Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0649220 | XP_003607563.1 | 100.000 | 77 | 0 | 0 | 1 | 77 | 1 | 77 | 2.25e-44 | 147 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0649220 | sp|O82275|TAX1_ARATH | 76.712 | 73 | 17 | 0 | 5 | 77 | 3 | 75 | 4.73e-28 | 99.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0649220 | G7JV20 | 100.000 | 77 | 0 | 0 | 1 | 77 | 1 | 77 | 1.07e-44 | 147 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0649220 | 0.804517 | 2.079891e-49 | -8.615850e-47 |
| Msa0001830 | Msa0649220 | 0.816628 | 5.013608e-52 | -8.615850e-47 |
| Msa0007440 | Msa0649220 | 0.811963 | 5.380836e-51 | -8.615850e-47 |
| Msa0010490 | Msa0649220 | 0.834324 | 3.200723e-56 | -8.615850e-47 |
| Msa0010500 | Msa0649220 | 0.828292 | 9.750781e-55 | -8.615850e-47 |
| Msa0020390 | Msa0649220 | 0.841175 | 5.573337e-58 | -8.615850e-47 |
| Msa0020410 | Msa0649220 | 0.815381 | 9.516432e-52 | -8.615850e-47 |
| Msa0023480 | Msa0649220 | 0.800468 | 1.420882e-48 | -8.615850e-47 |
| Msa0032470 | Msa0649220 | 0.801376 | 9.273065e-49 | -8.615850e-47 |
| Msa0032590 | Msa0649220 | 0.816276 | 6.010336e-52 | -8.615850e-47 |
| Msa0033110 | Msa0649220 | 0.842505 | 2.482888e-58 | -8.615850e-47 |
| Msa0033260 | Msa0649220 | 0.839806 | 1.271231e-57 | -8.615850e-47 |
| Msa0036540 | Msa0649220 | 0.818557 | 1.841641e-52 | -8.615850e-47 |
| Msa0043980 | Msa0649220 | 0.801564 | 8.485127e-49 | -8.615850e-47 |
| Msa0044000 | Msa0649220 | 0.847970 | 8.256502e-60 | -8.615850e-47 |
| Msa0059950 | Msa0649220 | 0.805974 | 1.030011e-49 | -8.615850e-47 |
| Msa0071250 | Msa0649220 | 0.812430 | 4.256217e-51 | -8.615850e-47 |
| Msa0072420 | Msa0649220 | 0.817215 | 3.701957e-52 | -8.615850e-47 |
| Msa0075500 | Msa0649220 | 0.812159 | 4.876932e-51 | -8.615850e-47 |
| Msa0079070 | Msa0649220 | 0.817844 | 2.671073e-52 | -8.615850e-47 |
| Msa0090520 | Msa0649220 | 0.816510 | 5.327437e-52 | -8.615850e-47 |
| Msa0090550 | Msa0649220 | 0.816596 | 5.097623e-52 | -8.615850e-47 |
| Msa0090570 | Msa0649220 | 0.872045 | 4.298225e-67 | -8.615850e-47 |
| Msa0091410 | Msa0649220 | 0.833777 | 4.389772e-56 | -8.615850e-47 |
| Msa0095770 | Msa0649220 | 0.801737 | 7.819206e-49 | -8.615850e-47 |
| Msa0104230 | Msa0649220 | 0.804113 | 2.524054e-49 | -8.615850e-47 |
| Msa0104240 | Msa0649220 | 0.801951 | 7.065549e-49 | -8.615850e-47 |
| Msa0106710 | Msa0649220 | 0.803899 | 2.797335e-49 | -8.615850e-47 |
| Msa0115190 | Msa0649220 | 0.815589 | 8.555264e-52 | -8.615850e-47 |
| Msa0116380 | Msa0649220 | 0.800273 | 1.557214e-48 | -8.615850e-47 |
| Msa0118540 | Msa0649220 | 0.830904 | 2.257750e-55 | -8.615850e-47 |
| Msa0604290 | Msa0649220 | 0.823767 | 1.160006e-53 | -8.615850e-47 |
| Msa0610130 | Msa0649220 | 0.806246 | 9.029458e-50 | -8.615850e-47 |
| Msa0613340 | Msa0649220 | 0.800498 | 1.401397e-48 | -8.615850e-47 |
| Msa0618470 | Msa0649220 | 0.801126 | 1.042984e-48 | -8.615850e-47 |
| Msa0629240 | Msa0649220 | 0.807386 | 5.185742e-50 | -8.615850e-47 |
| Msa0631320 | Msa0649220 | 0.803490 | 3.400483e-49 | -8.615850e-47 |
| Msa0631350 | Msa0649220 | 0.807687 | 4.475388e-50 | -8.615850e-47 |
| Msa0642970 | Msa0649220 | 0.811408 | 7.107778e-51 | -8.615850e-47 |
| Msa0643350 | Msa0649220 | 0.811524 | 6.705258e-51 | -8.615850e-47 |
| Msa0649220 | Msa0657870 | 0.806696 | 7.254840e-50 | -8.615850e-47 |
| Msa0649220 | Msa0672550 | 0.814073 | 1.855056e-51 | -8.615850e-47 |
| Msa0649220 | Msa0679360 | 0.806468 | 8.105424e-50 | -8.615850e-47 |
| Msa0649220 | Msa0682680 | 0.849295 | 3.544397e-60 | -8.615850e-47 |
| Msa0649220 | Msa0683170 | 0.808583 | 2.883663e-50 | -8.615850e-47 |
