Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0050570 | XP_013468580.1 | 86.076 | 553 | 17 | 3 | 1 | 493 | 1 | 553 | 0.0 | 868 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0050570 | sp|P27456|GSHRP_PEA | 79.385 | 553 | 53 | 4 | 1 | 493 | 1 | 552 | 0.0 | 865 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0050570 | A0A072VL94 | 86.076 | 553 | 17 | 3 | 1 | 493 | 1 | 553 | 0.0 | 868 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006820 | Msa0050570 | 0.809216 | 2.111677e-50 | -8.615850e-47 |
| Msa0008850 | Msa0050570 | 0.814341 | 1.618525e-51 | -8.615850e-47 |
| Msa0011720 | Msa0050570 | 0.806877 | 6.646042e-50 | -8.615850e-47 |
| Msa0017120 | Msa0050570 | 0.823884 | 1.088926e-53 | -8.615850e-47 |
| Msa0030000 | Msa0050570 | 0.810018 | 1.419807e-50 | -8.615850e-47 |
| Msa0033590 | Msa0050570 | 0.902766 | 6.927568e-79 | -8.615850e-47 |
| Msa0047470 | Msa0050570 | 0.818544 | 1.854887e-52 | -8.615850e-47 |
| Msa0047940 | Msa0050570 | 0.807390 | 5.173867e-50 | -8.615850e-47 |
| Msa0050500 | Msa0050570 | 0.809560 | 1.781000e-50 | -8.615850e-47 |
| Msa0050570 | Msa0056040 | 0.814129 | 1.802504e-51 | -8.615850e-47 |
| Msa0050570 | Msa0057740 | 0.818695 | 1.714080e-52 | -8.615850e-47 |
| Msa0050570 | Msa0058020 | 0.806542 | 7.819472e-50 | -8.615850e-47 |
| Msa0050570 | Msa0060600 | 0.801586 | 8.398257e-49 | -8.615850e-47 |
| Msa0050570 | Msa0065390 | 0.829085 | 6.269500e-55 | -8.615850e-47 |
| Msa0050570 | Msa0079250 | 0.811720 | 6.077863e-51 | -8.615850e-47 |
| Msa0050570 | Msa0083160 | 0.800944 | 1.136269e-48 | -8.615850e-47 |
| Msa0050570 | Msa0084680 | 0.800391 | 1.473024e-48 | -8.615850e-47 |
| Msa0050570 | Msa0084800 | 0.855204 | 7.380153e-62 | -8.615850e-47 |
| Msa0050570 | Msa0087110 | 0.809332 | 1.993824e-50 | -8.615850e-47 |
| Msa0050570 | Msa0102410 | 0.812033 | 5.196202e-51 | -8.615850e-47 |
| Msa0050570 | Msa0103060 | 0.822574 | 2.202956e-53 | -8.615850e-47 |
| Msa0050570 | Msa0105340 | 0.810017 | 1.420924e-50 | -8.615850e-47 |
| Msa0050570 | Msa0110710 | 0.830018 | 3.719960e-55 | -8.615850e-47 |
| Msa0050570 | Msa0125230 | 0.813147 | 2.965891e-51 | -8.615850e-47 |
| Msa0050570 | Msa0130800 | 0.804276 | 2.334327e-49 | -8.615850e-47 |
| Msa0050570 | Msa0133670 | 0.802713 | 4.923115e-49 | -8.615850e-47 |
| Msa0050570 | Msa0133880 | 0.802582 | 5.239270e-49 | -8.615850e-47 |
| Msa0050570 | Msa0141670 | 0.809609 | 1.738471e-50 | -8.615850e-47 |
| Msa0050570 | Msa0157020 | 0.813931 | 1.993346e-51 | -8.615850e-47 |
| Msa0050570 | Msa0168900 | 0.807626 | 4.611924e-50 | -8.615850e-47 |
| Msa0050570 | Msa0185390 | 0.818625 | 1.777840e-52 | -8.615850e-47 |
| Msa0050570 | Msa0252180 | 0.800599 | 1.336085e-48 | -8.615850e-47 |
| Msa0050570 | Msa0277530 | 0.802377 | 5.773838e-49 | -8.615850e-47 |
| Msa0050570 | Msa0278620 | 0.820819 | 5.606612e-53 | -8.615850e-47 |
| Msa0050570 | Msa0284870 | 0.804801 | 1.814032e-49 | -8.615850e-47 |
| Msa0050570 | Msa0304870 | 0.804565 | 2.032353e-49 | -8.615850e-47 |
| Msa0050570 | Msa0306130 | 0.818994 | 1.465746e-52 | -8.615850e-47 |
| Msa0050570 | Msa0318000 | 0.820458 | 6.785952e-53 | -8.615850e-47 |
| Msa0050570 | Msa0330270 | 0.803746 | 3.009790e-49 | -8.615850e-47 |
| Msa0050570 | Msa0341260 | 0.803275 | 3.767194e-49 | -8.615850e-47 |
| Msa0050570 | Msa0369780 | 0.811934 | 5.461690e-51 | -8.615850e-47 |
| Msa0050570 | Msa0421800 | 0.824145 | 9.460901e-54 | -8.615850e-47 |
| Msa0050570 | Msa0423110 | 0.854159 | 1.482209e-61 | -8.615850e-47 |
| Msa0050570 | Msa0427050 | 0.812166 | 4.861047e-51 | -8.615850e-47 |
| Msa0050570 | Msa0463540 | 0.800719 | 1.263309e-48 | -8.615850e-47 |
| Msa0050570 | Msa0467800 | 0.817546 | 3.118115e-52 | -8.615850e-47 |
| Msa0050570 | Msa0467880 | 0.822497 | 2.295434e-53 | -8.615850e-47 |
| Msa0050570 | Msa0473450 | 0.831766 | 1.386176e-55 | -8.615850e-47 |
| Msa0050570 | Msa0486860 | 0.817132 | 3.864630e-52 | -8.615850e-47 |
| Msa0050570 | Msa0505660 | 0.804176 | 2.448922e-49 | -8.615850e-47 |
| Msa0050570 | Msa0509540 | 0.821458 | 3.994580e-53 | -8.615850e-47 |
| Msa0050570 | Msa0514260 | 0.822337 | 2.499959e-53 | -8.615850e-47 |
| Msa0050570 | Msa0514990 | 0.838538 | 2.710421e-57 | -8.615850e-47 |
| Msa0050570 | Msa0530210 | 0.809142 | 2.190055e-50 | -8.615850e-47 |
| Msa0050570 | Msa0534420 | 0.804502 | 2.094487e-49 | -8.615850e-47 |
| Msa0050570 | Msa0542040 | 0.814855 | 1.245691e-51 | -8.615850e-47 |
| Msa0050570 | Msa0547050 | 0.801650 | 8.147876e-49 | -8.615850e-47 |
| Msa0050570 | Msa0558890 | 0.818229 | 2.186304e-52 | -8.615850e-47 |
| Msa0050570 | Msa0560180 | 0.839349 | 1.671423e-57 | -8.615850e-47 |
| Msa0050570 | Msa0577230 | 0.807877 | 4.077226e-50 | -8.615850e-47 |
| Msa0050570 | Msa0598250 | 0.810560 | 1.084904e-50 | -8.615850e-47 |
| Msa0050570 | Msa0601780 | 0.811674 | 6.222069e-51 | -8.615850e-47 |
| Msa0050570 | Msa0605230 | 0.830349 | 3.088232e-55 | -8.615850e-47 |
| Msa0050570 | Msa0614230 | 0.810495 | 1.120385e-50 | -8.615850e-47 |
| Msa0050570 | Msa0619330 | 0.800551 | 1.366906e-48 | -8.615850e-47 |
| Msa0050570 | Msa0620750 | 0.816015 | 6.873939e-52 | -8.615850e-47 |
| Msa0050570 | Msa0622390 | 0.803477 | 3.421684e-49 | -8.615850e-47 |
| Msa0050570 | Msa0635990 | 0.806244 | 9.038085e-50 | -8.615850e-47 |
| Msa0050570 | Msa0638690 | 0.806979 | 6.321640e-50 | -8.615850e-47 |
| Msa0050570 | Msa0647220 | 0.802030 | 6.807602e-49 | -8.615850e-47 |
| Msa0050570 | Msa0654060 | 0.811543 | 6.641928e-51 | -8.615850e-47 |
| Msa0050570 | Msa0659040 | 0.814869 | 1.236853e-51 | -8.615850e-47 |
| Msa0050570 | Msa0662850 | 0.809339 | 1.986900e-50 | -8.615850e-47 |
| Msa0050570 | Msa0681890 | 0.828265 | 9.896084e-55 | -8.615850e-47 |
| Msa0050570 | Msa0686610 | 0.807455 | 5.014020e-50 | -8.615850e-47 |
| Msa0050570 | Msa0690720 | 0.819101 | 1.385859e-52 | -8.615850e-47 |
| Msa0050570 | Msa0704990 | 0.839203 | 1.823610e-57 | -8.615850e-47 |
| Msa0050570 | Msa0705030 | 0.840644 | 7.679246e-58 | -8.615850e-47 |
| Msa0050570 | Msa0706530 | 0.816991 | 4.156886e-52 | -8.615850e-47 |
| Msa0050570 | Msa0709480 | 0.803716 | 3.052349e-49 | -8.615850e-47 |
| Msa0050570 | Msa0724050 | 0.825860 | 3.723113e-54 | -8.615850e-47 |
| Msa0050570 | Msa0726610 | 0.834041 | 3.769042e-56 | -8.615850e-47 |
| Msa0050570 | Msa0736930 | 0.800775 | 1.230023e-48 | -8.615850e-47 |
| Msa0050570 | Msa0739570 | 0.819556 | 1.091451e-52 | -8.615850e-47 |
| Msa0050570 | Msa0750380 | 0.809176 | 2.153618e-50 | -8.615850e-47 |
| Msa0050570 | Msa0754860 | 0.800596 | 1.337911e-48 | -8.615850e-47 |
| Msa0050570 | Msa0763880 | 0.839045 | 2.003509e-57 | -8.615850e-47 |
| Msa0050570 | Msa0763910 | 0.850506 | 1.624749e-60 | -8.615850e-47 |
| Msa0050570 | Msa0771960 | 0.806950 | 6.411462e-50 | -8.615850e-47 |
| Msa0050570 | Msa0772150 | 0.814654 | 1.380134e-51 | -8.615850e-47 |
| Msa0050570 | Msa0782330 | 0.805024 | 1.629707e-49 | -8.615850e-47 |
| Msa0050570 | Msa0824770 | 0.814087 | 1.841655e-51 | -8.615850e-47 |
| Msa0050570 | Msa0830720 | 0.813477 | 2.509282e-51 | -8.615850e-47 |
| Msa0050570 | Msa0833940 | 0.802384 | 5.756598e-49 | -8.615850e-47 |
| Msa0050570 | Msa0844100 | 0.853045 | 3.096536e-61 | -8.615850e-47 |
| Msa0050570 | Msa0851740 | 0.801053 | 1.079635e-48 | -8.615850e-47 |
| Msa0050570 | Msa0860270 | 0.809674 | 1.683511e-50 | -8.615850e-47 |
| Msa0050570 | Msa0934830 | 0.815156 | 1.068111e-51 | -8.615850e-47 |
| Msa0050570 | Msa0952950 | 0.805173 | 1.516565e-49 | -8.615850e-47 |
| Msa0050570 | Msa0952990 | 0.801062 | 1.075116e-48 | -8.615850e-47 |
| Msa0050570 | Msa0958020 | 0.823852 | 1.108170e-53 | -8.615850e-47 |
| Msa0050570 | Msa0971860 | 0.838043 | 3.635703e-57 | -8.615850e-47 |
| Msa0050570 | Msa0978000 | 0.821892 | 3.171248e-53 | -8.615850e-47 |
| Msa0050570 | Msa0990520 | 0.816439 | 5.526952e-52 | -8.615850e-47 |
| Msa0050570 | Msa1024580 | 0.838832 | 2.274496e-57 | -8.615850e-47 |
| Msa0050570 | Msa1029320 | 0.811596 | 6.469524e-51 | -8.615850e-47 |
| Msa0050570 | Msa1030430 | 0.821556 | 3.791244e-53 | -8.615850e-47 |
| Msa0050570 | Msa1038320 | 0.821405 | 4.108348e-53 | -8.615850e-47 |
| Msa0050570 | Msa1044040 | 0.809042 | 2.301081e-50 | -8.615850e-47 |
| Msa0050570 | Msa1049440 | 0.838077 | 3.562634e-57 | -8.615850e-47 |
| Msa0050570 | Msa1079610 | 0.801225 | 9.956307e-49 | -8.615850e-47 |
| Msa0050570 | Msa1089530 | 0.817927 | 2.558540e-52 | -8.615850e-47 |
| Msa0050570 | Msa1102180 | 0.856592 | 2.898503e-62 | -8.615850e-47 |
| Msa0050570 | Msa1108530 | 0.814173 | 1.762610e-51 | -8.615850e-47 |
| Msa0050570 | Msa1115580 | 0.803882 | 2.820017e-49 | -8.615850e-47 |
| Msa0050570 | Msa1123340 | 0.857593 | 1.468286e-62 | -8.615850e-47 |
