Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1404940 | XP_024641226.2 | 90.667 | 150 | 14 | 0 | 31 | 180 | 221 | 370 | 8.25e-94 | 291 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1404940 | G7KP14 | 90.698 | 86 | 8 | 0 | 31 | 116 | 60 | 145 | 2.20e-48 | 167 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa1404940 | 0.805883 | 1.076358e-49 | -8.615850e-47 |
| Msa0006110 | Msa1404940 | 0.804114 | 2.523005e-49 | -8.615850e-47 |
| Msa0020410 | Msa1404940 | 0.802241 | 6.158340e-49 | -8.615850e-47 |
| Msa0029630 | Msa1404940 | 0.800886 | 1.167941e-48 | -8.615850e-47 |
| Msa0030300 | Msa1404940 | 0.812078 | 5.080409e-51 | -8.615850e-47 |
| Msa0032470 | Msa1404940 | 0.813145 | 2.968421e-51 | -8.615850e-47 |
| Msa0032590 | Msa1404940 | 0.822291 | 2.562222e-53 | -8.615850e-47 |
| Msa0043980 | Msa1404940 | 0.829481 | 5.026241e-55 | -8.615850e-47 |
| Msa0051020 | Msa1404940 | 0.816654 | 4.946226e-52 | -8.615850e-47 |
| Msa0051630 | Msa1404940 | 0.816089 | 6.619540e-52 | -8.615850e-47 |
| Msa0051740 | Msa1404940 | 0.824150 | 9.435148e-54 | -8.615850e-47 |
| Msa0051750 | Msa1404940 | 0.834864 | 2.341848e-56 | -8.615850e-47 |
| Msa0071250 | Msa1404940 | 0.801299 | 9.613673e-49 | -8.615850e-47 |
| Msa0072420 | Msa1404940 | 0.807802 | 4.230355e-50 | -8.615850e-47 |
| Msa0079130 | Msa1404940 | 0.803306 | 3.712993e-49 | -8.615850e-47 |
| Msa0083280 | Msa1404940 | 0.804925 | 1.709140e-49 | -8.615850e-47 |
| Msa0090360 | Msa1404940 | 0.823974 | 1.037589e-53 | -8.615850e-47 |
| Msa0090520 | Msa1404940 | 0.802941 | 4.418365e-49 | -8.615850e-47 |
| Msa0090550 | Msa1404940 | 0.828546 | 8.465227e-55 | -8.615850e-47 |
| Msa0091610 | Msa1404940 | 0.803140 | 4.017464e-49 | -8.615850e-47 |
| Msa0101270 | Msa1404940 | 0.828278 | 9.823276e-55 | -8.615850e-47 |
| Msa0104230 | Msa1404940 | 0.824824 | 6.546236e-54 | -8.615850e-47 |
| Msa0104240 | Msa1404940 | 0.800350 | 1.501628e-48 | -8.615850e-47 |
| Msa0104800 | Msa1404940 | 0.820140 | 8.029271e-53 | -8.615850e-47 |
| Msa0106710 | Msa1404940 | 0.815451 | 9.183798e-52 | -8.615850e-47 |
| Msa0106850 | Msa1404940 | 0.819815 | 9.527900e-53 | -8.615850e-47 |
| Msa1351550 | Msa1404940 | 0.807034 | 6.154753e-50 | -8.615850e-47 |
| Msa1353470 | Msa1404940 | 0.851524 | 8.389546e-61 | -8.615850e-47 |
| Msa1353980 | Msa1404940 | 0.808710 | 2.709004e-50 | -8.615850e-47 |
| Msa1357190 | Msa1404940 | 0.826398 | 2.772928e-54 | -8.615850e-47 |
| Msa1357890 | Msa1404940 | 0.844860 | 5.820076e-59 | -8.615850e-47 |
| Msa1360440 | Msa1404940 | 0.811828 | 5.757762e-51 | -8.615850e-47 |
| Msa1360980 | Msa1404940 | 0.809202 | 2.125596e-50 | -8.615850e-47 |
| Msa1368430 | Msa1404940 | 0.812814 | 3.508041e-51 | -8.615850e-47 |
| Msa1370590 | Msa1404940 | 0.813596 | 2.362264e-51 | -8.615850e-47 |
| Msa1375840 | Msa1404940 | 0.820539 | 6.502127e-53 | -8.615850e-47 |
| Msa1377820 | Msa1404940 | 0.806479 | 8.063507e-50 | -8.615850e-47 |
| Msa1383230 | Msa1404940 | 0.810746 | 9.887247e-51 | -8.615850e-47 |
| Msa1384100 | Msa1404940 | 0.815272 | 1.006270e-51 | -8.615850e-47 |
| Msa1391750 | Msa1404940 | 0.801813 | 7.542020e-49 | -8.615850e-47 |
| Msa1397120 | Msa1404940 | 0.816792 | 4.606844e-52 | -8.615850e-47 |
| Msa1398090 | Msa1404940 | 0.847651 | 1.010646e-59 | -8.615850e-47 |
| Msa1401990 | Msa1404940 | 0.808406 | 3.146446e-50 | -8.615850e-47 |
| Msa1403890 | Msa1404940 | 0.815941 | 7.142719e-52 | -8.615850e-47 |
| Msa1404940 | Msa1407190 | 0.820919 | 5.318857e-53 | -8.615850e-47 |
| Msa1404940 | Msa1410510 | 0.814731 | 1.327184e-51 | -8.615850e-47 |
| Msa1404940 | Msa1419870 | 0.803825 | 2.897350e-49 | -8.615850e-47 |
| Msa1404940 | Msa1428780 | 0.825691 | 4.083921e-54 | -8.615850e-47 |
| Msa1404940 | Msa1432130 | 0.815728 | 7.968112e-52 | -8.615850e-47 |
| Msa1404940 | Msa1433390 | 0.822707 | 2.050820e-53 | -8.615850e-47 |
| Msa1404940 | Msa1444120 | 0.808128 | 3.606823e-50 | -8.615850e-47 |
| Msa1404940 | Msa1454620 | 0.808742 | 2.667337e-50 | -8.615850e-47 |
| Msa1404940 | Msa1463900 | 0.804966 | 1.675994e-49 | -8.615850e-47 |
| Msa0622790 | Msa1404940 | 0.807878 | 4.075610e-50 | -8.615850e-47 |
| Msa0639310 | Msa1404940 | 0.815887 | 7.344210e-52 | -8.615850e-47 |
| Msa0642970 | Msa1404940 | 0.804801 | 1.814805e-49 | -8.615850e-47 |
| Msa0679360 | Msa1404940 | 0.800039 | 1.737358e-48 | -8.615850e-47 |
| Msa0682680 | Msa1404940 | 0.812117 | 4.980966e-51 | -8.615850e-47 |
| Msa0705190 | Msa1404940 | 0.802200 | 6.281358e-49 | -8.615850e-47 |
| Msa0709160 | Msa1404940 | 0.827326 | 1.664252e-54 | -8.615850e-47 |
| Msa0719180 | Msa1404940 | 0.802585 | 5.230820e-49 | -8.615850e-47 |
| Msa0721280 | Msa1404940 | 0.849422 | 3.266723e-60 | -8.615850e-47 |
| Msa0726080 | Msa1404940 | 0.808108 | 3.641809e-50 | -8.615850e-47 |
| Msa0740510 | Msa1404940 | 0.808641 | 2.803421e-50 | -8.615850e-47 |
| Msa0741440 | Msa1404940 | 0.804058 | 2.592133e-49 | -8.615850e-47 |
| Msa0752700 | Msa1404940 | 0.801334 | 9.454412e-49 | -8.615850e-47 |
| Msa0773590 | Msa1404940 | 0.810574 | 1.077253e-50 | -8.615850e-47 |
| Msa0784480 | Msa1404940 | 0.806571 | 7.711381e-50 | -8.615850e-47 |
| Msa0789020 | Msa1404940 | 0.820361 | 7.141955e-53 | -8.615850e-47 |
| Msa0794730 | Msa1404940 | 0.800299 | 1.538274e-48 | -8.615850e-47 |
| Msa0797930 | Msa1404940 | 0.805339 | 1.400423e-49 | -8.615850e-47 |
| Msa0800370 | Msa1404940 | 0.819208 | 1.310120e-52 | -8.615850e-47 |
| Msa0801730 | Msa1404940 | 0.801210 | 1.002540e-48 | -8.615850e-47 |
| Msa0816560 | Msa1404940 | 0.807408 | 5.128417e-50 | -8.615850e-47 |
| Msa0818060 | Msa1404940 | 0.803212 | 3.882197e-49 | -8.615850e-47 |
| Msa0820770 | Msa1404940 | 0.802180 | 6.341289e-49 | -8.615850e-47 |
| Msa0832150 | Msa1404940 | 0.803370 | 3.601419e-49 | -8.615850e-47 |
| Msa0832340 | Msa1404940 | 0.816794 | 4.601843e-52 | -8.615850e-47 |
| Msa0125450 | Msa1404940 | 0.805882 | 1.077042e-49 | -8.615850e-47 |
| Msa0125540 | Msa1404940 | 0.802590 | 5.218422e-49 | -8.615850e-47 |
| Msa0137840 | Msa1404940 | 0.809385 | 1.942500e-50 | -8.615850e-47 |
| Msa0137990 | Msa1404940 | 0.805140 | 1.541067e-49 | -8.615850e-47 |
| Msa0143540 | Msa1404940 | 0.803155 | 3.989929e-49 | -8.615850e-47 |
| Msa0145580 | Msa1404940 | 0.820699 | 5.974318e-53 | -8.615850e-47 |
| Msa0150230 | Msa1404940 | 0.800295 | 1.541116e-48 | -8.615850e-47 |
| Msa0151180 | Msa1404940 | 0.816588 | 5.117596e-52 | -8.615850e-47 |
| Msa0170570 | Msa1404940 | 0.806880 | 6.633645e-50 | -8.615850e-47 |
| Msa0173070 | Msa1404940 | 0.817510 | 3.176613e-52 | -8.615850e-47 |
| Msa0184040 | Msa1404940 | 0.819641 | 1.043683e-52 | -8.615850e-47 |
| Msa0186950 | Msa1404940 | 0.818483 | 1.915084e-52 | -8.615850e-47 |
| Msa0204960 | Msa1404940 | 0.835539 | 1.582386e-56 | -8.615850e-47 |
| Msa0207030 | Msa1404940 | 0.822403 | 2.413879e-53 | -8.615850e-47 |
| Msa0209350 | Msa1404940 | 0.808347 | 3.239043e-50 | -8.615850e-47 |
| Msa0209500 | Msa1404940 | 0.826190 | 3.107182e-54 | -8.615850e-47 |
| Msa0211150 | Msa1404940 | 0.801886 | 7.288419e-49 | -8.615850e-47 |
| Msa0231980 | Msa1404940 | 0.811882 | 5.604318e-51 | -8.615850e-47 |
| Msa0232050 | Msa1404940 | 0.800197 | 1.613666e-48 | -8.615850e-47 |