| Msa0649220 | Msa0683600 | 0.801775 | 7.678132e-49 | -8.615850e-47 |
| Msa0649220 | Msa0689320 | 0.813661 | 2.286134e-51 | -8.615850e-47 |
| Msa0649220 | Msa0698540 | 0.817137 | 3.853880e-52 | -8.615850e-47 |
| Msa0649220 | Msa0701100 | 0.804701 | 1.903856e-49 | -8.615850e-47 |
| Msa0649220 | Msa0705990 | 0.802502 | 5.443257e-49 | -8.615850e-47 |
| Msa0649220 | Msa0707250 | 0.825505 | 4.518356e-54 | -8.615850e-47 |
| Msa0649220 | Msa0709120 | 0.827867 | 1.233971e-54 | -8.615850e-47 |
| Msa0649220 | Msa0711150 | 0.813976 | 1.948727e-51 | -8.615850e-47 |
| Msa0649220 | Msa0719180 | 0.806676 | 7.326089e-50 | -8.615850e-47 |
| Msa0649220 | Msa0737600 | 0.825780 | 3.888314e-54 | -8.615850e-47 |
| Msa0649220 | Msa0741440 | 0.839236 | 1.788252e-57 | -8.615850e-47 |
| Msa0649220 | Msa0746170 | 0.820431 | 6.883459e-53 | -8.615850e-47 |
| Msa0649220 | Msa0746210 | 0.821610 | 3.685086e-53 | -8.615850e-47 |
| Msa0649220 | Msa0750850 | 0.814446 | 1.534289e-51 | -8.615850e-47 |
| Msa0649220 | Msa0784480 | 0.804852 | 1.770535e-49 | -8.615850e-47 |
| Msa0649220 | Msa0800370 | 0.839834 | 1.249752e-57 | -8.615850e-47 |
| Msa0649220 | Msa0817460 | 0.809972 | 1.452694e-50 | -8.615850e-47 |
| Msa0649220 | Msa0822310 | -0.821314 | 4.312143e-53 | -8.615850e-47 |
| Msa0649220 | Msa0822500 | 0.851074 | 1.124534e-60 | -8.615850e-47 |
| Msa0649220 | Msa0826150 | 0.816279 | 6.000571e-52 | -8.615850e-47 |
| Msa0649220 | Msa0832340 | 0.800763 | 1.237265e-48 | -8.615850e-47 |
| Msa0649220 | Msa0833190 | -0.804619 | 1.980755e-49 | -8.615850e-47 |
| Msa0649220 | Msa0844110 | 0.803260 | 3.794670e-49 | -8.615850e-47 |
| Msa0649220 | Msa0844490 | 0.802438 | 5.611297e-49 | -8.615850e-47 |
| Msa0649220 | Msa0849030 | 0.825064 | 5.747777e-54 | -8.615850e-47 |
| Msa0649220 | Msa0861470 | 0.808282 | 3.344398e-50 | -8.615850e-47 |
| Msa0649220 | Msa0861570 | 0.806717 | 7.184384e-50 | -8.615850e-47 |
| Msa0649220 | Msa0865030 | 0.833296 | 5.786201e-56 | -8.615850e-47 |
| Msa0649220 | Msa0880810 | 0.824688 | 7.047239e-54 | -8.615850e-47 |
| Msa0649220 | Msa0888260 | 0.818464 | 1.933822e-52 | -8.615850e-47 |
| Msa0649220 | Msa0890550 | 0.833328 | 5.679043e-56 | -8.615850e-47 |
| Msa0649220 | Msa0894710 | 0.813560 | 2.406617e-51 | -8.615850e-47 |
| Msa0649220 | Msa0902830 | 0.802099 | 6.587022e-49 | -8.615850e-47 |
| Msa0649220 | Msa0918390 | 0.813151 | 2.959679e-51 | -8.615850e-47 |
| Msa0649220 | Msa0921420 | 0.816294 | 5.956021e-52 | -8.615850e-47 |
| Msa0649220 | Msa0923780 | 0.809724 | 1.642212e-50 | -8.615850e-47 |
| Msa0649220 | Msa0933380 | 0.818909 | 1.532102e-52 | -8.615850e-47 |
| Msa0649220 | Msa0944200 | 0.825232 | 5.245178e-54 | -8.615850e-47 |
| Msa0649220 | Msa0944610 | 0.817987 | 2.479738e-52 | -8.615850e-47 |
| Msa0649220 | Msa0960390 | 0.818118 | 2.315394e-52 | -8.615850e-47 |
| Msa0649220 | Msa0969810 | 0.808373 | 3.197957e-50 | -8.615850e-47 |
| Msa0649220 | Msa0974950 | 0.852295 | 5.068736e-61 | -8.615850e-47 |
| Msa0649220 | Msa0980540 | 0.809220 | 2.107232e-50 | -8.615850e-47 |
| Msa0649220 | Msa0980880 | 0.828885 | 7.011207e-55 | -8.615850e-47 |
| Msa0649220 | Msa0987370 | 0.811627 | 6.369641e-51 | -8.615850e-47 |
| Msa0649220 | Msa0994370 | 0.840313 | 9.373275e-58 | -8.615850e-47 |
| Msa0649220 | Msa1001390 | 0.802467 | 5.533468e-49 | -8.615850e-47 |
| Msa0649220 | Msa1025080 | 0.800010 | 1.761603e-48 | -8.615850e-47 |
| Msa0649220 | Msa1029050 | 0.857404 | 1.670441e-62 | -8.615850e-47 |
| Msa0649220 | Msa1037420 | 0.819948 | 8.884344e-53 | -8.615850e-47 |