| Msa0050570 | Msa1152280 | 0.812859 | 3.430148e-51 | -8.615850e-47 |
| Msa0050570 | Msa1157160 | 0.801709 | 7.921063e-49 | -8.615850e-47 |
| Msa0050570 | Msa1166180 | 0.818862 | 1.570338e-52 | -8.615850e-47 |
| Msa0050570 | Msa1166280 | 0.813314 | 2.724639e-51 | -8.615850e-47 |
| Msa0050570 | Msa1198450 | 0.811500 | 6.788505e-51 | -8.615850e-47 |
| Msa0050570 | Msa1215210 | 0.853127 | 2.933860e-61 | -8.615850e-47 |
| Msa0050570 | Msa1220740 | 0.812789 | 3.551937e-51 | -8.615850e-47 |
| Msa0050570 | Msa1310260 | 0.806525 | 7.885534e-50 | -8.615850e-47 |
| Msa0050570 | Msa1322420 | 0.831136 | 1.980194e-55 | -8.615850e-47 |
| Msa0050570 | Msa1327820 | 0.810603 | 1.061952e-50 | -8.615850e-47 |
| Msa0050570 | Msa1334650 | 0.812268 | 4.617988e-51 | -8.615850e-47 |
| Msa0050570 | Msa1349360 | 0.807148 | 5.823010e-50 | -8.615850e-47 |
| Msa0050570 | Msa1372560 | 0.817616 | 3.006617e-52 | -8.615850e-47 |
| Msa0050570 | Msa1381130 | 0.823765 | 1.161071e-53 | -8.615850e-47 |
| Msa0050570 | Msa1388850 | 0.804563 | 2.033874e-49 | -8.615850e-47 |
| Msa0050570 | Msa1412080 | 0.818321 | 2.083037e-52 | -8.615850e-47 |
| Msa0050570 | Msa1422750 | 0.809468 | 1.864054e-50 | -8.615850e-47 |
| Msa0050570 | Msa1435470 | 0.839329 | 1.691674e-57 | -8.615850e-47 |
| Msa0050570 | Msa1440180 | 0.815550 | 8.728841e-52 | -8.615850e-47 |
| Msa0050570 | Msa1444450 | 0.804195 | 2.427472e-49 | -8.615850e-47 |
| Msa0050570 | Msa1449740 | 0.812953 | 3.270517e-51 | -8.615850e-47 |
| Msa0050570 | Msa1456810 | 0.802537 | 5.351834e-49 | -8.615850e-47 |
| Msa0050570 | Msa1458920 | 0.825811 | 3.824420e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0050570 | MtrunA17_Chr1g0184771 | 86.076 | 553 | 17 | 3 | 1 | 493 | 1 | 553 | 0.0 | 868 |
| Msa0050570 | MtrunA17_Chr6g0462411 | 46.751 | 477 | 187 | 9 | 66 | 476 | 16 | 491 | 4.85e-134 | 397 |
| Msa0050570 | MtrunA17_Chr2g0294661 | 29.648 | 398 | 223 | 14 | 58 | 410 | 68 | 453 | 9.43e-29 | 119 |
| Msa0050570 | MtrunA17_Chr4g0068201 | 30.318 | 409 | 227 | 15 | 48 | 410 | 54 | 450 | 8.06e-28 | 117 |
| Msa0050570 | MtrunA17_Chr4g0068951 | 27.143 | 350 | 224 | 11 | 135 | 461 | 115 | 456 | 3.98e-24 | 105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0050570 | AT3G54660.1 | 71.285 | 498 | 82 | 4 | 55 | 492 | 68 | 564 | 0.0 | 716 |
| Msa0050570 | AT3G24170.1 | 46.383 | 470 | 185 | 8 | 70 | 473 | 21 | 489 | 7.72e-132 | 391 |
| Msa0050570 | AT3G24170.2 | 46.383 | 470 | 185 | 8 | 70 | 473 | 21 | 489 | 7.72e-132 | 391 |
| Msa0050570 | AT3G24170.3 | 46.383 | 470 | 185 | 8 | 70 | 473 | 21 | 489 | 7.72e-132 | 391 |
| Msa0050570 | AT3G16950.1 | 29.701 | 468 | 254 | 17 | 3 | 410 | 2 | 454 | 7.66e-29 | 120 |
| Msa0050570 | AT3G16950.2 | 29.701 | 468 | 254 | 17 | 3 | 410 | 2 | 454 | 8.00e-29 | 120 |
| Msa0050570 | AT4G16155.1 | 30.897 | 301 | 180 | 9 | 128 | 410 | 161 | 451 | 1.88e-28 | 119 |
| Msa0050570 | AT1G48030.2 | 27.660 | 282 | 188 | 7 | 135 | 403 | 120 | 398 | 6.87e-24 | 105 |
| Msa0050570 | AT1G48030.5 | 27.660 | 282 | 188 | 7 | 135 | 403 | 120 | 398 | 6.87e-24 | 105 |
| Msa0050570 | AT1G48030.3 | 27.660 | 282 | 188 | 7 | 135 | 403 | 120 | 398 | 6.87e-24 | 105 |
| Msa0050570 | AT1G48030.1 | 27.660 | 282 | 188 | 7 | 135 | 403 | 120 | 398 | 6.87e-24 | 105 |
| Msa0050570 | AT1G48030.4 | 27.660 | 282 | 188 | 7 | 135 | 403 | 120 | 398 | 6.87e-24 | 105 |
| Msa0050570 | AT3G17240.1 | 27.660 | 282 | 188 | 6 | 135 | 403 | 120 | 398 | 9.43e-23 | 101 |
| Msa0050570 | AT3G17240.3 | 27.660 | 282 | 188 | 6 | 135 | 403 | 120 | 398 | 9.43e-23 | 101 |
Find 170 sgRNAs with CRISPR-Local
Find 463 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACGCTTTGCTTCCAATTT+TGG | 0.092567 | 1_2:+4489148 | Msa0050570:CDS |
| CCACTGAAGGCCACCCTCTC+TGG | 0.136948 | 1_2:+4493536 | Msa0050570:CDS |
| GAGTTTGCTGGTATCTTTAA+TGG | 0.157959 | 1_2:+4491357 | Msa0050570:CDS |
| AAACATCGGTTCCTTCAATT+TGG | 0.171733 | 1_2:+4492483 | Msa0050570:CDS |
| GGTGAAGAAGAGAGTGTTTC+GGG | 0.199422 | 1_2:-4488939 | None:intergenic |
| ACAATTTCACTGCAGAATTT+AGG | 0.226558 | 1_2:+4492316 | Msa0050570:intron |
| AAACTTCATACCTTAGTATT+AGG | 0.232538 | 1_2:-4491696 | None:intergenic |
| GCCATTGCTGCTTGCTTCAT+TGG | 0.244519 | 1_2:-4488878 | None:intergenic |
| TAATTTATCCTGCACAAAAT+AGG | 0.258352 | 1_2:+4495789 | Msa0050570:three_prime_UTR |
| AGAGTGAAGGAGCGAGAAAA+TGG | 0.259312 | 1_2:-4488971 | None:intergenic |
| GCTGAGTTGCAGAGGCTTAC+TGG | 0.274604 | 1_2:+4490977 | Msa0050570:CDS |
| GAATAATACAAATTGGTCTT+TGG | 0.276446 | 1_2:-4488775 | None:intergenic |
| TTTGAAGAAAGCAATGGTTT+TGG | 0.285225 | 1_2:+4490896 | Msa0050570:intron |
| TCTCACTCCAGTTGCTTTGA+TGG | 0.293228 | 1_2:+4492535 | Msa0050570:CDS |
| TACATTGCCTTGGAGTTTGC+TGG | 0.310725 | 1_2:+4491345 | Msa0050570:CDS |
| AGCAGCGTTAGCACCAAAAT+TGG | 0.316676 | 1_2:-4489161 | None:intergenic |
| TCTATTGCATATTCCTTTCC+AGG | 0.317991 | 1_2:-4491261 | None:intergenic |
| GGATTGAGAGATTAGGGTTT+TGG | 0.321278 | 1_2:-4489011 | None:intergenic |
| CCCTTCATTCCTGATATTCC+TGG | 0.322317 | 1_2:+4491243 | Msa0050570:CDS |
| CCCTCTCTGGGCTTCCAGAC+CGG | 0.323993 | 1_2:+4493549 | Msa0050570:CDS |
| GAGAGTGTTTCGGGTAAGTA+AGG | 0.332461 | 1_2:-4488930 | None:intergenic |
| GCTCGCACGCACGCTACATT+TGG | 0.334156 | 1_2:-4488735 | None:intergenic |
| TATTCCTTTCCAGGAATATC+AGG | 0.334157 | 1_2:-4491252 | None:intergenic |
| AGCGAAGGTGCGGCGGGGAG+GGG | 0.337776 | 1_2:-4489032 | None:intergenic |
| GCGAGAAAATGGGAAGGTTT+TGG | 0.339049 | 1_2:-4488960 | None:intergenic |
| AACATCGGTTCCTTCAATTT+GGG | 0.350449 | 1_2:+4492484 | Msa0050570:CDS |
| AGCCAACAAAACCTGATTAT+AGG | 0.353075 | 1_2:+4492594 | Msa0050570:CDS |
| CCTCTCTGGGCTTCCAGACC+GGG | 0.370019 | 1_2:+4493550 | Msa0050570:CDS |
| GGGAGGGGATTGAGAGATTA+GGG | 0.370258 | 1_2:-4489017 | None:intergenic |
| CCAACAATGGCAATCTTCTC+AGG | 0.371658 | 1_2:-4491315 | None:intergenic |
| CACTGAAGGCCACCCTCTCT+GGG | 0.374084 | 1_2:+4493537 | Msa0050570:CDS |
| AATGTATATTACCTATAATC+AGG | 0.374502 | 1_2:-4492605 | None:intergenic |
| CTTATTTAATTTGAAGCAGT+TGG | 0.384914 | 1_2:+4495686 | Msa0050570:three_prime_UTR |
| ACAGCGAAGGTGCGGCGGGG+AGG | 0.385464 | 1_2:-4489034 | None:intergenic |
| AAGGCATCGGCAAGTTTCTC+TGG | 0.389438 | 1_2:-4494441 | None:intergenic |
| ATGAGTTGAATAATACAAAT+TGG | 0.398261 | 1_2:-4488782 | None:intergenic |
| ACCATCCACGGTACCTTTGC+TGG | 0.403218 | 1_2:-4491640 | None:intergenic |
| CTACAGGAGATTCCTCAGTA+TGG | 0.404625 | 1_2:-4491578 | None:intergenic |
| TGTCTTGAAAGCTCAGTTGC+CGG | 0.405143 | 1_2:-4495503 | None:intergenic |
| AACTGAAACTAAAATGTGTT+TGG | 0.416281 | 1_2:-4491211 | None:intergenic |
| CAGCGAAGGTGCGGCGGGGA+GGG | 0.417528 | 1_2:-4489033 | None:intergenic |
| GAGTGAAGGAGCGAGAAAAT+GGG | 0.424845 | 1_2:-4488970 | None:intergenic |
| TGGTGAAGAAGAGAGTGTTT+CGG | 0.426258 | 1_2:-4488940 | None:intergenic |
| CCTCACACAGTTGATGTTGA+TGG | 0.426893 | 1_2:+4491174 | Msa0050570:CDS |
| TCTAATGTCAAGTTGATTGA+AGG | 0.429954 | 1_2:+4491025 | Msa0050570:CDS |
| TGTGTTCTCCCACCACCAAT+TGG | 0.431186 | 1_2:+4493335 | Msa0050570:CDS |
| CGGGGTGAGCTCATTTGAAA+AGG | 0.431398 | 1_2:+4495539 | Msa0050570:three_prime_UTR |
| ACTCCCTCCATCAAAGCAAC+TGG | 0.439081 | 1_2:-4492542 | None:intergenic |
| GTTCCTTCAATTTGGGCAAT+CGG | 0.441096 | 1_2:+4492491 | Msa0050570:CDS |
| TTCACCATCGGCGCTGGTAG+TGG | 0.444324 | 1_2:+4489112 | Msa0050570:CDS |
| TTTGCAGTTGCTATTAAAGC+TGG | 0.444400 | 1_2:+4493746 | Msa0050570:CDS |
| GCACAGGCTGTAGAACAATA+TGG | 0.445183 | 1_2:+4493482 | Msa0050570:intron |
| CTTGATTTACCTGTGAATCA+AGG | 0.448766 | 1_2:-4493868 | None:intergenic |
| TCTCATATTATGTTTGCTAC+AGG | 0.452576 | 1_2:+4491666 | Msa0050570:CDS |
| AGAAACTTGCCGATGCCTTA+AGG | 0.453029 | 1_2:+4494445 | Msa0050570:three_prime_UTR |
| ACAGTGAACCTAAGCATGAT+TGG | 0.455004 | 1_2:+4490930 | Msa0050570:CDS |
| TGTATTTATACGACAAAAGC+AGG | 0.455244 | 1_2:+4491398 | Msa0050570:CDS |
| CCTGAGAAGATTGCCATTGT+TGG | 0.456099 | 1_2:+4491315 | Msa0050570:CDS |
| TCGAAAGAGCCTTGATTCAC+AGG | 0.456430 | 1_2:+4493859 | Msa0050570:CDS |
| CGCGGACAGCGAAGGTGCGG+CGG | 0.457016 | 1_2:-4489039 | None:intergenic |
| GGGGAGGGGATTGAGAGATT+AGG | 0.458540 | 1_2:-4489018 | None:intergenic |
| TTACGTGCCGCCGACACCTC+CGG | 0.460902 | 1_2:-4489224 | None:intergenic |
| AGGACGCAAACCTAATACTA+AGG | 0.462907 | 1_2:+4491686 | Msa0050570:CDS |
| GCGGACAGCGAAGGTGCGGC+GGG | 0.464036 | 1_2:-4489038 | None:intergenic |
| AATACAAATTGGTCTTTGGC+TGG | 0.465278 | 1_2:-4488771 | None:intergenic |
| TCTCCGATTGCCCAAATTGA+AGG | 0.476874 | 1_2:-4492494 | None:intergenic |
| ACTCCAGTTGCTTTGATGGA+GGG | 0.482584 | 1_2:+4492539 | Msa0050570:CDS |
