG	-	chr5.4:40955743-40955762	None:intergenic	30.0%
!	TGCAATTTTGTCAAGTTTCT+TGG	+	chr5.4:40956437-40956456	MS.gene045984:CDS	30.0%
!	TTCTTGAAGTATTTGAGCAT+AGG	+	chr5.4:40956929-40956948	MS.gene045984:intron	30.0%
!!	CTTTAAGATCATTTCTCGAA+AGG	-	chr5.4:40956028-40956047	None:intergenic	30.0%
	AACGTGCAAAAATGAACTAG+AGG	-	chr5.4:40956911-40956930	None:intergenic	35.0%
	AATAGATACTACTCCGAACT+TGG	-	chr5.4:40956798-40956817	None:intergenic	35.0%
	AGGAGATGACCATTATAACT+AGG	-	chr5.4:40956649-40956668	None:intergenic	35.0%
	CAATCCAAATCATACATAGC+AGG	-	chr5.4:40957412-40957431	None:intergenic	35.0%
	CATTCCTGCTATGTATGATT+TGG	+	chr5.4:40957405-40957424	MS.gene045984:CDS	35.0%
	CCATCATTGTGATCAACAAA+TGG	+	chr5.4:40956862-40956881	MS.gene045984:intron	35.0%
	GAAAACAAGCTGAGTAATTG+TGG	-	chr5.4:40955841-40955860	None:intergenic	35.0%
	GAAAATCCCTTAAAACTAGC+AGG	-	chr5.4:40956158-40956177	None:intergenic	35.0%
	GCAGAAATTTATTTCATCCG+CGG	+	chr5.4:40957484-40957503	MS.gene045984:CDS	35.0%
	GGATTGTCAATTGAAAATGG+TGG	+	chr5.4:40957426-40957445	MS.gene045984:CDS	35.0%
	TATGCTGCAATGAATGAGTA+AGG	-	chr5.4:40957106-40957125	None:intergenic	35.0%
!	CACTTTTCTGAACAACTTCT+CGG	-	chr5.4:40955893-40955912	None:intergenic	35.0%
!	CCATTTGTTGATCACAATGA+TGG	-	chr5.4:40956865-40956884	None:intergenic	35.0%
!	GATATGCAGGTTTGGATTTT+TGG	+	chr5.4:40957245-40957264	MS.gene045984:CDS	35.0%
!	TCTTGTAGATACTCCACTTT+TGG	+	chr5.4:40956358-40956377	MS.gene045984:CDS	35.0%
!	TTATGCAATTGACTTTGGCA+GGG	+	chr5.4:40957190-40957209	MS.gene045984:intron	35.0%
!	TTTATGCAATTGACTTTGGC+AGG	+	chr5.4:40957189-40957208	MS.gene045984:intron	35.0%
!!	AGAATCCACTGATTTATAGC+AGG	-	chr5.4:40956002-40956021	None:intergenic	35.0%
!!	GAATCCACTGATTTATAGCA+GGG	-	chr5.4:40956001-40956020	None:intergenic	35.0%
!!	TGGTCTTATTGACTTCACAA+AGG	+	chr5.4:40956487-40956506	MS.gene045984:CDS	35.0%
!!	TTGTGAGAAATTGACTCGAT+TGG	+	chr5.4:40956106-40956125	MS.gene045984:CDS	35.0%
	AAACCTGCATATCCAGCATA+CGG	-	chr5.4:40957238-40957257	None:intergenic	40.0%
	AATCCCTTAAAACTAGCAGG+CGG	-	chr5.4:40956155-40956174	None:intergenic	40.0%
	ACTTTATAGCAAGATGCCCT+AGG	-	chr5.4:40956961-40956980	None:intergenic	40.0%
	AGACACAAGTACTTGAGGTT+TGG	-	chr5.4:40956314-40956333	None:intergenic	40.0%
	AGCGATAAGTTCTCCAATAG+AGG	-	chr5.4:40956254-40956273	None:intergenic	40.0%