| Msa0649220 | Msa1037520 | 0.817499 | 3.194901e-52 | -8.615850e-47 |
| Msa0649220 | Msa1041850 | 0.800095 | 1.692185e-48 | -8.615850e-47 |
| Msa0649220 | Msa1042660 | 0.813396 | 2.614794e-51 | -8.615850e-47 |
| Msa0649220 | Msa1048160 | 0.837714 | 4.417220e-57 | -8.615850e-47 |
| Msa0649220 | Msa1048220 | 0.824389 | 8.287804e-54 | -8.615850e-47 |
| Msa0649220 | Msa1059470 | 0.852109 | 5.726495e-61 | -8.615850e-47 |
| Msa0649220 | Msa1064250 | 0.818732 | 1.681341e-52 | -8.615850e-47 |
| Msa0649220 | Msa1071320 | 0.810364 | 1.195980e-50 | -8.615850e-47 |
| Msa0649220 | Msa1072900 | 0.811886 | 5.594615e-51 | -8.615850e-47 |
| Msa0649220 | Msa1081790 | -0.814199 | 1.739707e-51 | -8.615850e-47 |
| Msa0649220 | Msa1081930 | 0.811530 | 6.685269e-51 | -8.615850e-47 |
| Msa0649220 | Msa1089320 | 0.816949 | 4.247973e-52 | -8.615850e-47 |
| Msa0649220 | Msa1089450 | 0.844863 | 5.809432e-59 | -8.615850e-47 |
| Msa0649220 | Msa1089460 | 0.849725 | 2.688840e-60 | -8.615850e-47 |
| Msa0649220 | Msa1091100 | 0.807931 | 3.971527e-50 | -8.615850e-47 |
| Msa0649220 | Msa1093100 | 0.801506 | 8.718450e-49 | -8.615850e-47 |
| Msa0649220 | Msa1096070 | 0.852293 | 5.077134e-61 | -8.615850e-47 |
| Msa0649220 | Msa1100050 | 0.804152 | 2.477894e-49 | -8.615850e-47 |
| Msa0649220 | Msa1104560 | 0.817262 | 3.612242e-52 | -8.615850e-47 |
| Msa0649220 | Msa1109090 | 0.807898 | 4.037172e-50 | -8.615850e-47 |
| Msa0649220 | Msa1109680 | 0.818711 | 1.699956e-52 | -8.615850e-47 |
| Msa0649220 | Msa1111870 | 0.826958 | 2.038324e-54 | -8.615850e-47 |
| Msa0649220 | Msa1126830 | 0.809399 | 1.929221e-50 | -8.615850e-47 |
| Msa0649220 | Msa1128270 | 0.806310 | 8.753745e-50 | -8.615850e-47 |
| Msa0649220 | Msa1128280 | 0.804139 | 2.492936e-49 | -8.615850e-47 |
| Msa0649220 | Msa1133230 | 0.819408 | 1.179732e-52 | -8.615850e-47 |
| Msa0649220 | Msa1135470 | 0.825596 | 4.300254e-54 | -8.615850e-47 |
| Msa0649220 | Msa1142670 | 0.806274 | 8.905830e-50 | -8.615850e-47 |
| Msa0649220 | Msa1144040 | 0.809237 | 2.089571e-50 | -8.615850e-47 |
| Msa0649220 | Msa1152920 | 0.812739 | 3.643684e-51 | -8.615850e-47 |
| Msa0649220 | Msa1158640 | -0.822002 | 2.990170e-53 | -8.615850e-47 |
| Msa0649220 | Msa1160590 | 0.802766 | 4.800935e-49 | -8.615850e-47 |
| Msa0649220 | Msa1162780 | 0.818666 | 1.740057e-52 | -8.615850e-47 |
| Msa0649220 | Msa1163730 | 0.811859 | 5.671228e-51 | -8.615850e-47 |
| Msa0649220 | Msa1165780 | 0.814212 | 1.728014e-51 | -8.615850e-47 |
| Msa0649220 | Msa1166090 | -0.815459 | 9.145204e-52 | -8.615850e-47 |
| Msa0649220 | Msa1168580 | 0.822143 | 2.773126e-53 | -8.615850e-47 |
| Msa0649220 | Msa1173300 | 0.808462 | 3.060292e-50 | -8.615850e-47 |
| Msa0649220 | Msa1175200 | 0.825460 | 4.630861e-54 | -8.615850e-47 |
| Msa0649220 | Msa1176720 | 0.815557 | 8.696259e-52 | -8.615850e-47 |
| Msa0649220 | Msa1180500 | 0.806267 | 8.938036e-50 | -8.615850e-47 |
| Msa0649220 | Msa1181250 | 0.829164 | 5.997891e-55 | -8.615850e-47 |
| Msa0649220 | Msa1181330 | 0.818154 | 2.273160e-52 | -8.615850e-47 |
| Msa0649220 | Msa1181910 | 0.803858 | 2.851952e-49 | -8.615850e-47 |
| Msa0649220 | Msa1206270 | 0.830917 | 2.241701e-55 | -8.615850e-47 |
| Msa0649220 | Msa1206290 | 0.810356 | 1.200462e-50 | -8.615850e-47 |
| Msa0649220 | Msa1207310 | 0.816139 | 6.451690e-52 | -8.615850e-47 |
| Msa0649220 | Msa1210020 | 0.834515 | 2.866423e-56 | -8.615850e-47 |
| Msa0649220 | Msa1211230 | -0.807967 | 3.902105e-50 | -8.615850e-47 |
| Msa0649220 | Msa1211420 | -0.823615 | 1.259215e-53 | -8.615850e-47 |
| Msa0649220 | Msa1218580 | 0.823253 | 1.529692e-53 | -8.615850e-47 |