| Msa1233850 | Msa1404940 | 0.803344 | 3.646210e-49 | -8.615850e-47 |
| Msa1242580 | Msa1404940 | -0.801281 | 9.697293e-49 | -8.615850e-47 |
| Msa1250110 | Msa1404940 | 0.805526 | 1.279179e-49 | -8.615850e-47 |
| Msa1254730 | Msa1404940 | 0.802744 | 4.850712e-49 | -8.615850e-47 |
| Msa1256470 | Msa1404940 | 0.804748 | 1.861203e-49 | -8.615850e-47 |
| Msa1270660 | Msa1404940 | 0.819759 | 9.810243e-53 | -8.615850e-47 |
| Msa1294820 | Msa1404940 | 0.814688 | 1.356294e-51 | -8.615850e-47 |
| Msa1299950 | Msa1404940 | 0.800859 | 1.182446e-48 | -8.615850e-47 |
| Msa1307180 | Msa1404940 | 0.819237 | 1.290436e-52 | -8.615850e-47 |
| Msa1315750 | Msa1404940 | 0.848383 | 6.345985e-60 | -8.615850e-47 |
| Msa1316360 | Msa1404940 | 0.814430 | 1.547059e-51 | -8.615850e-47 |
| Msa1331320 | Msa1404940 | 0.822440 | 2.366897e-53 | -8.615850e-47 |
| Msa1336560 | Msa1404940 | 0.818586 | 1.814175e-52 | -8.615850e-47 |
| Msa1337170 | Msa1404940 | 0.810952 | 8.926021e-51 | -8.615850e-47 |
| Msa1341060 | Msa1404940 | 0.806505 | 7.960863e-50 | -8.615850e-47 |
| Msa0376910 | Msa1404940 | 0.815930 | 7.183851e-52 | -8.615850e-47 |
| Msa0380300 | Msa1404940 | 0.821701 | 3.511073e-53 | -8.615850e-47 |
| Msa0403770 | Msa1404940 | 0.802856 | 4.600696e-49 | -8.615850e-47 |
| Msa0482040 | Msa1404940 | 0.814879 | 1.230607e-51 | -8.615850e-47 |
| Msa0980540 | Msa1404940 | 0.809443 | 1.887857e-50 | -8.615850e-47 |
| Msa0980880 | Msa1404940 | 0.853954 | 1.697839e-61 | -8.615850e-47 |
| Msa0999100 | Msa1404940 | 0.819923 | 8.999874e-53 | -8.615850e-47 |
| Msa1001390 | Msa1404940 | 0.826225 | 3.049608e-54 | -8.615850e-47 |
| Msa1002850 | Msa1404940 | 0.823442 | 1.382461e-53 | -8.615850e-47 |
| Msa1013110 | Msa1404940 | 0.962067 | 1.942973e-120 | -8.615850e-47 |
| Msa1024750 | Msa1404940 | 0.802609 | 5.173142e-49 | -8.615850e-47 |
| Msa1031770 | Msa1404940 | 0.806316 | 8.725832e-50 | -8.615850e-47 |
| Msa1036300 | Msa1404940 | 0.811935 | 5.458509e-51 | -8.615850e-47 |
| Msa1037520 | Msa1404940 | 0.806822 | 6.826118e-50 | -8.615850e-47 |
| Msa1042660 | Msa1404940 | 0.812006 | 5.267841e-51 | -8.615850e-47 |
| Msa1058750 | Msa1404940 | 0.800082 | 1.702494e-48 | -8.615850e-47 |
| Msa1063420 | Msa1404940 | 0.822825 | 1.925698e-53 | -8.615850e-47 |
| Msa1081930 | Msa1404940 | 0.829201 | 5.876452e-55 | -8.615850e-47 |
| Msa1094190 | Msa1404940 | 0.833031 | 6.733898e-56 | -8.615850e-47 |
| Msa0241140 | Msa1404940 | 0.809708 | 1.655862e-50 | -8.615850e-47 |
| Msa0249580 | Msa1404940 | 0.819417 | 1.174111e-52 | -8.615850e-47 |
| Msa0254790 | Msa1404940 | 0.806963 | 6.370965e-50 | -8.615850e-47 |
| Msa0257490 | Msa1404940 | 0.813549 | 2.419481e-51 | -8.615850e-47 |
| Msa0259430 | Msa1404940 | 0.801011 | 1.100937e-48 | -8.615850e-47 |
| Msa0259500 | Msa1404940 | 0.801987 | 6.945861e-49 | -8.615850e-47 |
| Msa0281530 | Msa1404940 | 0.817006 | 4.124215e-52 | -8.615850e-47 |
| Msa0285330 | Msa1404940 | 0.846474 | 2.123611e-59 | -8.615850e-47 |
| Msa0287410 | Msa1404940 | 0.807873 | 4.085592e-50 | -8.615850e-47 |
| Msa0305610 | Msa1404940 | 0.801585 | 8.399846e-49 | -8.615850e-47 |
| Msa0321690 | Msa1404940 | 0.811876 | 5.622595e-51 | -8.615850e-47 |
| Msa0326480 | Msa1404940 | 0.819081 | 1.400506e-52 | -8.615850e-47 |
| Msa0334360 | Msa1404940 | 0.803642 | 3.162042e-49 | -8.615850e-47 |
| Msa0341540 | Msa1404940 | 0.803538 | 3.323714e-49 | -8.615850e-47 |
| Msa0343850 | Msa1404940 | 0.839940 | 1.173283e-57 | -8.615850e-47 |
| Msa0357900 | Msa1404940 | 0.810577 | 1.075906e-50 | -8.615850e-47 |
| Msa0363640 | Msa1404940 | 0.807601 | 4.666969e-50 | -8.615850e-47 |
| Msa1109680 | Msa1404940 | 0.831333 | 1.771599e-55 | -8.615850e-47 |
| Msa1119480 | Msa1404940 | 0.808947 | 2.411003e-50 | -8.615850e-47 |
| Msa1126830 | Msa1404940 | 0.808828 | 2.555987e-50 | -8.615850e-47 |
| Msa1135470 | Msa1404940 | 0.817013 | 4.110241e-52 | -8.615850e-47 |
| Msa1137570 | Msa1404940 | 0.817226 | 3.681432e-52 | -8.615850e-47 |
| Msa1154280 | Msa1404940 | 0.808207 | 3.468766e-50 | -8.615850e-47 |
| Msa1160590 | Msa1404940 | 0.807202 | 5.671622e-50 | -8.615850e-47 |
| Msa1165940 | Msa1404940 | 0.806988 | 6.294042e-50 | -8.615850e-47 |
| Msa1168580 | Msa1404940 | 0.840260 | 9.677842e-58 | -8.615850e-47 |
| Msa1169530 | Msa1404940 | 0.813222 | 2.854841e-51 | -8.615850e-47 |
| Msa1169550 | Msa1404940 | 0.812554 | 3.999676e-51 | -8.615850e-47 |
| Msa1207310 | Msa1404940 | 0.806008 | 1.013305e-49 | -8.615850e-47 |
| Msa1212950 | Msa1404940 | 0.837328 | 5.547548e-57 | -8.615850e-47 |
| Msa1219010 | Msa1404940 | 0.811359 | 7.283902e-51 | -8.615850e-47 |
| Msa0482940 | Msa1404940 | 0.812942 | 3.289531e-51 | -8.615850e-47 |
| Msa0504780 | Msa1404940 | 0.800051 | 1.727780e-48 | -8.615850e-47 |
| Msa0518170 | Msa1404940 | 0.802139 | 6.464382e-49 | -8.615850e-47 |
| Msa0538910 | Msa1404940 | 0.802553 | 5.312320e-49 | -8.615850e-47 |
| Msa0542290 | Msa1404940 | 0.827934 | 1.189406e-54 | -8.615850e-47 |
| Msa0547160 | Msa1404940 | 0.826089 | 3.283985e-54 | -8.615850e-47 |
| Msa0566350 | Msa1404940 | 0.800422 | 1.451822e-48 | -8.615850e-47 |
| Msa0566750 | Msa1404940 | 0.802566 | 5.280578e-49 | -8.615850e-47 |
| Msa0572840 | Msa1404940 | 0.808073 | 3.703784e-50 | -8.615850e-47 |
| Msa0581110 | Msa1404940 | 0.812657 | 3.797469e-51 | -8.615850e-47 |
| Msa0600080 | Msa1404940 | 0.805658 | 1.200192e-49 | -8.615850e-47 |
| Msa0844490 | Msa1404940 | 0.804263 | 2.349215e-49 | -8.615850e-47 |
| Msa0846230 | Msa1404940 | 0.815090 | 1.104684e-51 | -8.615850e-47 |
| Msa0861090 | Msa1404940 | 0.807007 | 6.238211e-50 | -8.615850e-47 |
| Msa0865030 | Msa1404940 | 0.835154 | 1.979036e-56 | -8.615850e-47 |
| Msa0866410 | Msa1404940 | 0.816341 | 5.812201e-52 | -8.615850e-47 |
| Msa0878510 | Msa1404940 | 0.801806 | 7.568894e-49 | -8.615850e-47 |
| Msa0903780 | Msa1404940 | 0.803463 | 3.443844e-49 | -8.615850e-47 |
| Msa0928130 | Msa1404940 | 0.802617 | 5.151965e-49 | -8.615850e-47 |
| Msa0932570 | Msa1404940 | 0.803419 | 3.518387e-49 | -8.615850e-47 |
| Msa0936390 | Msa1404940 | 0.803274 | 3.769175e-49 | -8.615850e-47 |
| Msa0962840 | Msa1404940 | 0.829193 | 5.904555e-55 | -8.615850e-47 |
| Msa0964310 | Msa1404940 | 0.801571 | 8.454731e-49 | -8.615850e-47 |
| Msa0969810 | Msa1404940 | 0.804944 | 1.693885e-49 | -8.615850e-47 |
| Msa0970530 | Msa1404940 | 0.807958 | 3.918894e-50 | -8.615850e-47 |
| Msa0970600 | Msa1404940 | 0.803765 | 2.981781e-49 | -8.615850e-47 |
| Msa0974950 | Msa1404940 | 0.808171 | 3.531017e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1404940 | MtrunA17_Chr2g0318091 | 88.889 | 81 | 9 | 0 | 100 | 180 | 1 | 81 | 4.10e-49 | 157 |
| Msa1404940 | MtrunA17_Chr7g0244771 | 90.909 | 77 | 7 | 0 | 104 | 180 | 1 | 77 | 2.28e-47 | 151 |
| Msa1404940 | MtrunA17_Chr5g0413121 | 70.526 | 95 | 8 | 1 | 86 | 180 | 2 | 76 | 3.98e-39 | 132 |
| Msa1404940 | MtrunA17_Chr7g0239401 | 93.220 | 59 | 4 | 0 | 122 | 180 | 1 | 59 | 3.03e-35 | 121 |
| Msa1404940 | MtrunA17_Chr8g0365151 | 75.000 | 80 | 16 | 2 | 125 | 203 | 1 | 77 | 3.16e-33 | 116 |
| Msa1404940 | MtrunA17_Chr7g0227751 | 37.888 | 161 | 87 | 4 | 31 | 179 | 226 | 385 | 5.55e-28 | 110 |