	ATACTCATTGTCTCCAGCAT+AGG	-	chr5.4:40957385-40957404	None:intergenic	40.0%
	ATAGAGGGCAACTTGAAATG+AGG	-	chr5.4:40956238-40956257	None:intergenic	40.0%
	CGACGTACTCCTAGTTATAA+TGG	+	chr5.4:40956637-40956656	MS.gene045984:intron	40.0%
	CTCAAGTACTTGTGTCTTGA+AGG	+	chr5.4:40956317-40956336	MS.gene045984:CDS	40.0%
	CTGATAAATTCGATCTCGTG+TGG	-	chr5.4:40957343-40957362	None:intergenic	40.0%
	CTTACAATCGAGTCCAAGTT+CGG	+	chr5.4:40956782-40956801	MS.gene045984:intron	40.0%
	CTTCAAGACACAAGTACTTG+AGG	-	chr5.4:40956319-40956338	None:intergenic	40.0%
	CTTGGTGAAGAAACAGCAAT+CGG	-	chr5.4:40955932-40955951	None:intergenic	40.0%
	GAAACTTATGAATTGGCCCT+TGG	-	chr5.4:40955950-40955969	None:intergenic	40.0%
	GACCAAGTATAGAATCCGAA+GGG	-	chr5.4:40957282-40957301	None:intergenic	40.0%
	GCGATAAGTTCTCCAATAGA+GGG	-	chr5.4:40956253-40956272	None:intergenic	40.0%
	GTGAAGTTGACAGAAATGAG+CGG	+	chr5.4:40957313-40957332	MS.gene045984:CDS	40.0%
	GTTCTAACAGCGTCTCTTAT+AGG	-	chr5.4:40955783-40955802	None:intergenic	40.0%
	TGACCAAGTATAGAATCCGA+AGG	-	chr5.4:40957283-40957302	None:intergenic	40.0%
	TGAGCATAGGTAATGACCTA+GGG	+	chr5.4:40956942-40956961	MS.gene045984:CDS	40.0%
	TTGAGCATAGGTAATGACCT+AGG	+	chr5.4:40956941-40956960	MS.gene045984:CDS	40.0%
	TTGGATCTTGAATTGGGAGA+AGG	+	chr5.4:40956050-40956069	MS.gene045984:CDS	40.0%
	TTGGGAAAAAGAATGCCCTT+CGG	+	chr5.4:40957264-40957283	MS.gene045984:CDS	40.0%
	TTGGTGAAGAAACAGCAATC+GGG	-	chr5.4:40955931-40955950	None:intergenic	40.0%
	TTTCTGAACAACTTCTCGGT+CGG	-	chr5.4:40955889-40955908	None:intergenic	40.0%
!!	CATTTCAAGTTGCCCTCTAT+TGG	+	chr5.4:40956238-40956257	MS.gene045984:CDS	40.0%
!!	GATTGCTGTTTCTTCACCAA+GGG	+	chr5.4:40955931-40955950	MS.gene045984:CDS	40.0%
!!!	TATCCGCCTGCTAGTTTTAA+GGG	+	chr5.4:40956149-40956168	MS.gene045984:CDS	40.0%
	AACCTGCATATCCAGCATAC+GGG	-	chr5.4:40957237-40957256	None:intergenic	45.0%
	ATATCAAATGCCCCGTATGC+TGG	+	chr5.4:40957223-40957242	MS.gene045984:CDS	45.0%
	GGAAGGTCACTGATCAAATC+AGG	-	chr5.4:40955726-40955745	None:intergenic	45.0%
	GTATATGACTGACGAGCACA+TGG	+	chr5.4:40956400-40956419	MS.gene045984:CDS	45.0%
	GTATGCTGGATATGCAGGTT+TGG	+	chr5.4:40957237-40957256	MS.gene045984:CDS	45.0%
	GTGTCTTGAAGGCGAATTCA+AGG	+	chr5.4:40956328-40956347	MS.gene045984:CDS	45.0%