| Msa0649220 | Msa1221330 | 0.804484 | 2.113073e-49 | -8.615850e-47 |
| Msa0649220 | Msa1231840 | 0.847663 | 1.002875e-59 | -8.615850e-47 |
| Msa0649220 | Msa1232740 | 0.800757 | 1.240768e-48 | -8.615850e-47 |
| Msa0649220 | Msa1253800 | 0.800406 | 1.462909e-48 | -8.615850e-47 |
| Msa0649220 | Msa1254730 | 0.859091 | 5.255837e-63 | -8.615850e-47 |
| Msa0649220 | Msa1256810 | 0.807472 | 4.971603e-50 | -8.615850e-47 |
| Msa0649220 | Msa1259060 | 0.803216 | 3.875477e-49 | -8.615850e-47 |
| Msa0649220 | Msa1262720 | 0.806352 | 8.575109e-50 | -8.615850e-47 |
| Msa0649220 | Msa1271130 | 0.826996 | 1.995996e-54 | -8.615850e-47 |
| Msa0649220 | Msa1274560 | 0.820222 | 7.686595e-53 | -8.615850e-47 |
| Msa0649220 | Msa1277690 | 0.801446 | 8.968792e-49 | -8.615850e-47 |
| Msa0649220 | Msa1286800 | 0.803570 | 3.273870e-49 | -8.615850e-47 |
| Msa0649220 | Msa1294820 | 0.848771 | 4.957561e-60 | -8.615850e-47 |
| Msa0649220 | Msa1296830 | 0.823925 | 1.065255e-53 | -8.615850e-47 |
| Msa0649220 | Msa1298510 | 0.830270 | 3.227518e-55 | -8.615850e-47 |
| Msa0649220 | Msa1305810 | 0.825773 | 3.904448e-54 | -8.615850e-47 |
| Msa0649220 | Msa1306560 | 0.817136 | 3.856401e-52 | -8.615850e-47 |
| Msa0649220 | Msa1307180 | 0.837560 | 4.836391e-57 | -8.615850e-47 |
| Msa0649220 | Msa1307600 | 0.803767 | 2.978432e-49 | -8.615850e-47 |
| Msa0649220 | Msa1312520 | 0.811072 | 8.403936e-51 | -8.615850e-47 |
| Msa0649220 | Msa1313320 | 0.802903 | 4.498810e-49 | -8.615850e-47 |
| Msa0649220 | Msa1316360 | 0.849717 | 2.702236e-60 | -8.615850e-47 |
| Msa0649220 | Msa1316640 | 0.808380 | 3.186984e-50 | -8.615850e-47 |
| Msa0649220 | Msa1323690 | 0.800939 | 1.139245e-48 | -8.615850e-47 |
| Msa0649220 | Msa1331050 | -0.808896 | 2.472244e-50 | -8.615850e-47 |
| Msa0649220 | Msa1336560 | 0.840769 | 7.122154e-58 | -8.615850e-47 |
| Msa0649220 | Msa1341060 | 0.827183 | 1.800644e-54 | -8.615850e-47 |
| Msa0649220 | Msa1345100 | 0.801830 | 7.481268e-49 | -8.615850e-47 |
| Msa0649220 | Msa1345940 | 0.814137 | 1.795565e-51 | -8.615850e-47 |
| Msa0649220 | Msa1346840 | 0.830191 | 3.375319e-55 | -8.615850e-47 |
| Msa0649220 | Msa1351540 | 0.808606 | 2.851908e-50 | -8.615850e-47 |
| Msa0649220 | Msa1352890 | 0.803823 | 2.900605e-49 | -8.615850e-47 |
| Msa0649220 | Msa1355890 | 0.842629 | 2.300497e-58 | -8.615850e-47 |
| Msa0649220 | Msa1359270 | 0.806573 | 7.701907e-50 | -8.615850e-47 |
| Msa0649220 | Msa1364210 | 0.817954 | 2.522707e-52 | -8.615850e-47 |
| Msa0649220 | Msa1365800 | 0.809845 | 1.547032e-50 | -8.615850e-47 |
| Msa0649220 | Msa1368530 | 0.815962 | 7.064386e-52 | -8.615850e-47 |
| Msa0649220 | Msa1370070 | -0.805774 | 1.134667e-49 | -8.615850e-47 |
| Msa0649220 | Msa1370590 | 0.811165 | 8.023387e-51 | -8.615850e-47 |
| Msa0649220 | Msa1384100 | 0.813613 | 2.342419e-51 | -8.615850e-47 |
| Msa0649220 | Msa1393570 | 0.800812 | 1.209320e-48 | -8.615850e-47 |
| Msa0649220 | Msa1395730 | 0.818168 | 2.256651e-52 | -8.615850e-47 |
| Msa0649220 | Msa1396400 | -0.815237 | 1.024768e-51 | -8.615850e-47 |
| Msa0649220 | Msa1397120 | 0.800374 | 1.484840e-48 | -8.615850e-47 |
| Msa0649220 | Msa1400580 | 0.812161 | 4.874023e-51 | -8.615850e-47 |
| Msa0649220 | Msa1407190 | 0.834035 | 3.782244e-56 | -8.615850e-47 |
| Msa0649220 | Msa1412130 | 0.800935 | 1.141075e-48 | -8.615850e-47 |
| Msa0649220 | Msa1419870 | 0.814888 | 1.224792e-51 | -8.615850e-47 |
| Msa0649220 | Msa1420990 | 0.800804 | 1.213635e-48 | -8.615850e-47 |
| Msa0649220 | Msa1422810 | 0.817513 | 3.171908e-52 | -8.615850e-47 |
| Msa0649220 | Msa1425260 | 0.804149 | 2.481632e-49 | -8.615850e-47 |
