Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89332.t1 | KEH22972.1 | 96.2 | 266 | 10 | 0 | 1 | 266 | 1 | 266 | 2.50E-143 | 518.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89332.t1 | P50165 | 58.8 | 255 | 104 | 1 | 11 | 265 | 10 | 263 | 2.1e-82 | 307.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89332.t1 | A0A072U029 | 96.2 | 266 | 10 | 0 | 1 | 266 | 1 | 266 | 1.8e-143 | 518.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene89332 | 0.821946 | 3.08E-53 | -1.69E-46 |
| MS.gene049171 | MS.gene89332 | 0.83822 | 3.27E-57 | -1.69E-46 |
| MS.gene049173 | MS.gene89332 | 0.845922 | 3.00E-59 | -1.69E-46 |
| MS.gene049217 | MS.gene89332 | 0.869065 | 4.09E-66 | -1.69E-46 |
| MS.gene049222 | MS.gene89332 | 0.876112 | 1.81E-68 | -1.69E-46 |
| MS.gene049285 | MS.gene89332 | 0.886078 | 4.68E-72 | -1.69E-46 |
| MS.gene049320 | MS.gene89332 | 0.888631 | 4.97E-73 | -1.69E-46 |
| MS.gene049369 | MS.gene89332 | 0.805397 | 1.36E-49 | -1.69E-46 |
| MS.gene049427 | MS.gene89332 | 0.809718 | 1.65E-50 | -1.69E-46 |
| MS.gene049609 | MS.gene89332 | 0.859239 | 4.75E-63 | -1.69E-46 |
| MS.gene049611 | MS.gene89332 | -0.832643 | 8.41E-56 | -1.69E-46 |
| MS.gene049614 | MS.gene89332 | 0.832753 | 7.90E-56 | -1.69E-46 |
| MS.gene049627 | MS.gene89332 | 0.810928 | 9.03E-51 | -1.69E-46 |
| MS.gene049661 | MS.gene89332 | 0.802331 | 5.90E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene89332 | 0.86793 | 9.51E-66 | -1.69E-46 |
| MS.gene049828 | MS.gene89332 | 0.816227 | 6.17E-52 | -1.69E-46 |
| MS.gene050076 | MS.gene89332 | 0.805277 | 1.44E-49 | -1.69E-46 |
| MS.gene050083 | MS.gene89332 | -0.800731 | 1.26E-48 | -1.69E-46 |
| MS.gene05010 | MS.gene89332 | 0.823429 | 1.39E-53 | -1.69E-46 |
| MS.gene050163 | MS.gene89332 | 0.879753 | 9.63E-70 | -1.69E-46 |
| MS.gene050165 | MS.gene89332 | 0.867633 | 1.18E-65 | -1.69E-46 |
| MS.gene050333 | MS.gene89332 | 0.869237 | 3.60E-66 | -1.69E-46 |
| MS.gene050353 | MS.gene89332 | -0.844419 | 7.65E-59 | -1.69E-46 |
| MS.gene050432 | MS.gene89332 | 0.807899 | 4.04E-50 | -1.69E-46 |
| MS.gene050444 | MS.gene89332 | 0.831922 | 1.27E-55 | -1.69E-46 |
| MS.gene050504 | MS.gene89332 | 0.852908 | 3.39E-61 | -1.69E-46 |
| MS.gene050518 | MS.gene89332 | 0.832369 | 9.83E-56 | -1.69E-46 |
| MS.gene050538 | MS.gene89332 | 0.806657 | 7.40E-50 | -1.69E-46 |
| MS.gene050612 | MS.gene89332 | 0.853659 | 2.06E-61 | -1.69E-46 |
| MS.gene050675 | MS.gene89332 | 0.833503 | 5.14E-56 | -1.69E-46 |
| MS.gene050686 | MS.gene89332 | 0.806931 | 6.47E-50 | -1.69E-46 |
| MS.gene050699 | MS.gene89332 | 0.846726 | 1.81E-59 | -1.69E-46 |
| MS.gene050747 | MS.gene89332 | 0.84816 | 7.32E-60 | -1.69E-46 |
| MS.gene050767 | MS.gene89332 | 0.855522 | 5.96E-62 | -1.69E-46 |
| MS.gene050770 | MS.gene89332 | 0.858192 | 9.75E-63 | -1.69E-46 |
| MS.gene050772 | MS.gene89332 | 0.893594 | 5.44E-75 | -1.69E-46 |
| MS.gene05079 | MS.gene89332 | -0.801376 | 9.27E-49 | -1.69E-46 |
| MS.gene05080 | MS.gene89332 | 0.80407 | 2.58E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene89332 | 0.806213 | 9.17E-50 | -1.69E-46 |
| MS.gene050871 | MS.gene89332 | 0.804571 | 2.03E-49 | -1.69E-46 |
| MS.gene050950 | MS.gene89332 | 0.841532 | 4.49E-58 | -1.69E-46 |
| MS.gene050986 | MS.gene89332 | 0.837991 | 3.75E-57 | -1.69E-46 |
| MS.gene05100 | MS.gene89332 | 0.877252 | 7.29E-69 | -1.69E-46 |
| MS.gene05104 | MS.gene89332 | -0.813409 | 2.60E-51 | -1.69E-46 |
| MS.gene051113 | MS.gene89332 | -0.807002 | 6.25E-50 | -1.69E-46 |
| MS.gene051228 | MS.gene89332 | 0.879071 | 1.68E-69 | -1.69E-46 |
| MS.gene051387 | MS.gene89332 | 0.800249 | 1.57E-48 | -1.69E-46 |
| MS.gene051551 | MS.gene89332 | 0.829075 | 6.31E-55 | -1.69E-46 |
| MS.gene051564 | MS.gene89332 | 0.822126 | 2.80E-53 | -1.69E-46 |
| MS.gene051566 | MS.gene89332 | 0.824017 | 1.01E-53 | -1.69E-46 |
| MS.gene051666 | MS.gene89332 | 0.838114 | 3.48E-57 | -1.69E-46 |
| MS.gene051692 | MS.gene89332 | 0.830952 | 2.20E-55 | -1.69E-46 |
| MS.gene051694 | MS.gene89332 | 0.872264 | 3.63E-67 | -1.69E-46 |
| MS.gene051810 | MS.gene89332 | 0.878035 | 3.89E-69 | -1.69E-46 |
| MS.gene051858 | MS.gene89332 | 0.862861 | 3.75E-64 | -1.69E-46 |
| MS.gene051949 | MS.gene89332 | 0.83716 | 6.12E-57 | -1.69E-46 |
| MS.gene052164 | MS.gene89332 | 0.829275 | 5.64E-55 | -1.69E-46 |
| MS.gene052271 | MS.gene89332 | 0.869006 | 4.28E-66 | -1.69E-46 |
| MS.gene052290 | MS.gene89332 | 0.862965 | 3.49E-64 | -1.69E-46 |
| MS.gene052322 | MS.gene89332 | 0.821321 | 4.30E-53 | -1.69E-46 |
| MS.gene052379 | MS.gene89332 | 0.872346 | 3.41E-67 | -1.69E-46 |
| MS.gene052421 | MS.gene89332 | 0.816109 | 6.55E-52 | -1.69E-46 |
| MS.gene052484 | MS.gene89332 | 0.809502 | 1.83E-50 | -1.69E-46 |
| MS.gene052503 | MS.gene89332 | 0.81044 | 1.15E-50 | -1.69E-46 |
| MS.gene052615 | MS.gene89332 | 0.852839 | 3.55E-61 | -1.69E-46 |
| MS.gene052670 | MS.gene89332 | 0.816335 | 5.83E-52 | -1.69E-46 |
| MS.gene052823 | MS.gene89332 | 0.803904 | 2.79E-49 | -1.69E-46 |
| MS.gene052870 | MS.gene89332 | 0.807562 | 4.76E-50 | -1.69E-46 |
| MS.gene052872 | MS.gene89332 | 0.815707 | 8.05E-52 | -1.69E-46 |
| MS.gene052916 | MS.gene89332 | 0.855071 | 8.07E-62 | -1.69E-46 |
| MS.gene052966 | MS.gene89332 | 0.810101 | 1.36E-50 | -1.69E-46 |
| MS.gene053009 | MS.gene89332 | 0.872037 | 4.33E-67 | -1.69E-46 |
| MS.gene053018 | MS.gene89332 | 0.802059 | 6.71E-49 | -1.69E-46 |