| Msa1404940 | MtrunA17_Chr6g0466851 | 38.509 | 161 | 86 | 4 | 31 | 179 | 594 | 753 | 9.08e-28 | 111 |
| Msa1404940 | MtrunA17_Chr4g0067771 | 65.432 | 81 | 8 | 1 | 100 | 180 | 1 | 61 | 1.17e-27 | 102 |
| Msa1404940 | MtrunA17_Chr5g0420281 | 54.945 | 91 | 39 | 2 | 32 | 121 | 6 | 95 | 1.55e-25 | 96.3 |
| Msa1404940 | MtrunA17_Chr3g0091111 | 85.714 | 56 | 8 | 0 | 125 | 180 | 1 | 56 | 4.37e-23 | 90.1 |
| Msa1404940 | MtrunA17_Chr3g0094391 | 84.211 | 57 | 9 | 0 | 124 | 180 | 40 | 96 | 1.31e-22 | 90.1 |
| Msa1404940 | MtrunA17_Chr2g0306021 | 41.818 | 110 | 60 | 2 | 74 | 179 | 3 | 112 | 1.85e-22 | 89.7 |
| Msa1404940 | MtrunA17_Chr6g0476801 | 83.929 | 56 | 9 | 0 | 125 | 180 | 1 | 56 | 2.85e-22 | 88.2 |
| Msa1404940 | MtrunA17_Chr5g0419661 | 80.357 | 56 | 11 | 0 | 125 | 180 | 1 | 56 | 3.38e-20 | 82.8 |
| Msa1404940 | MtrunA17_Chr7g0225041 | 100.000 | 31 | 0 | 0 | 1 | 31 | 1 | 31 | 8.29e-15 | 67.4 |
| Msa1404940 | MtrunA17_Chr4g0006871 | 57.377 | 61 | 24 | 1 | 188 | 246 | 1218 | 1278 | 3.43e-14 | 72.0 |
| Msa1404940 | MtrunA17_Chr7g0225061 | 96.774 | 31 | 1 | 0 | 1 | 31 | 1 | 31 | 6.67e-14 | 65.1 |
| Msa1404940 | MtrunA17_Chr1g0174651 | 46.970 | 66 | 27 | 1 | 122 | 179 | 1 | 66 | 6.51e-13 | 63.2 |
| Msa1404940 | MtrunA17_Chr7g0230951 | 31.298 | 131 | 77 | 4 | 31 | 149 | 105 | 234 | 3.10e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1404940 | AT5G40980.1 | 81.818 | 33 | 6 | 0 | 1 | 33 | 1 | 33 | 9.17e-12 | 59.7 |
Find 54 sgRNAs with CRISPR-Local
Find 399 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTAAACCTTGCTGGAAAT+TGG | 0.207500 | tig0023095:-52000 | None:intergenic |
| GGTGCCTTTACTATCAATAT+TGG | 0.314365 | tig0023095:+58941 | Msa1404940:CDS |
| CTTCTTACAACGTCAATGTT+AGG | 0.317539 | tig0023095:-58062 | None:intergenic |
| GAGAGATATGGGAGCTGATT+GGG | 0.327057 | tig0023095:+51922 | None:intergenic |
| TCTTAAACTTGTGTGTCAAT+AGG | 0.327164 | tig0023095:-57832 | None:intergenic |
| AGCTAAGATGATATATTATA+TGG | 0.327475 | tig0023095:+58019 | Msa1404940:CDS |
| TCCAATTTCCAGCAAGGTTT+AGG | 0.332962 | tig0023095:+51999 | Msa1404940:CDS |
| TATTATATGGATTCATTGTC+GGG | 0.350016 | tig0023095:+58032 | Msa1404940:CDS |
| AGAGAGATATGGGAGCTGAT+TGG | 0.363484 | tig0023095:+51921 | None:intergenic |
| AAAGCAACAGCTACAATTAC+TGG | 0.371463 | tig0023095:-51947 | None:intergenic |
| TCCACACACCTAAACCTTGC+TGG | 0.373018 | tig0023095:-52007 | None:intergenic |
| CTCTGATAAAGCCTGCTTGT+GGG | 0.375472 | tig0023095:+58886 | Msa1404940:CDS |
| AATCCCATGGATAGAAATAA+AGG | 0.380452 | tig0023095:+58238 | Msa1404940:CDS |
| ATTTATGAAAGAGATAATAT+TGG | 0.395197 | tig0023095:+58407 | Msa1404940:CDS |
| AAATCATTGTACCAGCTCTA+TGG | 0.410672 | tig0023095:-59008 | None:intergenic |
| TATACCTTTATTTCTATCCA+TGG | 0.411676 | tig0023095:-58242 | None:intergenic |
| ATAATATATCATCTTAGCTC+CGG | 0.433781 | tig0023095:-58015 | None:intergenic |
| CAGTGTCCTATGCAAACTAA+TGG | 0.442316 | tig0023095:+58357 | Msa1404940:intron |
| ATATTATATGGATTCATTGT+CGG | 0.462990 | tig0023095:+58031 | Msa1404940:CDS |
| ATGGATGCAGGCTAAATCAT+TGG | 0.471982 | tig0023095:+57973 | Msa1404940:intron |
| GCTCTGATAAAGCCTGCTTG+TGG | 0.490731 | tig0023095:+58885 | Msa1404940:CDS |
| TTGTTCATTGTGCTATCACC+AGG | 0.496005 | tig0023095:+51968 | Msa1404940:CDS |
| TTATTTACAAATTCTGACTC+AGG | 0.501533 | tig0023095:+58911 | Msa1404940:CDS |
| TGTAAATAAGCCCCACAAGC+AGG | 0.503138 | tig0023095:-58897 | None:intergenic |
| ATACCTTTATTTCTATCCAT+GGG | 0.510170 | tig0023095:-58241 | None:intergenic |
| GGAAATTGGAACAGCAATCC+TGG | 0.510917 | tig0023095:-51986 | None:intergenic |
| TTTGATCAAGCCTCGTGGGT+TGG | 0.511942 | tig0023095:+57739 | Msa1404940:CDS |
| GTGTTGCTTGTCATCAATCC+CGG | 0.525681 | tig0023095:+57996 | Msa1404940:CDS |
| TCTGATAAAGCCTGCTTGTG+GGG | 0.533364 | tig0023095:+58887 | Msa1404940:CDS |
| TGCAGAATTAATAGTAGCAA+TGG | 0.535785 | tig0023095:+58982 | Msa1404940:CDS |
| CAAGCAGGCTTTATCAGAGC+TGG | 0.535913 | tig0023095:-58882 | None:intergenic |
| TGCTGTTCCAATTTCCAGCA+AGG | 0.538634 | tig0023095:+51993 | Msa1404940:CDS |
| TAATATATCATCTTAGCTCC+GGG | 0.547193 | tig0023095:-58014 | None:intergenic |
| TTGACCAATATTGATAGTAA+AGG | 0.552159 | tig0023095:-58945 | None:intergenic |
| ATCCCCACATGTATCTCAAG+AGG | 0.558418 | tig0023095:+57781 | Msa1404940:CDS |
| TATCCTCTTGAGATACATGT+GGG | 0.563726 | tig0023095:-57784 | None:intergenic |
| CAAACTAATGGCATTGATTG+TGG | 0.574245 | tig0023095:+58369 | Msa1404940:CDS |
| AGAGATATGGGAGCTGATTG+GGG | 0.575460 | tig0023095:+51923 | None:intergenic |
| TGGATGCAGGCTAAATCATT+GGG | 0.590068 | tig0023095:+57974 | Msa1404940:intron |
| CAAAGTCAAGTATAATCCCA+TGG | 0.596399 | tig0023095:+58225 | Msa1404940:CDS |
| AAAATTTGATCAAGCCTCGT+GGG | 0.596599 | tig0023095:+57735 | Msa1404940:CDS |
| AGCAATGGTAGCCATAGAGC+TGG | 0.598223 | tig0023095:+58997 | Msa1404940:CDS |
| AAAACTCACCCTAAATTGAC+CGG | 0.600406 | tig0023095:-57872 | None:intergenic |
| TTATATGGATTCATTGTCGG+GGG | 0.605371 | tig0023095:+58034 | Msa1404940:CDS |
| GAAAATTTGATCAAGCCTCG+TGG | 0.610139 | tig0023095:+57734 | Msa1404940:CDS |
| TTATCCTCTTGAGATACATG+TGG | 0.617335 | tig0023095:-57785 | None:intergenic |
| TCAATGCCATTAGTTTGCAT+AGG | 0.630162 | tig0023095:-58363 | None:intergenic |
| ATTATATGGATTCATTGTCG+GGG | 0.633936 | tig0023095:+58033 | Msa1404940:CDS |
| GTATCTCAAGAGGATAAACA+AGG | 0.642127 | tig0023095:+57791 | Msa1404940:CDS |
| TGGGTAAAATGCAACACTGA+TGG | 0.656949 | tig0023095:+58854 | Msa1404940:CDS |
| TATATGGATTCATTGTCGGG+GGG | 0.687577 | tig0023095:+58035 | Msa1404940:CDS |
| TATCTCAAGAGGATAAACAA+GGG | 0.703934 | tig0023095:+57792 | Msa1404940:CDS |
| ATCCTCTTGAGATACATGTG+GGG | 0.710740 | tig0023095:-57783 | None:intergenic |
| AAGGGAACGACAAATACACA+TGG | 0.728581 | tig0023095:-58186 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATCAAGTAAAAAAT+TGG | + | tig0023095:53735-53754 | Msa1404940:intron | 10.0% |
| !! | AAAAAATCAAGTAAAAAATT+GGG | + | tig0023095:53736-53755 | Msa1404940:intron | 10.0% |
| !!! | GTTTTATGAAAATTAAAAAA+GGG | + | tig0023095:53872-53891 | Msa1404940:intron | 10.0% |
| !!! | AAAATATTTTGACAAAATTA+AGG | + | tig0023095:55038-55057 | Msa1404940:intron | 10.0% |
| !!! | ATCTTATTTAGTTATTTGTT+GGG | + | tig0023095:52272-52291 | Msa1404940:intron | 15.0% |
| !!! | TAATCCGTTTTTTTTTAAAT+GGG | - | tig0023095:52651-52670 | None:intergenic | 15.0% |
| !!! | AAGTGCAAAATTATTTTTTA+AGG | - | tig0023095:52733-52752 | None:intergenic | 15.0% |
| !!! | TAGGTTTTTTTTTTTTTTTG+CGG | + | tig0023095:52996-53015 | Msa1404940:intron | 15.0% |
| !! | AAATTACAAAGAAATAAGTT+TGG | + | tig0023095:53579-53598 | Msa1404940:intron | 15.0% |
| !!! | GGTTTTATGAAAATTAAAAA+AGG | + | tig0023095:53871-53890 | Msa1404940:intron | 15.0% |
| !! | AAATAAATTATCATCAATTC+TGG | - | tig0023095:54520-54539 | None:intergenic | 15.0% |
| !! | TTAAATTAAGACTTTATACT+TGG | + | tig0023095:54735-54754 | Msa1404940:intron | 15.0% |
| !!! | ATTGATTTTTGAAGATTTTA+TGG | - | tig0023095:55557-55576 | None:intergenic | 15.0% |
| !! | TTTGACATATATAAACTAAT+GGG | - | tig0023095:56969-56988 | None:intergenic | 15.0% |
| !! | GAAATATATGTAAATTATGA+TGG | + | tig0023095:57954-57973 | Msa1404940:intron | 15.0% |