| TCCAGGAATATCAGGAATGA+AGG | 0.485140 | 1_2:-4491244 | None:intergenic |
| GTGAGACCAACTCCTCCAAT+TGG | 0.485622 | 1_2:-4493350 | None:intergenic |
| AAACTACTCCAATCATGCTT+AGG | 0.489785 | 1_2:-4490938 | None:intergenic |
| ACAAACTCCTCAGCTGCGGT+TGG | 0.490186 | 1_2:-4493809 | None:intergenic |
| AGTTGCTTTGATGGAGGGAG+TGG | 0.491872 | 1_2:+4492544 | Msa0050570:CDS |
| TCGAAGTCATAGTGGATGGC+GGG | 0.494927 | 1_2:-4489085 | None:intergenic |
| CAATCGGAGATGCTACAAAC+AGG | 0.496018 | 1_2:+4492507 | Msa0050570:CDS |
| TTCCTCTGAATATGTACAAA+GGG | 0.496817 | 1_2:-4495624 | None:intergenic |
| CAAACTCCTCAGCTGCGGTT+GGG | 0.497195 | 1_2:-4493808 | None:intergenic |
| GGGGTGAGCTCATTTGAAAA+GGG | 0.498588 | 1_2:+4495540 | Msa0050570:three_prime_UTR |
| CCACCACCAATTGGAGGAGT+TGG | 0.500529 | 1_2:+4493344 | Msa0050570:CDS |
| GACGTGTTAAATAAGCACTT+TGG | 0.506061 | 1_2:+4488829 | Msa0050570:five_prime_UTR |
| AAAGCAATATTGTTAAGTTC+CGG | 0.508995 | 1_2:-4494403 | None:intergenic |
| TTCACTGCAGAATTTAGGAC+TGG | 0.509056 | 1_2:+4492321 | Msa0050570:intron |
| CTTCCTAGTGGGAGTCCTCA+TGG | 0.514013 | 1_2:-4493834 | None:intergenic |
| TCATCCTTACCTTAAGGCAT+CGG | 0.514863 | 1_2:-4494454 | None:intergenic |
| GAGAGAAGGTGTGAGAGTGA+AGG | 0.516201 | 1_2:-4488984 | None:intergenic |
| CATTCCTGATATTCCTGGAA+AGG | 0.522049 | 1_2:+4491248 | Msa0050570:CDS |
| CACTCCAGTTGCTTTGATGG+AGG | 0.522427 | 1_2:+4492538 | Msa0050570:CDS |
| CGATTCAGCGCGGACAGCGA+AGG | 0.522983 | 1_2:-4489047 | None:intergenic |
| TAAGGGAGAAGAACAAGAGA+GGG | 0.523490 | 1_2:-4488912 | None:intergenic |
| GACCTCTTCACCATCGGCGC+TGG | 0.525583 | 1_2:+4489106 | Msa0050570:CDS |
| TGGTGGGAGAACACAGCAGC+AGG | 0.526537 | 1_2:-4493327 | None:intergenic |
| AAGACAATACATGAAATAGC+GGG | 0.527633 | 1_2:+4495520 | Msa0050570:three_prime_UTR |
| GGTGGTATCCGATGAGATAG+TGG | 0.536762 | 1_2:-4489203 | None:intergenic |
| TATCCTGCACAAAATAGGAT+GGG | 0.538621 | 1_2:+4495794 | Msa0050570:three_prime_UTR |
| AGAAGATTGCCATTGTTGGT+GGG | 0.539271 | 1_2:+4491319 | Msa0050570:CDS |
| ACCAATGAAGCAAGCAGCAA+TGG | 0.540077 | 1_2:+4488877 | Msa0050570:exon |
| AGAGTGTTTCGGGTAAGTAA+GGG | 0.540382 | 1_2:-4488929 | None:intergenic |
| CCAGAGAGGGTGGCCTTCAG+TGG | 0.541109 | 1_2:-4493536 | None:intergenic |
| GCTGCCTTAGTGATAGCTAC+AGG | 0.541775 | 1_2:-4491594 | None:intergenic |
| GAGAAGATTGCCATTGTTGG+TGG | 0.542063 | 1_2:+4491318 | Msa0050570:CDS |
| TGCTAAAGATGGATCAATAG+AGG | 0.542879 | 1_2:+4492363 | Msa0050570:CDS |
| AATTTAGGACTGGAGTCTGT+TGG | 0.543197 | 1_2:+4492331 | Msa0050570:CDS |
| GAAGATTGCCATTGTTGGTG+GGG | 0.543504 | 1_2:+4491320 | Msa0050570:CDS |
| GTCAAGTTGATTGAAGGCCG+TGG | 0.546121 | 1_2:+4491031 | Msa0050570:CDS |
| GTCTGGAAGCCCAGAGAGGG+TGG | 0.547984 | 1_2:-4493546 | None:intergenic |
| CCAACTCCTCCAATTGGTGG+TGG | 0.554910 | 1_2:-4493344 | None:intergenic |
| CTCACACAGTTGATGTTGAT+GGG | 0.555032 | 1_2:+4491175 | Msa0050570:CDS |
| CTCTTTCGAATCTTCCTAGT+GGG | 0.556074 | 1_2:-4493845 | None:intergenic |
| GTAAGGGAGAAGAACAAGAG+AGG | 0.557001 | 1_2:-4488913 | None:intergenic |
| TCGGATACCACCGGAGGTGT+CGG | 0.560790 | 1_2:+4489214 | Msa0050570:CDS |
| TTATCCTGCACAAAATAGGA+TGG | 0.562058 | 1_2:+4495793 | Msa0050570:three_prime_UTR |
| CTCTCTTTAAAGACCAGCAA+AGG | 0.565512 | 1_2:+4491627 | Msa0050570:CDS |
| ACCGCCACTACCAGCGCCGA+TGG | 0.569356 | 1_2:-4489116 | None:intergenic |
| ACCAGCAAAGGTACCGTGGA+TGG | 0.570642 | 1_2:+4491639 | Msa0050570:CDS |
| GTTGATTGAAGGCCGTGGAA+AGG | 0.572186 | 1_2:+4491036 | Msa0050570:CDS |
| GTTCTCCCACCACCAATTGG+AGG | 0.573074 | 1_2:+4493338 | Msa0050570:CDS |
| AAGATTGCCATTGTTGGTGG+GGG | 0.574113 | 1_2:+4491321 | Msa0050570:CDS |
| TCCGTTCTCCACTATCTCAT+CGG | 0.574933 | 1_2:+4489195 | Msa0050570:CDS |
| GGTGTGAAGATTGCTAAAGA+TGG | 0.580574 | 1_2:+4492352 | Msa0050570:CDS |
| GTCCGCGCTGAATCGCAAAA+CGG | 0.581424 | 1_2:+4489055 | Msa0050570:CDS |
| GCAGAAAATATGGCTCTAAG+AGG | 0.582671 | 1_2:+4491546 | Msa0050570:CDS |
| ATCCCTTTGTACATATTCAG+AGG | 0.583715 | 1_2:+4495622 | Msa0050570:three_prime_UTR |
| ACCATCGGCGCTGGTAGTGG+CGG | 0.583741 | 1_2:+4489115 | Msa0050570:CDS |
| TGAATATGTACAAAGGGATG+AGG | 0.585149 | 1_2:-4495618 | None:intergenic |
| GACTTCGACCTCTTCACCAT+CGG | 0.585336 | 1_2:+4489100 | Msa0050570:CDS |
| CAGCGCGGACAGCGAAGGTG+CGG | 0.586569 | 1_2:-4489042 | None:intergenic |
| CCGGTCTGGAAGCCCAGAGA+GGG | 0.587282 | 1_2:-4493549 | None:intergenic |
| TACCAGCGCCGATGGTGAAG+AGG | 0.587460 | 1_2:-4489108 | None:intergenic |
| TGAAGAGGTCGAAGTCATAG+TGG | 0.590713 | 1_2:-4489093 | None:intergenic |
| AATGAAGCAAAAGCTGTAGC+CGG | 0.591095 | 1_2:+4494384 | Msa0050570:CDS |
| CATTCACCCAACCGCAGCTG+AGG | 0.593036 | 1_2:+4493802 | Msa0050570:CDS |
| TTTCCTCTGAATATGTACAA+AGG | 0.595056 | 1_2:-4495625 | None:intergenic |
| ATCTCCTGTAGCTATCACTA+AGG | 0.598330 | 1_2:+4491590 | Msa0050570:CDS |
| GCAGACTTTGATGCTACTGT+AGG | 0.605910 | 1_2:+4493779 | Msa0050570:CDS |
| GAAGGAGCGAGAAAATGGGA+AGG | 0.606162 | 1_2:-4488966 | None:intergenic |
| ACTATCTCATCGGATACCAC+CGG | 0.607136 | 1_2:+4489205 | Msa0050570:CDS |
| GAGGTCGAAGTCATAGTGGA+TGG | 0.611488 | 1_2:-4489089 | None:intergenic |
| TCACCATGAGGACTCCCACT+AGG | 0.611633 | 1_2:+4493831 | Msa0050570:CDS |
| CAAGACAATACATGAAATAG+CGG | 0.617151 | 1_2:+4495519 | Msa0050570:three_prime_UTR |
| TTTGCGAGGATTTGATGAAG+AGG | 0.617316 | 1_2:+4491422 | Msa0050570:CDS |
| AGAATCATCCCACCTTTCCA+CGG | 0.618295 | 1_2:-4491048 | None:intergenic |
| AAAGATACCAGCAAACTCCA+AGG | 0.619374 | 1_2:-4491352 | None:intergenic |
| ATCCTGCACAAAATAGGATG+GGG | 0.619402 | 1_2:+4495795 | Msa0050570:three_prime_UTR |
| TATTAAAGCTGGATTGACAA+AGG | 0.619694 | 1_2:+4493757 | Msa0050570:CDS |
| CCAGGAATATCAGGAATGAA+GGG | 0.621948 | 1_2:-4491243 | None:intergenic |
| CAACTCCTCCAATTGGTGGT+GGG | 0.623436 | 1_2:-4493343 | None:intergenic |
| TCCGATGAGATAGTGGAGAA+CGG | 0.624800 | 1_2:-4489196 | None:intergenic |
| CGAAGTCATAGTGGATGGCG+GGG | 0.627610 | 1_2:-4489084 | None:intergenic |
| CCATCAACATCAACTGTGTG+AGG | 0.629501 | 1_2:-4491174 | None:intergenic |
| GTCGAAGTCATAGTGGATGG+CGG | 0.633614 | 1_2:-4489086 | None:intergenic |
| TGATGAATACTCTCAAACAT+CGG | 0.635283 | 1_2:+4492469 | Msa0050570:CDS |
| TGGAAGCAAAGCGTGAAGCA+CGG | 0.635699 | 1_2:-4489141 | None:intergenic |
| GCTATCACTAAGGCAGCTGA+TGG | 0.636893 | 1_2:+4491600 | Msa0050570:CDS |
| GTTGGAGTTGAGACACAGCA+TGG | 0.639703 | 1_2:+4495704 | Msa0050570:three_prime_UTR |
| TATTCAGAGGAAATCTCATG+AGG | 0.640406 | 1_2:+4495635 | Msa0050570:three_prime_UTR |
| AGACCAACTCCTCCAATTGG+TGG | 0.641871 | 1_2:-4493347 | None:intergenic |
| CGGACAGCGAAGGTGCGGCG+GGG | 0.644049 | 1_2:-4489037 | None:intergenic |
| GATACCACCGGAGGTGTCGG+CGG | 0.653808 | 1_2:+4489217 | Msa0050570:CDS |
| GGGTGAGCTCATTTGAAAAG+GGG | 0.662931 | 1_2:+4495541 | Msa0050570:three_prime_UTR |
| GGTGACAAACTCCTCAGCTG+CGG | 0.664472 | 1_2:-4493813 | None:intergenic |
| GCTCTTTCGAATCTTCCTAG+TGG | 0.665678 | 1_2:-4493846 | None:intergenic |
| GGTGAGCTCATTTGAAAAGG+GGG | 0.667993 | 1_2:+4495542 | Msa0050570:three_prime_UTR |
| ATTCAGAGGAAATCTCATGA+GGG | 0.669097 | 1_2:+4495636 | Msa0050570:three_prime_UTR |
| CGTGCCGCCGACACCTCCGG+TGG | 0.685458 | 1_2:-4489221 | None:intergenic |
| AGGTATTGAATTCCATACTG+AGG | 0.687621 | 1_2:+4491566 | Msa0050570:CDS |
| AGACAATACATGAAATAGCG+GGG | 0.688655 | 1_2:+4495521 | Msa0050570:three_prime_UTR |
| AAAGACCAGCAAAGGTACCG+TGG | 0.688890 | 1_2:+4491635 | Msa0050570:CDS |
| CTGAGGAGTTTGTCACCATG+AGG | 0.689480 | 1_2:+4493819 | Msa0050570:CDS |
| CCCGGTCTGGAAGCCCAGAG+AGG | 0.691224 | 1_2:-4493550 | None:intergenic |
| ATCTCATCGGATACCACCGG+AGG | 0.706409 | 1_2:+4489208 | Msa0050570:CDS |
| AATATGAGAGAAACCATCCA+CGG | 0.716565 | 1_2:-4491652 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGTTTTAATATATTCTA+GGG | + | chr1_2:4494351-4494370 | Msa0050570:intron | 10.0% |
| !!! | GATTTTTTGTATTGATTATT+AGG | + | chr1_2:4490330-4490349 | Msa0050570:intron | 15.0% |
| !!! | TTTTAGCATATGAAATAATT+TGG | + | chr1_2:4491834-4491853 | Msa0050570:intron | 15.0% |
| !! | TTTCCATATTTATCAAAATT+AGG | + | chr1_2:4492109-4492128 | Msa0050570:intron | 15.0% |
| !!! | ATTATGATTTACTAACATTT+TGG | + | chr1_2:4493453-4493472 | Msa0050570:intron | 15.0% |
| !! | AATATGATACTTAATTCATT+TGG | + | chr1_2:4494150-4494169 | Msa0050570:intron | 15.0% |
| !! | ATATGATACTTAATTCATTT+GGG | + | chr1_2:4494151-4494170 | Msa0050570:intron | 15.0% |
| !!! | GTTTTGTTTTAATATATTCT+AGG | + | chr1_2:4494350-4494369 | Msa0050570:intron | 15.0% |
| !!! | TTAAAAAAAATGGATTTTGT+AGG | - | chr1_2:4494689-4494708 | None:intergenic | 15.0% |
| !!! | TTTGATTAAATGATTTTTTG+TGG | + | chr1_2:4494876-4494895 | Msa0050570:intron | 15.0% |