| MS.gene053103 | MS.gene89332 | 0.840897 | 6.59E-58 | -1.69E-46 |
| MS.gene053104 | MS.gene89332 | 0.850945 | 1.22E-60 | -1.69E-46 |
| MS.gene053203 | MS.gene89332 | 0.815539 | 8.78E-52 | -1.69E-46 |
| MS.gene053207 | MS.gene89332 | 0.864296 | 1.35E-64 | -1.69E-46 |
| MS.gene053213 | MS.gene89332 | 0.893808 | 4.45E-75 | -1.69E-46 |
| MS.gene053286 | MS.gene89332 | 0.887839 | 1.00E-72 | -1.69E-46 |
| MS.gene053322 | MS.gene89332 | 0.879191 | 1.52E-69 | -1.69E-46 |
| MS.gene053436 | MS.gene89332 | 0.825468 | 4.61E-54 | -1.69E-46 |
| MS.gene053561 | MS.gene89332 | -0.811299 | 7.50E-51 | -1.69E-46 |
| MS.gene053574 | MS.gene89332 | 0.850994 | 1.18E-60 | -1.69E-46 |
| MS.gene053632 | MS.gene89332 | 0.890346 | 1.07E-73 | -1.69E-46 |
| MS.gene053824 | MS.gene89332 | 0.811888 | 5.59E-51 | -1.69E-46 |
| MS.gene053915 | MS.gene89332 | 0.802737 | 4.87E-49 | -1.69E-46 |
| MS.gene053916 | MS.gene89332 | 0.861534 | 9.59E-64 | -1.69E-46 |
| MS.gene054376 | MS.gene89332 | 0.832778 | 7.79E-56 | -1.69E-46 |
| MS.gene054408 | MS.gene89332 | 0.832193 | 1.09E-55 | -1.69E-46 |
| MS.gene054595 | MS.gene89332 | 0.81815 | 2.28E-52 | -1.69E-46 |
| MS.gene054600 | MS.gene89332 | 0.868828 | 4.89E-66 | -1.69E-46 |
| MS.gene054642 | MS.gene89332 | 0.903642 | 2.81E-79 | -1.69E-46 |
| MS.gene054802 | MS.gene89332 | 0.841135 | 5.71E-58 | -1.69E-46 |
| MS.gene054803 | MS.gene89332 | 0.836897 | 7.15E-57 | -1.69E-46 |
| MS.gene054804 | MS.gene89332 | 0.84275 | 2.14E-58 | -1.69E-46 |
| MS.gene054927 | MS.gene89332 | 0.815489 | 9.01E-52 | -1.69E-46 |
| MS.gene054954 | MS.gene89332 | 0.849399 | 3.32E-60 | -1.69E-46 |
| MS.gene05505 | MS.gene89332 | 0.865969 | 4.01E-65 | -1.69E-46 |
| MS.gene055154 | MS.gene89332 | -0.8267 | 2.35E-54 | -1.69E-46 |
| MS.gene055206 | MS.gene89332 | 0.835301 | 1.82E-56 | -1.69E-46 |
| MS.gene055212 | MS.gene89332 | 0.879013 | 1.76E-69 | -1.69E-46 |
| MS.gene055254 | MS.gene89332 | 0.872329 | 3.46E-67 | -1.69E-46 |
| MS.gene055289 | MS.gene89332 | 0.850389 | 1.75E-60 | -1.69E-46 |
| MS.gene055362 | MS.gene89332 | 0.895252 | 1.14E-75 | -1.69E-46 |
| MS.gene055397 | MS.gene89332 | 0.844993 | 5.36E-59 | -1.69E-46 |
| MS.gene055499 | MS.gene89332 | 0.889873 | 1.64E-73 | -1.69E-46 |
| MS.gene055502 | MS.gene89332 | 0.854739 | 1.01E-61 | -1.69E-46 |
| MS.gene055577 | MS.gene89332 | 0.837458 | 5.14E-57 | -1.69E-46 |
| MS.gene055636 | MS.gene89332 | 0.818796 | 1.63E-52 | -1.69E-46 |
| MS.gene055638 | MS.gene89332 | 0.822226 | 2.65E-53 | -1.69E-46 |
| MS.gene055647 | MS.gene89332 | 0.824303 | 8.68E-54 | -1.69E-46 |
| MS.gene055722 | MS.gene89332 | 0.874788 | 5.14E-68 | -1.69E-46 |
| MS.gene05592 | MS.gene89332 | 0.868722 | 5.28E-66 | -1.69E-46 |
| MS.gene055941 | MS.gene89332 | 0.836519 | 8.92E-57 | -1.69E-46 |
| MS.gene055956 | MS.gene89332 | -0.816763 | 4.68E-52 | -1.69E-46 |
| MS.gene056083 | MS.gene89332 | 0.871594 | 6.07E-67 | -1.69E-46 |
| MS.gene056374 | MS.gene89332 | 0.880372 | 5.80E-70 | -1.69E-46 |
| MS.gene056410 | MS.gene89332 | 0.800247 | 1.58E-48 | -1.69E-46 |
| MS.gene056448 | MS.gene89332 | 0.82192 | 3.12E-53 | -1.69E-46 |
| MS.gene056449 | MS.gene89332 | 0.814549 | 1.46E-51 | -1.69E-46 |
| MS.gene056487 | MS.gene89332 | 0.836571 | 8.65E-57 | -1.69E-46 |
| MS.gene056504 | MS.gene89332 | 0.822348 | 2.49E-53 | -1.69E-46 |
| MS.gene056510 | MS.gene89332 | 0.819336 | 1.23E-52 | -1.69E-46 |
| MS.gene056549 | MS.gene89332 | 0.801501 | 8.74E-49 | -1.69E-46 |
| MS.gene056609 | MS.gene89332 | 0.80645 | 8.18E-50 | -1.69E-46 |
| MS.gene056611 | MS.gene89332 | 0.811057 | 8.47E-51 | -1.69E-46 |
| MS.gene056657 | MS.gene89332 | 0.895198 | 1.20E-75 | -1.69E-46 |
| MS.gene056692 | MS.gene89332 | 0.821641 | 3.62E-53 | -1.69E-46 |
| MS.gene056897 | MS.gene89332 | 0.807533 | 4.82E-50 | -1.69E-46 |
| MS.gene056942 | MS.gene89332 | 0.81689 | 4.38E-52 | -1.69E-46 |
| MS.gene057076 | MS.gene89332 | 0.805065 | 1.60E-49 | -1.69E-46 |
| MS.gene057129 | MS.gene89332 | 0.888366 | 6.29E-73 | -1.69E-46 |
| MS.gene057146 | MS.gene89332 | 0.837625 | 4.65E-57 | -1.69E-46 |
| MS.gene057246 | MS.gene89332 | 0.819377 | 1.20E-52 | -1.69E-46 |
| MS.gene057295 | MS.gene89332 | 0.801945 | 7.09E-49 | -1.69E-46 |
| MS.gene057331 | MS.gene89332 | 0.837724 | 4.39E-57 | -1.69E-46 |
| MS.gene057416 | MS.gene89332 | 0.886107 | 4.56E-72 | -1.69E-46 |
| MS.gene057831 | MS.gene89332 | 0.805814 | 1.11E-49 | -1.69E-46 |
| MS.gene057926 | MS.gene89332 | 0.841307 | 5.14E-58 | -1.69E-46 |
| MS.gene058006 | MS.gene89332 | 0.824078 | 9.81E-54 | -1.69E-46 |
| MS.gene058019 | MS.gene89332 | 0.806557 | 7.76E-50 | -1.69E-46 |
| MS.gene058130 | MS.gene89332 | 0.81148 | 6.85E-51 | -1.69E-46 |
| MS.gene058323 | MS.gene89332 | 0.850687 | 1.45E-60 | -1.69E-46 |
| MS.gene058419 | MS.gene89332 | 0.881439 | 2.40E-70 | -1.69E-46 |
| MS.gene058544 | MS.gene89332 | 0.853499 | 2.29E-61 | -1.69E-46 |
| MS.gene058723 | MS.gene89332 | 0.876932 | 9.42E-69 | -1.69E-46 |
| MS.gene058773 | MS.gene89332 | 0.886761 | 2.58E-72 | -1.69E-46 |
| MS.gene058838 | MS.gene89332 | 0.824617 | 7.32E-54 | -1.69E-46 |
| MS.gene05883 | MS.gene89332 | 0.809005 | 2.34E-50 | -1.69E-46 |
| MS.gene058840 | MS.gene89332 | -0.818876 | 1.56E-52 | -1.69E-46 |
| MS.gene059022 | MS.gene89332 | 0.886365 | 3.64E-72 | -1.69E-46 |
| MS.gene059023 | MS.gene89332 | 0.815556 | 8.70E-52 | -1.69E-46 |