| !! | ATTTATGAAAGAGATAATAT+TGG | + | tig0023095:58407-58426 | Msa1404940:CDS | 15.0% |
| !!! | CATCTTATTTAGTTATTTGT+TGG | + | tig0023095:52271-52290 | Msa1404940:intron | 20.0% |
| !!! | AGTAATAGAAAGTTATTTTC+AGG | - | tig0023095:52336-52355 | None:intergenic | 20.0% |
| !!! | CATGTTAAGAAGTATAAAAT+AGG | + | tig0023095:52387-52406 | Msa1404940:intron | 20.0% |
| !! | ATCATATTTGTAAGTTATCT+AGG | - | tig0023095:52594-52613 | None:intergenic | 20.0% |
| !! | ATCTCCCATTTAAAAAAAAA+CGG | + | tig0023095:52644-52663 | Msa1404940:intron | 20.0% |
| !!! | GTAATCCGTTTTTTTTTAAA+TGG | - | tig0023095:52652-52671 | None:intergenic | 20.0% |
| !! | TTGGTTAAAATTAAAACGTT+TGG | - | tig0023095:52789-52808 | None:intergenic | 20.0% |
| !! | TAATACTTCAGAAATCAAAA+TGG | - | tig0023095:52951-52970 | None:intergenic | 20.0% |
| !!! | TTTTGATTTCTGAAGTATTA+AGG | + | tig0023095:52951-52970 | Msa1404940:intron | 20.0% |
| !! | TTGAACATTTGTAATAAGAT+TGG | - | tig0023095:53471-53490 | None:intergenic | 20.0% |
| !! | TTATGAAAATTAAAAAAGGG+CGG | + | tig0023095:53875-53894 | Msa1404940:intron | 20.0% |
| !!! | CTAATTTCTGAAATTGAAAA+TGG | + | tig0023095:54278-54297 | Msa1404940:intron | 20.0% |
| !!! | TTCATTTTCGATTTTCATTT+CGG | - | tig0023095:54353-54372 | None:intergenic | 20.0% |
| !!! | TTCGATTTTGATTTTCATTT+TGG | + | tig0023095:54656-54675 | Msa1404940:intron | 20.0% |
| !!! | TCGATTTTGATTTTCATTTT+GGG | + | tig0023095:54657-54676 | Msa1404940:intron | 20.0% |
| !! | AACATTAAAATATCTCTGTA+TGG | + | tig0023095:54929-54948 | Msa1404940:intron | 20.0% |
| !!! | TAATAGTTCTATTTGATGTA+TGG | - | tig0023095:54968-54987 | None:intergenic | 20.0% |
| !!! | AAATATTTTATCTTACGCAA+AGG | - | tig0023095:55027-55046 | None:intergenic | 20.0% |
| !! | AACTTTCATATTAAACATCA+TGG | - | tig0023095:55087-55106 | None:intergenic | 20.0% |
| !!! | TTTAGTTCATTTTAAGATTG+TGG | - | tig0023095:55798-55817 | None:intergenic | 20.0% |
| !!! | TTTAGTTTTATCTTTAACTG+TGG | + | tig0023095:55865-55884 | Msa1404940:intron | 20.0% |
| !! | AGAATGTTATAAGTGTTATA+TGG | + | tig0023095:56460-56479 | Msa1404940:intron | 20.0% |
| !! | AGTTAAGCTATAATTCAATA+AGG | + | tig0023095:56541-56560 | Msa1404940:intron | 20.0% |
| !! | TTCAATAAGGTTAAACAATA+AGG | + | tig0023095:56554-56573 | Msa1404940:intron | 20.0% |
| !!! | TTTAGTTCATTTTAAGATTG+TGG | - | tig0023095:55798-55817 | None:intergenic | 20.0% |
| !! | CTTTGACATATATAAACTAA+TGG | - | tig0023095:56970-56989 | None:intergenic | 20.0% |
| !!! | CATTAGTTTATATATGTCAA+AGG | + | tig0023095:56968-56987 | Msa1404940:intron | 20.0% |
| !!! | TGTATGGTTCAATTTTTTTA+AGG | + | tig0023095:57072-57091 | Msa1404940:intron | 20.0% |
| !!! | ACAATTGTTTTAAGTTTGTA+TGG | + | tig0023095:57128-57147 | Msa1404940:intron | 20.0% |
| !!! | TAAAAGCAACTATTTAAGTT+AGG | + | tig0023095:57228-57247 | Msa1404940:intron | 20.0% |
| !!! | ATTTTCTCTTTCTTAAATGT+TGG | + | tig0023095:57504-57523 | Msa1404940:intron | 20.0% |
| !! | AGTTCTCTAATTTAACAATT+TGG | + | tig0023095:57577-57596 | Msa1404940:intron | 20.0% |
| !! | AAATAGGAATTATATGCTTA+AGG | - | tig0023095:57644-57663 | None:intergenic | 20.0% |
| !!! | AAGCATATAATTCCTATTTT+TGG | + | tig0023095:57645-57664 | Msa1404940:intron | 20.0% |
| !!! | AGCATATAATTCCTATTTTT+GGG | + | tig0023095:57646-57665 | Msa1404940:intron | 20.0% |
| !! | AGCTAAGATGATATATTATA+TGG | + | tig0023095:58019-58038 | Msa1404940:CDS | 20.0% |
| !! | ATATTATATGGATTCATTGT+CGG | + | tig0023095:58031-58050 | Msa1404940:CDS | 20.0% |
| !!! | AAGGTATATTTTCTAATCAA+TGG | + | tig0023095:58257-58276 | Msa1404940:intron | 20.0% |
| !!! | AAATCACATACATACATTTT+CGG | - | tig0023095:58451-58470 | None:intergenic | 20.0% |
| !! | ATATATATATATAGCTAGCT+AGG | + | tig0023095:58545-58564 | Msa1404940:intron | 20.0% |
| !!! | CTTTTATATTTGAAGTACTT+TGG | + | tig0023095:58597-58616 | Msa1404940:intron | 20.0% |
| !!! | GAGTTATTTTAAATCGTAAT+TGG | + | tig0023095:58750-58769 | Msa1404940:intron | 20.0% |
| !! | TATTGCTGAAAAACTTAAAT+TGG | + | tig0023095:58834-58853 | Msa1404940:CDS | 20.0% |
| !! | ATTGCTGAAAAACTTAAATT+GGG | + | tig0023095:58835-58854 | Msa1404940:CDS | 20.0% |
| ! | TCTTTGTCTTATAATGATCA+AGG | + | tig0023095:52187-52206 | Msa1404940:intron | 25.0% |
| ! | AAATAAGATGTCTAATCTTC+TGG | - | tig0023095:52261-52280 | None:intergenic | 25.0% |
| !!! | TAGAAAGTTATTTTCAGGTT+TGG | - | tig0023095:52331-52350 | None:intergenic | 25.0% |
| !!! | TGAAGTATTAAGGTTTTAAG+AGG | + | tig0023095:52961-52980 | Msa1404940:intron | 25.0% |
| ! | TAAGAGGTTTATGAGAAAAT+AGG | + | tig0023095:52977-52996 | Msa1404940:intron | 25.0% |
| !!! | TTTTTTTTTTTTGCGGAGAA+CGG | + | tig0023095:53003-53022 | Msa1404940:intron | 25.0% |
| ! | TTTAAATCAGTTATTGTGAG+TGG | + | tig0023095:53080-53099 | Msa1404940:intron | 25.0% |
| ! | TTAAATCAGTTATTGTGAGT+GGG | + | tig0023095:53081-53100 | Msa1404940:intron | 25.0% |
| !! | TTTCTTTTAAACTGAGTTCA+AGG | + | tig0023095:53263-53282 | Msa1404940:intron | 25.0% |
| !!! | TTTTTAAAGAGTGCTATAAC+AGG | - | tig0023095:53710-53729 | None:intergenic | 25.0% |
| ! | TAAGAAAACACTATTGTTGA+AGG | + | tig0023095:53814-53833 | Msa1404940:intron | 25.0% |
| ! | AAGAAAACACTATTGTTGAA+GGG | + | tig0023095:53815-53834 | Msa1404940:intron | 25.0% |
| !! | TTTTCACAAACACTATGTTT+GGG | + | tig0023095:53850-53869 | Msa1404940:intron | 25.0% |
| ! | ATGCATGAATTACATAACTT+AGG | + | tig0023095:54237-54256 | Msa1404940:intron | 25.0% |
| ! | TGCATGAATTACATAACTTA+GGG | + | tig0023095:54238-54257 | Msa1404940:intron | 25.0% |
| ! | TTTCAATTTCAGAAATTAGC+TGG | - | tig0023095:54277-54296 | None:intergenic | 25.0% |
| ! | CTAATTCCTGAAATTGAAAA+TGG | + | tig0023095:54319-54338 | Msa1404940:intron | 25.0% |
| !! | CATTTTCCATTTTCAATTTC+AGG | - | tig0023095:54328-54347 | None:intergenic | 25.0% |
| !! | CTCACATCAAAAGAAATTTT+CGG | - | tig0023095:54376-54395 | None:intergenic | 25.0% |
| ! | ATTTGTAGATGAGTAACAAA+GGG | - | tig0023095:54602-54621 | None:intergenic | 25.0% |
| ! | AATTTGTAGATGAGTAACAA+AGG | - | tig0023095:54603-54622 | None:intergenic | 25.0% |
| ! | GGCAAAATGTACAAAATTTA+GGG | + | tig0023095:54762-54781 | Msa1404940:intron | 25.0% |
| ! | TATAACCAACCATATTAACA+TGG | + | tig0023095:54879-54898 | Msa1404940:intron | 25.0% |
| ! | GGTTTGATCAATTTGTATTA+TGG | - | tig0023095:54907-54926 | None:intergenic | 25.0% |
| !!! | ACAGAGATATTTTAATGTTG+TGG | - | tig0023095:54928-54947 | None:intergenic | 25.0% |
| ! | GACCAATTGATTATTAAAGA+AGG | + | tig0023095:55107-55126 | Msa1404940:intron | 25.0% |
| ! | AATAACATTCTCAACTACAA+TGG | - | tig0023095:55133-55152 | None:intergenic | 25.0% |
| ! | ATTAATGACTTTAACGAGTT+TGG | + | tig0023095:55155-55174 | Msa1404940:intron | 25.0% |
| ! | TTAATGACTTTAACGAGTTT+GGG | + | tig0023095:55156-55175 | Msa1404940:intron | 25.0% |
| ! | AGAGGAATGTAAAATTATGT+TGG | - | tig0023095:55620-55639 | None:intergenic | 25.0% |
| !! | ACATAATTTTACATTCCTCT+TGG | + | tig0023095:55620-55639 | Msa1404940:intron | 25.0% |
| ! | ACAATATAGGCTAGAAAATA+AGG | - | tig0023095:56312-56331 | None:intergenic | 25.0% |
| !! | TCATTGATGGTACAATTATA+TGG | - | tig0023095:56825-56844 | None:intergenic | 25.0% |
