Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0084800 | XP_003591867.2 | 97.537 | 406 | 9 | 1 | 1 | 405 | 1 | 406 | 0.0 | 802 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0084800 | sp|A1L4Y1|GET3B_ARATH | 83.836 | 365 | 58 | 1 | 41 | 405 | 48 | 411 | 0.0 | 606 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0084800 | G7I505 | 97.537 | 406 | 9 | 1 | 1 | 405 | 1 | 406 | 0.0 | 802 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008850 | Msa0084800 | 0.802310 | 5.962182e-49 | -8.615850e-47 |
| Msa0011180 | Msa0084800 | 0.809656 | 1.698648e-50 | -8.615850e-47 |
| Msa0017120 | Msa0084800 | 0.809363 | 1.963766e-50 | -8.615850e-47 |
| Msa0017130 | Msa0084800 | 0.854782 | 9.785533e-62 | -8.615850e-47 |
| Msa0033590 | Msa0084800 | 0.840838 | 6.830185e-58 | -8.615850e-47 |
| Msa0034340 | Msa0084800 | 0.803989 | 2.678372e-49 | -8.615850e-47 |
| Msa0037820 | Msa0084800 | 0.808723 | 2.691635e-50 | -8.615850e-47 |
| Msa0040550 | Msa0084800 | -0.802161 | 6.397319e-49 | -8.615850e-47 |
| Msa0047470 | Msa0084800 | 0.836023 | 1.192707e-56 | -8.615850e-47 |
| Msa0050570 | Msa0084800 | 0.855204 | 7.380153e-62 | -8.615850e-47 |
| Msa0052550 | Msa0084800 | 0.811953 | 5.407907e-51 | -8.615850e-47 |
| Msa0056040 | Msa0084800 | 0.807758 | 4.322999e-50 | -8.615850e-47 |
| Msa0057740 | Msa0084800 | 0.800121 | 1.672300e-48 | -8.615850e-47 |
| Msa0059590 | Msa0084800 | 0.801461 | 8.907853e-49 | -8.615850e-47 |
| Msa0062750 | Msa0084800 | 0.827342 | 1.649407e-54 | -8.615850e-47 |
| Msa0065390 | Msa0084800 | 0.802349 | 5.853322e-49 | -8.615850e-47 |
| Msa0079250 | Msa0084800 | 0.818329 | 2.074509e-52 | -8.615850e-47 |
| Msa0083160 | Msa0084800 | 0.827868 | 1.233204e-54 | -8.615850e-47 |
| Msa0084800 | Msa0087110 | 0.804722 | 1.885115e-49 | -8.615850e-47 |
| Msa0084800 | Msa0089530 | 0.824036 | 1.003451e-53 | -8.615850e-47 |
| Msa0084800 | Msa0100250 | 0.809181 | 2.147865e-50 | -8.615850e-47 |
| Msa0084800 | Msa0103060 | 0.805006 | 1.643644e-49 | -8.615850e-47 |
| Msa0084800 | Msa0105210 | 0.804648 | 1.952478e-49 | -8.615850e-47 |
| Msa0084800 | Msa0110710 | 0.801036 | 1.088167e-48 | -8.615850e-47 |
| Msa0084800 | Msa0130800 | 0.831924 | 1.267110e-55 | -8.615850e-47 |
| Msa0084800 | Msa0130920 | 0.896720 | 2.814451e-76 | -8.615850e-47 |
| Msa0084800 | Msa0153640 | 0.829238 | 5.757776e-55 | -8.615850e-47 |
| Msa0084800 | Msa0164630 | 0.800860 | 1.182331e-48 | -8.615850e-47 |
| Msa0084800 | Msa0168900 | 0.838845 | 2.257603e-57 | -8.615850e-47 |
| Msa0084800 | Msa0171920 | 0.809337 | 1.988696e-50 | -8.615850e-47 |
| Msa0084800 | Msa0173760 | 0.801962 | 7.029324e-49 | -8.615850e-47 |
| Msa0084800 | Msa0178940 | 0.829118 | 6.156370e-55 | -8.615850e-47 |
| Msa0084800 | Msa0185390 | 0.815522 | 8.855800e-52 | -8.615850e-47 |
| Msa0084800 | Msa0206940 | 0.803985 | 2.684355e-49 | -8.615850e-47 |
| Msa0084800 | Msa0226800 | 0.805745 | 1.150584e-49 | -8.615850e-47 |
| Msa0084800 | Msa0250520 | 0.808758 | 2.645912e-50 | -8.615850e-47 |
| Msa0084800 | Msa0284870 | 0.803289 | 3.742200e-49 | -8.615850e-47 |
| Msa0084800 | Msa0323630 | 0.823338 | 1.461396e-53 | -8.615850e-47 |
| Msa0084800 | Msa0330370 | 0.802005 | 6.888313e-49 | -8.615850e-47 |
| Msa0084800 | Msa0334980 | 0.812352 | 4.426480e-51 | -8.615850e-47 |
| Msa0084800 | Msa0336270 | 0.806010 | 1.012338e-49 | -8.615850e-47 |
| Msa0084800 | Msa0349000 | 0.804295 | 2.313712e-49 | -8.615850e-47 |
| Msa0084800 | Msa0357380 | 0.802558 | 5.300455e-49 | -8.615850e-47 |
| Msa0084800 | Msa0369780 | 0.820366 | 7.123327e-53 | -8.615850e-47 |
| Msa0084800 | Msa0387790 | 0.840177 | 1.017125e-57 | -8.615850e-47 |
| Msa0084800 | Msa0421800 | 0.814819 | 1.268800e-51 | -8.615850e-47 |
| Msa0084800 | Msa0423110 | 0.837181 | 6.048600e-57 | -8.615850e-47 |
| Msa0084800 | Msa0423600 | 0.818981 | 1.475985e-52 | -8.615850e-47 |
| Msa0084800 | Msa0427050 | 0.803548 | 3.308136e-49 | -8.615850e-47 |
| Msa0084800 | Msa0463990 | 0.803240 | 3.830493e-49 | -8.615850e-47 |
| Msa0084800 | Msa0467800 | 0.800030 | 1.745124e-48 | -8.615850e-47 |
| Msa0084800 | Msa0467880 | 0.802648 | 5.077633e-49 | -8.615850e-47 |
| Msa0084800 | Msa0505660 | 0.816639 | 4.984834e-52 | -8.615850e-47 |
| Msa0084800 | Msa0509540 | 0.825558 | 4.389666e-54 | -8.615850e-47 |
| Msa0084800 | Msa0512310 | 0.831174 | 1.937903e-55 | -8.615850e-47 |
| Msa0084800 | Msa0514260 | 0.816285 | 5.984084e-52 | -8.615850e-47 |