| MS.gene059029 | MS.gene89332 | 0.853941 | 1.71E-61 | -1.69E-46 |
| MS.gene05913 | MS.gene89332 | 0.833406 | 5.43E-56 | -1.69E-46 |
| MS.gene05934 | MS.gene89332 | 0.824423 | 8.14E-54 | -1.69E-46 |
| MS.gene059536 | MS.gene89332 | 0.863347 | 2.66E-64 | -1.69E-46 |
| MS.gene059677 | MS.gene89332 | 0.887592 | 1.25E-72 | -1.69E-46 |
| MS.gene059711 | MS.gene89332 | 0.813967 | 1.96E-51 | -1.69E-46 |
| MS.gene059718 | MS.gene89332 | 0.889265 | 2.83E-73 | -1.69E-46 |
| MS.gene059801 | MS.gene89332 | 0.808129 | 3.60E-50 | -1.69E-46 |
| MS.gene059865 | MS.gene89332 | 0.827835 | 1.26E-54 | -1.69E-46 |
| MS.gene059902 | MS.gene89332 | 0.868342 | 7.01E-66 | -1.69E-46 |
| MS.gene059960 | MS.gene89332 | 0.853242 | 2.72E-61 | -1.69E-46 |
| MS.gene060341 | MS.gene89332 | 0.824155 | 9.41E-54 | -1.69E-46 |
| MS.gene060356 | MS.gene89332 | 0.802853 | 4.61E-49 | -1.69E-46 |
| MS.gene060482 | MS.gene89332 | 0.847949 | 8.37E-60 | -1.69E-46 |
| MS.gene060703 | MS.gene89332 | 0.802293 | 6.01E-49 | -1.69E-46 |
| MS.gene060728 | MS.gene89332 | 0.828166 | 1.05E-54 | -1.69E-46 |
| MS.gene06074 | MS.gene89332 | -0.819781 | 9.70E-53 | -1.69E-46 |
| MS.gene060762 | MS.gene89332 | 0.858823 | 6.32E-63 | -1.69E-46 |
| MS.gene06077 | MS.gene89332 | 0.831852 | 1.32E-55 | -1.69E-46 |
| MS.gene060804 | MS.gene89332 | 0.859994 | 2.81E-63 | -1.69E-46 |
| MS.gene060818 | MS.gene89332 | 0.855155 | 7.63E-62 | -1.69E-46 |
| MS.gene060837 | MS.gene89332 | 0.810613 | 1.06E-50 | -1.69E-46 |
| MS.gene06092 | MS.gene89332 | 0.836544 | 8.80E-57 | -1.69E-46 |
| MS.gene061041 | MS.gene89332 | 0.864648 | 1.04E-64 | -1.69E-46 |
| MS.gene061134 | MS.gene89332 | 0.836974 | 6.83E-57 | -1.69E-46 |
| MS.gene061150 | MS.gene89332 | 0.862034 | 6.74E-64 | -1.69E-46 |
| MS.gene061171 | MS.gene89332 | 0.815949 | 7.11E-52 | -1.69E-46 |
| MS.gene061200 | MS.gene89332 | 0.882153 | 1.32E-70 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89332.t1 | MTR_7g063260 | 96.241 | 266 | 10 | 0 | 1 | 266 | 1 | 266 | 0.0 | 535 |
| MS.gene89332.t1 | MTR_7g063270 | 90.602 | 266 | 24 | 1 | 1 | 266 | 1 | 265 | 0.0 | 500 |
| MS.gene89332.t1 | MTR_7g063390 | 77.358 | 265 | 60 | 0 | 1 | 265 | 1 | 265 | 1.27e-152 | 426 |
| MS.gene89332.t1 | MTR_7g063360 | 76.226 | 265 | 63 | 0 | 1 | 265 | 1 | 265 | 5.13e-148 | 414 |
| MS.gene89332.t1 | MTR_7g063330 | 69.925 | 266 | 78 | 2 | 1 | 266 | 1 | 264 | 4.21e-139 | 392 |
| MS.gene89332.t1 | MTR_7g063320 | 72.348 | 264 | 72 | 1 | 1 | 264 | 1 | 263 | 6.96e-138 | 389 |
| MS.gene89332.t1 | MTR_7g063270 | 73.308 | 266 | 21 | 2 | 1 | 266 | 1 | 216 | 2.70e-135 | 380 |
| MS.gene89332.t1 | MTR_3g068070 | 59.696 | 263 | 102 | 1 | 3 | 265 | 2 | 260 | 5.94e-109 | 316 |
| MS.gene89332.t1 | MTR_4g064883 | 58.140 | 258 | 98 | 2 | 11 | 265 | 9 | 259 | 1.66e-107 | 312 |
| MS.gene89332.t1 | MTR_4g064887 | 55.263 | 266 | 112 | 3 | 1 | 265 | 1 | 260 | 3.14e-102 | 298 |
| MS.gene89332.t1 | MTR_3g068155 | 55.985 | 259 | 110 | 1 | 7 | 265 | 10 | 264 | 6.23e-102 | 298 |
| MS.gene89332.t1 | MTR_3g068065 | 58.964 | 251 | 99 | 1 | 16 | 266 | 17 | 263 | 3.69e-101 | 296 |
| MS.gene89332.t1 | MTR_3g068085 | 58.400 | 250 | 100 | 1 | 16 | 265 | 15 | 260 | 4.94e-101 | 296 |
| MS.gene89332.t1 | MTR_3g068175 | 53.788 | 264 | 118 | 1 | 2 | 265 | 3 | 262 | 7.86e-98 | 288 |
| MS.gene89332.t1 | MTR_3g068175 | 52.985 | 268 | 118 | 2 | 2 | 265 | 3 | 266 | 1.36e-95 | 282 |
| MS.gene89332.t1 | MTR_4g064883 | 59.314 | 204 | 83 | 0 | 11 | 214 | 9 | 212 | 1.14e-87 | 259 |
| MS.gene89332.t1 | MTR_4g064887 | 54.717 | 212 | 95 | 1 | 1 | 212 | 1 | 211 | 3.95e-82 | 246 |
| MS.gene89332.t1 | MTR_4g132850 | 34.100 | 261 | 151 | 7 | 12 | 266 | 5 | 250 | 1.05e-31 | 117 |
| MS.gene89332.t1 | MTR_4g131740 | 32.296 | 257 | 158 | 6 | 16 | 263 | 40 | 289 | 5.13e-28 | 108 |
| MS.gene89332.t1 | MTR_7g094510 | 32.031 | 256 | 160 | 6 | 16 | 264 | 6 | 254 | 2.72e-27 | 106 |
| MS.gene89332.t1 | MTR_7g094520 | 31.801 | 261 | 154 | 8 | 16 | 264 | 11 | 259 | 1.24e-24 | 99.4 |
| MS.gene89332.t1 | MTR_7g113650 | 31.907 | 257 | 158 | 8 | 16 | 263 | 40 | 288 | 1.27e-24 | 100 |
| MS.gene89332.t1 | MTR_8g442750 | 28.897 | 263 | 160 | 6 | 16 | 263 | 14 | 264 | 1.23e-23 | 97.4 |
| MS.gene89332.t1 | MTR_1g082760 | 30.350 | 257 | 162 | 8 | 16 | 263 | 40 | 288 | 3.65e-23 | 96.3 |
| MS.gene89332.t1 | MTR_1g068955 | 31.395 | 258 | 156 | 6 | 16 | 262 | 14 | 261 | 1.55e-22 | 94.4 |
| MS.gene89332.t1 | MTR_3g085740 | 29.435 | 248 | 158 | 6 | 22 | 263 | 81 | 317 | 2.65e-21 | 91.7 |
| MS.gene89332.t1 | MTR_7g080410 | 28.780 | 205 | 142 | 4 | 4 | 204 | 26 | 230 | 1.17e-19 | 86.7 |
| MS.gene89332.t1 | MTR_7g080410 | 28.780 | 205 | 142 | 4 | 4 | 204 | 26 | 230 | 1.45e-19 | 86.7 |
| MS.gene89332.t1 | MTR_4g058810 | 26.744 | 258 | 176 | 7 | 16 | 265 | 11 | 263 | 3.41e-19 | 85.1 |
| MS.gene89332.t1 | MTR_4g058840 | 27.237 | 257 | 176 | 6 | 16 | 265 | 11 | 263 | 5.22e-19 | 84.3 |
| MS.gene89332.t1 | MTR_4g058820 | 27.237 | 257 | 176 | 6 | 16 | 265 | 11 | 263 | 5.22e-19 | 84.3 |
| MS.gene89332.t1 | MTR_6g023910 | 28.625 | 269 | 179 | 8 | 1 | 264 | 1 | 261 | 9.30e-17 | 78.2 |
| MS.gene89332.t1 | MTR_1196s0010 | 28.629 | 248 | 160 | 6 | 21 | 264 | 279 | 513 | 1.28e-16 | 79.3 |
| MS.gene89332.t1 | MTR_4g052350 | 29.304 | 273 | 170 | 10 | 1 | 265 | 1 | 258 | 1.80e-16 | 77.4 |
| MS.gene89332.t1 | MTR_6g023610 | 27.306 | 271 | 180 | 9 | 1 | 264 | 1 | 261 | 2.42e-15 | 74.3 |