| Msa0649220 | Msa1428780 | 0.822493 | 2.300621e-53 | -8.615850e-47 |
| Msa0649220 | Msa1432130 | 0.823163 | 1.605587e-53 | -8.615850e-47 |
| Msa0649220 | Msa1436600 | 0.817456 | 3.266433e-52 | -8.615850e-47 |
| Msa0649220 | Msa1437730 | 0.823274 | 1.513054e-53 | -8.615850e-47 |
| Msa0649220 | Msa1444120 | 0.812694 | 3.726506e-51 | -8.615850e-47 |
| Msa0649220 | Msa1449340 | -0.800912 | 1.153548e-48 | -8.615850e-47 |
| Msa0649220 | Msa1451160 | 0.803668 | 3.123733e-49 | -8.615850e-47 |
| Msa0649220 | Msa1454450 | 0.822759 | 1.994604e-53 | -8.615850e-47 |
| Msa0649220 | Msa1454570 | 0.854025 | 1.619566e-61 | -8.615850e-47 |
| Msa0649220 | Msa1454680 | 0.800270 | 1.559520e-48 | -8.615850e-47 |
| Msa0649220 | Msa1460320 | -0.832253 | 1.050315e-55 | -8.615850e-47 |
| Msa0649220 | Msa1466540 | 0.800977 | 1.119071e-48 | -8.615850e-47 |
| Msa0127800 | Msa0649220 | 0.851226 | 1.018454e-60 | -8.615850e-47 |
| Msa0129190 | Msa0649220 | -0.813124 | 2.999618e-51 | -8.615850e-47 |
| Msa0137990 | Msa0649220 | 0.818114 | 2.320915e-52 | -8.615850e-47 |
| Msa0138020 | Msa0649220 | 0.809969 | 1.454809e-50 | -8.615850e-47 |
| Msa0139670 | Msa0649220 | 0.828635 | 8.056772e-55 | -8.615850e-47 |
| Msa0150230 | Msa0649220 | 0.817681 | 2.907070e-52 | -8.615850e-47 |
| Msa0160960 | Msa0649220 | 0.836102 | 1.139130e-56 | -8.615850e-47 |
| Msa0162130 | Msa0649220 | 0.810581 | 1.073585e-50 | -8.615850e-47 |
| Msa0167980 | Msa0649220 | 0.825073 | 5.719702e-54 | -8.615850e-47 |
| Msa0171540 | Msa0649220 | 0.808952 | 2.405213e-50 | -8.615850e-47 |
| Msa0183850 | Msa0649220 | 0.872843 | 2.328978e-67 | -8.615850e-47 |
| Msa0183870 | Msa0649220 | 0.813703 | 2.237623e-51 | -8.615850e-47 |
| Msa0183900 | Msa0649220 | 0.802911 | 4.480501e-49 | -8.615850e-47 |
| Msa0188350 | Msa0649220 | 0.813561 | 2.405526e-51 | -8.615850e-47 |
| Msa0189040 | Msa0649220 | 0.801072 | 1.069999e-48 | -8.615850e-47 |
| Msa0189520 | Msa0649220 | 0.825891 | 3.661193e-54 | -8.615850e-47 |
| Msa0202410 | Msa0649220 | 0.802315 | 5.948026e-49 | -8.615850e-47 |
| Msa0204960 | Msa0649220 | 0.852833 | 3.559992e-61 | -8.615850e-47 |
| Msa0207040 | Msa0649220 | -0.828322 | 9.588302e-55 | -8.615850e-47 |
| Msa0207670 | Msa0649220 | 0.828417 | 9.097781e-55 | -8.615850e-47 |
| Msa0209350 | Msa0649220 | 0.822687 | 2.073702e-53 | -8.615850e-47 |
| Msa0209500 | Msa0649220 | 0.838542 | 2.704093e-57 | -8.615850e-47 |
| Msa0211150 | Msa0649220 | 0.807973 | 3.889982e-50 | -8.615850e-47 |
| Msa0214550 | Msa0649220 | 0.806177 | 9.334180e-50 | -8.615850e-47 |
| Msa0217700 | Msa0649220 | 0.803324 | 3.680558e-49 | -8.615850e-47 |
| Msa0223340 | Msa0649220 | 0.810889 | 9.210626e-51 | -8.615850e-47 |
| Msa0229380 | Msa0649220 | 0.834751 | 2.500612e-56 | -8.615850e-47 |
| Msa0231790 | Msa0649220 | 0.801756 | 7.747329e-49 | -8.615850e-47 |
| Msa0232050 | Msa0649220 | 0.810725 | 9.994544e-51 | -8.615850e-47 |
| Msa0233370 | Msa0649220 | 0.829771 | 4.271253e-55 | -8.615850e-47 |
| Msa0234090 | Msa0649220 | 0.805355 | 1.389165e-49 | -8.615850e-47 |
| Msa0376910 | Msa0649220 | 0.802115 | 6.538847e-49 | -8.615850e-47 |
| Msa0379690 | Msa0649220 | 0.806719 | 7.174677e-50 | -8.615850e-47 |
| Msa0380100 | Msa0649220 | 0.815418 | 9.339562e-52 | -8.615850e-47 |
| Msa0382370 | Msa0649220 | 0.839952 | 1.164271e-57 | -8.615850e-47 |
| Msa0383800 | Msa0649220 | 0.817493 | 3.204256e-52 | -8.615850e-47 |
| Msa0385490 | Msa0649220 | 0.805468 | 1.315689e-49 | -8.615850e-47 |
| Msa0385500 | Msa0649220 | 0.847780 | 9.312872e-60 | -8.615850e-47 |
| Msa0388700 | Msa0649220 | 0.806937 | 6.455021e-50 | -8.615850e-47 |