| !! | AATGATTTATTCACAAAAAA+AGG | + | chr1_2:4494915-4494934 | Msa0050570:intron | 15.0% |
| !! | AGTGAAAAATAAATTACAAA+TGG | - | chr1_2:4495594-4495613 | None:intergenic | 15.0% |
| !!! | ATGAGTTGAATAATACAAAT+TGG | - | chr1_2:4488785-4488804 | None:intergenic | 20.0% |
| !!! | TTTTAGTTAATTTCACAGTT+AGG | + | chr1_2:4489282-4489301 | Msa0050570:intron | 20.0% |
| !!! | ATTTGAATAACCAACTTTTT+AGG | + | chr1_2:4489856-4489875 | Msa0050570:intron | 20.0% |
| !! | AAATTAACAACCTAAAAAGT+TGG | - | chr1_2:4489869-4489888 | None:intergenic | 20.0% |
| !! | GTTAATTTAGTTGAAATATG+TGG | + | chr1_2:4489881-4489900 | Msa0050570:intron | 20.0% |
| !!! | TTTTCTCTGAAAAAAAGAAA+TGG | - | chr1_2:4490238-4490257 | None:intergenic | 20.0% |
| !! | TTAAACAATCTTTAAACTGT+TGG | - | chr1_2:4490496-4490515 | None:intergenic | 20.0% |
| !! | TACATTCAATAGATAGTTAA+TGG | - | chr1_2:4490692-4490711 | None:intergenic | 20.0% |
| !! | TTACAAAGCTATTTATTACA+TGG | - | chr1_2:4491086-4491105 | None:intergenic | 20.0% |
| !!! | TAGTGCTTATAATCTTTTTT+TGG | - | chr1_2:4491799-4491818 | None:intergenic | 20.0% |
| !!! | TGCTAAAAGAGTATTTTTTT+TGG | - | chr1_2:4491822-4491841 | None:intergenic | 20.0% |
| !! | ATTCATGTAATATTAAGCAA+GGG | - | chr1_2:4492063-4492082 | None:intergenic | 20.0% |
| !! | TATTCATGTAATATTAAGCA+AGG | - | chr1_2:4492064-4492083 | None:intergenic | 20.0% |
| !!! | GTTCCTAATTTTGATAAATA+TGG | - | chr1_2:4492115-4492134 | None:intergenic | 20.0% |
| !! | AATGTATATTACCTATAATC+AGG | - | chr1_2:4492608-4492627 | None:intergenic | 20.0% |
| !! | ACAAGCATTAAAAATTGAAT+TGG | + | chr1_2:4492768-4492787 | Msa0050570:intron | 20.0% |
| !! | TCATTTGTAGATATATTGAA+TGG | + | chr1_2:4493224-4493243 | Msa0050570:intron | 20.0% |
| !! | ATTCATATGGAAATGATATA+TGG | + | chr1_2:4494194-4494213 | Msa0050570:intron | 20.0% |
| !! | AATGATATATGGTACAAAAT+TGG | + | chr1_2:4494205-4494224 | Msa0050570:intron | 20.0% |
| !! | ATGATATATGGTACAAAATT+GGG | + | chr1_2:4494206-4494225 | Msa0050570:intron | 20.0% |
| !!! | TTTTCTAAAAGTTTTCGTAA+TGG | + | chr1_2:4494325-4494344 | Msa0050570:intron | 20.0% |
| !!! | TTTTGTAGGTAATAAGAAAT+GGG | - | chr1_2:4494675-4494694 | None:intergenic | 20.0% |
| !!! | ATTTTGTAGGTAATAAGAAA+TGG | - | chr1_2:4494676-4494695 | None:intergenic | 20.0% |
| !!! | AAGGTTTAAAATGATTAAGT+TGG | + | chr1_2:4494934-4494953 | Msa0050570:intron | 20.0% |
| !!! | ATTTTTAATAATGTTTACGC+AGG | + | chr1_2:4495460-4495479 | Msa0050570:intron | 20.0% |
| !!! | GATCATTTTATTTAACATCA+AGG | - | chr1_2:4495663-4495682 | None:intergenic | 20.0% |
| !!! | GAATAATACAAATTGGTCTT+TGG | - | chr1_2:4488778-4488797 | None:intergenic | 25.0% |
| ! | AGATGTTGTTAATATGATGT+GGG | + | chr1_2:4489366-4489385 | Msa0050570:intron | 25.0% |
| ! | TAATGAGAACGTTGTAAAAA+TGG | + | chr1_2:4489457-4489476 | Msa0050570:intron | 25.0% |
| ! | CATTTCTCTATCATGTTATT+AGG | - | chr1_2:4489488-4489507 | None:intergenic | 25.0% |
| !!! | TGTCTAAAAGTGTCAAAAAA+TGG | - | chr1_2:4489523-4489542 | None:intergenic | 25.0% |
| ! | TTGAAATATGTGGTTAATCA+TGG | + | chr1_2:4489891-4489910 | Msa0050570:intron | 25.0% |
| ! | TAATCATGGTATATAGTTCA+TGG | + | chr1_2:4489905-4489924 | Msa0050570:intron | 25.0% |
| ! | GTTAGAAGAACACATATATT+AGG | + | chr1_2:4490119-4490138 | Msa0050570:intron | 25.0% |
| !!! | TTTTAAGAGAAGCATTTCTT+TGG | + | chr1_2:4490265-4490284 | Msa0050570:intron | 25.0% |
| !!! | TTTGTATTGATTATTAGGAG+TGG | + | chr1_2:4490335-4490354 | Msa0050570:intron | 25.0% |
| !!! | TTGTATTGATTATTAGGAGT+GGG | + | chr1_2:4490336-4490355 | Msa0050570:intron | 25.0% |
| !! | AAAATTGTGTATCTAAAACC+AGG | + | chr1_2:4490425-4490444 | Msa0050570:intron | 25.0% |
| !! | AAATTGTGTATCTAAAACCA+GGG | + | chr1_2:4490426-4490445 | Msa0050570:intron | 25.0% |
| !! | ATTTTCCAAAAACCAAATAC+GGG | - | chr1_2:4490463-4490482 | None:intergenic | 25.0% |
| !! | CATTTTCCAAAAACCAAATA+CGG | - | chr1_2:4490464-4490483 | None:intergenic | 25.0% |
| !! | AACTTTCATGACAACTTTTA+AGG | - | chr1_2:4490745-4490764 | None:intergenic | 25.0% |
| ! | TCATGAAAGTTGTTCAAATT+TGG | + | chr1_2:4490754-4490773 | Msa0050570:intron | 25.0% |
| ! | AGCTATTTATTACATGGAAA+TGG | - | chr1_2:4491080-4491099 | None:intergenic | 25.0% |
| ! | AACTGAAACTAAAATGTGTT+TGG | - | chr1_2:4491214-4491233 | None:intergenic | 25.0% |
| !!! | AAACACATTTTAGTTTCAGT+TGG | + | chr1_2:4491213-4491232 | Msa0050570:CDS | 25.0% |
| ! | AAACTTCATACCTTAGTATT+AGG | - | chr1_2:4491699-4491718 | None:intergenic | 25.0% |
| ! | TAGCATATGAAATAATTTGG+AGG | + | chr1_2:4491837-4491856 | Msa0050570:intron | 25.0% |
| ! | AGCATATGAAATAATTTGGA+GGG | + | chr1_2:4491838-4491857 | Msa0050570:intron | 25.0% |
| ! | TTCTGATTGAAGGTAATTAT+TGG | - | chr1_2:4491884-4491903 | None:intergenic | 25.0% |
| ! | TTCATGTAATATTAAGCAAG+GGG | - | chr1_2:4492062-4492081 | None:intergenic | 25.0% |
| ! | ATTATAAATGGTTAAGCAGT+TGG | - | chr1_2:4492728-4492747 | None:intergenic | 25.0% |
| !! | TTACACCATTGTTTCTTAAA+TGG | + | chr1_2:4492938-4492957 | Msa0050570:intron | 25.0% |
| ! | AGAATATAACACAATCTGTT+AGG | - | chr1_2:4493289-4493308 | None:intergenic | 25.0% |
| !! | CTATTAGTTTCATAAAAACC+CGG | - | chr1_2:4493571-4493590 | None:intergenic | 25.0% |
| !! | TAAGATTTTGCATGATAAAC+AGG | + | chr1_2:4493721-4493740 | Msa0050570:intron | 25.0% |
| !! | AAGATTTTGCATGATAAACA+GGG | + | chr1_2:4493722-4493741 | Msa0050570:intron | 25.0% |
| ! | AAAGCAATATTGTTAAGTTC+CGG | - | chr1_2:4494406-4494425 | None:intergenic | 25.0% |
| !! | AGAACTTTTGTGTTATACTA+TGG | + | chr1_2:4494536-4494555 | Msa0050570:intron | 25.0% |
| ! | TAATAAGAAATGGGAAATTG+GGG | - | chr1_2:4494666-4494685 | None:intergenic | 25.0% |
| ! | GTAATAAGAAATGGGAAATT+GGG | - | chr1_2:4494667-4494686 | None:intergenic | 25.0% |
| !!! | ATTTTTTTTCTCTCCATTGA+TGG | + | chr1_2:4494708-4494727 | Msa0050570:intron | 25.0% |
| ! | TAGTTACAAAACTCAGAATT+TGG | + | chr1_2:4494761-4494780 | Msa0050570:intron | 25.0% |
| !! | ACAAAATTTGAAGTATCTTG+TGG | + | chr1_2:4494793-4494812 | Msa0050570:intron | 25.0% |
| !! | CAAAATTTGAAGTATCTTGT+GGG | + | chr1_2:4494794-4494813 | Msa0050570:intron | 25.0% |
| !! | AAAAGACTTGACTACATTTT+CGG | - | chr1_2:4495066-4495085 | None:intergenic | 25.0% |
| !!! | CTTATTTAATTTGAAGCAGT+TGG | + | chr1_2:4495686-4495705 | Msa0050570:three_prime_UTR | 25.0% |
| ! | TAATTTATCCTGCACAAAAT+AGG | + | chr1_2:4495789-4495808 | Msa0050570:three_prime_UTR | 25.0% |
| GTTCGTAAAACTTACTCATT+TGG | - | chr1_2:4489340-4489359 | None:intergenic | 30.0% | |
| CACATCATATTAACAACATC+TGG | - | chr1_2:4489367-4489386 | None:intergenic | 30.0% | |
| CAGATGTTGTTAATATGATG+TGG | + | chr1_2:4489365-4489384 | Msa0050570:intron | 30.0% | |
| AAACAATGGAGAGAGAAAAA+AGG | - | chr1_2:4489590-4489609 | None:intergenic | 30.0% | |
| TCTTCATTGGTCAAAAACAA+TGG | - | chr1_2:4489604-4489623 | None:intergenic | 30.0% | |
| GTCATAAAGTTGTTAGCAAA+TGG | + | chr1_2:4489639-4489658 | Msa0050570:intron | 30.0% | |
| CATTGCTCAACATGATATTA+TGG | + | chr1_2:4489674-4489693 | Msa0050570:intron | 30.0% | |
| AGCAAATTAGCAAGTCAATA+AGG | - | chr1_2:4489773-4489792 | None:intergenic | 30.0% | |
| AATGTTTAACCAAAGCGAAA+AGG | - | chr1_2:4489796-4489815 | None:intergenic | 30.0% | |
| !! | TTCTCGTGTTTTTGTCAAAT+GGG | - | chr1_2:4489991-4490010 | None:intergenic | 30.0% |
| !! | ATTCTCGTGTTTTTGTCAAA+TGG | - | chr1_2:4489992-4490011 | None:intergenic | 30.0% |
| AACACGAGAATTAAGAAAGT+TGG | + | chr1_2:4490001-4490020 | Msa0050570:intron | 30.0% | |
| CTCTCTATGATGAAATCATT+GGG | - | chr1_2:4490079-4490098 | None:intergenic | 30.0% | |
| AGAAGAACACATATATTAGG+AGG | + | chr1_2:4490122-4490141 | Msa0050570:intron | 30.0% | |
| ATTTGAACACTAGACTGATT+GGG | + | chr1_2:4490155-4490174 | Msa0050570:intron | 30.0% | |
| !!! | CGTATTTGGTTTTTGGAAAA+TGG | + | chr1_2:4490462-4490481 | Msa0050570:intron | 30.0% |
| ATCTAAAGACTTGAAAGTAG+TGG | - | chr1_2:4490589-4490608 | None:intergenic | 30.0% | |
| AGTTGAACACCTGAAAATTA+TGG | + | chr1_2:4490617-4490636 | Msa0050570:intron | 30.0% | |
| ATCTCATTAACCACGTATTT+GGG | - | chr1_2:4490652-4490671 | None:intergenic | 30.0% | |
| AATCTCATTAACCACGTATT+TGG | - | chr1_2:4490653-4490672 | None:intergenic | 30.0% | |
| !! | TTTCATGACAACTTTTAAGG+CGG | - | chr1_2:4490742-4490761 | None:intergenic | 30.0% |
| ! | AAATTCGTGAGAAGATTTTG+AGG | - | chr1_2:4490879-4490898 | None:intergenic | 30.0% |
| ! | TTTGAAGAAAGCAATGGTTT+TGG | + | chr1_2:4490896-4490915 | Msa0050570:intron | 30.0% |
| !! | TCTAATGTCAAGTTGATTGA+AGG | + | chr1_2:4491025-4491044 | Msa0050570:CDS | 30.0% |
| !! | AGGTTTTGATGGTAAATCAA+GGG | - | chr1_2:4491298-4491317 | None:intergenic | 30.0% |
| TGTATTTATACGACAAAAGC+AGG | + | chr1_2:4491398-4491417 | Msa0050570:CDS | 30.0% | |