| MS.gene89332.t1 | MTR_7g071680 | 29.123 | 285 | 174 | 9 | 3 | 266 | 18 | 295 | 4.41e-15 | 73.9 |
| MS.gene89332.t1 | MTR_6g023990 | 28.261 | 276 | 172 | 10 | 1 | 264 | 1 | 262 | 9.78e-15 | 72.4 |
| MS.gene89332.t1 | MTR_4g052320 | 27.953 | 254 | 171 | 6 | 16 | 265 | 8 | 253 | 1.11e-14 | 72.4 |
| MS.gene89332.t1 | MTR_4g052340 | 26.800 | 250 | 172 | 6 | 16 | 262 | 14 | 255 | 1.57e-14 | 72.0 |
| MS.gene89332.t1 | MTR_8g044240 | 27.638 | 199 | 134 | 5 | 16 | 205 | 69 | 266 | 2.20e-14 | 72.4 |
| MS.gene89332.t1 | MTR_7g083870 | 27.336 | 289 | 177 | 10 | 3 | 266 | 8 | 288 | 4.94e-14 | 70.9 |
| MS.gene89332.t1 | MTR_4g058830 | 30.323 | 155 | 98 | 5 | 116 | 265 | 60 | 209 | 1.47e-13 | 68.6 |
| MS.gene89332.t1 | MTR_4g052300 | 27.165 | 254 | 172 | 6 | 16 | 265 | 8 | 252 | 1.47e-13 | 69.3 |
| MS.gene89332.t1 | MTR_7g107670 | 28.571 | 259 | 171 | 6 | 16 | 266 | 33 | 285 | 6.42e-13 | 67.8 |
| MS.gene89332.t1 | MTR_7g105590 | 27.660 | 188 | 131 | 3 | 16 | 201 | 8 | 192 | 1.68e-12 | 65.1 |
| MS.gene89332.t1 | MTR_4g078630 | 27.692 | 260 | 173 | 6 | 16 | 266 | 19 | 272 | 2.86e-12 | 65.9 |
| MS.gene89332.t1 | MTR_3g086210 | 29.224 | 219 | 139 | 7 | 17 | 223 | 52 | 266 | 4.61e-12 | 65.5 |
| MS.gene89332.t1 | MTR_3g020670 | 29.502 | 261 | 167 | 6 | 16 | 265 | 16 | 270 | 8.21e-12 | 64.3 |
| MS.gene89332.t1 | MTR_7g110160 | 28.516 | 256 | 157 | 7 | 13 | 265 | 3 | 235 | 1.15e-11 | 63.5 |
| MS.gene89332.t1 | MTR_6g041980 | 27.907 | 172 | 110 | 5 | 18 | 181 | 66 | 231 | 3.65e-11 | 62.8 |
| MS.gene89332.t1 | MTR_6g041980 | 27.907 | 172 | 110 | 5 | 18 | 181 | 66 | 231 | 3.95e-11 | 62.4 |
| MS.gene89332.t1 | MTR_1g051165 | 22.348 | 264 | 185 | 8 | 16 | 265 | 14 | 271 | 8.36e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89332.t1 | AT5G06060 | 58.039 | 255 | 103 | 1 | 11 | 265 | 4 | 254 | 1.29e-106 | 310 |
| MS.gene89332.t1 | AT1G07440 | 57.422 | 256 | 104 | 3 | 10 | 265 | 6 | 256 | 1.34e-103 | 302 |
| MS.gene89332.t1 | AT2G29260 | 57.087 | 254 | 105 | 1 | 12 | 265 | 64 | 313 | 8.17e-102 | 300 |
| MS.gene89332.t1 | AT2G29320 | 58.621 | 261 | 94 | 5 | 11 | 265 | 7 | 259 | 2.99e-101 | 296 |
| MS.gene89332.t1 | AT2G29290 | 56.078 | 255 | 108 | 1 | 11 | 265 | 2 | 252 | 1.00e-100 | 295 |
| MS.gene89332.t1 | AT2G29300 | 57.692 | 260 | 97 | 4 | 11 | 265 | 2 | 253 | 4.37e-100 | 293 |
| MS.gene89332.t1 | AT2G29300 | 57.692 | 260 | 97 | 4 | 11 | 265 | 2 | 253 | 2.05e-99 | 292 |
| MS.gene89332.t1 | AT2G29350 | 57.422 | 256 | 104 | 2 | 10 | 265 | 9 | 259 | 3.46e-99 | 291 |
| MS.gene89332.t1 | AT2G29340 | 56.471 | 255 | 107 | 2 | 11 | 265 | 2 | 252 | 5.27e-99 | 290 |
| MS.gene89332.t1 | AT2G29340 | 56.471 | 255 | 107 | 2 | 11 | 265 | 2 | 252 | 1.55e-98 | 291 |
| MS.gene89332.t1 | AT2G29310 | 56.471 | 255 | 107 | 2 | 11 | 265 | 2 | 252 | 2.33e-98 | 289 |
| MS.gene89332.t1 | AT2G29150 | 56.274 | 263 | 110 | 3 | 1 | 263 | 1 | 258 | 8.03e-98 | 288 |
| MS.gene89332.t1 | AT2G29360 | 55.056 | 267 | 112 | 5 | 1 | 265 | 1 | 261 | 4.77e-97 | 286 |
| MS.gene89332.t1 | AT2G30670 | 54.297 | 256 | 111 | 2 | 11 | 265 | 2 | 252 | 4.65e-96 | 283 |
| MS.gene89332.t1 | AT2G29330 | 54.902 | 255 | 111 | 2 | 11 | 265 | 2 | 252 | 1.23e-95 | 281 |
| MS.gene89332.t1 | AT1G07450 | 55.118 | 254 | 109 | 3 | 12 | 265 | 4 | 252 | 1.08e-94 | 279 |
| MS.gene89332.t1 | AT2G29370 | 54.231 | 260 | 112 | 3 | 8 | 265 | 7 | 261 | 3.63e-93 | 276 |
| MS.gene89332.t1 | AT2G29320 | 56.904 | 239 | 90 | 4 | 32 | 265 | 11 | 241 | 3.64e-89 | 265 |
| MS.gene89332.t1 | AT2G29290 | 53.648 | 233 | 104 | 1 | 33 | 265 | 7 | 235 | 4.56e-86 | 257 |
| MS.gene89332.t1 | AT2G29310 | 54.274 | 234 | 103 | 2 | 32 | 265 | 21 | 250 | 4.21e-84 | 252 |
| MS.gene89332.t1 | AT2G29350 | 55.556 | 225 | 95 | 2 | 41 | 265 | 2 | 221 | 3.06e-82 | 246 |
| MS.gene89332.t1 | AT2G29320 | 60.000 | 205 | 72 | 4 | 11 | 209 | 7 | 207 | 2.63e-80 | 241 |
| MS.gene89332.t1 | AT2G29340 | 56.219 | 201 | 88 | 0 | 11 | 211 | 2 | 202 | 7.71e-79 | 237 |
| MS.gene89332.t1 | AT2G29340 | 56.219 | 201 | 88 | 0 | 11 | 211 | 2 | 202 | 7.71e-79 | 237 |
| MS.gene89332.t1 | AT2G29350 | 57.500 | 200 | 85 | 0 | 10 | 209 | 9 | 208 | 1.96e-78 | 237 |
| MS.gene89332.t1 | AT2G29310 | 57.000 | 200 | 86 | 0 | 11 | 210 | 2 | 201 | 4.66e-78 | 235 |
| MS.gene89332.t1 | AT1G07440 | 55.621 | 169 | 75 | 0 | 10 | 178 | 6 | 174 | 3.74e-64 | 199 |
| MS.gene89332.t1 | AT2G29310 | 54.190 | 179 | 82 | 0 | 32 | 210 | 21 | 199 | 1.71e-63 | 197 |
| MS.gene89332.t1 | AT2G29170 | 63.542 | 96 | 34 | 1 | 8 | 102 | 7 | 102 | 1.03e-39 | 134 |
| MS.gene89332.t1 | AT3G03980 | 32.963 | 270 | 164 | 4 | 7 | 264 | 5 | 269 | 3.23e-34 | 125 |
| MS.gene89332.t1 | AT4G05530 | 33.730 | 252 | 158 | 6 | 16 | 266 | 9 | 252 | 1.57e-31 | 117 |
| MS.gene89332.t1 | AT5G18210 | 32.819 | 259 | 159 | 5 | 15 | 264 | 7 | 259 | 4.65e-31 | 116 |
| MS.gene89332.t1 | AT3G05260 | 36.328 | 256 | 147 | 7 | 16 | 263 | 37 | 284 | 1.60e-30 | 115 |
| MS.gene89332.t1 | AT1G54870 | 33.852 | 257 | 153 | 8 | 16 | 263 | 82 | 330 | 1.97e-29 | 114 |
| MS.gene89332.t1 | AT1G54870 | 33.852 | 257 | 153 | 8 | 16 | 263 | 84 | 332 | 2.22e-29 | 113 |
| MS.gene89332.t1 | AT5G18210 | 33.333 | 240 | 145 | 5 | 15 | 245 | 7 | 240 | 1.14e-27 | 107 |
| MS.gene89332.t1 | AT4G13180 | 32.031 | 256 | 160 | 5 | 16 | 264 | 13 | 261 | 3.01e-26 | 103 |
| MS.gene89332.t1 | AT3G04000 | 32.593 | 270 | 164 | 4 | 7 | 263 | 5 | 269 | 1.08e-24 | 99.8 |