| Msa0388730 | Msa0649220 | 0.817782 | 2.758398e-52 | -8.615850e-47 |
| Msa0389210 | Msa0649220 | 0.869417 | 3.146111e-66 | -8.615850e-47 |
| Msa0394120 | Msa0649220 | 0.802911 | 4.481140e-49 | -8.615850e-47 |
| Msa0394470 | Msa0649220 | 0.803656 | 3.140863e-49 | -8.615850e-47 |
| Msa0402790 | Msa0649220 | 0.814566 | 1.443314e-51 | -8.615850e-47 |
| Msa0403770 | Msa0649220 | 0.844164 | 8.958652e-59 | -8.615850e-47 |
| Msa0417330 | Msa0649220 | 0.801796 | 7.605134e-49 | -8.615850e-47 |
| Msa0423450 | Msa0649220 | -0.806849 | 6.737508e-50 | -8.615850e-47 |
| Msa0427580 | Msa0649220 | 0.809444 | 1.886945e-50 | -8.615850e-47 |
| Msa0432160 | Msa0649220 | 0.826316 | 2.900441e-54 | -8.615850e-47 |
| Msa0434180 | Msa0649220 | 0.824902 | 6.274364e-54 | -8.615850e-47 |
| Msa0450400 | Msa0649220 | -0.825251 | 5.189560e-54 | -8.615850e-47 |
| Msa0455760 | Msa0649220 | 0.800394 | 1.471165e-48 | -8.615850e-47 |
| Msa0467380 | Msa0649220 | 0.817619 | 3.002728e-52 | -8.615850e-47 |
| Msa0469620 | Msa0649220 | -0.839340 | 1.679684e-57 | -8.615850e-47 |
| Msa0476680 | Msa0649220 | 0.835454 | 1.662527e-56 | -8.615850e-47 |
| Msa0240900 | Msa0649220 | 0.836939 | 6.974883e-57 | -8.615850e-47 |
| Msa0241140 | Msa0649220 | 0.816001 | 6.925043e-52 | -8.615850e-47 |
| Msa0249580 | Msa0649220 | 0.809462 | 1.870290e-50 | -8.615850e-47 |
| Msa0257490 | Msa0649220 | 0.856737 | 2.627633e-62 | -8.615850e-47 |
| Msa0261550 | Msa0649220 | 0.819672 | 1.027286e-52 | -8.615850e-47 |
| Msa0265430 | Msa0649220 | 0.817314 | 3.517292e-52 | -8.615850e-47 |
| Msa0269470 | Msa0649220 | 0.801117 | 1.047647e-48 | -8.615850e-47 |
| Msa0271360 | Msa0649220 | 0.806948 | 6.418436e-50 | -8.615850e-47 |
| Msa0271770 | Msa0649220 | 0.818226 | 2.189489e-52 | -8.615850e-47 |
| Msa0275020 | Msa0649220 | 0.803651 | 3.148339e-49 | -8.615850e-47 |
| Msa0278580 | Msa0649220 | 0.850047 | 2.185578e-60 | -8.615850e-47 |
| Msa0281530 | Msa0649220 | 0.850554 | 1.575079e-60 | -8.615850e-47 |
| Msa0283420 | Msa0649220 | 0.803719 | 3.048776e-49 | -8.615850e-47 |
| Msa0295460 | Msa0649220 | -0.817728 | 2.837350e-52 | -8.615850e-47 |
| Msa0296790 | Msa0649220 | 0.827131 | 1.853431e-54 | -8.615850e-47 |
| Msa0296820 | Msa0649220 | 0.836975 | 6.826257e-57 | -8.615850e-47 |
| Msa0305410 | Msa0649220 | 0.815499 | 8.960643e-52 | -8.615850e-47 |
| Msa0309880 | Msa0649220 | 0.802062 | 6.705202e-49 | -8.615850e-47 |
| Msa0310860 | Msa0649220 | 0.800269 | 1.559981e-48 | -8.615850e-47 |
| Msa0315940 | Msa0649220 | 0.803201 | 3.902598e-49 | -8.615850e-47 |
| Msa0317940 | Msa0649220 | 0.801028 | 1.092173e-48 | -8.615850e-47 |
| Msa0317960 | Msa0649220 | 0.833276 | 5.851234e-56 | -8.615850e-47 |
| Msa0317970 | Msa0649220 | 0.856357 | 3.398384e-62 | -8.615850e-47 |
| Msa0320590 | Msa0649220 | 0.811801 | 5.838918e-51 | -8.615850e-47 |
| Msa0321690 | Msa0649220 | 0.812550 | 4.006802e-51 | -8.615850e-47 |
| Msa0322240 | Msa0649220 | 0.823797 | 1.141579e-53 | -8.615850e-47 |
| Msa0326480 | Msa0649220 | 0.827548 | 1.472059e-54 | -8.615850e-47 |
| Msa0340380 | Msa0649220 | 0.832122 | 1.131746e-55 | -8.615850e-47 |
| Msa0343850 | Msa0649220 | 0.854326 | 1.326308e-61 | -8.615850e-47 |
| Msa0347750 | Msa0649220 | 0.818169 | 2.255166e-52 | -8.615850e-47 |
| Msa0357900 | Msa0649220 | 0.848603 | 5.515789e-60 | -8.615850e-47 |
| Msa0358860 | Msa0649220 | 0.814356 | 1.606475e-51 | -8.615850e-47 |
| Msa0363790 | Msa0649220 | 0.820756 | 5.797734e-53 | -8.615850e-47 |
| Msa0482940 | Msa0649220 | 0.814461 | 1.522492e-51 | -8.615850e-47 |
| Msa0485240 | Msa0649220 | 0.800880 | 1.171155e-48 | -8.615850e-47 |