| ! | AGATTTTGTCGCAGAAAATA+TGG | + | chr1_2:4491536-4491555 | Msa0050570:CDS | 30.0% |
| ! | TCTCATATTATGTTTGCTAC+AGG | + | chr1_2:4491666-4491685 | Msa0050570:CDS | 30.0% |
| GATTGAAGGTAATTATTGGA+AGG | - | chr1_2:4491880-4491899 | None:intergenic | 30.0% | |
| TTCAATGACTTTCTGATTGA+AGG | - | chr1_2:4491894-4491913 | None:intergenic | 30.0% | |
| CAATCAGAAAGTCATTGAAA+AGG | + | chr1_2:4491895-4491914 | Msa0050570:intron | 30.0% | |
| ! | TTTTCCCATGATACACTTTT+AGG | + | chr1_2:4491994-4492013 | Msa0050570:intron | 30.0% |
| ! | AAGTCCTAAAAGTGTATCAT+GGG | - | chr1_2:4492001-4492020 | None:intergenic | 30.0% |
| TTAAAATTAGCCAACCCTTA+AGG | - | chr1_2:4492154-4492173 | None:intergenic | 30.0% | |
| AGATAAACAGACAGTTGAAA+CGG | - | chr1_2:4492246-4492265 | None:intergenic | 30.0% | |
| TACAGAAAGAGCTAATAACA+TGG | + | chr1_2:4492275-4492294 | Msa0050570:intron | 30.0% | |
| ACAATTTCACTGCAGAATTT+AGG | + | chr1_2:4492316-4492335 | Msa0050570:intron | 30.0% | |
| TGATGAATACTCTCAAACAT+CGG | + | chr1_2:4492469-4492488 | Msa0050570:CDS | 30.0% | |
| !! | TACCTATAATCAGGTTTTGT+TGG | - | chr1_2:4492599-4492618 | None:intergenic | 30.0% |
| ACTGAAGTCAATCTTTAATC+AGG | - | chr1_2:4492653-4492672 | None:intergenic | 30.0% | |
| ATCAGGGAGATCATTATAAA+TGG | - | chr1_2:4492740-4492759 | None:intergenic | 30.0% | |
| ! | GTTTTTGACACGAATTTGTA+TGG | + | chr1_2:4492880-4492899 | Msa0050570:intron | 30.0% |
| CTTGACCATTTAAGAAACAA+TGG | - | chr1_2:4492946-4492965 | None:intergenic | 30.0% | |
| ! | GAGCTTTAATGGTTTAAAAG+AGG | + | chr1_2:4493007-4493026 | Msa0050570:intron | 30.0% |
| CTTTAATGGTTTAAAAGAGG+TGG | + | chr1_2:4493010-4493029 | Msa0050570:intron | 30.0% | |
| GTGCAAAAAATGAGATGAAT+AGG | - | chr1_2:4493174-4493193 | None:intergenic | 30.0% | |
| ATATAACACAATCTGTTAGG+AGG | - | chr1_2:4493286-4493305 | None:intergenic | 30.0% | |
| !!! | AACATTTTGGTTATTTGCAC+AGG | + | chr1_2:4493466-4493485 | Msa0050570:intron | 30.0% |
| TGCAAAAACAAATGAAGTTC+TGG | + | chr1_2:4493595-4493614 | Msa0050570:intron | 30.0% | |
| GCAAAAACAAATGAAGTTCT+GGG | + | chr1_2:4493596-4493615 | Msa0050570:intron | 30.0% | |
| ! | AGATTTTGCATGATAAACAG+GGG | + | chr1_2:4493723-4493742 | Msa0050570:intron | 30.0% |
| TATTAAAGCTGGATTGACAA+AGG | + | chr1_2:4493757-4493776 | Msa0050570:CDS | 30.0% | |
| ATTTCTGCACAAGATATCAA+CGG | - | chr1_2:4493913-4493932 | None:intergenic | 30.0% | |
| TCTTTCAATTCTCAAGTACA+AGG | - | chr1_2:4494011-4494030 | None:intergenic | 30.0% | |
| AAAAAAAAAAATCCCTGTGC+AGG | + | chr1_2:4494055-4494074 | Msa0050570:intron | 30.0% | |
| ACCACATGTCATTATTCATA+TGG | + | chr1_2:4494181-4494200 | Msa0050570:intron | 30.0% | |
| TCCATATGAATAATGACATG+TGG | - | chr1_2:4494185-4494204 | None:intergenic | 30.0% | |
| !! | CATTTCCAACCATGTTTTTA+TGG | + | chr1_2:4494279-4494298 | Msa0050570:intron | 30.0% |
| CTAAGAGAACCATAAAAACA+TGG | - | chr1_2:4494291-4494310 | None:intergenic | 30.0% | |
| AGTATTTCATCCTTACCTTA+AGG | - | chr1_2:4494463-4494482 | None:intergenic | 30.0% | |
| GTATACTAGATACTAGGTTT+AGG | + | chr1_2:4494561-4494580 | Msa0050570:intron | 30.0% | |
| TCTCTATTATTATCAACCCT+TGG | + | chr1_2:4494603-4494622 | Msa0050570:intron | 30.0% | |
| ! | TTATTATCAACCCTTGGTTT+TGG | + | chr1_2:4494609-4494628 | Msa0050570:intron | 30.0% |
| TATTGAATGTCCAAAACCAA+GGG | - | chr1_2:4494622-4494641 | None:intergenic | 30.0% | |
| TTATTGAATGTCCAAAACCA+AGG | - | chr1_2:4494623-4494642 | None:intergenic | 30.0% | |
| GGTAATAAGAAATGGGAAAT+TGG | - | chr1_2:4494668-4494687 | None:intergenic | 30.0% | |
| !! | ATGTGGAGATTTTTAGGAAA+AGG | + | chr1_2:4494963-4494982 | Msa0050570:intron | 30.0% |
| !! | TGTGGAGATTTTTAGGAAAA+GGG | + | chr1_2:4494964-4494983 | Msa0050570:intron | 30.0% |
| !! | TTTTTAGGAAAAGGGGAATT+TGG | + | chr1_2:4494972-4494991 | Msa0050570:intron | 30.0% |
| !! | TTTTAGGAAAAGGGGAATTT+GGG | + | chr1_2:4494973-4494992 | Msa0050570:intron | 30.0% |
| ATCTTATCCATGTGTTATAG+CGG | + | chr1_2:4495089-4495108 | Msa0050570:intron | 30.0% | |
| !!! | TGGTAGTGGATTTTATACAA+TGG | - | chr1_2:4495223-4495242 | None:intergenic | 30.0% |
| GTTCAAAGAATAAGTAGTAG+TGG | - | chr1_2:4495243-4495262 | None:intergenic | 30.0% | |
| CAAGACAATACATGAAATAG+CGG | + | chr1_2:4495519-4495538 | Msa0050570:three_prime_UTR | 30.0% | |
| AAGACAATACATGAAATAGC+GGG | + | chr1_2:4495520-4495539 | Msa0050570:three_prime_UTR | 30.0% | |
| TTCCTCTGAATATGTACAAA+GGG | - | chr1_2:4495627-4495646 | None:intergenic | 30.0% | |
| TTTCCTCTGAATATGTACAA+AGG | - | chr1_2:4495628-4495647 | None:intergenic | 30.0% | |
| ! | AACTTTTCAAACTTTTCGCA+TGG | + | chr1_2:4495756-4495775 | Msa0050570:three_prime_UTR | 30.0% |
| !! | AATACAAATTGGTCTTTGGC+TGG | - | chr1_2:4488774-4488793 | None:intergenic | 35.0% |
| GACGTGTTAAATAAGCACTT+TGG | + | chr1_2:4488829-4488848 | Msa0050570:five_prime_UTR | 35.0% | |
| GAATAAGAAACCCTAAGCTA+TGG | - | chr1_2:4489259-4489278 | None:intergenic | 35.0% | |
| TTATACCGATATTGCTAGGT+TGG | - | chr1_2:4489317-4489336 | None:intergenic | 35.0% | |
| TTGGTTATACCGATATTGCT+AGG | - | chr1_2:4489321-4489340 | None:intergenic | 35.0% | |
| !!! | TAATTTGCTCCTTTTCGCTT+TGG | + | chr1_2:4489784-4489803 | Msa0050570:intron | 35.0% |
| !! | TCTCGTGTTTTTGTCAAATG+GGG | - | chr1_2:4489990-4490009 | None:intergenic | 35.0% |
| GCTCTCTATGATGAAATCAT+TGG | - | chr1_2:4490080-4490099 | None:intergenic | 35.0% | |
| GATTTGAACACTAGACTGAT+TGG | + | chr1_2:4490154-4490173 | Msa0050570:intron | 35.0% | |
| AAAACCAAATACGGGATAAC+CGG | - | chr1_2:4490455-4490474 | None:intergenic | 35.0% | |
| !!! | GTTATCCCGTATTTGGTTTT+TGG | + | chr1_2:4490455-4490474 | Msa0050570:intron | 35.0% |
| !! | GGTTTTTGGAAAATGGTACT+TGG | + | chr1_2:4490469-4490488 | Msa0050570:intron | 35.0% |
| TTAACAGCTACTGAAGTTAG+AGG | - | chr1_2:4490551-4490570 | None:intergenic | 35.0% | |
| ! | CGTGGTTAACCATAATTTTC+AGG | - | chr1_2:4490629-4490648 | None:intergenic | 35.0% |
| GTCAACACAGTTTAAATGAG+TGG | - | chr1_2:4490720-4490739 | None:intergenic | 35.0% | |
| CACAAAGATATGCATGTAGA+TGG | - | chr1_2:4490809-4490828 | None:intergenic | 35.0% | |
| GCATAGACGAGTAATTTCTT+TGG | - | chr1_2:4490857-4490876 | None:intergenic | 35.0% | |
| CACGAATTTGAAGAAAGCAA+TGG | + | chr1_2:4490890-4490909 | Msa0050570:intron | 35.0% | |
| !!! | AAGAAAGCAATGGTTTTGGA+TGG | + | chr1_2:4490900-4490919 | Msa0050570:intron | 35.0% |
| AAACTACTCCAATCATGCTT+AGG | - | chr1_2:4490941-4490960 | None:intergenic | 35.0% | |
| ATAAAAATGCTGAGTTGCAG+AGG | + | chr1_2:4490969-4490988 | Msa0050570:CDS | 35.0% | |
| !!! | CACATTTTAGTTTCAGTTGG+AGG | + | chr1_2:4491216-4491235 | Msa0050570:CDS | 35.0% |
| TATTCCTTTCCAGGAATATC+AGG | - | chr1_2:4491255-4491274 | None:intergenic | 35.0% | |
| TCTATTGCATATTCCTTTCC+AGG | - | chr1_2:4491264-4491283 | None:intergenic | 35.0% | |
| !! | CAGGTTTTGATGGTAAATCA+AGG | - | chr1_2:4491299-4491318 | None:intergenic | 35.0% |
| !! | GAGTTTGCTGGTATCTTTAA+TGG | + | chr1_2:4491357-4491376 | Msa0050570:CDS | 35.0% |
| !! | AGGTATTGAATTCCATACTG+AGG | + | chr1_2:4491566-4491585 | Msa0050570:CDS | 35.0% |
| AATATGAGAGAAACCATCCA+CGG | - | chr1_2:4491655-4491674 | None:intergenic | 35.0% | |
| !! | GATGCTAAAAGAGTATTTGC+TGG | - | chr1_2:4491772-4491791 | None:intergenic | 35.0% |
| ! | CAAGTCCTAAAAGTGTATCA+TGG | - | chr1_2:4492002-4492021 | None:intergenic | 35.0% |
| AATTCCACATGCTTCTTAGT+TGG | + | chr1_2:4492172-4492191 | Msa0050570:intron | 35.0% | |
| ! | TAGTTGGCTCAATTTCCATA+CGG | + | chr1_2:4492188-4492207 | Msa0050570:intron | 35.0% |
| TGCTAAAGATGGATCAATAG+AGG | + | chr1_2:4492363-4492382 | Msa0050570:CDS | 35.0% | |
| !! | TTGAGAGTATTCATCAACCT+GGG | - | chr1_2:4492465-4492484 | None:intergenic | 35.0% |
| !! | TTTGAGAGTATTCATCAACC+TGG | - | chr1_2:4492466-4492485 | None:intergenic | 35.0% |
| !! | AAACATCGGTTCCTTCAATT+TGG | + | chr1_2:4492483-4492502 | Msa0050570:CDS | 35.0% |
| !! | AACATCGGTTCCTTCAATTT+GGG | + | chr1_2:4492484-4492503 | Msa0050570:CDS | 35.0% |
| AGCCAACAAAACCTGATTAT+AGG | + | chr1_2:4492594-4492613 | Msa0050570:CDS | 35.0% | |
| ! | ATGCTTGTTAAGCAAGATCA+GGG | - | chr1_2:4492756-4492775 | None:intergenic | 35.0% |
| ! | AATGCTTGTTAAGCAAGATC+AGG | - | chr1_2:4492757-4492776 | None:intergenic | 35.0% |
| GGTTTAAAAGAGGTGGAAAA+AGG | + | chr1_2:4493017-4493036 | Msa0050570:intron | 35.0% | |
| GGAAAAAGGAAAATGACTAG+AGG | + | chr1_2:4493031-4493050 | Msa0050570:intron | 35.0% | |
| TTGAATGGCAGCATATAATC+TGG | + | chr1_2:4493239-4493258 | Msa0050570:intron | 35.0% | |
| ! | ACGTCTACACAGCAAATTTT+AGG | + | chr1_2:4493513-4493532 | Msa0050570:CDS | 35.0% |
| ACAAAAACCTGCACAATTTC+AGG | - | chr1_2:4493645-4493664 | None:intergenic | 35.0% | |