| MS.gene89332.t1 | AT1G24360 | 33.065 | 248 | 149 | 9 | 22 | 263 | 80 | 316 | 1.99e-24 | 100 |
| MS.gene89332.t1 | AT3G12800 | 28.137 | 263 | 163 | 5 | 16 | 263 | 10 | 261 | 5.40e-24 | 98.6 |
| MS.gene89332.t1 | AT3G03330 | 29.949 | 197 | 133 | 3 | 12 | 203 | 37 | 233 | 2.59e-19 | 86.3 |
| MS.gene89332.t1 | AT3G55310 | 25.769 | 260 | 176 | 8 | 16 | 265 | 17 | 269 | 8.07e-18 | 81.3 |
| MS.gene89332.t1 | AT3G55290 | 26.236 | 263 | 171 | 9 | 16 | 265 | 17 | 269 | 9.28e-18 | 81.3 |
| MS.gene89332.t1 | AT3G55290 | 26.236 | 263 | 171 | 9 | 16 | 265 | 18 | 270 | 9.89e-18 | 81.3 |
| MS.gene89332.t1 | AT3G46170 | 26.641 | 259 | 175 | 9 | 16 | 265 | 26 | 278 | 1.03e-17 | 81.3 |
| MS.gene89332.t1 | AT1G63380 | 25.483 | 259 | 179 | 9 | 16 | 265 | 17 | 270 | 2.09e-17 | 80.1 |
| MS.gene89332.t1 | AT1G63380 | 25.483 | 259 | 179 | 9 | 16 | 265 | 15 | 268 | 2.41e-17 | 80.1 |
| MS.gene89332.t1 | AT1G63380 | 25.483 | 259 | 179 | 9 | 16 | 265 | 19 | 272 | 2.44e-17 | 80.1 |
| MS.gene89332.t1 | AT1G63380 | 25.483 | 259 | 179 | 9 | 16 | 265 | 22 | 275 | 3.48e-17 | 79.7 |
| MS.gene89332.t1 | AT1G62610 | 23.938 | 259 | 183 | 7 | 16 | 265 | 14 | 267 | 5.34e-16 | 76.3 |
| MS.gene89332.t1 | AT1G62610 | 23.938 | 259 | 183 | 7 | 16 | 265 | 19 | 272 | 5.45e-16 | 76.3 |
| MS.gene89332.t1 | AT1G62610 | 23.938 | 259 | 183 | 7 | 16 | 265 | 13 | 266 | 5.71e-16 | 76.3 |
| MS.gene89332.t1 | AT1G62610 | 23.938 | 259 | 183 | 7 | 16 | 265 | 15 | 268 | 5.79e-16 | 76.3 |
| MS.gene89332.t1 | AT2G17845 | 24.615 | 260 | 178 | 8 | 16 | 263 | 47 | 300 | 3.13e-15 | 74.3 |
| MS.gene89332.t1 | AT5G04900 | 28.125 | 192 | 129 | 5 | 22 | 205 | 83 | 273 | 8.68e-15 | 73.6 |
| MS.gene89332.t1 | AT1G49670 | 31.532 | 222 | 132 | 9 | 18 | 225 | 6 | 221 | 1.06e-14 | 73.9 |
| MS.gene89332.t1 | AT1G49670 | 31.696 | 224 | 129 | 10 | 18 | 225 | 6 | 221 | 1.29e-14 | 73.9 |
| MS.gene89332.t1 | AT3G26760 | 26.616 | 263 | 172 | 7 | 16 | 265 | 36 | 290 | 1.60e-14 | 72.4 |
| MS.gene89332.t1 | AT3G42960 | 27.574 | 272 | 167 | 9 | 11 | 266 | 5 | 262 | 2.06e-14 | 71.6 |
| MS.gene89332.t1 | AT3G51680 | 27.660 | 282 | 183 | 8 | 1 | 266 | 20 | 296 | 5.57e-14 | 70.9 |
| MS.gene89332.t1 | AT3G47350 | 28.866 | 194 | 127 | 6 | 18 | 206 | 46 | 233 | 6.78e-14 | 70.5 |
| MS.gene89332.t1 | AT3G47350 | 28.866 | 194 | 127 | 6 | 18 | 206 | 46 | 233 | 7.61e-14 | 70.5 |
| MS.gene89332.t1 | AT5G50690 | 29.167 | 192 | 125 | 6 | 16 | 202 | 45 | 230 | 1.33e-13 | 68.9 |
| MS.gene89332.t1 | AT5G50590 | 29.167 | 192 | 125 | 6 | 16 | 202 | 45 | 230 | 1.33e-13 | 68.9 |
| MS.gene89332.t1 | AT5G50690 | 30.233 | 172 | 116 | 4 | 16 | 185 | 45 | 214 | 1.84e-13 | 69.3 |
| MS.gene89332.t1 | AT5G50590 | 30.233 | 172 | 116 | 4 | 16 | 185 | 45 | 214 | 1.84e-13 | 69.3 |
| MS.gene89332.t1 | AT3G03350 | 30.058 | 173 | 108 | 4 | 36 | 203 | 188 | 352 | 8.70e-13 | 67.8 |
| MS.gene89332.t1 | AT2G47130 | 28.185 | 259 | 165 | 9 | 16 | 265 | 6 | 252 | 1.27e-12 | 66.6 |
| MS.gene89332.t1 | AT1G67730 | 28.505 | 214 | 136 | 6 | 17 | 217 | 50 | 259 | 1.81e-12 | 66.6 |
| MS.gene89332.t1 | AT4G03140 | 26.154 | 260 | 176 | 7 | 16 | 266 | 78 | 330 | 7.75e-12 | 65.1 |
| MS.gene89332.t1 | AT4G13250 | 24.229 | 227 | 148 | 5 | 22 | 228 | 165 | 387 | 8.53e-12 | 65.1 |
| MS.gene89332.t1 | AT3G59710 | 34.307 | 137 | 81 | 4 | 13 | 145 | 13 | 144 | 5.24e-11 | 62.0 |
| MS.gene89332.t1 | AT3G59710 | 34.307 | 137 | 81 | 4 | 13 | 145 | 42 | 173 | 7.45e-11 | 62.0 |
| MS.gene89332.t1 | AT5G10050 | 27.128 | 188 | 130 | 4 | 22 | 208 | 11 | 192 | 8.63e-11 | 61.2 |
Find 54 sgRNAs with CRISPR-Local
Find 137 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGAAGAGTTAGCTGAATT+TGG | 0.164853 | 7.3:-42123277 | MS.gene89332:CDS |
| CCATTCTAATGCCAAGTTCT+TGG | 0.242739 | 7.3:+42122638 | None:intergenic |
| GTGTTTACTTCTTCCGTTGC+AGG | 0.266264 | 7.3:-42122818 | MS.gene89332:CDS |
| CTTCTAAAGGAATCTGGATA+TGG | 0.270015 | 7.3:-42122848 | MS.gene89332:CDS |
| TGAACAACGCAAGAGATTAA+TGG | 0.291743 | 7.3:-42123143 | MS.gene89332:CDS |
| AGCAAGGGGTTTAATGTAAC+AGG | 0.349868 | 7.3:-42123190 | MS.gene89332:CDS |
| ACTGTTTCTTCTATCTTTCA+AGG | 0.382915 | 7.3:-42123118 | MS.gene89332:CDS |
| AGAAGATATTAATAAATGTT+TGG | 0.384019 | 7.3:-42123224 | MS.gene89332:CDS |
| TCCGAAAGTGATGTCTTAAC+AGG | 0.388653 | 7.3:+42122576 | None:intergenic |
| CACCCACTTCTAAAGGAATC+TGG | 0.397044 | 7.3:-42122854 | MS.gene89332:CDS |
| TTAATAAATGTTTGGAAGAG+TGG | 0.412448 | 7.3:-42123216 | MS.gene89332:CDS |
| ACCTGTTAAGACATCACTTT+CGG | 0.414846 | 7.3:-42122577 | MS.gene89332:CDS |
| AACAAAGTTAAGCAGCTTCA+AGG | 0.417397 | 7.3:-42123632 | MS.gene89332:CDS |
| CCAAGAACTTGGCATTAGAA+TGG | 0.430035 | 7.3:-42122638 | MS.gene89332:CDS |
| GGACAAATTATAGCTATTGA+TGG | 0.447966 | 7.3:-42121506 | MS.gene89332:CDS |
| CGTGCAAATGCTGTGGCACC+TGG | 0.452656 | 7.3:-42122600 | MS.gene89332:CDS |
| ACAGGTGGAACCCGAGGCAT+TGG | 0.454943 | 7.3:-42123571 | MS.gene89332:CDS |
| GAATCAATTCACCAAGAACT+TGG | 0.462001 | 7.3:-42122649 | MS.gene89332:CDS |
| TCTGTTTATGCAGCCACTAA+AGG | 0.462516 | 7.3:-42122773 | MS.gene89332:intron |
| GCTGCATAAACAGATAAAAC+AGG | 0.469195 | 7.3:+42122782 | None:intergenic |
| TCAAACTCCTACAGGTCGTA+TGG | 0.485964 | 7.3:-42121594 | MS.gene89332:CDS |
| GAAGATATATCAACTACATT+GGG | 0.488805 | 7.3:-42122917 | MS.gene89332:CDS |
| TGAAGATATATCAACTACAT+TGG | 0.493782 | 7.3:-42122918 | MS.gene89332:CDS |
| GTAGTGTCTCAAACTCCTAC+AGG | 0.497877 | 7.3:-42121602 | MS.gene89332:CDS |