| Msa0485710 | Msa0649220 | 0.805878 | 1.079208e-49 | -8.615850e-47 |
| Msa0496450 | Msa0649220 | 0.805284 | 1.437930e-49 | -8.615850e-47 |
| Msa0497210 | Msa0649220 | 0.810949 | 8.937196e-51 | -8.615850e-47 |
| Msa0510840 | Msa0649220 | 0.816084 | 6.636636e-52 | -8.615850e-47 |
| Msa0510930 | Msa0649220 | 0.802286 | 6.029790e-49 | -8.615850e-47 |
| Msa0518170 | Msa0649220 | 0.828740 | 7.600025e-55 | -8.615850e-47 |
| Msa0521010 | Msa0649220 | 0.834538 | 2.829560e-56 | -8.615850e-47 |
| Msa0531530 | Msa0649220 | 0.806773 | 6.990616e-50 | -8.615850e-47 |
| Msa0532990 | Msa0649220 | 0.823467 | 1.363551e-53 | -8.615850e-47 |
| Msa0534870 | Msa0649220 | 0.814755 | 1.311099e-51 | -8.615850e-47 |
| Msa0542290 | Msa0649220 | 0.840319 | 9.340247e-58 | -8.615850e-47 |
| Msa0542560 | Msa0649220 | 0.823049 | 1.707269e-53 | -8.615850e-47 |
| Msa0544840 | Msa0649220 | 0.816570 | 5.166173e-52 | -8.615850e-47 |
| Msa0547160 | Msa0649220 | 0.836164 | 1.098721e-56 | -8.615850e-47 |
| Msa0555450 | Msa0649220 | 0.800882 | 1.169764e-48 | -8.615850e-47 |
| Msa0581110 | Msa0649220 | 0.811081 | 8.366938e-51 | -8.615850e-47 |
| Msa0587910 | Msa0649220 | 0.846929 | 1.595046e-59 | -8.615850e-47 |
| Msa0588260 | Msa0649220 | 0.853925 | 1.731161e-61 | -8.615850e-47 |
| Msa0600080 | Msa0649220 | 0.800067 | 1.714965e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0649220 | MtrunA17_Chr4g0040991 | 100.000 | 77 | 0 | 0 | 1 | 77 | 1 | 77 | 2.07e-48 | 147 |
| Msa0649220 | MtrunA17_Chr2g0325441 | 89.610 | 77 | 8 | 0 | 1 | 77 | 1 | 77 | 1.42e-45 | 140 |
| Msa0649220 | MtrunA17_Chr2g0283451 | 75.000 | 76 | 19 | 0 | 2 | 77 | 5 | 80 | 4.57e-35 | 114 |
| Msa0649220 | MtrunA17_Chr2g0324911 | 58.974 | 78 | 31 | 1 | 1 | 77 | 1 | 78 | 6.57e-21 | 78.2 |
| Msa0649220 | MtrunA17_Chr4g0040491 | 53.521 | 71 | 33 | 0 | 7 | 77 | 9 | 79 | 2.80e-14 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0649220 | AT2G31090.1 | 76.712 | 73 | 17 | 0 | 5 | 77 | 3 | 75 | 4.80e-29 | 99.0 |
| Msa0649220 | AT2G20562.1 | 52.778 | 72 | 34 | 0 | 6 | 77 | 2 | 73 | 2.97e-21 | 79.3 |
Find 17 sgRNAs with CRISPR-Local
Find 30 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATCGTTGGTGTACTCATC+TGG | 0.378938 | 4_3:-55805920 | Msa0649220:CDS |
| CTCTCAGCAGGGGATCTTAG+AGG | 0.383799 | 4_3:+55805679 | None:intergenic |
| GGTGTACTCATCTGGATTGT+CGG | 0.396564 | 4_3:-55805912 | Msa0649220:CDS |
| GAAGGTGAATGCAGACCATT+GGG | 0.445910 | 4_3:-55805987 | Msa0649220:CDS |
| TGTGGAACTTGCGCTTGAAT+TGG | 0.449919 | 4_3:-55805735 | Msa0649220:CDS |
| AGAAGGTGAATGCAGACCAT+TGG | 0.487199 | 4_3:-55805988 | Msa0649220:CDS |
| GTGTACTCATCTGGATTGTC+GGG | 0.488369 | 4_3:-55805911 | Msa0649220:intron |
| TTTATGCTTAACTATAATTG+TGG | 0.504363 | 4_3:-55805753 | Msa0649220:CDS |
| TGTCTTCTCATCTCAATCGT+TGG | 0.507454 | 4_3:-55805933 | Msa0649220:CDS |
| CAAAGCTCCATTGCATGTCA+TGG | 0.535851 | 4_3:-55805711 | Msa0649220:CDS |
| AACCACTCCATGACATGCAA+TGG | 0.552057 | 4_3:+55805704 | None:intergenic |
| GAAAAGATGTGCAATTCAGA+AGG | 0.574414 | 4_3:-55806005 | Msa0649220:exon |
| AGAAGACAGAGAAAAGCGAA+AGG | 0.608508 | 4_3:+55805948 | None:intergenic |
| CTCCATTGCATGTCATGGAG+TGG | 0.615369 | 4_3:-55805706 | Msa0649220:CDS |
| ATAGTTAAGCATAAACAACA+AGG | 0.675018 | 4_3:+55805761 | None:intergenic |
| AGACCTAATAGAAAACCCAA+TGG | 0.675649 | 4_3:+55805972 | None:intergenic |
| TAGTTAAGCATAAACAACAA+GGG | 0.709299 | 4_3:+55805762 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTCATATTTTGCAGAT+TGG | - | chr4_3:55805821-55805840 | Msa0649220:intron | 20.0% |