| Msa0084800 | Msa0514990 | 0.839676 | 1.374272e-57 | -8.615850e-47 |
| Msa0084800 | Msa0530930 | 0.823301 | 1.491046e-53 | -8.615850e-47 |
| Msa0084800 | Msa0534420 | 0.811931 | 5.469891e-51 | -8.615850e-47 |
| Msa0084800 | Msa0540320 | 0.831352 | 1.752646e-55 | -8.615850e-47 |
| Msa0084800 | Msa0542040 | 0.805307 | 1.421855e-49 | -8.615850e-47 |
| Msa0084800 | Msa0577230 | 0.828260 | 9.924688e-55 | -8.615850e-47 |
| Msa0084800 | Msa0582110 | 0.821834 | 3.270118e-53 | -8.615850e-47 |
| Msa0084800 | Msa0587900 | 0.823829 | 1.121684e-53 | -8.615850e-47 |
| Msa0084800 | Msa0589290 | 0.806893 | 6.592320e-50 | -8.615850e-47 |
| Msa0084800 | Msa0596100 | 0.823614 | 1.260017e-53 | -8.615850e-47 |
| Msa0084800 | Msa0598250 | 0.826746 | 2.290811e-54 | -8.615850e-47 |
| Msa0084800 | Msa0600820 | 0.810919 | 9.072322e-51 | -8.615850e-47 |
| Msa0084800 | Msa0605230 | 0.863284 | 2.779311e-64 | -8.615850e-47 |
| Msa0084800 | Msa0606060 | 0.810399 | 1.175045e-50 | -8.615850e-47 |
| Msa0084800 | Msa0607300 | 0.808249 | 3.397928e-50 | -8.615850e-47 |
| Msa0084800 | Msa0622390 | 0.804341 | 2.262619e-49 | -8.615850e-47 |
| Msa0084800 | Msa0623270 | 0.804909 | 1.722408e-49 | -8.615850e-47 |
| Msa0084800 | Msa0624730 | 0.819134 | 1.362341e-52 | -8.615850e-47 |
| Msa0084800 | Msa0629500 | 0.802849 | 4.615750e-49 | -8.615850e-47 |
| Msa0084800 | Msa0645780 | 0.814025 | 1.900394e-51 | -8.615850e-47 |
| Msa0084800 | Msa0674220 | 0.826426 | 2.730482e-54 | -8.615850e-47 |
| Msa0084800 | Msa0674300 | 0.817121 | 3.885940e-52 | -8.615850e-47 |
| Msa0084800 | Msa0686610 | 0.820014 | 8.580202e-53 | -8.615850e-47 |
| Msa0084800 | Msa0690720 | 0.806075 | 9.807198e-50 | -8.615850e-47 |
| Msa0084800 | Msa0691100 | 0.800442 | 1.438623e-48 | -8.615850e-47 |
| Msa0084800 | Msa0698900 | 0.803613 | 3.206265e-49 | -8.615850e-47 |
| Msa0084800 | Msa0713550 | 0.807761 | 4.316466e-50 | -8.615850e-47 |
| Msa0084800 | Msa0726610 | 0.837341 | 5.505225e-57 | -8.615850e-47 |
| Msa0084800 | Msa0734760 | 0.834428 | 3.013782e-56 | -8.615850e-47 |
| Msa0084800 | Msa0735700 | 0.826975 | 2.019387e-54 | -8.615850e-47 |
| Msa0084800 | Msa0750380 | 0.819270 | 1.268576e-52 | -8.615850e-47 |
| Msa0084800 | Msa0763880 | 0.806564 | 7.736905e-50 | -8.615850e-47 |
| Msa0084800 | Msa0763910 | 0.820568 | 6.402586e-53 | -8.615850e-47 |
| Msa0084800 | Msa0770430 | 0.816796 | 4.598264e-52 | -8.615850e-47 |
| Msa0084800 | Msa0772150 | 0.801280 | 9.702097e-49 | -8.615850e-47 |
| Msa0084800 | Msa0778580 | 0.846037 | 2.793484e-59 | -8.615850e-47 |
| Msa0084800 | Msa0780140 | 0.823229 | 1.549746e-53 | -8.615850e-47 |
| Msa0084800 | Msa0789800 | 0.848255 | 6.884651e-60 | -8.615850e-47 |
| Msa0084800 | Msa0794460 | 0.828561 | 8.395990e-55 | -8.615850e-47 |
| Msa0084800 | Msa0795930 | 0.803837 | 2.880461e-49 | -8.615850e-47 |
| Msa0084800 | Msa0798950 | 0.837642 | 4.607988e-57 | -8.615850e-47 |
| Msa0084800 | Msa0811510 | 0.811161 | 8.040733e-51 | -8.615850e-47 |
| Msa0084800 | Msa0815950 | 0.809287 | 2.038520e-50 | -8.615850e-47 |
| Msa0084800 | Msa0822370 | 0.813197 | 2.891261e-51 | -8.615850e-47 |
| Msa0084800 | Msa0830720 | 0.831764 | 1.387314e-55 | -8.615850e-47 |
| Msa0084800 | Msa0844100 | 0.817673 | 2.919350e-52 | -8.615850e-47 |
| Msa0084800 | Msa0848380 | 0.805457 | 1.323010e-49 | -8.615850e-47 |
| Msa0084800 | Msa0851740 | 0.821001 | 5.092313e-53 | -8.615850e-47 |
| Msa0084800 | Msa0861560 | 0.823820 | 1.127203e-53 | -8.615850e-47 |
| Msa0084800 | Msa0863250 | 0.806882 | 6.627344e-50 | -8.615850e-47 |
| Msa0084800 | Msa0868040 | 0.827638 | 1.400950e-54 | -8.615850e-47 |
| Msa0084800 | Msa0934830 | 0.840302 | 9.437923e-58 | -8.615850e-47 |
| Msa0084800 | Msa0958020 | 0.803305 | 3.713781e-49 | -8.615850e-47 |
| Msa0084800 | Msa0964680 | 0.828007 | 1.142222e-54 | -8.615850e-47 |
| Msa0084800 | Msa0967670 | 0.800622 | 1.322019e-48 | -8.615850e-47 |
| Msa0084800 | Msa0971860 | 0.846627 | 1.928793e-59 | -8.615850e-47 |
| Msa0084800 | Msa0985430 | 0.821630 | 3.645798e-53 | -8.615850e-47 |
| Msa0084800 | Msa0986620 | 0.820897 | 5.381133e-53 | -8.615850e-47 |
| Msa0084800 | Msa1001780 | 0.800547 | 1.369605e-48 | -8.615850e-47 |
| Msa0084800 | Msa1010140 | 0.823953 | 1.049321e-53 | -8.615850e-47 |
| Msa0084800 | Msa1026720 | 0.822136 | 2.783168e-53 | -8.615850e-47 |
| Msa0084800 | Msa1029320 | 0.821021 | 5.037842e-53 | -8.615850e-47 |
| Msa0084800 | Msa1030430 | 0.849792 | 2.575685e-60 | -8.615850e-47 |