	TAAGACCAACAAGTCTCTCG+AGG	-	chr5.4:40956475-40956494	None:intergenic	45.0%
	TGCCCTTCGGATTCTATACT+TGG	+	chr5.4:40957277-40957296	MS.gene045984:CDS	45.0%
!	CTAGCATTTTGTCGCGCAAA+TGG	+	chr5.4:40955802-40955821	MS.gene045984:CDS	45.0%
!!	CGATTGCTGTTTCTTCACCA+AGG	+	chr5.4:40955930-40955949	MS.gene045984:CDS	45.0%
!!!	GTATCCGCCTGCTAGTTTTA+AGG	+	chr5.4:40956148-40956167	MS.gene045984:CDS	45.0%
!!	TTAATATAATCAAATATTTA+AGG	+	chr5.4:40957151-40957170	MS.gene045984:intron	5.0%
	ACCTGCATATCCAGCATACG+GGG	-	chr5.4:40957236-40957255	None:intergenic	50.0%
	ACTTCTCGGTCGGTTGAGTT+AGG	-	chr5.4:40955879-40955898	None:intergenic	50.0%
	ATGAGGCTCTCAATCGCTTC+AGG	-	chr5.4:40956221-40956240	None:intergenic	50.0%
	CCAACAAGTCTCTCGAGGTT+AGG	-	chr5.4:40956470-40956489	None:intergenic	50.0%
	CCTAACCTCGAGAGACTTGT+TGG	+	chr5.4:40956467-40956486	MS.gene045984:CDS	50.0%
	CCTGCCCTGCTATAAATCAG+TGG	+	chr5.4:40955994-40956013	MS.gene045984:CDS	50.0%
	CTTCTCGGTCGGTTGAGTTA+GGG	-	chr5.4:40955878-40955897	None:intergenic	50.0%
	TGAGGCTCTCAATCGCTTCA+GGG	-	chr5.4:40956220-40956239	None:intergenic	50.0%
!	CGCGCAAATGGAGGTACAAA+TGG	+	chr5.4:40955814-40955833	MS.gene045984:CDS	50.0%
!	GCATTTTGTCGCGCAAATGG+AGG	+	chr5.4:40955805-40955824	MS.gene045984:CDS	50.0%
!!	CCACTGATTTATAGCAGGGC+AGG	-	chr5.4:40955997-40956016	None:intergenic	50.0%
	GAGGCTCTCAATCGCTTCAG+GGG	-	chr5.4:40956219-40956238	None:intergenic	55.0%
	GCTTGGCTGTTCACCTATGC+TGG	+	chr5.4:40957369-40957388	MS.gene045984:CDS	55.0%
	GCCCCGTATGCTGGATATGC+AGG	+	chr5.4:40957232-40957251	MS.gene045984:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.4	gene	40955705	40957513	40955705	ID=MS.gene045984
chr5.4	mRNA	40955705	40957513	40955705	ID=MS.gene045984.t1;Parent=MS.gene045984
chr5.4	exon	40955705	40956508	40955705	ID=MS.gene045984.t1.exon1;Parent=MS.gene045984.t1
chr5.4	CDS	40955705	40956508	40955705	ID=cds.MS.gene045984.t1;Parent=MS.gene045984.t1
chr5.4	exon	40956938	40957096	40956938	ID=MS.gene045984.t1.exon2;Parent=MS.gene045984.t1
chr5.4	CDS	40956938	40957096	40956938	ID=cds.MS.gene045984.t1;Parent=MS.gene045984.t1
chr5.4	exon	40957211	40957513	40957211	ID=MS.gene045984.t1.exon3;Parent=MS.gene045984.t1
chr5.4	CDS	40957211	40957513	40957211	ID=cds.MS.gene045984.t1;Parent=MS.gene045984.t1

Gene Sequence

>MS.gene045984