| AGGAAATTTACCCAATGCCT+CGG | 0.498258 | 7.3:+42123560 | None:intergenic |
| ACTTGCACACCCACTTCTAA+AGG | 0.498917 | 7.3:-42122861 | MS.gene89332:CDS |
| CAAGAACTTGGCATTAGAAT+GGG | 0.500423 | 7.3:-42122637 | MS.gene89332:CDS |
| AGTGATGTCTTAACAGGTCC+AGG | 0.505141 | 7.3:+42122582 | None:intergenic |
| GGAAATTTACCCAATGCCTC+GGG | 0.506254 | 7.3:+42123561 | None:intergenic |
| TTCTAAAGGAATCTGGATAT+GGG | 0.510619 | 7.3:-42122847 | MS.gene89332:CDS |
| TTACAGGATTATGACTCTGA+AGG | 0.523876 | 7.3:-42121644 | MS.gene89332:intron |
| ATCACTTTCGGAATCAATCA+TGG | 0.531450 | 7.3:-42122565 | MS.gene89332:intron |
| CAGGTGGAACCCGAGGCATT+GGG | 0.538316 | 7.3:-42123570 | MS.gene89332:intron |
| TATCCAGATTCCTTTAGAAG+TGG | 0.549645 | 7.3:+42122851 | None:intergenic |
| ATCCAGATTCCTTTAGAAGT+GGG | 0.552090 | 7.3:+42122852 | None:intergenic |
| GAAGGGTATAAAGCTATAGC+TGG | 0.552123 | 7.3:-42121626 | MS.gene89332:CDS |
| CCAGTGATGTGTGATGCAGC+TGG | 0.556867 | 7.3:+42121527 | None:intergenic |
| TTGGAAGAGTGGAAAAGCAA+GGG | 0.557030 | 7.3:-42123205 | MS.gene89332:CDS |
| TGTAGTTGATATATCTTCAT+CGG | 0.557165 | 7.3:+42122922 | None:intergenic |
| CCAGCTGCATCACACATCAC+TGG | 0.560488 | 7.3:-42121527 | MS.gene89332:CDS |
| GCAGCTTCAAGGATAAAAGA+TGG | 0.570695 | 7.3:-42123621 | MS.gene89332:CDS |
| TACAGGATTATGACTCTGAA+GGG | 0.581397 | 7.3:-42121643 | MS.gene89332:intron |
| GATAAAAGATGGTCACTACA+TGG | 0.585575 | 7.3:-42123610 | MS.gene89332:CDS |
| TTTGGAAGAGTGGAAAAGCA+AGG | 0.587401 | 7.3:-42123206 | MS.gene89332:CDS |
| TGGAAGAGTGGAAAAGCAAG+GGG | 0.590781 | 7.3:-42123204 | MS.gene89332:CDS |
| CAAACTCCTACAGGTCGTAT+GGG | 0.597780 | 7.3:-42121593 | MS.gene89332:CDS |
| GGTATGACTGCGTTAGTGAC+AGG | 0.615872 | 7.3:-42123589 | MS.gene89332:CDS |
| CAAATTATAGCTATTGATGG+AGG | 0.616648 | 7.3:-42121503 | MS.gene89332:CDS |
| CTTGGCATTAGAATGGGCAA+AGG | 0.624391 | 7.3:-42122631 | MS.gene89332:CDS |
| GGTGTGCAAGTTGACACAAA+TGG | 0.648867 | 7.3:+42122873 | None:intergenic |
| TAATATTCGTGCAAATGCTG+TGG | 0.649939 | 7.3:-42122607 | MS.gene89332:CDS |
| GTCTCTCCCATACGACCTGT+AGG | 0.653589 | 7.3:+42121587 | None:intergenic |
| TTAGTGACAGGTGGAACCCG+AGG | 0.654837 | 7.3:-42123577 | MS.gene89332:CDS |
| ATGACTGCGTTAGTGACAGG+TGG | 0.701550 | 7.3:-42123586 | MS.gene89332:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATACAAAATCAATTTAAA+AGG | + | chr7.3:42121646-42121665 | None:intergenic | 10.0% |
| !!! | TATAAAGTTTTTTTTTTGAA+AGG | + | chr7.3:42121755-42121774 | None:intergenic | 10.0% |
| !! | AAAGAATTACAATTCATTAT+AGG | - | chr7.3:42123413-42123432 | MS.gene89332:intron | 15.0% |
| !! | AGAAGATATTAATAAATGTT+TGG | - | chr7.3:42121906-42121925 | MS.gene89332:intron | 15.0% |
| !!! | AAAATTATATACATGTTTTG+AGG | + | chr7.3:42122098-42122117 | None:intergenic | 15.0% |
| !!! | ATATAATGTTACCTTATTTT+AGG | - | chr7.3:42122140-42122159 | MS.gene89332:intron | 15.0% |
| !!! | ATATTTTTCGATTTTAAACT+AGG | - | chr7.3:42121821-42121840 | MS.gene89332:intron | 15.0% |
| !!! | ATCAAATTATTGTTTTACAT+AGG | + | chr7.3:42122450-42122469 | None:intergenic | 15.0% |
| !!! | ATTTTTTATTTAGCATAGAA+AGG | - | chr7.3:42123242-42123261 | MS.gene89332:CDS | 15.0% |
| !!! | ATTTTTTTTTTTACAGAGTA+AGG | - | chr7.3:42123273-42123292 | MS.gene89332:CDS | 15.0% |
| !!! | TCAAATTCATTTTATTAAAG+AGG | + | chr7.3:42122395-42122414 | None:intergenic | 15.0% |
| !! | CTAATTTAATATGTTTGACA+TGG | - | chr7.3:42121691-42121710 | MS.gene89332:intron | 20.0% |
| !! | GTAAAACAATAATTTGATTC+AGG | - | chr7.3:42122452-42122471 | MS.gene89332:intron | 20.0% |
| !! | GTAGAAATTTCAAGATATTT+AGG | + | chr7.3:42123353-42123372 | None:intergenic | 20.0% |
| !! | TCTTAAAGGCAAAATTAAAA+AGG | - | chr7.3:42121602-42121621 | MS.gene89332:CDS | 20.0% |
| !! | TGGTTATGAATTAATCTTTA+GGG | - | chr7.3:42123060-42123079 | MS.gene89332:intron | 20.0% |
| !! | TTGGTTATGAATTAATCTTT+AGG | - | chr7.3:42123059-42123078 | MS.gene89332:intron | 20.0% |
| !!! | AATTCATTTTATTAAAGAGG+AGG | + | chr7.3:42122392-42122411 | None:intergenic | 20.0% |
| !!! | CATATTTTTTTTTTTGGTAG+TGG | + | chr7.3:42122960-42122979 | None:intergenic | 20.0% |
| !!! | CTCACACATATTTTTTTTTT+TGG | + | chr7.3:42122966-42122985 | None:intergenic | 20.0% |
| ! | AATTTAGTGACTTCTAAATC+TGG | + | chr7.3:42123225-42123244 | None:intergenic | 25.0% |
| ! | AGCATTGTTTACCTAAAATA+AGG | + | chr7.3:42122154-42122173 | None:intergenic | 25.0% |
| ! | GAAGATATATCAACTACATT+GGG | - | chr7.3:42122213-42122232 | MS.gene89332:intron | 25.0% |
| ! | TGAAGATATATCAACTACAT+TGG | - | chr7.3:42122212-42122231 | MS.gene89332:intron | 25.0% |
| ! | TGCATATTATATACAGAGTT+CGG | - | chr7.3:42122879-42122898 | MS.gene89332:CDS | 25.0% |
| ! | TTAATAAATGTTTGGAAGAG+TGG | - | chr7.3:42121914-42121933 | MS.gene89332:intron | 25.0% |
| ! | TTCCTTATCTTAACTCTTAA+AGG | - | chr7.3:42121588-42121607 | MS.gene89332:CDS | 25.0% |
| !! | ATGTTTGACATGGTAATTTT+TGG | - | chr7.3:42121701-42121720 | MS.gene89332:intron | 25.0% |
| !! | CATATTTTATGCATTGTCTA+GGG | + | chr7.3:42122913-42122932 | None:intergenic | 25.0% |
| !! | GTTATCTACTATTTTCTTCA+TGG | + | chr7.3:42122187-42122206 | None:intergenic | 25.0% |
| !! | TGTAGTTGATATATCTTCAT+CGG | + | chr7.3:42122211-42122230 | None:intergenic | 25.0% |
| !!! | ACTATTACTACTTTTAGTAG+TGG | + | chr7.3:42123179-42123198 | None:intergenic | 25.0% |
| AAAAGTTCTCGACTAAATAG+TGG | - | chr7.3:42123011-42123030 | MS.gene89332:intron | 30.0% | |