| Msa0084800 | Msa1038320 | 0.823921 | 1.067492e-53 | -8.615850e-47 |
| Msa0084800 | Msa1043870 | 0.819890 | 9.156511e-53 | -8.615850e-47 |
| Msa0084800 | Msa1076520 | 0.803150 | 3.998238e-49 | -8.615850e-47 |
| Msa0084800 | Msa1081700 | 0.814340 | 1.619470e-51 | -8.615850e-47 |
| Msa0084800 | Msa1097380 | 0.809495 | 1.839813e-50 | -8.615850e-47 |
| Msa0084800 | Msa1102180 | 0.830537 | 2.777894e-55 | -8.615850e-47 |
| Msa0084800 | Msa1119720 | 0.814659 | 1.376489e-51 | -8.615850e-47 |
| Msa0084800 | Msa1157920 | 0.809686 | 1.673427e-50 | -8.615850e-47 |
| Msa0084800 | Msa1181380 | 0.803067 | 4.161172e-49 | -8.615850e-47 |
| Msa0084800 | Msa1184580 | 0.804792 | 1.822589e-49 | -8.615850e-47 |
| Msa0084800 | Msa1198450 | 0.801203 | 1.006094e-48 | -8.615850e-47 |
| Msa0084800 | Msa1209790 | 0.804979 | 1.665346e-49 | -8.615850e-47 |
| Msa0084800 | Msa1220740 | 0.832355 | 9.912789e-56 | -8.615850e-47 |
| Msa0084800 | Msa1238700 | 0.821058 | 4.939540e-53 | -8.615850e-47 |
| Msa0084800 | Msa1252070 | 0.800127 | 1.667376e-48 | -8.615850e-47 |
| Msa0084800 | Msa1264560 | 0.811465 | 6.907751e-51 | -8.615850e-47 |
| Msa0084800 | Msa1272130 | 0.822323 | 2.519369e-53 | -8.615850e-47 |
| Msa0084800 | Msa1278420 | 0.803899 | 2.796601e-49 | -8.615850e-47 |
| Msa0084800 | Msa1284390 | 0.805624 | 1.220355e-49 | -8.615850e-47 |
| Msa0084800 | Msa1309100 | 0.820537 | 6.510832e-53 | -8.615850e-47 |
| Msa0084800 | Msa1322420 | 0.813868 | 2.058563e-51 | -8.615850e-47 |
| Msa0084800 | Msa1334650 | 0.835352 | 1.763801e-56 | -8.615850e-47 |
| Msa0084800 | Msa1335720 | 0.808190 | 3.498827e-50 | -8.615850e-47 |
| Msa0084800 | Msa1380720 | 0.813438 | 2.559065e-51 | -8.615850e-47 |
| Msa0084800 | Msa1381130 | 0.818660 | 1.746003e-52 | -8.615850e-47 |
| Msa0084800 | Msa1384980 | 0.801574 | 8.443823e-49 | -8.615850e-47 |
| Msa0084800 | Msa1388850 | 0.808341 | 3.248955e-50 | -8.615850e-47 |
| Msa0084800 | Msa1392680 | 0.802563 | 5.287468e-49 | -8.615850e-47 |
| Msa0084800 | Msa1395580 | 0.804292 | 2.316832e-49 | -8.615850e-47 |
| Msa0084800 | Msa1397540 | 0.814708 | 1.342814e-51 | -8.615850e-47 |
| Msa0084800 | Msa1412080 | 0.820326 | 7.276784e-53 | -8.615850e-47 |
| Msa0084800 | Msa1412520 | 0.800348 | 1.503526e-48 | -8.615850e-47 |
| Msa0084800 | Msa1418200 | 0.814417 | 1.557175e-51 | -8.615850e-47 |
| Msa0084800 | Msa1423190 | 0.814736 | 1.323298e-51 | -8.615850e-47 |
| Msa0084800 | Msa1432640 | 0.815774 | 7.781980e-52 | -8.615850e-47 |
| Msa0084800 | Msa1435470 | 0.802482 | 5.493701e-49 | -8.615850e-47 |
| Msa0084800 | Msa1440180 | 0.841636 | 4.214826e-58 | -8.615850e-47 |
| Msa0084800 | Msa1449740 | 0.839330 | 1.690718e-57 | -8.615850e-47 |
| Msa0084800 | Msa1456810 | 0.823435 | 1.387428e-53 | -8.615850e-47 |
| Msa0084800 | Msa1458920 | 0.800422 | 1.452285e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0084800 | MtrunA17_Chr1g0199481 | 97.537 | 406 | 9 | 1 | 1 | 405 | 1 | 406 | 0.0 | 802 |
| Msa0084800 | MtrunA17_Chr4g0028631 | 66.762 | 349 | 111 | 3 | 57 | 405 | 38 | 381 | 5.28e-174 | 491 |
| Msa0084800 | MtrunA17_Chr8g0350831 | 31.410 | 312 | 173 | 11 | 92 | 397 | 32 | 308 | 4.40e-35 | 132 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0084800 | AT3G10350.1 | 83.836 | 365 | 58 | 1 | 41 | 405 | 48 | 411 | 0.0 | 606 |
| Msa0084800 | AT3G10350.2 | 83.046 | 348 | 49 | 3 | 58 | 405 | 96 | 433 | 0.0 | 562 |
| Msa0084800 | AT5G60730.1 | 65.242 | 351 | 117 | 2 | 56 | 405 | 45 | 391 | 2.41e-150 | 431 |
| Msa0084800 | AT1G01910.1 | 32.588 | 313 | 168 | 10 | 92 | 397 | 31 | 307 | 9.38e-36 | 134 |
| Msa0084800 | AT1G01910.4 | 32.588 | 313 | 168 | 10 | 92 | 397 | 31 | 307 | 9.38e-36 | 134 |
| Msa0084800 | AT1G01910.2 | 32.588 | 313 | 168 | 10 | 92 | 397 | 31 | 307 | 9.38e-36 | 134 |
| Msa0084800 | AT1G01910.3 | 31.922 | 307 | 166 | 10 | 92 | 391 | 31 | 301 | 6.38e-34 | 128 |
| Msa0084800 | AT1G01910.5 | 33.520 | 179 | 108 | 4 | 225 | 397 | 30 | 203 | 5.28e-22 | 94.7 |
Find 129 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTCCTGCTCTCAAATTTC+TGG | 0.056203 | 1_2:-64431826 | Msa0084800:CDS |
| ATTGTCCTTGCCTGATTTCT+TGG | 0.156940 | 1_2:-64433115 | Msa0084800:CDS |
| AATTTCTGGGTGACATTATC+TGG | 0.197363 | 1_2:-64431812 | Msa0084800:CDS |
| CATATACAAGTTAGTTGATT+AGG | 0.201085 | 1_2:+64431428 | None:intergenic |
| TGTCCTGTGTGCTCTTGTTA+TGG | 0.247488 | 1_2:+64431560 | None:intergenic |
| GCTAAAACTGGGAGAGTTAC+TGG | 0.276118 | 1_2:-64433440 | Msa0084800:CDS |