| ! | TGTTGTGAGTGTAATTTAAT+AGG | - | tig0023095:56930-56949 | None:intergenic | 25.0% |
| ! | TAACAATTGAGCTAGTATTT+GGG | - | tig0023095:57103-57122 | None:intergenic | 25.0% |
| ! | GAAAGATATCAAATTTGCAA+TGG | + | tig0023095:57259-57278 | Msa1404940:intron | 25.0% |
| ! | GGACTATATGTATATATCTT+TGG | + | tig0023095:57280-57299 | Msa1404940:intron | 25.0% |
| ! | TACAAACTGAGAATAAACTA+TGG | + | tig0023095:57527-57546 | Msa1404940:intron | 25.0% |
| ! | ACAAACTGAGAATAAACTAT+GGG | + | tig0023095:57528-57547 | Msa1404940:intron | 25.0% |
| ! | GATGACTAAATTTGAAAATG+TGG | + | tig0023095:57915-57934 | Msa1404940:intron | 25.0% |
| ! | ATAATATATCATCTTAGCTC+CGG | - | tig0023095:58018-58037 | None:intergenic | 25.0% |
| ! | TATTATATGGATTCATTGTC+GGG | + | tig0023095:58032-58051 | Msa1404940:CDS | 25.0% |
| ! | ATCAACTTCAAATGAGTAAT+AGG | - | tig0023095:58151-58170 | None:intergenic | 25.0% |
| !!! | ATACCTTTATTTCTATCCAT+GGG | - | tig0023095:58244-58263 | None:intergenic | 25.0% |
| !!! | TATACCTTTATTTCTATCCA+TGG | - | tig0023095:58245-58264 | None:intergenic | 25.0% |
| !!! | TTTTTTGACAACGTAATCAA+TGG | + | tig0023095:58284-58303 | Msa1404940:intron | 25.0% |
| !!! | GGTATTTTTAATTCATCATG+TGG | + | tig0023095:58305-58324 | Msa1404940:intron | 25.0% |
| !! | AATCACATACATACATTTTC+GGG | - | tig0023095:58450-58469 | None:intergenic | 25.0% |
| !!! | AACTAGCTTATCTTTAGAAT+AGG | - | tig0023095:58640-58659 | None:intergenic | 25.0% |
| ! | TTATTTACAAATTCTGACTC+AGG | + | tig0023095:58911-58930 | Msa1404940:CDS | 25.0% |
| !! | TTGACCAATATTGATAGTAA+AGG | - | tig0023095:58948-58967 | None:intergenic | 25.0% |
| ! | AAGGTCTTACCTATTTTGTA+CGG | + | tig0023095:52206-52225 | Msa1404940:intron | 30.0% |
| ! | ACCTATTTTGTACGGTTTAA+TGG | + | tig0023095:52214-52233 | Msa1404940:intron | 30.0% |
| ! | CCTATTTTGTACGGTTTAAT+GGG | + | tig0023095:52215-52234 | Msa1404940:intron | 30.0% |
| TACGATACAACGAAAAATGA+CGG | + | tig0023095:52419-52438 | Msa1404940:intron | 30.0% | |
| AACATAGGCAAACAAAATGA+CGG | + | tig0023095:52526-52545 | Msa1404940:intron | 30.0% | |
| TCAACATGAATGTGTTATCT+AGG | - | tig0023095:52625-52644 | None:intergenic | 30.0% | |
| TTGATCTTGAGAATCTCTAT+TGG | - | tig0023095:52812-52831 | None:intergenic | 30.0% | |
| ! | AGAATGTTTTCATTTGCTTG+CGG | + | tig0023095:52855-52874 | Msa1404940:intron | 30.0% |
| AAATATTCTCCTAAGATGAG+AGG | + | tig0023095:52894-52913 | Msa1404940:intron | 30.0% | |
| CTCAAATGTCATAATTAGCA+GGG | - | tig0023095:53133-53152 | None:intergenic | 30.0% | |
| TAGTAACCATTACCAAATGA+AGG | + | tig0023095:53199-53218 | Msa1404940:intron | 30.0% | |
| TTCTTACCTTCATTTGGTAA+TGG | - | tig0023095:53208-53227 | None:intergenic | 30.0% | |
| ! | GTGTTTTTCTTACCTTCATT+TGG | - | tig0023095:53214-53233 | None:intergenic | 30.0% |
| AAGGTAAGAAAAACACAAGA+AGG | + | tig0023095:53218-53237 | Msa1404940:intron | 30.0% | |
| AGGTAAGAAAAACACAAGAA+GGG | + | tig0023095:53219-53238 | Msa1404940:intron | 30.0% | |
| GATTATAGTGAAAATCTCCT+TGG | - | tig0023095:53449-53468 | None:intergenic | 30.0% | |
| AACACTTGATATACAATCAG+TGG | + | tig0023095:53606-53625 | Msa1404940:intron | 30.0% | |
| !! | CACAATTTTAATAGCGTTTC+TGG | + | tig0023095:53654-53673 | Msa1404940:intron | 30.0% |
| AGAAAACACTATTGTTGAAG+GGG | + | tig0023095:53816-53835 | Msa1404940:intron | 30.0% | |
| ! | GTTTTCACAAACACTATGTT+TGG | + | tig0023095:53849-53868 | Msa1404940:intron | 30.0% |
| ! | TTCCAGAATTGTGAGTTTTA+TGG | + | tig0023095:54407-54426 | Msa1404940:intron | 30.0% |
| !! | TCCAGAATTGTGAGTTTTAT+GGG | + | tig0023095:54408-54427 | Msa1404940:intron | 30.0% |
| !!! | TGAGTTTTATGGGTTTTGTT+CGG | + | tig0023095:54418-54437 | Msa1404940:intron | 30.0% |
| CAAAAACAAACTCTCAATTC+TGG | - | tig0023095:54466-54485 | None:intergenic | 30.0% | |
| GAGTAGTAAAAAGTGAATTC+TGG | - | tig0023095:54492-54511 | None:intergenic | 30.0% | |
| GAATAAAACAATGTCACGAA+AGG | - | tig0023095:54639-54658 | None:intergenic | 30.0% | |
| TTAAGACTTTATACTTGGAC+TGG | + | tig0023095:54740-54759 | Msa1404940:intron | 30.0% | |
| TAAGACTTTATACTTGGACT+GGG | + | tig0023095:54741-54760 | Msa1404940:intron | 30.0% | |
| GGGCAAAATGTACAAAATTT+AGG | + | tig0023095:54761-54780 | Msa1404940:intron | 30.0% | |
| !! | ATTATGGTGCCATGTTAATA+TGG | - | tig0023095:54891-54910 | None:intergenic | 30.0% |
| ATCTCTGTATGGTATAAAGT+TGG | + | tig0023095:54940-54959 | Msa1404940:intron | 30.0% | |
| GGCCTTCTTTAATAATCAAT+TGG | - | tig0023095:55112-55131 | None:intergenic | 30.0% | |
| AGCTAATACCTCTTGATTAA+GGG | - | tig0023095:55342-55361 | None:intergenic | 30.0% | |
| AAGCTAATACCTCTTGATTA+AGG | - | tig0023095:55343-55362 | None:intergenic | 30.0% | |
| AAAATGTGTGTTAAAGAGTG+AGG | + | tig0023095:55366-55385 | Msa1404940:intron | 30.0% | |
| !!! | ATTGAGTTTTTTCAAGGGTT+GGG | - | tig0023095:55420-55439 | None:intergenic | 30.0% |
| AACCCTTGAAAAAACTCAAT+CGG | + | tig0023095:55420-55439 | Msa1404940:intron | 30.0% | |
| ATCCGATGGAAAAAATCAAT+CGG | + | tig0023095:55451-55470 | Msa1404940:intron | 30.0% | |
| !!! | ATCCGATTGATTTTTTCCAT+CGG | - | tig0023095:55456-55475 | None:intergenic | 30.0% |
| CGATTTAAATATGTACCAAG+AGG | - | tig0023095:55638-55657 | None:intergenic | 30.0% | |
| TTGAGCGTTATGTTACATTT+AGG | + | tig0023095:55675-55694 | Msa1404940:intron | 30.0% | |
| TATCTTTAACTGTGGTTGTT+TGG | + | tig0023095:55873-55892 | Msa1404940:intron | 30.0% | |
| !!! | TGGCTGATTTTGATTTTTTG+AGG | + | tig0023095:55898-55917 | Msa1404940:intron | 30.0% |
| !!! | GTCTTATTTTGCTACTGTTT+TGG | + | tig0023095:56009-56028 | Msa1404940:intron | 30.0% |
| TGCTGCACTAAAAAGAAAAT+TGG | - | tig0023095:56075-56094 | None:intergenic | 30.0% | |
| ! | TTTTCCGTTCTTCTTTAGTT+TGG | + | tig0023095:56182-56201 | Msa1404940:intron | 30.0% |
| TACTCCAAACTAAAGAAGAA+CGG | - | tig0023095:56189-56208 | None:intergenic | 30.0% | |
| CTACAACAAAGAAATAGCAA+CGG | - | tig0023095:56241-56260 | None:intergenic | 30.0% | |
| ! | TTGTAGCATTTAGTTTCATG+TGG | + | tig0023095:56255-56274 | Msa1404940:intron | 30.0% |
| TGCTACATTTGTACCTATTT+CGG | + | tig0023095:56338-56357 | Msa1404940:intron | 30.0% | |
| CTGTTTCAGTTTCCTTTATT+TGG | + | tig0023095:56364-56383 | Msa1404940:intron | 30.0% | |
| CTTAAGACGTAACCAAATAA+AGG | - | tig0023095:56379-56398 | None:intergenic | 30.0% | |
| AATTTATTAACCCCGCTTAT+TGG | - | tig0023095:56404-56423 | None:intergenic | 30.0% | |
| ACAACTTAACTTACTGGATT+TGG | + | tig0023095:57025-57044 | Msa1404940:intron | 30.0% | |
| GTAACAATTGAGCTAGTATT+TGG | - | tig0023095:57104-57123 | None:intergenic | 30.0% | |
| AAAACTCAAGTCGAAATAGA+GGG | - | tig0023095:57166-57185 | None:intergenic | 30.0% | |
| !! | TATTTCGACTTGAGTTTTGA+GGG | + | tig0023095:57168-57187 | Msa1404940:intron | 30.0% |
| ! | AAGCAACTATTTAAGTTAGG+TGG | + | tig0023095:57231-57250 | Msa1404940:intron | 30.0% |
| ! | CTATTTAAGTTAGGTGGTTA+TGG | + | tig0023095:57237-57256 | Msa1404940:intron | 30.0% |
| TTACTTAGACACAAGTGTTT+GGG | - | tig0023095:57459-57478 | None:intergenic | 30.0% | |
| TCAATAATCCCATAGACTTT+GGG | - | tig0023095:57555-57574 | None:intergenic | 30.0% | |
| ! | AATTTGGAGTAGTTGTATGT+TGG | + | tig0023095:57593-57612 | Msa1404940:intron | 30.0% |
| TATCTCAAGAGGATAAACAA+GGG | + | tig0023095:57792-57811 | Msa1404940:CDS | 30.0% | |