| AAGTAGTAATAGTTCACGTT+TGG | - | chr7.3:42123186-42123205 | MS.gene89332:CDS | 30.0% | |
| ACAATAATTTGATTCAGGAG+CGG | - | chr7.3:42122457-42122476 | MS.gene89332:intron | 30.0% | |
| CAAATTATAGCTATTGATGG+AGG | - | chr7.3:42123627-42123646 | MS.gene89332:CDS | 30.0% | |
| CATATTATATACAGAGTTCG+GGG | - | chr7.3:42122881-42122900 | MS.gene89332:CDS | 30.0% | |
| CGAGAACTTTAATAACATGT+TGG | + | chr7.3:42122821-42122840 | None:intergenic | 30.0% | |
| GACAATGCATAAAATATGCA+AGG | - | chr7.3:42122915-42122934 | MS.gene89332:CDS | 30.0% | |
| GAGTAAGGATAATTATTGAG+AGG | - | chr7.3:42123288-42123307 | MS.gene89332:CDS | 30.0% | |
| GCATATTATATACAGAGTTC+GGG | - | chr7.3:42122880-42122899 | MS.gene89332:CDS | 30.0% | |
| GGACAAATTATAGCTATTGA+TGG | - | chr7.3:42123624-42123643 | MS.gene89332:CDS | 30.0% | |
| TGCATTTGTTCATGTAAGAT+AGG | - | chr7.3:42122590-42122609 | MS.gene89332:CDS | 30.0% | |
| TTAGGGTGCATCAAATATTA+CGG | - | chr7.3:42123077-42123096 | MS.gene89332:intron | 30.0% | |
| ! | AATAGCTTTTAAACCTGCAA+CGG | + | chr7.3:42122328-42122347 | None:intergenic | 30.0% |
| ! | ACTGTTTCTTCTATCTTTCA+AGG | - | chr7.3:42122012-42122031 | MS.gene89332:intron | 30.0% |
| ! | ATGTTTATACTGCTTGTTAC+AGG | - | chr7.3:42123470-42123489 | MS.gene89332:intron | 30.0% |
| ! | GCATATTTTATGCATTGTCT+AGG | + | chr7.3:42122914-42122933 | None:intergenic | 30.0% |
| ! | TATTTTCTTCATGGTAGGTT+TGG | + | chr7.3:42122178-42122197 | None:intergenic | 30.0% |
| ! | TCTACTATTTTCTTCATGGT+AGG | + | chr7.3:42122183-42122202 | None:intergenic | 30.0% |
| ! | TGCCTTTAAGAGTTAAGATA+AGG | + | chr7.3:42121593-42121612 | None:intergenic | 30.0% |
| ! | TTCTAAAGGAATCTGGATAT+GGG | - | chr7.3:42122283-42122302 | MS.gene89332:intron | 30.0% |
| !!! | TTTTTTTTTGTCAAGTAGCG+TGG | + | chr7.3:42122995-42123014 | None:intergenic | 30.0% |
| !!! | TTTTTTTTTTGGTAGTGGCT+GGG | + | chr7.3:42122955-42122974 | None:intergenic | 30.0% |
| !!! | TTTTTTTTTTTGGTAGTGGC+TGG | + | chr7.3:42122956-42122975 | None:intergenic | 30.0% |
| AACAAAGTTAAGCAGCTTCA+AGG | - | chr7.3:42121498-42121517 | MS.gene89332:CDS | 35.0% | |
| AACTATCACTACTCATAGTC+GGG | + | chr7.3:42122798-42122817 | None:intergenic | 35.0% | |
| ACCTGTTAAGACATCACTTT+CGG | - | chr7.3:42122553-42122572 | MS.gene89332:intron | 35.0% | |
| ATCACTTTCGGAATCAATCA+TGG | - | chr7.3:42122565-42122584 | MS.gene89332:intron | 35.0% | |
| CAAGAACTTGGCATTAGAAT+GGG | - | chr7.3:42122493-42122512 | MS.gene89332:intron | 35.0% | |
| CATAAAATATGCAAGGTCTG+GGG | - | chr7.3:42122922-42122941 | MS.gene89332:CDS | 35.0% | |
| CATGTAAGATAGGACTATGA+GGG | - | chr7.3:42122600-42122619 | MS.gene89332:CDS | 35.0% | |
| GAACTATCACTACTCATAGT+CGG | + | chr7.3:42122799-42122818 | None:intergenic | 35.0% | |
| GAATCAATTCACCAAGAACT+TGG | - | chr7.3:42122481-42122500 | MS.gene89332:intron | 35.0% | |
| GACTATGAGGGATAATACTT+TGG | - | chr7.3:42122612-42122631 | MS.gene89332:CDS | 35.0% | |
| GAGGAAAAACATACCTTTAG+TGG | + | chr7.3:42122373-42122392 | None:intergenic | 35.0% | |
| GATAAAAGATGGTCACTACA+TGG | - | chr7.3:42121520-42121539 | MS.gene89332:CDS | 35.0% | |
| GCATAAAATATGCAAGGTCT+GGG | - | chr7.3:42122921-42122940 | MS.gene89332:CDS | 35.0% | |
| GCTGCATAAACAGATAAAAC+AGG | + | chr7.3:42122351-42122370 | None:intergenic | 35.0% | |
| GTATGGGTGACATTAAATCT+GGG | - | chr7.3:42122704-42122723 | MS.gene89332:intron | 35.0% | |
| GTTGAAGAGTTAGCTGAATT+TGG | - | chr7.3:42121853-42121872 | MS.gene89332:intron | 35.0% | |
| TAATATTCGTGCAAATGCTG+TGG | - | chr7.3:42122523-42122542 | MS.gene89332:intron | 35.0% | |
| TACAGGATTATGACTCTGAA+GGG | - | chr7.3:42123487-42123506 | MS.gene89332:intron | 35.0% | |
| TCATGTAAGATAGGACTATG+AGG | - | chr7.3:42122599-42122618 | MS.gene89332:CDS | 35.0% | |
| TGAACAACGCAAGAGATTAA+TGG | - | chr7.3:42121987-42122006 | MS.gene89332:intron | 35.0% | |
| TGCATAAAATATGCAAGGTC+TGG | - | chr7.3:42122920-42122939 | MS.gene89332:CDS | 35.0% | |
| TGTATGGGTGACATTAAATC+TGG | - | chr7.3:42122703-42122722 | MS.gene89332:intron | 35.0% | |
| TTACAGGATTATGACTCTGA+AGG | - | chr7.3:42123486-42123505 | MS.gene89332:intron | 35.0% | |
| ! | ATCCAGATTCCTTTAGAAGT+GGG | + | chr7.3:42122281-42122300 | None:intergenic | 35.0% |
| ! | CTTCTAAAGGAATCTGGATA+TGG | - | chr7.3:42122282-42122301 | MS.gene89332:intron | 35.0% |
| ! | TATCCAGATTCCTTTAGAAG+TGG | + | chr7.3:42122282-42122301 | None:intergenic | 35.0% |
| ! | TCTTCTCAGAGTATCACATT+TGG | - | chr7.3:42123040-42123059 | MS.gene89332:intron | 35.0% |
| ! | TTGGGAACAAATTTTGTGTC+TGG | - | chr7.3:42122231-42122250 | MS.gene89332:intron | 35.0% |
| !!! | TACATGTTTTGAGGACTTAG+AGG | + | chr7.3:42122089-42122108 | None:intergenic | 35.0% |
| !!! | TTTTTTTTTGGTAGTGGCTG+GGG | + | chr7.3:42122954-42122973 | None:intergenic | 35.0% |
| ACACAAAGGGTTGTATTGTG+TGG | - | chr7.3:42122669-42122688 | MS.gene89332:intron | 40.0% | |
| ACACAATACAACCCTTTGTG+TGG | + | chr7.3:42122670-42122689 | None:intergenic | 40.0% | |
| AGCAAGGGGTTTAATGTAAC+AGG | - | chr7.3:42121940-42121959 | MS.gene89332:intron | 40.0% | |
| AGGAAATTTACCCAATGCCT+CGG | + | chr7.3:42121573-42121592 | None:intergenic | 40.0% | |
| ATTAAATCTGGGCCACACAA+AGG | - | chr7.3:42122655-42122674 | MS.gene89332:CDS | 40.0% | |
| CCAAGAACTTGGCATTAGAA+TGG | - | chr7.3:42122492-42122511 | MS.gene89332:intron | 40.0% | |