| ! | TTTGCAGTTGCTATTAAAGC+TGG | + | chr1_2:4493746-4493765 | Msa0050570:CDS | 35.0% |
| CTTGATTTACCTGTGAATCA+AGG | - | chr1_2:4493871-4493890 | None:intergenic | 35.0% | |
| CTTGATTCACAGGTAAATCA+AGG | + | chr1_2:4493869-4493888 | Msa0050570:intron | 35.0% | |
| GAAGTCGACGTATTCATTAA+TGG | - | chr1_2:4493983-4494002 | None:intergenic | 35.0% | |
| AATTCTCAAGTACAAGGCAA+CGG | - | chr1_2:4494005-4494024 | None:intergenic | 35.0% | |
| TTAACAGACCCAAGTAATCA+TGG | - | chr1_2:4494081-4494100 | None:intergenic | 35.0% | |
| GAGAACCATAAAAACATGGT+TGG | - | chr1_2:4494287-4494306 | None:intergenic | 35.0% | |
| ATGGCAGTATACTAGATACT+AGG | + | chr1_2:4494555-4494574 | Msa0050570:intron | 35.0% | |
| GTCTGTAAAGGAGAAATTTC+AGG | + | chr1_2:4494830-4494849 | Msa0050570:intron | 35.0% | |
| ! | TTCAGCATGTGGAGATTTTT+AGG | + | chr1_2:4494957-4494976 | Msa0050570:intron | 35.0% |
| !! | GTGGAGATTTTTAGGAAAAG+GGG | + | chr1_2:4494965-4494984 | Msa0050570:intron | 35.0% |
| TTTAGGAAAAGGGGAATTTG+GGG | + | chr1_2:4494974-4494993 | Msa0050570:intron | 35.0% | |
| AGAATAAGTAGTAGTGGTAG+TGG | - | chr1_2:4495237-4495256 | None:intergenic | 35.0% | |
| !!! | ACATACATTCCTGCCATTTT+GGG | - | chr1_2:4495303-4495322 | None:intergenic | 35.0% |
| !! | AACATACATTCCTGCCATTT+TGG | - | chr1_2:4495304-4495323 | None:intergenic | 35.0% |
| TTACCAATGCAACATGTTTC+CGG | + | chr1_2:4495351-4495370 | Msa0050570:intron | 35.0% | |
| TATTAGAACATGACAAACGC+CGG | - | chr1_2:4495373-4495392 | None:intergenic | 35.0% | |
| !!! | TTGCTTTTTCGAATGATCTC+CGG | + | chr1_2:4495484-4495503 | Msa0050570:three_prime_UTR | 35.0% |
| AGACAATACATGAAATAGCG+GGG | + | chr1_2:4495521-4495540 | Msa0050570:three_prime_UTR | 35.0% | |
| ! | AAAAGGGGGAATGGAATTTT+GGG | + | chr1_2:4495556-4495575 | Msa0050570:three_prime_UTR | 35.0% |
| TGAATATGTACAAAGGGATG+AGG | - | chr1_2:4495621-4495640 | None:intergenic | 35.0% | |
| ATCCCTTTGTACATATTCAG+AGG | + | chr1_2:4495622-4495641 | Msa0050570:three_prime_UTR | 35.0% | |
| TATTCAGAGGAAATCTCATG+AGG | + | chr1_2:4495635-4495654 | Msa0050570:three_prime_UTR | 35.0% | |
| ATTCAGAGGAAATCTCATGA+GGG | + | chr1_2:4495636-4495655 | Msa0050570:three_prime_UTR | 35.0% | |
| ! | AAACTTTTCGCATGGAAAAG+TGG | + | chr1_2:4495764-4495783 | Msa0050570:three_prime_UTR | 35.0% |
| TTATCCTGCACAAAATAGGA+TGG | + | chr1_2:4495793-4495812 | Msa0050570:three_prime_UTR | 35.0% | |
| TATCCTGCACAAAATAGGAT+GGG | + | chr1_2:4495794-4495813 | Msa0050570:three_prime_UTR | 35.0% | |
| TAAGGGAGAAGAACAAGAGA+GGG | - | chr1_2:4488915-4488934 | None:intergenic | 40.0% | |
| ! | AGAGTGTTTCGGGTAAGTAA+GGG | - | chr1_2:4488932-4488951 | None:intergenic | 40.0% |
| !! | TGGTGAAGAAGAGAGTGTTT+CGG | - | chr1_2:4488943-4488962 | None:intergenic | 40.0% |
| !! | TTGAGAGATTAGGGTTTTGG+TGG | - | chr1_2:4489011-4489030 | None:intergenic | 40.0% |
| ! | GGATTGAGAGATTAGGGTTT+TGG | - | chr1_2:4489014-4489033 | None:intergenic | 40.0% |
| ! | TCACGCTTTGCTTCCAATTT+TGG | + | chr1_2:4489148-4489167 | Msa0050570:CDS | 40.0% |
| AAGTTCCTCTTCCATAGCTT+AGG | + | chr1_2:4489245-4489264 | Msa0050570:intron | 40.0% | |
| AGTTCCTCTTCCATAGCTTA+GGG | + | chr1_2:4489246-4489265 | Msa0050570:intron | 40.0% | |
| AGTGTCCAACCTAGCAATAT+CGG | + | chr1_2:4489309-4489328 | Msa0050570:intron | 40.0% | |
| ! | CCTCTCTTTTCTCTCTTCAT+TGG | - | chr1_2:4489617-4489636 | None:intergenic | 40.0% |
| CCAATGAAGAGAGAAAAGAG+AGG | + | chr1_2:4489614-4489633 | Msa0050570:intron | 40.0% | |
| CATCTGCTTTCAGAAAGACA+AGG | - | chr1_2:4489832-4489851 | None:intergenic | 40.0% | |
| CTACCCTCGTCTCTAAATAT+AGG | + | chr1_2:4489963-4489982 | Msa0050570:intron | 40.0% | |
| GGTCCTATATTTAGAGACGA+GGG | - | chr1_2:4489969-4489988 | None:intergenic | 40.0% | |
| AACACTAGACTGATTGGGTT+TGG | + | chr1_2:4490160-4490179 | Msa0050570:intron | 40.0% | |
| ACACTAGACTGATTGGGTTT+GGG | + | chr1_2:4490161-4490180 | Msa0050570:intron | 40.0% | |
| !! | TTCTTTGGCTTGTTGAAGTG+TGG | + | chr1_2:4490280-4490299 | Msa0050570:intron | 40.0% |
| CTTGTTGAAGTGTGGTATTG+TGG | + | chr1_2:4490288-4490307 | Msa0050570:intron | 40.0% | |
| ! | TTTAAGAGAGAGTGTGAGAG+AGG | + | chr1_2:4490511-4490530 | Msa0050570:intron | 40.0% |
| ACAGTGAACCTAAGCATGAT+TGG | + | chr1_2:4490930-4490949 | Msa0050570:CDS | 40.0% | |
| ! | CTCACACAGTTGATGTTGAT+GGG | + | chr1_2:4491175-4491194 | Msa0050570:CDS | 40.0% |
| CCAGGAATATCAGGAATGAA+GGG | - | chr1_2:4491246-4491265 | None:intergenic | 40.0% | |
| TCCAGGAATATCAGGAATGA+AGG | - | chr1_2:4491247-4491266 | None:intergenic | 40.0% | |
| CATTCCTGATATTCCTGGAA+AGG | + | chr1_2:4491248-4491267 | Msa0050570:CDS | 40.0% | |
| !! | GCAATCTTCTCAGGTTTTGA+TGG | - | chr1_2:4491309-4491328 | None:intergenic | 40.0% |
| AGAAGATTGCCATTGTTGGT+GGG | + | chr1_2:4491319-4491338 | Msa0050570:CDS | 40.0% | |
| AAAGATACCAGCAAACTCCA+AGG | - | chr1_2:4491355-4491374 | None:intergenic | 40.0% | |
| TTTGCGAGGATTTGATGAAG+AGG | + | chr1_2:4491422-4491441 | Msa0050570:CDS | 40.0% | |
| !! | GCAGAAAATATGGCTCTAAG+AGG | + | chr1_2:4491546-4491565 | Msa0050570:CDS | 40.0% |
| ATCTCCTGTAGCTATCACTA+AGG | + | chr1_2:4491590-4491609 | Msa0050570:CDS | 40.0% | |
| ! | CTCTCTTTAAAGACCAGCAA+AGG | + | chr1_2:4491627-4491646 | Msa0050570:CDS | 40.0% |
| AGGACGCAAACCTAATACTA+AGG | + | chr1_2:4491686-4491705 | Msa0050570:CDS | 40.0% | |
| AATATTAAGCAAGGGGCTGA+AGG | - | chr1_2:4492055-4492074 | None:intergenic | 40.0% | |
| ATTGAACTCCAGTGTCCTTA+AGG | + | chr1_2:4492136-4492155 | Msa0050570:intron | 40.0% | |
| TTGAACTCCAGTGTCCTTAA+GGG | + | chr1_2:4492137-4492156 | Msa0050570:intron | 40.0% | |
| ! | TTCACTGCAGAATTTAGGAC+TGG | + | chr1_2:4492321-4492340 | Msa0050570:intron | 40.0% |
| ! | AATTTAGGACTGGAGTCTGT+TGG | + | chr1_2:4492331-4492350 | Msa0050570:CDS | 40.0% |
| GGTGTGAAGATTGCTAAAGA+TGG | + | chr1_2:4492352-4492371 | Msa0050570:CDS | 40.0% | |
| ATTCATCAACCTGGGTGAAT+AGG | - | chr1_2:4492457-4492476 | None:intergenic | 40.0% | |
| GTTCCTTCAATTTGGGCAAT+CGG | + | chr1_2:4492491-4492510 | Msa0050570:CDS | 40.0% | |
| GATGATATACAACCACACAC+TGG | - | chr1_2:4492678-4492697 | None:intergenic | 40.0% | |
| TGACACGAATTTGTATGGTG+AGG | + | chr1_2:4492885-4492904 | Msa0050570:intron | 40.0% | |
| ! | CATCATGACGAGAGCTTTAA+TGG | + | chr1_2:4492996-4493015 | Msa0050570:intron | 40.0% |
| CAGAAGATCATTGATCTCGA+TGG | - | chr1_2:4493411-4493430 | None:intergenic | 40.0% | |
| ! | AGCAAATTTTAGGCCACTGA+AGG | + | chr1_2:4493523-4493542 | Msa0050570:CDS | 40.0% |
| AGTTTCATAAAAACCCGGTC+TGG | - | chr1_2:4493566-4493585 | None:intergenic | 40.0% | |
| CTCTTTCGAATCTTCCTAGT+GGG | - | chr1_2:4493848-4493867 | None:intergenic | 40.0% | |
| AAGATATCAACGGAAGACAC+TGG | - | chr1_2:4493903-4493922 | None:intergenic | 40.0% | |
| TAGTATGCTGAACAGAATGC+AGG | - | chr1_2:4493939-4493958 | None:intergenic | 40.0% | |
| ATTGCTAGACTTCTTCGTGA+GGG | - | chr1_2:4494133-4494152 | None:intergenic | 40.0% | |
| TATTGCTAGACTTCTTCGTG+AGG | - | chr1_2:4494134-4494153 | None:intergenic | 40.0% | |
| TGGTTCTCTTAGCATGCTAT+TGG | + | chr1_2:4494299-4494318 | Msa0050570:intron | 40.0% | |
| ! | ACAGCTTTTGCTTCATTGTC+TGG | - | chr1_2:4494381-4494400 | None:intergenic | 40.0% |
| AATGAAGCAAAAGCTGTAGC+CGG | + | chr1_2:4494384-4494403 | Msa0050570:CDS | 40.0% | |
| TCATCCTTACCTTAAGGCAT+CGG | - | chr1_2:4494457-4494476 | None:intergenic | 40.0% | |
| CATTCGTCATGAACCATCAA+TGG | - | chr1_2:4494724-4494743 | None:intergenic | 40.0% | |
| ! | TTGATGGTTCATGACGAATG+TGG | + | chr1_2:4494724-4494743 | Msa0050570:intron | 40.0% |
| TGATGGTTCATGACGAATGT+GGG | + | chr1_2:4494725-4494744 | Msa0050570:intron | 40.0% | |
| ATCTTGTGGGAAGCAAGTTT+AGG | + | chr1_2:4494807-4494826 | Msa0050570:intron | 40.0% | |
| TCTTGTGGGAAGCAAGTTTA+GGG | + | chr1_2:4494808-4494827 | Msa0050570:intron | 40.0% | |
| ! | AGCAAGTTTAGGGTCTGTAA+AGG | + | chr1_2:4494818-4494837 | Msa0050570:intron | 40.0% |
| !! | GATTAAGTTGGTTCAGCATG+TGG | + | chr1_2:4494946-4494965 | Msa0050570:intron | 40.0% |
| TTAGGAAAAGGGGAATTTGG+GGG | + | chr1_2:4494975-4494994 | Msa0050570:intron | 40.0% | |
| CATATTGCCGCTATAACACA+TGG | - | chr1_2:4495099-4495118 | None:intergenic | 40.0% | |
| AAGAAACTCCCAACCCAAAA+TGG | + | chr1_2:4495287-4495306 | Msa0050570:intron | 40.0% | |
| GTAAGGATACAAGAGACTAC+AGG | - | chr1_2:4495335-4495354 | None:intergenic | 40.0% | |
| ! | GGAAACATGTTGCATTGGTA+AGG | - | chr1_2:4495352-4495371 | None:intergenic | 40.0% |
| ! | GAAAAGGGGGAATGGAATTT+TGG | + | chr1_2:4495555-4495574 | Msa0050570:three_prime_UTR | 40.0% |
| ATCCTGCACAAAATAGGATG+GGG | + | chr1_2:4495795-4495814 | Msa0050570:three_prime_UTR | 40.0% | |
| ACCAATGAAGCAAGCAGCAA+TGG | + | chr1_2:4488877-4488896 | Msa0050570:exon | 45.0% | |