| TCTTAAACTTGTGTGTCAAT+AGG | - | tig0023095:57835-57854 | None:intergenic | 30.0% | |
| !! | ATGTAAATTATGATGGATGC+AGG | + | tig0023095:57961-57980 | Msa1404940:intron | 30.0% |
| TAATATATCATCTTAGCTCC+GGG | - | tig0023095:58017-58036 | None:intergenic | 30.0% | |
| ATTATATGGATTCATTGTCG+GGG | + | tig0023095:58033-58052 | Msa1404940:CDS | 30.0% | |
| !!! | CTTGACTTTGATTTTGACTT+GGG | - | tig0023095:58215-58234 | None:intergenic | 30.0% |
| !!! | ACTTGACTTTGATTTTGACT+TGG | - | tig0023095:58216-58235 | None:intergenic | 30.0% |
| AATCCCATGGATAGAAATAA+AGG | + | tig0023095:58238-58257 | Msa1404940:CDS | 30.0% | |
| ! | ATCACATACATACATTTTCG+GGG | - | tig0023095:58449-58468 | None:intergenic | 30.0% |
| ! | TTCTAAAGATAAGCTAGTTG+AGG | + | tig0023095:58641-58660 | Msa1404940:intron | 30.0% |
| CGTTTCAAATTATATGACAC+AGG | + | tig0023095:58805-58824 | Msa1404940:intron | 30.0% | |
| !!! | AATTCTGACTCAGGTTTTTT+AGG | + | tig0023095:58920-58939 | Msa1404940:CDS | 30.0% |
| TGCAGAATTAATAGTAGCAA+TGG | + | tig0023095:58982-59001 | Msa1404940:CDS | 30.0% | |
| AAAGCAACAGCTACAATTAC+TGG | - | tig0023095:51950-51969 | None:intergenic | 35.0% | |
| ! | TTTGGTAACATGAGTACTAG+CGG | + | tig0023095:52031-52050 | Msa1404940:intron | 35.0% |
| CCCATTAAACCGTACAAAAT+AGG | - | tig0023095:52218-52237 | None:intergenic | 35.0% | |
| TTTGTTGGGAATCTTGATAG+AGG | + | tig0023095:52286-52305 | Msa1404940:intron | 35.0% | |
| TTCACAAAAGTTTGTGCAAG+AGG | - | tig0023095:52460-52479 | None:intergenic | 35.0% | |
| CTATGTTAATGAGCATCTGA+AGG | - | tig0023095:52513-52532 | None:intergenic | 35.0% | |
| CTTCAGATGCTCATTAACAT+AGG | + | tig0023095:52511-52530 | Msa1404940:intron | 35.0% | |
| TCTTGAGAATCTCTATTGGT+TGG | - | tig0023095:52808-52827 | None:intergenic | 35.0% | |
| TCTAAATGTGTTGAGTGCAA+TGG | - | tig0023095:52838-52857 | None:intergenic | 35.0% | |
| GGTAAAGTATGAGAAAACGA+AGG | + | tig0023095:53034-53053 | Msa1404940:intron | 35.0% | |
| CCTCAAATGTCATAATTAGC+AGG | - | tig0023095:53134-53153 | None:intergenic | 35.0% | |
| CCTGCTAATTATGACATTTG+AGG | + | tig0023095:53131-53150 | Msa1404940:intron | 35.0% | |
| GGTAAGAAAAACACAAGAAG+GGG | + | tig0023095:53220-53239 | Msa1404940:intron | 35.0% | |
| TTAAACTGAGTTCAAGGTTC+AGG | + | tig0023095:53269-53288 | Msa1404940:intron | 35.0% | |
| TAAACTGAGTTCAAGGTTCA+GGG | + | tig0023095:53270-53289 | Msa1404940:intron | 35.0% | |
| AAGACACAAAGCAATTATCC+TGG | + | tig0023095:53381-53400 | Msa1404940:intron | 35.0% | |
| AACTACTTCTGAATTGTGGA+AGG | - | tig0023095:53409-53428 | None:intergenic | 35.0% | |
| ACTGAACTACTTCTGAATTG+TGG | - | tig0023095:53413-53432 | None:intergenic | 35.0% | |
| ! | AAATCTCCTTGGAAGTACAA+GGG | - | tig0023095:53438-53457 | None:intergenic | 35.0% |
| ! | AAAATCTCCTTGGAAGTACA+AGG | - | tig0023095:53439-53458 | None:intergenic | 35.0% |
| ACTTGATATACAATCAGTGG+TGG | + | tig0023095:53609-53628 | Msa1404940:intron | 35.0% | |
| !!! | TTTTGGAGTGTTGTTTTGGA+CGG | - | tig0023095:53972-53991 | None:intergenic | 35.0% |
| !!! | TGAGTTTTGGAGTGTTGTTT+TGG | - | tig0023095:53976-53995 | None:intergenic | 35.0% |
| ! | AGGAAGTGGTTTTCAGTTTT+GGG | - | tig0023095:54077-54096 | None:intergenic | 35.0% |
| ! | AAGGAAGTGGTTTTCAGTTT+TGG | - | tig0023095:54078-54097 | None:intergenic | 35.0% |
| ACCCATAAAACTCACAATTC+TGG | - | tig0023095:54412-54431 | None:intergenic | 35.0% | |
| !!! | GAGTTTTATGGGTTTTGTTC+GGG | + | tig0023095:54419-54438 | Msa1404940:intron | 35.0% |
| ATGAGTAACAAAGGGAGAAT+AGG | - | tig0023095:54594-54613 | None:intergenic | 35.0% | |
| AGGTAGAAATTACAACTCTG+TGG | + | tig0023095:55058-55077 | Msa1404940:intron | 35.0% | |
| GGTAGAAATTACAACTCTGT+GGG | + | tig0023095:55059-55078 | Msa1404940:intron | 35.0% | |
| ATGTAGCAACAGTTTACAAG+AGG | + | tig0023095:55210-55229 | Msa1404940:intron | 35.0% | |
| TCTTGATTAAGGGGTTTAGA+AGG | - | tig0023095:55332-55351 | None:intergenic | 35.0% | |
| TTCTAAACCCCTTAATCAAG+AGG | + | tig0023095:55331-55350 | Msa1404940:intron | 35.0% | |
| GCTAATACCTCTTGATTAAG+GGG | - | tig0023095:55341-55360 | None:intergenic | 35.0% | |
| !!! | GATTGAGTTTTTTCAAGGGT+TGG | - | tig0023095:55421-55440 | None:intergenic | 35.0% |
| ACCCTTGAAAAAACTCAATC+GGG | + | tig0023095:55421-55440 | Msa1404940:intron | 35.0% | |
| !!! | TCCCGATTGAGTTTTTTCAA+GGG | - | tig0023095:55425-55444 | None:intergenic | 35.0% |
| ATCGGATTGTATCTCTTGAT+AGG | + | tig0023095:55469-55488 | Msa1404940:intron | 35.0% | |
| CAATTTGACATGTGTTCCAA+TGG | + | tig0023095:55573-55592 | Msa1404940:intron | 35.0% | |
| GCATCAATGTGAAAGTGAAT+TGG | + | tig0023095:55820-55839 | Msa1404940:intron | 35.0% | |
| !!! | TTCTGCTGCTGTTTTTATAC+TGG | + | tig0023095:55967-55986 | Msa1404940:intron | 35.0% |
| !! | TTTATACTGGTTTGTTGCAG+TGG | + | tig0023095:55980-55999 | Msa1404940:intron | 35.0% |
| !! | TTCATTTTTCCCCCAGTTTT+GGG | + | tig0023095:56124-56143 | Msa1404940:intron | 35.0% |
| ACATTACACATCCCAAAACT+GGG | - | tig0023095:56138-56157 | None:intergenic | 35.0% | |
| AACATTACACATCCCAAAAC+TGG | - | tig0023095:56139-56158 | None:intergenic | 35.0% | |
| AATGTTGTTCAGTGAAGTAG+CGG | + | tig0023095:56153-56172 | Msa1404940:intron | 35.0% | |
| TAGTTTCATGTGGTCTCAAA+TGG | + | tig0023095:56265-56284 | Msa1404940:intron | 35.0% | |
| AGTTTCATGTGGTCTCAAAT+GGG | + | tig0023095:56266-56285 | Msa1404940:intron | 35.0% | |
| AGTGTTATATGGTGATCATG+AGG | + | tig0023095:56471-56490 | Msa1404940:intron | 35.0% | |
| GTGTTATATGGTGATCATGA+GGG | + | tig0023095:56472-56491 | Msa1404940:intron | 35.0% | |
| ATGGAAGTTCTCTAGTATTG+AGG | + | tig0023095:56497-56516 | Msa1404940:intron | 35.0% | |
| ATAGCTTAACTCAAGAGCAA+AGG | - | tig0023095:56532-56551 | None:intergenic | 35.0% | |
| GCATCAATGTGAAAGTGAAT+TGG | + | tig0023095:55820-55839 | Msa1404940:intron | 35.0% | |
| TATCTGCACACATGTTGAAT+GGG | - | tig0023095:57006-57025 | None:intergenic | 35.0% | |
| GCAGATACAACTTAACTTAC+TGG | + | tig0023095:57019-57038 | Msa1404940:intron | 35.0% | |
| GTCAATCACTTTCACAATAG+AGG | + | tig0023095:57047-57066 | Msa1404940:intron | 35.0% | |
| TTTCACAATAGAGGCTTGTA+TGG | + | tig0023095:57056-57075 | Msa1404940:intron | 35.0% | |
| CAAAACTCAAGTCGAAATAG+AGG | - | tig0023095:57167-57186 | None:intergenic | 35.0% | |
| !! | CTATTTCGACTTGAGTTTTG+AGG | + | tig0023095:57167-57186 | Msa1404940:intron | 35.0% |
| CTTACTTAGACACAAGTGTT+TGG | - | tig0023095:57460-57479 | None:intergenic | 35.0% | |
| CTCAATAATCCCATAGACTT+TGG | - | tig0023095:57556-57575 | None:intergenic | 35.0% | |
| ATGTTGGAATCCTTAGTTGT+TGG | + | tig0023095:57609-57628 | Msa1404940:intron | 35.0% | |
| TGTTGGAATCCTTAGTTGTT+GGG | + | tig0023095:57610-57629 | Msa1404940:intron | 35.0% | |
| AACAACACACTCCCAAAAAT+AGG | - | tig0023095:57660-57679 | None:intergenic | 35.0% | |
| !! | ATTTTTGGGAGTGTGTTGTT+TGG | + | tig0023095:57660-57679 | Msa1404940:intron | 35.0% |
| AAAATTTGATCAAGCCTCGT+GGG | + | tig0023095:57735-57754 | Msa1404940:CDS | 35.0% | |
| TATCCTCTTGAGATACATGT+GGG | - | tig0023095:57787-57806 | None:intergenic | 35.0% | |
| TTATCCTCTTGAGATACATG+TGG | - | tig0023095:57788-57807 | None:intergenic | 35.0% | |