| !! | TTTATGCTTAACTATAATTG+TGG | - | chr4_3:55805869-55805888 | Msa0649220:intron | 20.0% |
| ! | TGATTTCTTCATATTTGATC+TGG | - | chr4_3:55805766-55805785 | Msa0649220:CDS | 25.0% |
| ! | GATTTCTTCATATTTGATCT+GGG | - | chr4_3:55805767-55805786 | Msa0649220:CDS | 25.0% |
| ! | TAGTTAAGCATAAACAACAA+GGG | + | chr4_3:55805863-55805882 | None:intergenic | 25.0% |
| ! | ATAGTTAAGCATAAACAACA+AGG | + | chr4_3:55805864-55805883 | None:intergenic | 25.0% |
| ! | AAAAAAAAAGTCAAAGTCCA+AGG | + | chr4_3:55806031-55806050 | None:intergenic | 25.0% |
| GAAAAGATGTGCAATTCAGA+AGG | - | chr4_3:55805617-55805636 | Msa0649220:three_prime_UTR | 35.0% | |
| ! | AGACCATTGGGTTTTCTATT+AGG | - | chr4_3:55805647-55805666 | Msa0649220:three_prime_UTR | 35.0% |
| AGACCTAATAGAAAACCCAA+TGG | + | chr4_3:55805653-55805672 | None:intergenic | 35.0% | |
| AGAAGACAGAGAAAAGCGAA+AGG | + | chr4_3:55805677-55805696 | None:intergenic | 40.0% | |
| TGTCTTCTCATCTCAATCGT+TGG | - | chr4_3:55805689-55805708 | Msa0649220:CDS | 40.0% | |
| AATTACTCTTCCCACTCTTC+TGG | - | chr4_3:55805736-55805755 | Msa0649220:CDS | 40.0% | |
| ATTACTCTTCCCACTCTTCT+GGG | - | chr4_3:55805737-55805756 | Msa0649220:CDS | 40.0% | |
| TCAAAGTAACCCAGAAGAGT+GGG | + | chr4_3:55805749-55805768 | None:intergenic | 40.0% | |
| ATCAAAGTAACCCAGAAGAG+TGG | + | chr4_3:55805750-55805769 | None:intergenic | 40.0% | |
| AGAAGGTGAATGCAGACCAT+TGG | - | chr4_3:55805634-55805653 | Msa0649220:three_prime_UTR | 45.0% | |
| GAAGGTGAATGCAGACCATT+GGG | - | chr4_3:55805635-55805654 | Msa0649220:three_prime_UTR | 45.0% | |
| CAATCGTTGGTGTACTCATC+TGG | - | chr4_3:55805702-55805721 | Msa0649220:CDS | 45.0% | |
| GGTGTACTCATCTGGATTGT+CGG | - | chr4_3:55805710-55805729 | Msa0649220:CDS | 45.0% | |
| GTGTACTCATCTGGATTGTC+GGG | - | chr4_3:55805711-55805730 | Msa0649220:CDS | 45.0% | |
| TGTGGAACTTGCGCTTGAAT+TGG | - | chr4_3:55805887-55805906 | Msa0649220:intron | 45.0% | |
| CAAAGCTCCATTGCATGTCA+TGG | - | chr4_3:55805911-55805930 | Msa0649220:intron | 45.0% | |
| AACCACTCCATGACATGCAA+TGG | + | chr4_3:55805921-55805940 | None:intergenic | 45.0% | |
| CTCCATTGCATGTCATGGAG+TGG | - | chr4_3:55805916-55805935 | Msa0649220:CDS | 50.0% | |
| TCTCTCTCTCTCTCTCAGCA+GGG | + | chr4_3:55805957-55805976 | None:intergenic | 50.0% | |
| GAGAGAGAGAGAGAGTTCCT+TGG | - | chr4_3:55806011-55806030 | Msa0649220:exon | 50.0% | |
| CTCTCAGCAGGGGATCTTAG+AGG | + | chr4_3:55805946-55805965 | None:intergenic | 55.0% | |
| CTCTCTCTCTCTCTCAGCAG+GGG | + | chr4_3:55805956-55805975 | None:intergenic | 55.0% | |
| CTCTCTCTCTCTCTCTCAGC+AGG | + | chr4_3:55805958-55805977 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 55805589 | 55806055 | 55805589 | ID=Msa0649220;Name=Msa0649220 |
| chr4_3 | mRNA | 55805589 | 55806055 | 55805589 | ID=Msa0649220-mRNA-1;Parent=Msa0649220;Name=Msa0649220-mRNA-1;_AED=0.00;_eAED=0.00;_QI=34|1|1|1|1|1|2|93|77 |
| chr4_3 | exon | 55805589 | 55805805 | 55805589 | ID=Msa0649220-mRNA-1:exon:14391;Parent=Msa0649220-mRNA-1 |
| chr4_3 | exon | 55805912 | 55806055 | 55805912 | ID=Msa0649220-mRNA-1:exon:14390;Parent=Msa0649220-mRNA-1 |
| chr4_3 | five_prime_UTR | 55806022 | 55806055 | 55806022 | ID=Msa0649220-mRNA-1:five_prime_utr;Parent=Msa0649220-mRNA-1 |
| chr4_3 | CDS | 55805912 | 55806021 | 55805912 | ID=Msa0649220-mRNA-1:cds;Parent=Msa0649220-mRNA-1 |
| chr4_3 | CDS | 55805682 | 55805805 | 55805682 | ID=Msa0649220-mRNA-1:cds;Parent=Msa0649220-mRNA-1 |
| chr4_3 | three_prime_UTR | 55805589 | 55805681 | 55805589 | ID=Msa0649220-mRNA-1:three_prime_utr;Parent=Msa0649220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