| GTAAGGGAGAAGAACAAGAG+AGG | - | chr1_2:4488916-4488935 | None:intergenic | 45.0% | |
| !! | GAGAGTGTTTCGGGTAAGTA+AGG | - | chr1_2:4488933-4488952 | None:intergenic | 45.0% |
| !! | GGTGAAGAAGAGAGTGTTTC+GGG | - | chr1_2:4488942-4488961 | None:intergenic | 45.0% |
| ! | GCGAGAAAATGGGAAGGTTT+TGG | - | chr1_2:4488963-4488982 | None:intergenic | 45.0% |
| GAGTGAAGGAGCGAGAAAAT+GGG | - | chr1_2:4488973-4488992 | None:intergenic | 45.0% | |
| AGAGTGAAGGAGCGAGAAAA+TGG | - | chr1_2:4488974-4488993 | None:intergenic | 45.0% | |
| TGAAGAGGTCGAAGTCATAG+TGG | - | chr1_2:4489096-4489115 | None:intergenic | 45.0% | |
| AGCAGCGTTAGCACCAAAAT+TGG | - | chr1_2:4489164-4489183 | None:intergenic | 45.0% | |
| TCCGTTCTCCACTATCTCAT+CGG | + | chr1_2:4489195-4489214 | Msa0050570:CDS | 45.0% | |
| !! | TCCGATGAGATAGTGGAGAA+CGG | - | chr1_2:4489199-4489218 | None:intergenic | 45.0% |
| ACTATCTCATCGGATACCAC+CGG | + | chr1_2:4489205-4489224 | Msa0050570:CDS | 45.0% | |
| GAAACCCTAAGCTATGGAAG+AGG | - | chr1_2:4489253-4489272 | None:intergenic | 45.0% | |
| GGGTCCTATATTTAGAGACG+AGG | - | chr1_2:4489970-4489989 | None:intergenic | 45.0% | |
| CACTAGACTGATTGGGTTTG+GGG | + | chr1_2:4490162-4490181 | Msa0050570:intron | 45.0% | |
| ! | GTATCTAAAACCAGGGAAGC+CGG | + | chr1_2:4490433-4490452 | Msa0050570:intron | 45.0% |
| ATTAACCACGTATTTGGGCG+TGG | - | chr1_2:4490647-4490666 | None:intergenic | 45.0% | |
| TTGTGCAGCTGTGTAATACG+TGG | + | chr1_2:4490824-4490843 | Msa0050570:intron | 45.0% | |
| AGAATCATCCCACCTTTCCA+CGG | - | chr1_2:4491051-4491070 | None:intergenic | 45.0% | |
| GGAAAGGTGGGATGATTCTT+TGG | + | chr1_2:4491052-4491071 | Msa0050570:intron | 45.0% | |
| CCATCAACATCAACTGTGTG+AGG | - | chr1_2:4491177-4491196 | None:intergenic | 45.0% | |
| ! | CCTCACACAGTTGATGTTGA+TGG | + | chr1_2:4491174-4491193 | Msa0050570:CDS | 45.0% |
| CCCTTCATTCCTGATATTCC+TGG | + | chr1_2:4491243-4491262 | Msa0050570:CDS | 45.0% | |
| CCAACAATGGCAATCTTCTC+AGG | - | chr1_2:4491318-4491337 | None:intergenic | 45.0% | |
| CCTGAGAAGATTGCCATTGT+TGG | + | chr1_2:4491315-4491334 | Msa0050570:CDS | 45.0% | |
| GAGAAGATTGCCATTGTTGG+TGG | + | chr1_2:4491318-4491337 | Msa0050570:CDS | 45.0% | |
| GAAGATTGCCATTGTTGGTG+GGG | + | chr1_2:4491320-4491339 | Msa0050570:CDS | 45.0% | |
| ! | AAGATTGCCATTGTTGGTGG+GGG | + | chr1_2:4491321-4491340 | Msa0050570:CDS | 45.0% |
| AATGTAACCCCCACCAACAA+TGG | - | chr1_2:4491331-4491350 | None:intergenic | 45.0% | |
| TACATTGCCTTGGAGTTTGC+TGG | + | chr1_2:4491345-4491364 | Msa0050570:CDS | 45.0% | |
| GATGAAGAGGTAAGCAAGCA+TGG | + | chr1_2:4491435-4491454 | Msa0050570:intron | 45.0% | |
| CTACAGGAGATTCCTCAGTA+TGG | - | chr1_2:4491581-4491600 | None:intergenic | 45.0% | |
| ! | TGAGCCAACTAAGAAGCATG+TGG | - | chr1_2:4492179-4492198 | None:intergenic | 45.0% |
| TCAAGAACATGCAAGCCGTA+TGG | - | chr1_2:4492206-4492225 | None:intergenic | 45.0% | |
| ! | AGTGTTACTCCTATTCACCC+AGG | + | chr1_2:4492445-4492464 | Msa0050570:intron | 45.0% |
| TCTCCGATTGCCCAAATTGA+AGG | - | chr1_2:4492497-4492516 | None:intergenic | 45.0% | |
| CAATCGGAGATGCTACAAAC+AGG | + | chr1_2:4492507-4492526 | Msa0050570:CDS | 45.0% | |
| ! | TCTCACTCCAGTTGCTTTGA+TGG | + | chr1_2:4492535-4492554 | Msa0050570:CDS | 45.0% |
| ! | ACTCCAGTTGCTTTGATGGA+GGG | + | chr1_2:4492539-4492558 | Msa0050570:CDS | 45.0% |
| GCACAGGCTGTAGAACAATA+TGG | + | chr1_2:4493482-4493501 | Msa0050570:intron | 45.0% | |
| TGATGCTCCTGAAATTGTGC+AGG | + | chr1_2:4493635-4493654 | Msa0050570:intron | 45.0% | |
| GCAGACTTTGATGCTACTGT+AGG | + | chr1_2:4493779-4493798 | Msa0050570:CDS | 45.0% | |
| GCTCTTTCGAATCTTCCTAG+TGG | - | chr1_2:4493849-4493868 | None:intergenic | 45.0% | |
| TCGAAAGAGCCTTGATTCAC+AGG | + | chr1_2:4493859-4493878 | Msa0050570:CDS | 45.0% | |
| AAGTAATCATGGCCTGCACA+GGG | - | chr1_2:4494070-4494089 | None:intergenic | 45.0% | |
| TGTGCAGGCCATGATTACTT+GGG | + | chr1_2:4494070-4494089 | Msa0050570:intron | 45.0% | |
| TAGACTTCTTCGTGAGGGAA+GGG | - | chr1_2:4494128-4494147 | None:intergenic | 45.0% | |
| AGAAACTTGCCGATGCCTTA+AGG | + | chr1_2:4494445-4494464 | Msa0050570:three_prime_UTR | 45.0% | |
| TAGGTTTAGGTGCTCTCTCT+TGG | + | chr1_2:4494574-4494593 | Msa0050570:intron | 45.0% | |
| TAGGAAAAGGGGAATTTGGG+GGG | + | chr1_2:4494976-4494995 | Msa0050570:intron | 45.0% | |
| GGAATTTGGGGGGTAGATTA+CGG | + | chr1_2:4494986-4495005 | Msa0050570:intron | 45.0% | |
| GAATTTGGGGGGTAGATTAC+GGG | + | chr1_2:4494987-4495006 | Msa0050570:intron | 45.0% | |
| GTAGATTACGGGTAACTGAG+AGG | + | chr1_2:4494998-4495017 | Msa0050570:intron | 45.0% | |
| !!! | CATTCCTGCCATTTTGGGTT+GGG | - | chr1_2:4495298-4495317 | None:intergenic | 45.0% |
| !!! | ACATTCCTGCCATTTTGGGT+TGG | - | chr1_2:4495299-4495318 | None:intergenic | 45.0% |
| TGTCTTGAAAGCTCAGTTGC+CGG | - | chr1_2:4495506-4495525 | None:intergenic | 45.0% | |
| GGGGTGAGCTCATTTGAAAA+GGG | + | chr1_2:4495540-4495559 | Msa0050570:three_prime_UTR | 45.0% | |
| GGGTGAGCTCATTTGAAAAG+GGG | + | chr1_2:4495541-4495560 | Msa0050570:three_prime_UTR | 45.0% | |
| GGTGAGCTCATTTGAAAAGG+GGG | + | chr1_2:4495542-4495561 | Msa0050570:three_prime_UTR | 45.0% | |
| GCTCATTTGAAAAGGGGGAA+TGG | + | chr1_2:4495547-4495566 | Msa0050570:three_prime_UTR | 45.0% | |
| ! | TACCCCATCCTATTTTGTGC+AGG | - | chr1_2:4495800-4495819 | None:intergenic | 45.0% |
| !! | AATAGTTTAAAAAAAAAAAA+TGG | - | chr1_2:4492920-4492939 | None:intergenic | 5.0% |
| !! | AGAAAAAAAATTAAAAAAAA+TGG | - | chr1_2:4494699-4494718 | None:intergenic | 5.0% |
| !!! | TTTAATTTTATATCATTTTT+TGG | - | chr1_2:4495132-4495151 | None:intergenic | 5.0% |
| ! | GCCATTGCTGCTTGCTTCAT+TGG | - | chr1_2:4488881-4488900 | None:intergenic | 50.0% |
| GAAGGAGCGAGAAAATGGGA+AGG | - | chr1_2:4488969-4488988 | None:intergenic | 50.0% | |
| ! | GAGAGAAGGTGTGAGAGTGA+AGG | - | chr1_2:4488987-4489006 | None:intergenic | 50.0% |
| !! | AGGGTTTTGGTGGAGAGAGA+AGG | - | chr1_2:4489001-4489020 | None:intergenic | 50.0% |
| GGGAGGGGATTGAGAGATTA+GGG | - | chr1_2:4489020-4489039 | None:intergenic | 50.0% | |
| !! | TCGAAGTCATAGTGGATGGC+GGG | - | chr1_2:4489088-4489107 | None:intergenic | 50.0% |
| !! | GTCGAAGTCATAGTGGATGG+CGG | - | chr1_2:4489089-4489108 | None:intergenic | 50.0% |
| ! | GAGGTCGAAGTCATAGTGGA+TGG | - | chr1_2:4489092-4489111 | None:intergenic | 50.0% |
| GACTTCGACCTCTTCACCAT+CGG | + | chr1_2:4489100-4489119 | Msa0050570:CDS | 50.0% | |
| TGGAAGCAAAGCGTGAAGCA+CGG | - | chr1_2:4489144-4489163 | None:intergenic | 50.0% | |
| GGTGGTATCCGATGAGATAG+TGG | - | chr1_2:4489206-4489225 | None:intergenic | 50.0% | |
| ! | AGGAGTGGGTTTACTGAGTC+AGG | + | chr1_2:4490350-4490369 | Msa0050570:intron | 50.0% |
| GAAGCCGGTTATCCCGTATT+TGG | + | chr1_2:4490448-4490467 | Msa0050570:intron | 50.0% | |
| GTTAACCACGCCCAAATACG+TGG | + | chr1_2:4490639-4490658 | Msa0050570:intron | 50.0% | |
| !! | GTCAAGTTGATTGAAGGCCG+TGG | + | chr1_2:4491031-4491050 | Msa0050570:CDS | 50.0% |
| GTTGATTGAAGGCCGTGGAA+AGG | + | chr1_2:4491036-4491055 | Msa0050570:CDS | 50.0% | |
| ATTGAAGGCCGTGGAAAGGT+GGG | + | chr1_2:4491040-4491059 | Msa0050570:intron | 50.0% | |
| ! | CGACAAAAGCAGGTTTTGCG+AGG | + | chr1_2:4491408-4491427 | Msa0050570:CDS | 50.0% |
| GCTGCCTTAGTGATAGCTAC+AGG | - | chr1_2:4491597-4491616 | None:intergenic | 50.0% | |
| GCTATCACTAAGGCAGCTGA+TGG | + | chr1_2:4491600-4491619 | Msa0050570:CDS | 50.0% | |
| !! | AAAGACCAGCAAAGGTACCG+TGG | + | chr1_2:4491635-4491654 | Msa0050570:CDS | 50.0% |
| ACTCCAGTGTCCTTAAGGGT+TGG | + | chr1_2:4492141-4492160 | Msa0050570:intron | 50.0% | |
| TAGCCAACCCTTAAGGACAC+TGG | - | chr1_2:4492147-4492166 | None:intergenic | 50.0% | |
| ! | CACTCCAGTTGCTTTGATGG+AGG | + | chr1_2:4492538-4492557 | Msa0050570:CDS | 50.0% |
| ACTCCCTCCATCAAAGCAAC+TGG | - | chr1_2:4492545-4492564 | None:intergenic | 50.0% | |
| ! | AGTTGCTTTGATGGAGGGAG+TGG | + | chr1_2:4492544-4492563 | Msa0050570:CDS | 50.0% |
| TGACTTCAGTGACCAGTGTG+TGG | + | chr1_2:4492663-4492682 | Msa0050570:intron | 50.0% | |
| !! | TGTGTGATCAAGCTTGCTGC+CGG | + | chr1_2:4493097-4493116 | Msa0050570:intron | 50.0% |
| GCAGCAACTACAACAACCAC+CGG | - | chr1_2:4493119-4493138 | None:intergenic | 50.0% | |
| TGTGTTCTCCCACCACCAAT+TGG | + | chr1_2:4493335-4493354 | Msa0050570:CDS | 50.0% | |
| ! | CAACTCCTCCAATTGGTGGT+GGG | - | chr1_2:4493346-4493365 | None:intergenic | 50.0% |
| AGACCAACTCCTCCAATTGG+TGG | - | chr1_2:4493350-4493369 | None:intergenic | 50.0% | |
| GTGAGACCAACTCCTCCAAT+TGG | - | chr1_2:4493353-4493372 | None:intergenic | 50.0% | |
| AGGAGCAGGTGAATGACCTA+TGG | + | chr1_2:4493375-4493394 | Msa0050570:intron | 50.0% | |