| GTATCTCAAGAGGATAAACA+AGG | + | tig0023095:57791-57810 | Msa1404940:CDS | 35.0% | |
| !! | ATTTTTGCACCGGTCAATTT+AGG | + | tig0023095:57863-57882 | Msa1404940:CDS | 35.0% |
| !! | TTTTTGCACCGGTCAATTTA+GGG | + | tig0023095:57864-57883 | Msa1404940:CDS | 35.0% |
| AAAACTCACCCTAAATTGAC+CGG | - | tig0023095:57875-57894 | None:intergenic | 35.0% | |
| TTATATGGATTCATTGTCGG+GGG | + | tig0023095:58034-58053 | Msa1404940:CDS | 35.0% | |
| CTTCTTACAACGTCAATGTT+AGG | - | tig0023095:58065-58084 | None:intergenic | 35.0% | |
| !!! | TGATTTTGACTTGGGATGAA+GGG | - | tig0023095:58207-58226 | None:intergenic | 35.0% |
| !!! | TTGATTTTGACTTGGGATGA+AGG | - | tig0023095:58208-58227 | None:intergenic | 35.0% |
| CAAAGTCAAGTATAATCCCA+TGG | + | tig0023095:58225-58244 | Msa1404940:CDS | 35.0% | |
| !! | TCAATGCCATTAGTTTGCAT+AGG | - | tig0023095:58366-58385 | None:intergenic | 35.0% |
| !! | CAAACTAATGGCATTGATTG+TGG | + | tig0023095:58369-58388 | Msa1404940:CDS | 35.0% |
| ACTAAGAAACTCGACCATAA+AGG | - | tig0023095:58685-58704 | None:intergenic | 35.0% | |
| TAAATCGTAATTGGTTGTGC+TGG | + | tig0023095:58759-58778 | Msa1404940:intron | 35.0% | |
| GGTGCCTTTACTATCAATAT+TGG | + | tig0023095:58941-58960 | Msa1404940:CDS | 35.0% | |
| TTGTTCATTGTGCTATCACC+AGG | + | tig0023095:51968-51987 | Msa1404940:CDS | 40.0% | |
| TCCAATTTCCAGCAAGGTTT+AGG | + | tig0023095:51999-52018 | Msa1404940:CDS | 40.0% | |
| ACCTAAACCTTGCTGGAAAT+TGG | - | tig0023095:52003-52022 | None:intergenic | 40.0% | |
| AGGTTTAGGTGTGTGGAATT+TGG | + | tig0023095:52013-52032 | Msa1404940:intron | 40.0% | |
| ACCATCTTGATTGTTGCAGT+TGG | + | tig0023095:52097-52116 | Msa1404940:intron | 40.0% | |
| ACCAACTGCAACAATCAAGA+TGG | - | tig0023095:52101-52120 | None:intergenic | 40.0% | |
| !! | GGTTTAATGGGCTATTCAGA+CGG | + | tig0023095:52227-52246 | Msa1404940:intron | 40.0% |
| AATGAGCATCTGAAGGATGA+AGG | - | tig0023095:52506-52525 | None:intergenic | 40.0% | |
| AAATGTGTTGAGTGCAATGG+CGG | - | tig0023095:52835-52854 | None:intergenic | 40.0% | |
| TTCTGCAGTTATCGACGAAT+CGG | - | tig0023095:52924-52943 | None:intergenic | 40.0% | |
| ATTGTGAGTGGGAAGTTCAA+AGG | + | tig0023095:53092-53111 | Msa1404940:intron | 40.0% | |
| ! | ATTATGACATTTGAGGCGAG+TGG | + | tig0023095:53138-53157 | Msa1404940:intron | 40.0% |
| ! | AATCTCCTTGGAAGTACAAG+GGG | - | tig0023095:53437-53456 | None:intergenic | 40.0% |
| ! | TTTGAAGTCTCTTGCTTGTG+TGG | - | tig0023095:53494-53513 | None:intergenic | 40.0% |
| ! | ATCAGTGGTGGTCACAATTT+TGG | + | tig0023095:53621-53640 | Msa1404940:intron | 40.0% |
| !!! | TTGTTTTGGACGGTGTCTTT+TGG | - | tig0023095:53962-53981 | None:intergenic | 40.0% |
| !!! | TGGTTTTCAGTTTTGGGAGA+AGG | - | tig0023095:54071-54090 | None:intergenic | 40.0% |
| TGAAAACCACTTCCTTGCTT+CGG | + | tig0023095:54082-54101 | Msa1404940:intron | 40.0% | |
| !!! | ATGGGTTTTGTTCGGGATAT+TGG | + | tig0023095:54426-54445 | Msa1404940:intron | 40.0% |
| !!! | TGGGTTTTGTTCGGGATATT+GGG | + | tig0023095:54427-54446 | Msa1404940:intron | 40.0% |
| ! | GGATATCAGTGACTTGTACA+CGG | + | tig0023095:54783-54802 | Msa1404940:intron | 40.0% |
| !! | TGGTGCCATGTTAATATGGT+TGG | - | tig0023095:54887-54906 | None:intergenic | 40.0% |
| ! | CTTTAACGAGTTTGGGTTAG+AGG | + | tig0023095:55163-55182 | Msa1404940:intron | 40.0% |
| TAAGGGGTTTAGAAGGTTCA+GGG | - | tig0023095:55325-55344 | None:intergenic | 40.0% | |
| TTAAGGGGTTTAGAAGGTTC+AGG | - | tig0023095:55326-55345 | None:intergenic | 40.0% | |
| !!! | CTCCCGATTGAGTTTTTTCA+AGG | - | tig0023095:55426-55445 | None:intergenic | 40.0% |
| TCAAAGGTCTCTCGGTTTAA+CGG | - | tig0023095:55519-55538 | None:intergenic | 40.0% | |
| TGATTATGCCAATGCACCAT+TGG | - | tig0023095:55592-55611 | None:intergenic | 40.0% | |
| AACCTAGCTAGTTCACACTT+TGG | + | tig0023095:55726-55745 | Msa1404940:intron | 40.0% | |
| ACCTAGCTAGTTCACACTTT+GGG | + | tig0023095:55727-55746 | Msa1404940:intron | 40.0% | |
| TTAACTGTGGTTGTTTGGTC+TGG | + | tig0023095:55878-55897 | Msa1404940:intron | 40.0% | |
| !!! | TGGTTTGTTGCAGTGGATTT+TGG | + | tig0023095:55987-56006 | Msa1404940:intron | 40.0% |
| !! | TTTTTAGTGCAGCAGCTGTA+TGG | + | tig0023095:56081-56100 | Msa1404940:intron | 40.0% |
| ! | TTTTAGTGCAGCAGCTGTAT+GGG | + | tig0023095:56082-56101 | Msa1404940:intron | 40.0% |
| !! | CTTCATTTTTCCCCCAGTTT+TGG | + | tig0023095:56123-56142 | Msa1404940:intron | 40.0% |
| ATTACACATCCCAAAACTGG+GGG | - | tig0023095:56136-56155 | None:intergenic | 40.0% | |
| CATTACACATCCCAAAACTG+GGG | - | tig0023095:56137-56156 | None:intergenic | 40.0% | |
| GTTATTGCCTTAGTTGCTTC+AGG | + | tig0023095:56215-56234 | Msa1404940:intron | 40.0% | |
| TGTAGCAGAGAGGACAATAT+AGG | - | tig0023095:56325-56344 | None:intergenic | 40.0% | |
| TAGGTACAAATGTAGCAGAG+AGG | - | tig0023095:56335-56354 | None:intergenic | 40.0% | |
| ACGTCTTAAGCTCCAATAAG+CGG | + | tig0023095:56389-56408 | Msa1404940:intron | 40.0% | |
| TATGGTGATCATGAGGGTTA+TGG | + | tig0023095:56478-56497 | Msa1404940:intron | 40.0% | |
| AGCAGAGATGCATTCATTGA+TGG | - | tig0023095:56838-56857 | None:intergenic | 40.0% | |
| ! | CTAGCTCTCACAAAAAGTGT+TGG | - | tig0023095:56891-56910 | None:intergenic | 40.0% |
| GTATCTGCACACATGTTGAA+TGG | - | tig0023095:57007-57026 | None:intergenic | 40.0% | |
| ! | TCTTTGGAGAAAGTCTTGCA+TGG | + | tig0023095:57296-57315 | Msa1404940:intron | 40.0% |
| TTTATGTGTGTGTGCCTAAG+TGG | - | tig0023095:57341-57360 | None:intergenic | 40.0% | |
| !! | GTGCTGTTTGTTCTGTTTCA+AGG | + | tig0023095:57702-57721 | Msa1404940:intron | 40.0% |
| GAAAATTTGATCAAGCCTCG+TGG | + | tig0023095:57734-57753 | Msa1404940:CDS | 40.0% | |
| !! | AACTTATTTTCCAACCCACG+AGG | - | tig0023095:57752-57771 | None:intergenic | 40.0% |
| ATCCTCTTGAGATACATGTG+GGG | - | tig0023095:57786-57805 | None:intergenic | 40.0% | |
| !! | GAAGAAGCTGATTTTTGCAC+CGG | + | tig0023095:57853-57872 | Msa1404940:CDS | 40.0% |
| ATGGATGCAGGCTAAATCAT+TGG | + | tig0023095:57973-57992 | Msa1404940:intron | 40.0% | |
| TGGATGCAGGCTAAATCATT+GGG | + | tig0023095:57974-57993 | Msa1404940:intron | 40.0% | |
| TATATGGATTCATTGTCGGG+GGG | + | tig0023095:58035-58054 | Msa1404940:CDS | 40.0% | |
| AAGGGAACGACAAATACACA+TGG | - | tig0023095:58189-58208 | None:intergenic | 40.0% | |
| !! | CATTAGTTTGCATAGGACAC+TGG | - | tig0023095:58359-58378 | None:intergenic | 40.0% |
| CAGTGTCCTATGCAAACTAA+TGG | + | tig0023095:58357-58376 | Msa1404940:intron | 40.0% | |
| TGGGTAAAATGCAACACTGA+TGG | + | tig0023095:58854-58873 | Msa1404940:CDS | 40.0% | |
| GGAAATTGGAACAGCAATCC+TGG | - | tig0023095:51989-52008 | None:intergenic | 45.0% | |
| TGCTGTTCCAATTTCCAGCA+AGG | + | tig0023095:51993-52012 | Msa1404940:CDS | 45.0% | |
| ! | GGGAATCTTGATAGAGGCAT+TGG | + | tig0023095:52292-52311 | Msa1404940:intron | 45.0% |
| ! | AAAAATGACGGAGCCTTGTG+TGG | + | tig0023095:52431-52450 | Msa1404940:intron | 45.0% |
| ATCGGTGAACCTCTCATCTT+AGG | - | tig0023095:52906-52925 | None:intergenic | 45.0% | |
| TTTGCGGAGAACGGTTGAAA+AGG | + | tig0023095:53012-53031 | Msa1404940:intron | 45.0% | |
| TTGCGGAGAACGGTTGAAAA+GGG | + | tig0023095:53013-53032 | Msa1404940:intron | 45.0% | |
| TTCAGGGTGTGATAGAGTTC+AGG | + | tig0023095:53286-53305 | Msa1404940:intron | 45.0% | |