| GTCCTGTGTGCTCTTGTTAT+GGG | 0.284709 | 1_2:+64431561 | None:intergenic |
| GCTGTTAAATTTGCAAATAA+TGG | 0.303414 | 1_2:-64434627 | Msa0084800:CDS |
| CTTCAATGAGGCACTCAATC+TGG | 0.311076 | 1_2:+64432219 | None:intergenic |
| CGAGATGTAGCTAAACAAAA+TGG | 0.323980 | 1_2:-64434191 | Msa0084800:CDS |
| ATATACAAGTTAGTTGATTA+GGG | 0.325610 | 1_2:+64431429 | None:intergenic |
| GAAAGGATTGAAAATGAATA+TGG | 0.328561 | 1_2:-64435635 | Msa0084800:exon |
| GGGTTTGACGACATGGTTGC+TGG | 0.331219 | 1_2:-64434720 | Msa0084800:CDS |
| GATGGTACAGGCTGACAAAT+TGG | 0.357327 | 1_2:-64432670 | Msa0084800:intron |
| TTCATGGATGGCATGGGTCT+TGG | 0.357627 | 1_2:-64434146 | Msa0084800:CDS |
| AAATCTTCCCTAGCCTTCTC+AGG | 0.365946 | 1_2:+64434215 | None:intergenic |
| AGGAGATGGGGTGGGATGGA+AGG | 0.368060 | 1_2:+64435549 | None:intergenic |
| TACAAATATACAGTGAAAAC+TGG | 0.368654 | 1_2:+64431335 | None:intergenic |
| TCAGCTCTCATTCCCACACT+TGG | 0.371045 | 1_2:-64431394 | Msa0084800:three_prime_UTR |
| GTTCCTGCTCTCAAATTTCT+GGG | 0.399883 | 1_2:-64431825 | Msa0084800:CDS |
| GTGAAAACTGGCATTTCATA+TGG | 0.400480 | 1_2:+64431347 | None:intergenic |
| TGGAAAGGAAAGAGAGGAGA+TGG | 0.408201 | 1_2:+64435535 | None:intergenic |
| TACTGGAGTCAAAGATTTCA+TGG | 0.409294 | 1_2:-64434162 | Msa0084800:CDS |
| CTGACAAATTGGAGAAGCTT+AGG | 0.410433 | 1_2:-64432659 | Msa0084800:CDS |
| AGAGAGGAGATGGGGTGGGA+TGG | 0.416140 | 1_2:+64435545 | None:intergenic |
| ATCGATAAGCTGGAGAGTTC+TGG | 0.417848 | 1_2:+64431885 | None:intergenic |
| AAAGTTAGGAGAGCTAAAAC+TGG | 0.426921 | 1_2:-64433452 | Msa0084800:intron |
| CCGTGGACGTATTTGAATCA+AGG | 0.428656 | 1_2:-64435722 | Msa0084800:five_prime_UTR |
| TCTGCAATTAAATCTGTGTT+CGG | 0.431700 | 1_2:-64432789 | Msa0084800:CDS |
| AAACAAAATGGTGGAAGTAC+TGG | 0.439810 | 1_2:-64434179 | Msa0084800:CDS |
| GCTCCTACAGAATCTATATC+CGG | 0.442766 | 1_2:-64434741 | Msa0084800:CDS |
| GAAGGAGAGAGCACCCTTGA+TGG | 0.444301 | 1_2:+64435567 | None:intergenic |
| CACTCGAATTGTATTTGATA+CGG | 0.446775 | 1_2:-64433246 | Msa0084800:CDS |
| ATGGATGCATCCAAGAAATC+AGG | 0.451659 | 1_2:+64433105 | None:intergenic |
| AGAGCGAAAAGTGGATAATC+AGG | 0.455173 | 1_2:+64434401 | None:intergenic |
| CTGCAATTAAATCTGTGTTC+GGG | 0.456881 | 1_2:-64432788 | Msa0084800:CDS |
| AGACTTGGTGGGTTGCTTAG+TGG | 0.463437 | 1_2:+64435480 | None:intergenic |
| CAGCTCTCATTCCCACACTT+GGG | 0.466183 | 1_2:-64431393 | Msa0084800:three_prime_UTR |
| GGAAAGGAAAGAGAGGAGAT+GGG | 0.467551 | 1_2:+64435536 | None:intergenic |
| ACTTTACTATAGGATTTGAC+AGG | 0.468530 | 1_2:-64434449 | Msa0084800:intron |
| TACAGTCAAGTGGTAGCTGC+TGG | 0.476587 | 1_2:-64431518 | Msa0084800:three_prime_UTR |
| ACATGCTAGGTGGGAAAGGA+GGG | 0.481081 | 1_2:-64434680 | Msa0084800:CDS |
| CAACATCAACAAGTGGTGCT+TGG | 0.486618 | 1_2:+64431859 | None:intergenic |
| AACAAGTTCAATGGCCATCA+AGG | 0.489310 | 1_2:-64435581 | Msa0084800:CDS |
| GGTTTGACGACATGGTTGCT+GGG | 0.490443 | 1_2:-64434719 | Msa0084800:CDS |
| AAACAAAGGAGGATGCTTTG+TGG | 0.493157 | 1_2:+64435515 | None:intergenic |
| GGAAAGAGAGGAGATGGGGT+GGG | 0.495047 | 1_2:+64435541 | None:intergenic |
| TATTACATGCTAGGTGGGAA+AGG | 0.499703 | 1_2:-64434684 | Msa0084800:CDS |
| TACCTTTAGTATCTTCCCGA+TGG | 0.504784 | 1_2:+64433086 | None:intergenic |
| AGATAAACCCTGAGAAGGCT+AGG | 0.504802 | 1_2:-64434223 | Msa0084800:CDS |
| TACATGCTAGGTGGGAAAGG+AGG | 0.505952 | 1_2:-64434681 | Msa0084800:CDS |
| GGATACACCTCCTCCTGGAC+TGG | 0.509204 | 1_2:-64433419 | Msa0084800:CDS |
| ATTTCTTGGATGCATCCATC+GGG | 0.509752 | 1_2:-64433101 | Msa0084800:CDS |
| TGCTTGGATCATCGATAAGC+TGG | 0.509888 | 1_2:+64431875 | None:intergenic |
| CTTGTTGATGTTGAGATAAG+AGG | 0.512017 | 1_2:-64431849 | Msa0084800:CDS |
| GTAAGAAAGAAAGAAAAGAA+AGG | 0.512073 | 1_2:-64435652 | Msa0084800:five_prime_UTR |
| CAAAGATTTCATGGATGGCA+TGG | 0.513368 | 1_2:-64434153 | Msa0084800:CDS |
| GATTTCTTGGATGCATCCAT+CGG | 0.513943 | 1_2:-64433102 | Msa0084800:CDS |
| CTAGGTGGGAAAGGAGGGGT+AGG | 0.517623 | 1_2:-64434675 | Msa0084800:CDS |
| TCTTGTGGTTTCCACTGATC+CGG | 0.524802 | 1_2:-64434595 | Msa0084800:CDS |
| AAGGAGGATGCTTTGTGGAA+AGG | 0.526775 | 1_2:+64435520 | None:intergenic |
| TATATCCGGGTTTGACGACA+TGG | 0.527034 | 1_2:-64434727 | Msa0084800:CDS |
| AGGAAAGAGAGGAGATGGGG+TGG | 0.527456 | 1_2:+64435540 | None:intergenic |
| GGAGCATTGGTACAGGTGGA+TGG | 0.530531 | 1_2:-64434425 | Msa0084800:CDS |
| GAGAGGAAGTATTACATGCT+AGG | 0.533273 | 1_2:-64434693 | Msa0084800:CDS |