ATGGATGATTTTTCGGGTCCTGATTTGATCAGTGACCTTCCTCAAAGTATTATAGAGACCATTTTGATACAACTTCCTATAAGAGACGCTGTTAGAACTAGCATTTTGTCGCGCAAATGGAGGTACAAATGGTCCACAATTACTCAGCTTGTTTTCGACGAAAAATGTTACCCTAACTCAACCGACCGAGAAGTTGTTCAGAAAAGTGTTGTTGAGTTTATTACCCGATTGCTGTTTCTTCACCAAGGGCCAATTCATAAGTTTCAAATTGTGAATACAAGCTTGCAGACCTGCCCTGCTATAAATCAGTGGATTCTTTTCCTTTCGAGAAATGATCTTAAAGATTTGGATCTTGAATTGGGAGAAGGTGAATTCTTTAGAATGCCGTCATGCTTTTTTAGTTGTGAGAAATTGACTCGATTGGAGCTCTCGCGCTGCGAGTTGTATCCGCCTGCTAGTTTTAAGGGATTTTCGTATTTGAAGTGTCTCAATCTTCATCAAGTTTTGATATCCCCTGAAGCGATTGAGAGCCTCATTTCAAGTTGCCCTCTATTGGAGAACTTATCGCTTTCATACTTTGACTGTTTAGCTCTTACTGTACGTGCTCCAAACCTCAAGTACTTGTGTCTTGAAGGCGAATTCAAGGAAATTTGTCTTGTAGATACTCCACTTTTGGTTGAATTATCTGTTGCTATGTATATGACTGACGAGCACATGGAGCAAAGCTCAACTTGCAATTTTGTCAAGTTTCTTGGCGGTGTGCCTAACCTCGAGAGACTTGTTGGTCTTATTGACTTCACAAAGGTAACAGTTTGTTCGTACTCCCTCTGAATTCATTATTTTTTAAACATGTATATTTTCTTACTTGTTAAGGATGATAGTGAAGTGCATTTCATTTTCTTGATTTCATGTAAAAATGAAAATATATTTATCGACGTACTCCTAGTTATAATGGTCATCTCCTCACAACATTAAAAAAGTTAATGTAAGGGTATTTTTGGAATAATACTTTAAAATGTGTATAGATTAGTTAGCAATTGCTTATATTTGAATCCGACAAATTTAGATATTTTTTTGCTTACAATCGAGTCCAAGTTCGGAGTAGTATCTATTTAATTTAGTTAAGTTGGTTAACACTACTTTTGCATATAGTTTTACCATCATTGTGATCAACAAATGGGGTGTTCTGTTATGTTTGTCTAACCTCTAGTTCATTTTTGCACGTTCTTGAAGTATTTGAGCATAGGTAATGACCTAGGGCATCTTGCTATAAAGTACAACAATTTAGAGACTATTGAAATGTATCAAGTAAGTTTTGAGGATATGAAAGAAATACTTGTCGTCTTTCGCTTGATTACAAGCTCTCCTAATTTAAAAGAACTTCACATTTCGGTAAGTCCTTACTCATTCATTGCAGCATAGTTCAGTTGTTATTTTTAAATATCATTAATATAATCAAATATTTAAGGTTTATTACTGGATGTTTTATGCAATTGACTTTGGCAGGGTTCATCAAACATATCAAATGCCCCGTATGCTGGATATGCAGGTTTGGATTTTTGGGAAAAAGAATGCCCTTCGGATTCTATACTTGGTCAGCTTAAACTTGTGAAGTTGACAGAAATGAGCGGTATGCCACACGAGATCGAATTTATCAGATTTTTGCTTGGCTGTTCACCTATGCTGGAGACAATGAGTATCATTCCTGCTATGTATGATTTGGATTGTCAATTGAAAATGGTGGTCGAACTGATGAAATTTCGAAGAGCTTCTACTAAAGCAGAAATTTATTTCATCCGCGGAGATTAA

Protein sequence

>MS.gene045984.t1

MDDFSGPDLISDLPQSIIETILIQLPIRDAVRTSILSRKWRYKWSTITQLVFDEKCYPNSTDREVVQKSVVEFITRLLFLHQGPIHKFQIVNTSLQTCPAINQWILFLSRNDLKDLDLELGEGEFFRMPSCFFSCEKLTRLELSRCELYPPASFKGFSYLKCLNLHQVLISPEAIESLISSCPLLENLSLSYFDCLALTVRAPNLKYLCLEGEFKEICLVDTPLLVELSVAMYMTDEHMEQSSTCNFVKFLGGVPNLERLVGLIDFTKYLSIGNDLGHLAIKYNNLETIEMYQVSFEDMKEILVVFRLITSSPNLKELHISGSSNISNAPYAGYAGLDFWEKECPSDSILGQLKLVKLTEMSGMPHEIEFIRFLLGCSPMLETMSIIPAMYDLDCQLKMVVELMKFRRASTKAEIYFIRGD