| TCAGGGTGTGATAGAGTTCA+GGG | + | tig0023095:53287-53306 | Msa1404940:intron | 45.0% | |
| CTGTTCAGAGTCTAATGCAG+TGG | + | tig0023095:53319-53338 | Msa1404940:intron | 45.0% | |
| TCTGAATTGTGGAAGGAACC+AGG | - | tig0023095:53402-53421 | None:intergenic | 45.0% | |
| ! | ATCTCCTTGGAAGTACAAGG+GGG | - | tig0023095:53436-53455 | None:intergenic | 45.0% |
| ! | TTTGGACGGTGTCTTTTGGA+AGG | - | tig0023095:53958-53977 | None:intergenic | 45.0% |
| ! | GTGAGTGAGTGAGTGAGTTT+TGG | - | tig0023095:53989-54008 | None:intergenic | 45.0% |
| TTCTGACATTGACCGAAGCA+AGG | - | tig0023095:54040-54059 | None:intergenic | 45.0% | |
| CGCTTTCTCTCTTTCTTCTC+TGG | + | tig0023095:54177-54196 | Msa1404940:intron | 45.0% | |
| !!! | GGGTTTTGTTCGGGATATTG+GGG | + | tig0023095:54428-54447 | Msa1404940:intron | 45.0% |
| GCTCACATTACTTATGCGCA+TGG | + | tig0023095:54805-54824 | Msa1404940:intron | 45.0% | |
| ! | TAACGAGTTTGGGTTAGAGG+AGG | + | tig0023095:55166-55185 | Msa1404940:intron | 45.0% |
| CAGTTGCTCTATGTGTCAGT+TGG | + | tig0023095:55390-55409 | Msa1404940:intron | 45.0% | |
| AATCGGGAGATAGAATCCGA+TGG | + | tig0023095:55437-55456 | Msa1404940:intron | 45.0% | |
| GACTTTGCTCAAAGGTCTCT+CGG | - | tig0023095:55527-55546 | None:intergenic | 45.0% | |
| AGACCTTTGAGCAAAGTCGA+AGG | + | tig0023095:55529-55548 | Msa1404940:intron | 45.0% | |
| GACCTTTGAGCAAAGTCGAA+GGG | + | tig0023095:55530-55549 | Msa1404940:intron | 45.0% | |
| CATGTGTTCCAATGGTGCAT+TGG | + | tig0023095:55581-55600 | Msa1404940:intron | 45.0% | |
| TCCCAAAGTGTGAACTAGCT+AGG | - | tig0023095:55731-55750 | None:intergenic | 45.0% | |
| CAGCTGTATGGGATTTAGAC+TGG | + | tig0023095:56093-56112 | Msa1404940:intron | 45.0% | |
| ! | TGGGAGAGTAGTGGTTGTTT+TGG | + | tig0023095:56285-56304 | Msa1404940:intron | 45.0% |
| ACTGAAACAGCAGCCGAAAT+AGG | - | tig0023095:56354-56373 | None:intergenic | 45.0% | |
| CGTCTTAAGCTCCAATAAGC+GGG | + | tig0023095:56390-56409 | Msa1404940:intron | 45.0% | |
| GTCTTAAGCTCCAATAAGCG+GGG | + | tig0023095:56391-56410 | Msa1404940:intron | 45.0% | |
| ! | AGCTTTTGAGCGTACCACTT+AGG | + | tig0023095:57324-57343 | Msa1404940:intron | 45.0% |
| ACTATGGGACCCAAAGTCTA+TGG | + | tig0023095:57543-57562 | Msa1404940:intron | 45.0% | |
| CTATGGGACCCAAAGTCTAT+GGG | + | tig0023095:57544-57563 | Msa1404940:intron | 45.0% | |
| GATTCACTGCCCAACAACTA+AGG | - | tig0023095:57622-57641 | None:intergenic | 45.0% | |
| ATCCCCACATGTATCTCAAG+AGG | + | tig0023095:57781-57800 | Msa1404940:CDS | 45.0% | |
| !! | GTGTTGCTTGTCATCAATCC+CGG | + | tig0023095:57996-58015 | Msa1404940:CDS | 45.0% |
| AGATAAGCTAGTTGAGGTCG+AGG | + | tig0023095:58647-58666 | Msa1404940:intron | 45.0% | |
| CTCTGATAAAGCCTGCTTGT+GGG | + | tig0023095:58886-58905 | Msa1404940:CDS | 45.0% | |
| TCTGATAAAGCCTGCTTGTG+GGG | + | tig0023095:58887-58906 | Msa1404940:CDS | 45.0% | |
| TGTAAATAAGCCCCACAAGC+AGG | - | tig0023095:58900-58919 | None:intergenic | 45.0% | |
| TCCAGCAAGGTTTAGGTGTG+TGG | + | tig0023095:52006-52025 | Msa1404940:intron | 50.0% | |
| TCCACACACCTAAACCTTGC+TGG | - | tig0023095:52010-52029 | None:intergenic | 50.0% | |
| !!! | GAAGGACGGTGAGTTTTGGA+CGG | - | tig0023095:54011-54030 | None:intergenic | 50.0% |
| GACATTGACCGAAGCAAGGA+CGG | - | tig0023095:54036-54055 | None:intergenic | 50.0% | |
| AGGGAGAATAGGTCGCAAAC+AGG | - | tig0023095:54583-54602 | None:intergenic | 50.0% | |
| GACCCTTCGACTTTGCTCAA+AGG | - | tig0023095:55535-55554 | None:intergenic | 50.0% | |
| TGGTGTCCCTGTCTGTGAAA+AGG | + | tig0023095:56029-56048 | Msa1404940:intron | 50.0% | |
| ! | CGCTGACCTTTTCACAGACA+GGG | - | tig0023095:56038-56057 | None:intergenic | 50.0% |
| CCTGTCTGTGAAAAGGTCAG+CGG | + | tig0023095:56036-56055 | Msa1404940:intron | 50.0% | |
| CTGTCTGTGAAAAGGTCAGC+GGG | + | tig0023095:56037-56056 | Msa1404940:intron | 50.0% | |
| GGTCTCAAATGGGAGAGTAG+TGG | + | tig0023095:56276-56295 | Msa1404940:intron | 50.0% | |
| TTTGATCAAGCCTCGTGGGT+TGG | + | tig0023095:57739-57758 | Msa1404940:CDS | 50.0% | |
| TAAGCTAGTTGAGGTCGAGG+AGG | + | tig0023095:58650-58669 | Msa1404940:intron | 50.0% | |
| TAGTTGAGGTCGAGGAGGAT+TGG | + | tig0023095:58655-58674 | Msa1404940:intron | 50.0% | |
| AGTTGAGGTCGAGGAGGATT+GGG | + | tig0023095:58656-58675 | Msa1404940:intron | 50.0% | |
| GGAGGATTGGGCAACCTTTA+TGG | + | tig0023095:58668-58687 | Msa1404940:intron | 50.0% | |
| ! | CAAGCAGGCTTTATCAGAGC+TGG | - | tig0023095:58885-58904 | None:intergenic | 50.0% |
| GCTCTGATAAAGCCTGCTTG+TGG | + | tig0023095:58885-58904 | Msa1404940:CDS | 50.0% | |
| AGCAATGGTAGCCATAGAGC+TGG | + | tig0023095:58997-59016 | Msa1404940:CDS | 50.0% | |
| !! | GTGCAAGAGGTGTCCACACA+AGG | - | tig0023095:52447-52466 | None:intergenic | 55.0% |
| CAGTCCCCCTTGTACTTCCA+AGG | + | tig0023095:53429-53448 | Msa1404940:intron | 55.0% | |
| ! | GGTGGAAGGACGGTGAGTTT+TGG | - | tig0023095:54015-54034 | None:intergenic | 55.0% |
| AAGCAAGGACGGTGGAAGGA+CGG | - | tig0023095:54025-54044 | None:intergenic | 55.0% | |
| TCCTTCCACCGTCCTTGCTT+CGG | + | tig0023095:54025-54044 | Msa1404940:intron | 55.0% | |
| ATTGACCGAAGCAAGGACGG+TGG | - | tig0023095:54033-54052 | None:intergenic | 55.0% | |
| GAGTGACCGAAGCAAGGAAG+TGG | - | tig0023095:54091-54110 | None:intergenic | 55.0% | |
| GTGAGTGAGTGACCGAAGCA+AGG | - | tig0023095:54097-54116 | None:intergenic | 55.0% | |
| ! | CGAGTTTGGGTTAGAGGAGG+TGG | + | tig0023095:55169-55188 | Msa1404940:intron | 55.0% |
| ! | CCGCTGACCTTTTCACAGAC+AGG | - | tig0023095:56039-56058 | None:intergenic | 55.0% |
| GCAACGGCCTGAAGCAACTA+AGG | - | tig0023095:56225-56244 | None:intergenic | 55.0% | |
| ACCGAAGCAAGGACGGTGGA+AGG | - | tig0023095:54029-54048 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0023095 | gene | 51929 | 59027 | 51929 | ID=Msa1404940;Name=Msa1404940 |
| tig0023095 | mRNA | 51929 | 59027 | 51929 | ID=Msa1404940-mRNA-1;Parent=Msa1404940;Name=Msa1404940-mRNA-1;_AED=0.64;_eAED=0.64;_QI=0|0|0|0.5|1|1|6|0|246 |
| tig0023095 | exon | 51929 | 52020 | 51929 | ID=Msa1404940-mRNA-1:exon:23860;Parent=Msa1404940-mRNA-1 |
| tig0023095 | exon | 57724 | 57885 | 57724 | ID=Msa1404940-mRNA-1:exon:23861;Parent=Msa1404940-mRNA-1 |
| tig0023095 | exon | 57983 | 58096 | 57983 | ID=Msa1404940-mRNA-1:exon:23862;Parent=Msa1404940-mRNA-1 |
| tig0023095 | exon | 58184 | 58259 | 58184 | ID=Msa1404940-mRNA-1:exon:23863;Parent=Msa1404940-mRNA-1 |
| tig0023095 | exon | 58360 | 58455 | 58360 | ID=Msa1404940-mRNA-1:exon:23864;Parent=Msa1404940-mRNA-1 |
| tig0023095 | exon | 58827 | 59027 | 58827 | ID=Msa1404940-mRNA-1:exon:23865;Parent=Msa1404940-mRNA-1 |
| tig0023095 | CDS | 51929 | 52020 | 51929 | ID=Msa1404940-mRNA-1:cds;Parent=Msa1404940-mRNA-1 |
| tig0023095 | CDS | 57724 | 57885 | 57724 | ID=Msa1404940-mRNA-1:cds;Parent=Msa1404940-mRNA-1 |
| tig0023095 | CDS | 57983 | 58096 | 57983 | ID=Msa1404940-mRNA-1:cds;Parent=Msa1404940-mRNA-1 |
| tig0023095 | CDS | 58184 | 58259 | 58184 | ID=Msa1404940-mRNA-1:cds;Parent=Msa1404940-mRNA-1 |
| tig0023095 | CDS | 58360 | 58455 | 58360 | ID=Msa1404940-mRNA-1:cds;Parent=Msa1404940-mRNA-1 |
| tig0023095 | CDS | 58827 | 59027 | 58827 | ID=Msa1404940-mRNA-1:cds;Parent=Msa1404940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