| AACGCTTTCTTTCTTCAATG+AGG | 0.537410 | 1_2:+64432207 | None:intergenic |
| TGACAAATTGGAGAAGCTTA+GGG | 0.538635 | 1_2:-64432658 | Msa0084800:CDS |
| GAAAGGAAAGAGAGGAGATG+GGG | 0.544252 | 1_2:+64435537 | None:intergenic |
| AGCAACCATGTCGTCAAACC+CGG | 0.548690 | 1_2:+64434722 | None:intergenic |
| TCACCCAGAAATTTGAGAGC+AGG | 0.551277 | 1_2:+64431822 | None:intergenic |
| AAAACCTTGAAAAGACTTGG+TGG | 0.552040 | 1_2:+64435468 | None:intergenic |
| CGTGGACGTATTTGAATCAA+GGG | 0.552330 | 1_2:-64435721 | Msa0084800:five_prime_UTR |
| CAAAGAATGTGCCGGATCAG+TGG | 0.553787 | 1_2:+64434584 | None:intergenic |
| TCAGTGGAAACCACAAGAGT+GGG | 0.555064 | 1_2:+64434600 | None:intergenic |
| GGAAGTATTACATGCTAGGT+GGG | 0.558483 | 1_2:-64434689 | Msa0084800:CDS |
| TCTTGGAATGATAGTAGACC+AGG | 0.560237 | 1_2:-64434129 | Msa0084800:intron |
| AATAAGCAAAAGCCCAAGTG+TGG | 0.561040 | 1_2:+64431381 | None:intergenic |
| TAATGGACACCCCACTCTTG+TGG | 0.561615 | 1_2:-64434610 | Msa0084800:CDS |
| GAATCACTCAAAGAATGTGC+CGG | 0.561645 | 1_2:+64434576 | None:intergenic |
| ATCAGATTTATACAGTCAAG+TGG | 0.563363 | 1_2:-64431528 | Msa0084800:three_prime_UTR |
| TAGGTGGGAAAGGAGGGGTA+GGG | 0.563836 | 1_2:-64434674 | Msa0084800:CDS |
| CCTTGATTCAAATACGTCCA+CGG | 0.564975 | 1_2:+64435722 | None:intergenic |
| CTTACTTCAAGAGCGAAAAG+TGG | 0.566351 | 1_2:+64434392 | None:intergenic |
| TTACTGGATACACCTCCTCC+TGG | 0.568600 | 1_2:-64433424 | Msa0084800:CDS |
| TCTCCGCGTAACAAGTTCAA+TGG | 0.568859 | 1_2:-64435590 | Msa0084800:CDS |
| CTCCTACAGAATCTATATCC+GGG | 0.572305 | 1_2:-64434740 | Msa0084800:CDS |
| GCTTTGTGGAAAGGAAAGAG+AGG | 0.573915 | 1_2:+64435529 | None:intergenic |
| TGAAGCTATTGCGATTTCCA+AGG | 0.574785 | 1_2:-64433395 | Msa0084800:intron |
| ATCCATCGGGAAGATACTAA+AGG | 0.577762 | 1_2:-64433088 | Msa0084800:intron |
| GGAGTCAAAGATTTCATGGA+TGG | 0.578877 | 1_2:-64434158 | Msa0084800:CDS |
| AATCTTCCCTAGCCTTCTCA+GGG | 0.579005 | 1_2:+64434216 | None:intergenic |
| GCAATAGCTTCATCCAGTCC+AGG | 0.580425 | 1_2:+64433406 | None:intergenic |
| TTACTATAGGATTTGACAGG+GGG | 0.581858 | 1_2:-64434446 | Msa0084800:intron |
| AAACCTTGAAAAGACTTGGT+GGG | 0.584998 | 1_2:+64435469 | None:intergenic |
| CAAGAGCACACAGGACATGA+AGG | 0.585891 | 1_2:-64431554 | Msa0084800:three_prime_UTR |
| TTGCAATCAGATGCGGATGG+TGG | 0.586447 | 1_2:+64432151 | None:intergenic |
| ATCAGTGGAAACCACAAGAG+TGG | 0.590155 | 1_2:+64434599 | None:intergenic |
| AATTGGAGAAGCTTAGGGAG+AGG | 0.591225 | 1_2:-64432653 | Msa0084800:CDS |
| TTGACAATGAGTCTCTTCAC+AGG | 0.595374 | 1_2:+64432184 | None:intergenic |
| AAAGATTTCATGGATGGCAT+GGG | 0.595809 | 1_2:-64434152 | Msa0084800:CDS |
| GCTTCATCCAGTCCAGGAGG+AGG | 0.599686 | 1_2:+64433412 | None:intergenic |
| GATAAACCCTGAGAAGGCTA+GGG | 0.599812 | 1_2:-64434222 | Msa0084800:CDS |
| GATGTAGCTAAACAAAATGG+TGG | 0.601054 | 1_2:-64434188 | Msa0084800:CDS |
| ATTACAGATAAACCCTGAGA+AGG | 0.606217 | 1_2:-64434228 | Msa0084800:intron |
| TGTTATTGTTACAATCCCCA+CGG | 0.608154 | 1_2:-64432583 | Msa0084800:intron |
| CTTTACTATAGGATTTGACA+GGG | 0.609356 | 1_2:-64434448 | Msa0084800:intron |
| CATGCTAGGTGGGAAAGGAG+GGG | 0.610256 | 1_2:-64434679 | Msa0084800:CDS |
| CTTATCTCAACATCAACAAG+TGG | 0.612453 | 1_2:+64431852 | None:intergenic |
| ACAAGTTCAATGGCCATCAA+GGG | 0.614828 | 1_2:-64435580 | Msa0084800:CDS |
| AGGAAGTATTACATGCTAGG+TGG | 0.625352 | 1_2:-64434690 | Msa0084800:CDS |
| AGTCAAGTGGTAGCTGCTGG+AGG | 0.631627 | 1_2:-64431515 | Msa0084800:three_prime_UTR |
| TTTGTTGTCAGTGAGATCAG+TGG | 0.633537 | 1_2:-64434766 | Msa0084800:intron |
| GAACACAGATTTAATTGCAG+AGG | 0.636304 | 1_2:+64432791 | None:intergenic |
| TGCATCCAAGAAATCAGGCA+AGG | 0.637215 | 1_2:+64433110 | None:intergenic |
| ACATGGTTGCTGGGACTGAG+AGG | 0.644373 | 1_2:-64434710 | Msa0084800:CDS |
| ATAAGCAAAAGCCCAAGTGT+GGG | 0.649917 | 1_2:+64431382 | None:intergenic |
| AAGTTAGGAGAGCTAAAACT+GGG | 0.652686 | 1_2:-64433451 | Msa0084800:CDS |
| ACAAAACTTGCAATCAGATG+CGG | 0.652947 | 1_2:+64432144 | None:intergenic |
| GGAAGCGCGCAAAGAAACAA+AGG | 0.664583 | 1_2:+64435501 | None:intergenic |
| GGAGAGAAGAAGCATAAGAG+TGG | 0.665797 | 1_2:+64435608 | None:intergenic |
| AACCCGGATATAGATTCTGT+AGG | 0.666702 | 1_2:+64434738 | None:intergenic |
| TTTACTATAGGATTTGACAG+GGG | 0.676132 | 1_2:-64434447 | Msa0084800:intron |
| AACCCATAACAAGAGCACAC+AGG | 0.677515 | 1_2:-64431563 | Msa0084800:three_prime_UTR |
| CAGTGGAAACCACAAGAGTG+GGG | 0.682335 | 1_2:+64434601 | None:intergenic |