| ! | CGATGGATTTAGCCTGCCAT+AGG | - | chr1_2:4493394-4493413 | None:intergenic | 50.0% |
| ! | GTTCTGGGTTTGCACATGTG+TGG | + | chr1_2:4493611-4493630 | Msa0050570:intron | 50.0% |
| CTGAGGAGTTTGTCACCATG+AGG | + | chr1_2:4493819-4493838 | Msa0050570:CDS | 50.0% | |
| CAAGTAATCATGGCCTGCAC+AGG | - | chr1_2:4494071-4494090 | None:intergenic | 50.0% | |
| CTGTGCAGGCCATGATTACT+TGG | + | chr1_2:4494069-4494088 | Msa0050570:intron | 50.0% | |
| AGACTTCTTCGTGAGGGAAG+GGG | - | chr1_2:4494127-4494146 | None:intergenic | 50.0% | |
| CTAGACTTCTTCGTGAGGGA+AGG | - | chr1_2:4494129-4494148 | None:intergenic | 50.0% | |
| !! | AAGGCATCGGCAAGTTTCTC+TGG | - | chr1_2:4494444-4494463 | None:intergenic | 50.0% |
| CTTGCCGATGCCTTAAGGTA+AGG | + | chr1_2:4494450-4494469 | Msa0050570:intron | 50.0% | |
| AACTCCCAACCCAAAATGGC+AGG | + | chr1_2:4495291-4495310 | Msa0050570:intron | 50.0% | |
| ACGCCGGAAACATGTTGCAT+TGG | - | chr1_2:4495357-4495376 | None:intergenic | 50.0% | |
| CGGGGTGAGCTCATTTGAAA+AGG | + | chr1_2:4495539-4495558 | Msa0050570:three_prime_UTR | 50.0% | |
| GTTGGAGTTGAGACACAGCA+TGG | + | chr1_2:4495704-4495723 | Msa0050570:three_prime_UTR | 50.0% | |
| GGGGAGGGGATTGAGAGATT+AGG | - | chr1_2:4489021-4489040 | None:intergenic | 55.0% | |
| GTCCGCGCTGAATCGCAAAA+CGG | + | chr1_2:4489055-4489074 | Msa0050570:CDS | 55.0% | |
| !! | CGAAGTCATAGTGGATGGCG+GGG | - | chr1_2:4489087-4489106 | None:intergenic | 55.0% |
| ATCTCATCGGATACCACCGG+AGG | + | chr1_2:4489208-4489227 | Msa0050570:CDS | 55.0% | |
| GCTGAGTTGCAGAGGCTTAC+TGG | + | chr1_2:4490977-4490996 | Msa0050570:CDS | 55.0% | |
| GATTGAAGGCCGTGGAAAGG+TGG | + | chr1_2:4491039-4491058 | Msa0050570:intron | 55.0% | |
| TGGTGGGGGTTACATTGCCT+TGG | + | chr1_2:4491335-4491354 | Msa0050570:CDS | 55.0% | |
| !! | ACCAGCAAAGGTACCGTGGA+TGG | + | chr1_2:4491639-4491658 | Msa0050570:CDS | 55.0% |
| ACCATCCACGGTACCTTTGC+TGG | - | chr1_2:4491643-4491662 | None:intergenic | 55.0% | |
| GTTCTCCCACCACCAATTGG+AGG | + | chr1_2:4493338-4493357 | Msa0050570:CDS | 55.0% | |
| CCAACTCCTCCAATTGGTGG+TGG | - | chr1_2:4493347-4493366 | None:intergenic | 55.0% | |
| CCACCACCAATTGGAGGAGT+TGG | + | chr1_2:4493344-4493363 | Msa0050570:CDS | 55.0% | |
| ! | TGGAGGAGTTGGTCTCACAG+AGG | + | chr1_2:4493355-4493374 | Msa0050570:intron | 55.0% |
| ! | AGTTGGTCTCACAGAGGAGC+AGG | + | chr1_2:4493361-4493380 | Msa0050570:intron | 55.0% |
| GCAGGTGAATGACCTATGGC+AGG | + | chr1_2:4493379-4493398 | Msa0050570:intron | 55.0% | |
| CAAACTCCTCAGCTGCGGTT+GGG | - | chr1_2:4493811-4493830 | None:intergenic | 55.0% | |
| ACAAACTCCTCAGCTGCGGT+TGG | - | chr1_2:4493812-4493831 | None:intergenic | 55.0% | |
| GGTGACAAACTCCTCAGCTG+CGG | - | chr1_2:4493816-4493835 | None:intergenic | 55.0% | |
| TCACCATGAGGACTCCCACT+AGG | + | chr1_2:4493831-4493850 | Msa0050570:CDS | 55.0% | |
| CTTCCTAGTGGGAGTCCTCA+TGG | - | chr1_2:4493837-4493856 | None:intergenic | 55.0% | |
| GACTTCTTCGTGAGGGAAGG+GGG | - | chr1_2:4494126-4494145 | None:intergenic | 55.0% | |
| GCTCGCACGCACGCTACATT+TGG | - | chr1_2:4488738-4488757 | None:intergenic | 60.0% | |
| !! | CGCCGTTTTGCGATTCAGCG+CGG | - | chr1_2:4489060-4489079 | None:intergenic | 60.0% |
| !! | TACCAGCGCCGATGGTGAAG+AGG | - | chr1_2:4489111-4489130 | None:intergenic | 60.0% |
| !! | TTCACCATCGGCGCTGGTAG+TGG | + | chr1_2:4489112-4489131 | Msa0050570:CDS | 60.0% |
| ! | TCGGATACCACCGGAGGTGT+CGG | + | chr1_2:4489214-4489233 | Msa0050570:CDS | 60.0% |
| ! | TACGGGATAACCGGCTTCCC+TGG | - | chr1_2:4490446-4490465 | None:intergenic | 60.0% |
| !! | GTGATCAAGCTTGCTGCCGG+TGG | + | chr1_2:4493100-4493119 | Msa0050570:intron | 60.0% |
| TGGTGGGAGAACACAGCAGC+AGG | - | chr1_2:4493330-4493349 | None:intergenic | 60.0% | |
| CACTGAAGGCCACCCTCTCT+GGG | + | chr1_2:4493537-4493556 | Msa0050570:CDS | 60.0% | |
| CATTCACCCAACCGCAGCTG+AGG | + | chr1_2:4493802-4493821 | Msa0050570:CDS | 60.0% | |
| CGATTCAGCGCGGACAGCGA+AGG | - | chr1_2:4489050-4489069 | None:intergenic | 65.0% | |
| GACCTCTTCACCATCGGCGC+TGG | + | chr1_2:4489106-4489125 | Msa0050570:CDS | 65.0% | |
| !! | ACCATCGGCGCTGGTAGTGG+CGG | + | chr1_2:4489115-4489134 | Msa0050570:CDS | 65.0% |
| !! | GATACCACCGGAGGTGTCGG+CGG | + | chr1_2:4489217-4489236 | Msa0050570:CDS | 65.0% |
| TTACGTGCCGCCGACACCTC+CGG | - | chr1_2:4489227-4489246 | None:intergenic | 65.0% | |
| CCAGAGAGGGTGGCCTTCAG+TGG | - | chr1_2:4493539-4493558 | None:intergenic | 65.0% | |
| CCACTGAAGGCCACCCTCTC+TGG | + | chr1_2:4493536-4493555 | Msa0050570:CDS | 65.0% | |
| GTCTGGAAGCCCAGAGAGGG+TGG | - | chr1_2:4493549-4493568 | None:intergenic | 65.0% | |
| CCGGTCTGGAAGCCCAGAGA+GGG | - | chr1_2:4493552-4493571 | None:intergenic | 65.0% | |
| CCCTCTCTGGGCTTCCAGAC+CGG | + | chr1_2:4493549-4493568 | Msa0050570:CDS | 65.0% | |
| CCTCTCTGGGCTTCCAGACC+GGG | + | chr1_2:4493550-4493569 | Msa0050570:CDS | 65.0% | |
| TGAGGGAAGGGGGTGACAGC+AGG | - | chr1_2:4494116-4494135 | None:intergenic | 65.0% | |
| CAGCGCGGACAGCGAAGGTG+CGG | - | chr1_2:4489045-4489064 | None:intergenic | 70.0% | |
| ! | ACCGCCACTACCAGCGCCGA+TGG | - | chr1_2:4489119-4489138 | None:intergenic | 70.0% |
| CCCGGTCTGGAAGCCCAGAG+AGG | - | chr1_2:4493553-4493572 | None:intergenic | 70.0% | |
| ! | AGCGAAGGTGCGGCGGGGAG+GGG | - | chr1_2:4489035-4489054 | None:intergenic | 75.0% |
| ! | CAGCGAAGGTGCGGCGGGGA+GGG | - | chr1_2:4489036-4489055 | None:intergenic | 75.0% |
| ! | ACAGCGAAGGTGCGGCGGGG+AGG | - | chr1_2:4489037-4489056 | None:intergenic | 75.0% |
| ! | CGGACAGCGAAGGTGCGGCG+GGG | - | chr1_2:4489040-4489059 | None:intergenic | 75.0% |
| ! | GCGGACAGCGAAGGTGCGGC+GGG | - | chr1_2:4489041-4489060 | None:intergenic | 75.0% |
| ! | CGCGGACAGCGAAGGTGCGG+CGG | - | chr1_2:4489042-4489061 | None:intergenic | 75.0% |
| ! | CGTGCCGCCGACACCTCCGG+TGG | - | chr1_2:4489224-4489243 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 4488719 | 4495847 | 4488719 | ID=Msa0050570;Name=Msa0050570 |
| chr1_2 | mRNA | 4488719 | 4495847 | 4488719 | ID=Msa0050570-mRNA-1;Parent=Msa0050570;Name=Msa0050570-mRNA-1;_AED=0.11;_eAED=0.11;_QI=162|0.7|0.72|1|0.9|0.81|11|419|493 |
| chr1_2 | exon | 4488719 | 4489242 | 4488719 | ID=Msa0050570-mRNA-1:exon:1182;Parent=Msa0050570-mRNA-1 |
| chr1_2 | exon | 4490907 | 4491057 | 4490907 | ID=Msa0050570-mRNA-1:exon:1183;Parent=Msa0050570-mRNA-1 |
| chr1_2 | exon | 4491165 | 4491443 | 4491165 | ID=Msa0050570-mRNA-1:exon:1184;Parent=Msa0050570-mRNA-1 |
| chr1_2 | exon | 4491531 | 4491707 | 4491531 | ID=Msa0050570-mRNA-1:exon:1185;Parent=Msa0050570-mRNA-1 |
| chr1_2 | exon | 4492331 | 4492384 | 4492331 | ID=Msa0050570-mRNA-1:exon:1186;Parent=Msa0050570-mRNA-1 |
| chr1_2 | exon | 4492467 | 4492615 | 4492467 | ID=Msa0050570-mRNA-1:exon:1187;Parent=Msa0050570-mRNA-1 |
| chr1_2 | exon | 4493320 | 4493365 | 4493320 | ID=Msa0050570-mRNA-1:exon:1188;Parent=Msa0050570-mRNA-1 |
| chr1_2 | exon | 4493488 | 4493571 | 4493488 | ID=Msa0050570-mRNA-1:exon:1189;Parent=Msa0050570-mRNA-1 |
| chr1_2 | exon | 4493743 | 4493880 | 4493743 | ID=Msa0050570-mRNA-1:exon:1190;Parent=Msa0050570-mRNA-1 |
| chr1_2 | exon | 4494372 | 4494466 | 4494372 | ID=Msa0050570-mRNA-1:exon:1191;Parent=Msa0050570-mRNA-1 |
| chr1_2 | exon | 4495482 | 4495847 | 4495482 | ID=Msa0050570-mRNA-1:exon:1192;Parent=Msa0050570-mRNA-1 |
| chr1_2 | five_prime_UTR | 4488719 | 4488880 | 4488719 | ID=Msa0050570-mRNA-1:five_prime_utr;Parent=Msa0050570-mRNA-1 |
| chr1_2 | CDS | 4488881 | 4489242 | 4488881 | ID=Msa0050570-mRNA-1:cds;Parent=Msa0050570-mRNA-1 |
| chr1_2 | CDS | 4490907 | 4491057 | 4490907 | ID=Msa0050570-mRNA-1:cds;Parent=Msa0050570-mRNA-1 |
| chr1_2 | CDS | 4491165 | 4491443 | 4491165 | ID=Msa0050570-mRNA-1:cds;Parent=Msa0050570-mRNA-1 |
| chr1_2 | CDS | 4491531 | 4491707 | 4491531 | ID=Msa0050570-mRNA-1:cds;Parent=Msa0050570-mRNA-1 |
| chr1_2 | CDS | 4492331 | 4492384 | 4492331 | ID=Msa0050570-mRNA-1:cds;Parent=Msa0050570-mRNA-1 |
| chr1_2 | CDS | 4492467 | 4492615 | 4492467 | ID=Msa0050570-mRNA-1:cds;Parent=Msa0050570-mRNA-1 |
| chr1_2 | CDS | 4493320 | 4493365 | 4493320 | ID=Msa0050570-mRNA-1:cds;Parent=Msa0050570-mRNA-1 |
| chr1_2 | CDS | 4493488 | 4493571 | 4493488 | ID=Msa0050570-mRNA-1:cds;Parent=Msa0050570-mRNA-1 |
| chr1_2 | CDS | 4493743 | 4493880 | 4493743 | ID=Msa0050570-mRNA-1:cds;Parent=Msa0050570-mRNA-1 |
| chr1_2 | CDS | 4494372 | 4494413 | 4494372 | ID=Msa0050570-mRNA-1:cds;Parent=Msa0050570-mRNA-1 |
| chr1_2 | three_prime_UTR | 4494414 | 4494466 | 4494414 | ID=Msa0050570-mRNA-1:three_prime_utr;Parent=Msa0050570-mRNA-1 |
| chr1_2 | three_prime_UTR | 4495482 | 4495847 | 4495482 | ID=Msa0050570-mRNA-1:three_prime_utr;Parent=Msa0050570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