| CCATTCTAATGCCAAGTTCT+TGG | + | chr7.3:42122495-42122514 | None:intergenic | 40.0% | |
| GCAGCTTCAAGGATAAAAGA+TGG | - | chr7.3:42121509-42121528 | MS.gene89332:CDS | 40.0% | |
| GTCACCGTGACATTAAATCT+GGG | - | chr7.3:42122644-42122663 | MS.gene89332:CDS | 40.0% | |
| GTGGCTCAGATTTAATGTCA+CGG | - | chr7.3:42122748-42122767 | MS.gene89332:intron | 40.0% | |
| TACCAACTGAGCTAAGTTCA+CGG | + | chr7.3:42122852-42122871 | None:intergenic | 40.0% | |
| TCCGAAAGTGATGTCTTAAC+AGG | + | chr7.3:42122557-42122576 | None:intergenic | 40.0% | |
| TCTGTTTATGCAGCCACTAA+AGG | - | chr7.3:42122357-42122376 | MS.gene89332:intron | 40.0% | |
| TGTCACCGTGACATTAAATC+TGG | - | chr7.3:42122643-42122662 | MS.gene89332:CDS | 40.0% | |
| TTAAATCTGGGCCACACAAA+GGG | - | chr7.3:42122656-42122675 | MS.gene89332:CDS | 40.0% | |
| TTGGAAGAGTGGAAAAGCAA+GGG | - | chr7.3:42121925-42121944 | MS.gene89332:intron | 40.0% | |
| TTTGGAAGAGTGGAAAAGCA+AGG | - | chr7.3:42121924-42121943 | MS.gene89332:intron | 40.0% | |
| ! | GAAGGGTATAAAGCTATAGC+TGG | - | chr7.3:42123504-42123523 | MS.gene89332:intron | 40.0% |
| ! | TGAACTTAGCTCAGTTGGTA+GGG | - | chr7.3:42122852-42122871 | MS.gene89332:CDS | 40.0% |
| ACACAACACACACCTTTGTG+TGG | + | chr7.3:42122730-42122749 | None:intergenic | 45.0% | |
| ACTTGCACACCCACTTCTAA+AGG | - | chr7.3:42122269-42122288 | MS.gene89332:intron | 45.0% | |
| AGTGATGTCTTAACAGGTCC+AGG | + | chr7.3:42122551-42122570 | None:intergenic | 45.0% | |
| CAAACTCCTACAGGTCGTAT+GGG | - | chr7.3:42123537-42123556 | MS.gene89332:intron | 45.0% | |
| CTTGGCATTAGAATGGGCAA+AGG | - | chr7.3:42122499-42122518 | MS.gene89332:intron | 45.0% | |
| GGAAATTTACCCAATGCCTC+GGG | + | chr7.3:42121572-42121591 | None:intergenic | 45.0% | |
| GTAGTGTCTCAAACTCCTAC+AGG | - | chr7.3:42123528-42123547 | MS.gene89332:intron | 45.0% | |
| GTCACCCATACAACACATCT+GGG | + | chr7.3:42122695-42122714 | None:intergenic | 45.0% | |
| GTGAACTTAGCTCAGTTGGT+AGG | - | chr7.3:42122851-42122870 | MS.gene89332:CDS | 45.0% | |
| GTGGCCCAGATTTAATGTCA+CGG | + | chr7.3:42122651-42122670 | None:intergenic | 45.0% | |
| GTGTTTACTTCTTCCGTTGC+AGG | - | chr7.3:42122312-42122331 | MS.gene89332:intron | 45.0% | |
| TATCACTACTCATAGTCGGG+TGG | + | chr7.3:42122795-42122814 | None:intergenic | 45.0% | |
| TCAAACTCCTACAGGTCGTA+TGG | - | chr7.3:42123536-42123555 | MS.gene89332:intron | 45.0% | |
| TGAGCTAAGTTCACGGAGAT+TGG | + | chr7.3:42122845-42122864 | None:intergenic | 45.0% | |
| TGGAAGAGTGGAAAAGCAAG+GGG | - | chr7.3:42121926-42121945 | MS.gene89332:intron | 45.0% | |
| TGTCACCCATACAACACATC+TGG | + | chr7.3:42122696-42122715 | None:intergenic | 45.0% | |
| ! | ACACAAAGGTGTGTGTTGTG+TGG | - | chr7.3:42122729-42122748 | MS.gene89332:intron | 45.0% |
| ! | CACCCACTTCTAAAGGAATC+TGG | - | chr7.3:42122276-42122295 | MS.gene89332:intron | 45.0% |
| ! | GGTGTGCAAGTTGACACAAA+TGG | + | chr7.3:42122260-42122279 | None:intergenic | 45.0% |
| !! | CAAATAAATAAAAATATAAA+TGG | + | chr7.3:42122061-42122080 | None:intergenic | 5.0% |
| ATGACTGCGTTAGTGACAGG+TGG | - | chr7.3:42121544-42121563 | MS.gene89332:CDS | 50.0% | |
| CTCCGTGAACTTAGCTCAGT+TGG | - | chr7.3:42122847-42122866 | MS.gene89332:CDS | 50.0% | |
| GGTATGACTGCGTTAGTGAC+AGG | - | chr7.3:42121541-42121560 | MS.gene89332:CDS | 50.0% | |
| GTGGCCCAGATGTGTTGTAT+GGG | - | chr7.3:42122688-42122707 | MS.gene89332:intron | 50.0% | |
| TGTGGCCCAGATGTGTTGTA+TGG | - | chr7.3:42122687-42122706 | MS.gene89332:intron | 50.0% | |
| CCAGCTGCATCACACATCAC+TGG | - | chr7.3:42123603-42123622 | MS.gene89332:CDS | 55.0% | |
| CCAGTGATGTGTGATGCAGC+TGG | + | chr7.3:42123606-42123625 | None:intergenic | 55.0% | |
| CTCATAGTCGGGTGGCACTT+TGG | + | chr7.3:42122787-42122806 | None:intergenic | 55.0% | |
| GTCTCTCCCATACGACCTGT+AGG | + | chr7.3:42123546-42123565 | None:intergenic | 55.0% | |
| TTAGTGACAGGTGGAACCCG+AGG | - | chr7.3:42121553-42121572 | MS.gene89332:CDS | 55.0% | |
| ACAGGTGGAACCCGAGGCAT+TGG | - | chr7.3:42121559-42121578 | MS.gene89332:CDS | 60.0% | |
| CGTGCAAATGCTGTGGCACC+TGG | - | chr7.3:42122530-42122549 | MS.gene89332:intron | 60.0% | |
| ! | CAGGTGGAACCCGAGGCATT+GGG | - | chr7.3:42121560-42121579 | MS.gene89332:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 42121490 | 42123662 | 42121490 | ID=MS.gene89332 |
| chr7.3 | mRNA | 42121490 | 42123662 | 42121490 | ID=MS.gene89332.t1;Parent=MS.gene89332 |
| chr7.3 | exon | 42123571 | 42123662 | 42123571 | ID=MS.gene89332.t1.exon1;Parent=MS.gene89332.t1 |
| chr7.3 | CDS | 42123571 | 42123662 | 42123571 | ID=cds.MS.gene89332.t1;Parent=MS.gene89332.t1 |
| chr7.3 | exon | 42123102 | 42123309 | 42123102 | ID=MS.gene89332.t1.exon2;Parent=MS.gene89332.t1 |
| chr7.3 | CDS | 42123102 | 42123309 | 42123102 | ID=cds.MS.gene89332.t1;Parent=MS.gene89332.t1 |
| chr7.3 | exon | 42122774 | 42122990 | 42122774 | ID=MS.gene89332.t1.exon3;Parent=MS.gene89332.t1 |
| chr7.3 | CDS | 42122774 | 42122990 | 42122774 | ID=cds.MS.gene89332.t1;Parent=MS.gene89332.t1 |
| chr7.3 | exon | 42122566 | 42122678 | 42122566 | ID=MS.gene89332.t1.exon4;Parent=MS.gene89332.t1 |
| chr7.3 | CDS | 42122566 | 42122678 | 42122566 | ID=cds.MS.gene89332.t1;Parent=MS.gene89332.t1 |
| chr7.3 | exon | 42121490 | 42121660 | 42121490 | ID=MS.gene89332.t1.exon5;Parent=MS.gene89332.t1 |
| chr7.3 | CDS | 42121490 | 42121660 | 42121490 | ID=cds.MS.gene89332.t1;Parent=MS.gene89332.t1 |
| Gene Sequence |
| Protein sequence |