| AATCTTACAGCATCTTGACG+AGG | 0.694562 | 1_2:+64432756 | None:intergenic |
| TGGCCATTGAACTTGTTACG+CGG | 0.695577 | 1_2:+64435587 | None:intergenic |
| AACTTGCAATCAGATGCGGA+TGG | 0.702574 | 1_2:+64432148 | None:intergenic |
| AGCGCGCAAAGAAACAAAGG+AGG | 0.713068 | 1_2:+64435504 | None:intergenic |
| ATAGCTTCATCCAGTCCAGG+AGG | 0.738020 | 1_2:+64433409 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCTTTCTTTTTTATATTAAA+TGG | - | chr1_2:64431843-64431862 | Msa0084800:CDS | 10.0% |
| !!! | CTTTCTTTTTTATATTAAAT+GGG | - | chr1_2:64431844-64431863 | Msa0084800:CDS | 10.0% |
| !!! | TTTAGATAATTAGTTTAATT+TGG | - | chr1_2:64431882-64431901 | Msa0084800:CDS | 10.0% |
| !!! | ATTTTGAATCAATTAAATTA+AGG | + | chr1_2:64434016-64434035 | None:intergenic | 10.0% |
| !!! | CTTGTTATTAAATTGAATAT+TGG | - | chr1_2:64431652-64431671 | Msa0084800:intron | 15.0% |
| !! | CAATAACTAAATGAATTAAA+GGG | + | chr1_2:64431713-64431732 | None:intergenic | 15.0% |
| !! | CATAAAATTTAAATAGCTTA+AGG | + | chr1_2:64433447-64433466 | None:intergenic | 15.0% |
| !! | ATCAATTAAATTAAGGAATA+TGG | + | chr1_2:64434009-64434028 | None:intergenic | 15.0% |
| !!! | AAGTAAAAAAAAAGTGTTAA+GGG | + | chr1_2:64434131-64434150 | None:intergenic | 15.0% |
| !!! | GTTATTCAATTATTATTTCT+AGG | + | chr1_2:64434479-64434498 | None:intergenic | 15.0% |
| !!! | ATTTGATTTGAAGTATATTT+TGG | + | chr1_2:64435347-64435366 | None:intergenic | 15.0% |
| !! | TGTATTAAAAAAATACTTTC+TGG | + | chr1_2:64435544-64435563 | None:intergenic | 15.0% |
| !!! | TTTCTTTCTTTCTTACTTTT+TGG | + | chr1_2:64431375-64431394 | None:intergenic | 20.0% |
| !! | CCAATAACTAAATGAATTAA+AGG | + | chr1_2:64431714-64431733 | None:intergenic | 20.0% |
| !! | CCTTTAATTCATTTAGTTAT+TGG | - | chr1_2:64431711-64431730 | Msa0084800:intron | 20.0% |
| !! | ATTCATTTAGTTATTGGAAA+TGG | - | chr1_2:64431717-64431736 | Msa0084800:intron | 20.0% |
| !! | TTCATTTAGTTATTGGAAAT+GGG | - | chr1_2:64431718-64431737 | Msa0084800:intron | 20.0% |
| !!! | CTTTTTTATATTAAATGGGT+AGG | - | chr1_2:64431848-64431867 | Msa0084800:CDS | 20.0% |
| !!! | TTTAATTTGGAGCATAATTT+GGG | - | chr1_2:64431895-64431914 | Msa0084800:CDS | 20.0% |
| !!! | TGGTTTAATTCTATTTCTAA+TGG | - | chr1_2:64431921-64431940 | Msa0084800:CDS | 20.0% |
| !!! | TTGATTGATATTTTTGTTGA+AGG | - | chr1_2:64432208-64432227 | Msa0084800:CDS | 20.0% |
| !!! | CAGAAAACTTGTAATTTTAA+AGG | + | chr1_2:64433006-64433025 | None:intergenic | 20.0% |
| !!! | TTAGCTTTAACATGAATTTA+TGG | + | chr1_2:64433370-64433389 | None:intergenic | 20.0% |
| !! | TTAATTATCATATTTACCAC+CGG | - | chr1_2:64433414-64433433 | Msa0084800:CDS | 20.0% |
| !!! | ATATTTCACATCTTTGTTTT+TGG | - | chr1_2:64433839-64433858 | Msa0084800:intron | 20.0% |
| !!! | GAAGTAAAAAAAAAGTGTTA+AGG | + | chr1_2:64434132-64434151 | None:intergenic | 20.0% |
| !! | ATATACAAGTTAGTTGATTA+GGG | + | chr1_2:64435605-64435624 | None:intergenic | 20.0% |
| ! | GTAAGAAAGAAAGAAAAGAA+AGG | - | chr1_2:64431379-64431398 | Msa0084800:three_prime_UTR | 25.0% |
| ! | GAAAGGATTGAAAATGAATA+TGG | - | chr1_2:64431396-64431415 | Msa0084800:three_prime_UTR | 25.0% |
| ! | TGAAACATTGAATAGAAAGA+AGG | + | chr1_2:64431595-64431614 | None:intergenic | 25.0% |
| ! | TAAAAGAAAAAACGTTCACT+GGG | + | chr1_2:64431683-64431702 | None:intergenic | 25.0% |
| ! | ATAAAAGAAAAAACGTTCAC+TGG | + | chr1_2:64431684-64431703 | None:intergenic | 25.0% |
| !!! | TAAAGAAAGAGGTATCAAAT+GGG | - | chr1_2:64431741-64431760 | Msa0084800:intron | 25.0% |
| ! | GATAATGAGTAAAACAATGA+GGG | - | chr1_2:64431763-64431782 | Msa0084800:intron | 25.0% |
| ! | ATAATGAGTAAAACAATGAG+GGG | - | chr1_2:64431764-64431783 | Msa0084800:intron | 25.0% |
| !! | TTTCTTATCATATTTTGTGC+TGG | - | chr1_2:64431802-64431821 | Msa0084800:exon | 25.0% |
| !!! | GTTTAATTTGGAGCATAATT+TGG | - | chr1_2:64431894-64431913 | Msa0084800:CDS | 25.0% |
| ! | GCTGTTAAATTTGCAAATAA+TGG | - | chr1_2:64432404-64432423 | Msa0084800:intron | 25.0% |
| ! | TCAAATCCTATAGTAAAGTA+GGG | + | chr1_2:64432581-64432600 | None:intergenic | 25.0% |
| ! | AACTATATGTGTACCATTTA+AGG | - | chr1_2:64432756-64432775 | Msa0084800:intron | 25.0% |
| ! | GTAAAACTTATTGAGATGTA+TGG | - | chr1_2:64432924-64432943 | Msa0084800:intron | 25.0% |
| !! | TTTTATGCTGTGAATTTTCA+AGG | - | chr1_2:64432971-64432990 | Msa0084800:intron | 25.0% |
| ! | ACATATCATTCACAAATGAT+AGG | - | chr1_2:64433086-64433105 | Msa0084800:intron | 25.0% |
| ! | TAAAAGGAATCGATATAGTT+AGG | - | chr1_2:64433185-64433204 | Msa0084800:intron | 25.0% |
| ! | TCAATACTATTACTCATTCT+AGG | + | chr1_2:64433265-64433284 | None:intergenic | 25.0% |
| !!! | CATGCATTTTTTATGCTTTA+TGG | - | chr1_2:64433659-64433678 | Msa0084800:intron | 25.0% |
| ! | ATTCAAGAAATTGTATAACC+TGG | + | chr1_2:64433746-64433765 | None:intergenic | 25.0% |
| ! | GATGTGAAATATTTAACTAC+TGG | + | chr1_2:64433831-64433850 | None:intergenic | 25.0% |
| !!! | AAAAAAAAGTGTTAAGGGTA+GGG | + | chr1_2:64434126-64434145 | None:intergenic | 25.0% |
| !!! | AAAAAAAAAGTGTTAAGGGT+AGG | + | chr1_2:64434127-64434146 | None:intergenic | 25.0% |
| ! | TGCTGTAAGATTTATATTGT+TGG | - | chr1_2:64434286-64434305 | Msa0084800:intron | 25.0% |
| ! | GCTGTAAGATTTATATTGTT+GGG | - | chr1_2:64434287-64434306 | Msa0084800:intron | 25.0% |
| ! | TAACATTTGTCATATCTTGA+TGG | - | chr1_2:64434343-64434362 | Msa0084800:intron | 25.0% |
| ! | GAAGTTAAATATCATTCAGT+TGG | + | chr1_2:64434690-64434709 | None:intergenic | 25.0% |
| ! | AAACTTCATATTCATTGTGT+TGG | - | chr1_2:64434724-64434743 | Msa0084800:CDS | 25.0% |
| ! | ATTTCACTCTTCAAAACTTA+GGG | + | chr1_2:64435066-64435085 | None:intergenic | 25.0% |
| !! | CTTTTCTTTACTATCACTAT+TGG | - | chr1_2:64435405-64435424 | Msa0084800:intron | 25.0% |
| ! | CATATACAAGTTAGTTGATT+AGG | + | chr1_2:64435606-64435625 | None:intergenic | 25.0% |
| ! | TACAAATATACAGTGAAAAC+TGG | + | chr1_2:64435699-64435718 | None:intergenic | 25.0% |
| GAAAAAACCTTGAAAAGACT+TGG | + | chr1_2:64431569-64431588 | None:intergenic | 30.0% | |
| !! | GTAAAGAAAGAGGTATCAAA+TGG | - | chr1_2:64431740-64431759 | Msa0084800:intron | 30.0% |
| GGATAATGAGTAAAACAATG+AGG | - | chr1_2:64431762-64431781 | Msa0084800:intron | 30.0% | |
| ! | TTCTAATGGATGATCAATGA+TGG | - | chr1_2:64431935-64431954 | Msa0084800:intron | 30.0% |
| AATTTAATGTAACCACCGTT+TGG | - | chr1_2:64432010-64432029 | Msa0084800:intron | 30.0% | |
| ATTTAATGTAACCACCGTTT+GGG | - | chr1_2:64432011-64432030 | Msa0084800:intron | 30.0% | |
| TCAATGCTACATAAGCTAAT+AGG | - | chr1_2:64432078-64432097 | Msa0084800:intron | 30.0% | |
| TCTCACTGACAACAAAAATA+AGG | + | chr1_2:64432261-64432280 | None:intergenic | 30.0% | |
| ! | AGTTTTCCCTACTTTACTAT+AGG | - | chr1_2:64432572-64432591 | Msa0084800:intron | 30.0% |
| GTCAAATCCTATAGTAAAGT+AGG | + | chr1_2:64432582-64432601 | None:intergenic | 30.0% | |
| ACTTTACTATAGGATTTGAC+AGG | - | chr1_2:64432582-64432601 | Msa0084800:intron | 30.0% | |
| CTTTACTATAGGATTTGACA+GGG | - | chr1_2:64432583-64432602 | Msa0084800:intron | 30.0% | |
| TTTACTATAGGATTTGACAG+GGG | - | chr1_2:64432584-64432603 | Msa0084800:CDS | 30.0% | |
| ATAAGCAGTGTAACCTTAAA+TGG | + | chr1_2:64432772-64432791 | None:intergenic | 30.0% | |
| ! | ACATCTCAATAAGTTTTACC+TGG | + | chr1_2:64432923-64432942 | None:intergenic | 30.0% |
| TTAGGATTAACATCTGTGTT+TGG | - | chr1_2:64433203-64433222 | Msa0084800:intron | 30.0% | |
| ATTCTTTGACTGCAAAAGTT+AGG | - | chr1_2:64433565-64433584 | Msa0084800:intron | 30.0% | |
| AACTGTTAGTAGAGTGAAAA+CGG | + | chr1_2:64433711-64433730 | None:intergenic | 30.0% | |
| CACTCGAATTGTATTTGATA+CGG | - | chr1_2:64433785-64433804 | Msa0084800:intron | 30.0% | |
| CTTCTACTAAGTGAACAATA+AGG | - | chr1_2:64434069-64434088 | Msa0084800:intron | 30.0% | |
| TCTGCAATTAAATCTGTGTT+CGG | - | chr1_2:64434242-64434261 | Msa0084800:intron | 30.0% | |
| ATTCCTGGTATAAATCCAAA+TGG | - | chr1_2:64434576-64434595 | Msa0084800:CDS | 30.0% | |
| TTCCTGGTATAAATCCAAAT+GGG | - | chr1_2:64434577-64434596 | Msa0084800:CDS | 30.0% | |
| ATATTCATTGTGTTGGAAAG+AGG | - | chr1_2:64434731-64434750 | Msa0084800:CDS | 30.0% | |
| AAATATGTCTTTATTCCCCT+AGG | - | chr1_2:64434768-64434787 | Msa0084800:intron | 30.0% | |
| ! | GTTTTGTGCTATGAAAAGAA+AGG | - | chr1_2:64434903-64434922 | Msa0084800:intron | 30.0% |
| GATTTCACTCTTCAAAACTT+AGG | + | chr1_2:64435067-64435086 | None:intergenic | 30.0% | |
| ATCAGATTTATACAGTCAAG+TGG | - | chr1_2:64435503-64435522 | Msa0084800:CDS | 30.0% | |
| ! | AAACCTTGAAAAGACTTGGT+GGG | + | chr1_2:64431565-64431584 | None:intergenic | 35.0% |
| AAAACCTTGAAAAGACTTGG+TGG | + | chr1_2:64431566-64431585 | None:intergenic | 35.0% | |
| TTGGAAATGGGTAAAGAAAG+AGG | - | chr1_2:64431730-64431749 | Msa0084800:intron | 35.0% | |
| TTGACATTTCGTAACGTGTT+AGG | - | chr1_2:64432134-64432153 | Msa0084800:CDS | 35.0% | |
| TGACATTTCGTAACGTGTTA+GGG | - | chr1_2:64432135-64432154 | Msa0084800:CDS | 35.0% | |
| ! | TTTGAGTGATTCTTTTGCTC+AGG | - | chr1_2:64432466-64432485 | Msa0084800:intron | 35.0% |
| TCTGATGTAACTTATGAGCT+AGG | - | chr1_2:64432509-64432528 | Msa0084800:intron | 35.0% | |
| GAGCTAGGTGATTAAAATTC+TGG | - | chr1_2:64432524-64432543 | Msa0084800:intron | 35.0% | |
| TTACTATAGGATTTGACAGG+GGG | - | chr1_2:64432585-64432604 | Msa0084800:CDS | 35.0% | |
| ATTACAGATAAACCCTGAGA+AGG | - | chr1_2:64432803-64432822 | Msa0084800:CDS | 35.0% | |
| CGAGATGTAGCTAAACAAAA+TGG | - | chr1_2:64432840-64432859 | Msa0084800:intron | 35.0% | |
| GATGTAGCTAAACAAAATGG+TGG | - | chr1_2:64432843-64432862 | Msa0084800:intron | 35.0% | |
| ! | AAACAAAATGGTGGAAGTAC+TGG | - | chr1_2:64432852-64432871 | Msa0084800:intron | 35.0% |
| TACTGGAGTCAAAGATTTCA+TGG | - | chr1_2:64432869-64432888 | Msa0084800:intron | 35.0% | |
| AAAGATTTCATGGATGGCAT+GGG | - | chr1_2:64432879-64432898 | Msa0084800:intron | 35.0% | |
| ATGGCTATGTATTTCATCCA+AGG | - | chr1_2:64432943-64432962 | Msa0084800:intron | 35.0% | |
| TGGCTATGTATTTCATCCAA+GGG | - | chr1_2:64432944-64432963 | Msa0084800:intron | 35.0% | |
| CACAGCATAAAATATACCCT+TGG | + | chr1_2:64432963-64432982 | None:intergenic | 35.0% | |
| TAAGCAACTTGCCATCATAT+AGG | - | chr1_2:64433050-64433069 | Msa0084800:intron | 35.0% | |
| AAGCAGAATCAGTTATCTTC+TGG | + | chr1_2:64433510-64433529 | None:intergenic | 35.0% | |
| AAAGTTAGGAGAGCTAAAAC+TGG | - | chr1_2:64433579-64433598 | Msa0084800:intron | 35.0% | |
| AAGTTAGGAGAGCTAAAACT+GGG | - | chr1_2:64433580-64433599 | Msa0084800:intron | 35.0% | |
| AGCATAAAAAATGCATGCCT+TGG | + | chr1_2:64433656-64433675 | None:intergenic | 35.0% | |
| AATTGTATAACCTGGCAAGA+AGG | + | chr1_2:64433738-64433757 | None:intergenic | 35.0% | |
| ACTGGCATTATACTTACTGT+AGG | + | chr1_2:64433813-64433832 | None:intergenic | 35.0% | |
| ! | ATTTACCCATTTTCCTGAAC+AGG | - | chr1_2:64433877-64433896 | Msa0084800:intron | 35.0% |
| ! | TTTACCCATTTTCCTGAACA+GGG | - | chr1_2:64433878-64433897 | Msa0084800:intron | 35.0% |
| AAGGAATATGGATGTGTGTA+TGG | + | chr1_2:64433997-64434016 | None:intergenic | 35.0% | |
| ATACAGGATCACTCAAAGAA+TGG | + | chr1_2:64434166-64434185 | None:intergenic | 35.0% | |
| ATTCTTTGAGTGATCCTGTA+TGG | - | chr1_2:64434165-64434184 | Msa0084800:CDS | 35.0% | |
| GAACACAGATTTAATTGCAG+AGG | + | chr1_2:64434243-64434262 | None:intergenic | 35.0% | |
| CTGCAATTAAATCTGTGTTC+GGG | - | chr1_2:64434243-64434262 | Msa0084800:intron | 35.0% | |
| ! | TTGTCATATCTTGATGGTAC+AGG | - | chr1_2:64434349-64434368 | Msa0084800:intron | 35.0% |
| TGACAAATTGGAGAAGCTTA+GGG | - | chr1_2:64434373-64434392 | Msa0084800:intron | 35.0% | |
| TGTTATTGTTACAATCCCCA+CGG | - | chr1_2:64434448-64434467 | Msa0084800:intron | 35.0% | |
| !! | TTATTTCTAGGTCATACCGT+GGG | + | chr1_2:64434467-64434486 | None:intergenic | 35.0% |
| !! | ATTATTTCTAGGTCATACCG+TGG | + | chr1_2:64434468-64434487 | None:intergenic | 35.0% |
| TGAAGTCCTTAAATCAGTCT+TGG | + | chr1_2:64434555-64434574 | None:intergenic | 35.0% | |
| ATTTAAGGACTTCAGATTCC+TGG | - | chr1_2:64434561-64434580 | Msa0084800:intron | 35.0% | |
| ! | CTTTTCTCACTAGGTGAAAT+TGG | + | chr1_2:64434645-64434664 | None:intergenic | 35.0% |
| CAATTTCACCTAGTGAGAAA+AGG | - | chr1_2:64434643-64434662 | Msa0084800:CDS | 35.0% | |
| AACGCTTTCTTTCTTCAATG+AGG | + | chr1_2:64434827-64434846 | None:intergenic | 35.0% | |
| ACAAAACTTGCAATCAGATG+CGG | + | chr1_2:64434890-64434909 | None:intergenic | 35.0% | |
| !! | TACTGCTAGCTAACTTTTTC+AGG | - | chr1_2:64435088-64435107 | Msa0084800:intron | 35.0% |
| CTTATCTCAACATCAACAAG+TGG | + | chr1_2:64435182-64435201 | None:intergenic | 35.0% | |
| CTTGTTGATGTTGAGATAAG+AGG | - | chr1_2:64435182-64435201 | Msa0084800:intron | 35.0% | |
| ! | AATTTCTGGGTGACATTATC+TGG | - | chr1_2:64435219-64435238 | Msa0084800:intron | 35.0% |
| GTGAAAACTGGCATTTCATA+TGG | + | chr1_2:64435687-64435706 | None:intergenic | 35.0% | |
| CGTGGACGTATTTGAATCAA+GGG | - | chr1_2:64431310-64431329 | Msa0084800:three_prime_UTR | 40.0% | |
| AACAAGTTCAATGGCCATCA+AGG | - | chr1_2:64431450-64431469 | Msa0084800:three_prime_UTR | 40.0% | |
| ACAAGTTCAATGGCCATCAA+GGG | - | chr1_2:64431451-64431470 | Msa0084800:three_prime_UTR | 40.0% | |
| AAACAAAGGAGGATGCTTTG+TGG | + | chr1_2:64431519-64431538 | None:intergenic | 40.0% | |
| TTGGAGCATAATTTGGGTGA+TGG | - | chr1_2:64431901-64431920 | Msa0084800:CDS | 40.0% | |
| TATTACTGATGTCGACGTGT+CGG | + | chr1_2:64431971-64431990 | None:intergenic | 40.0% | |
| ACACCAATACAACACCCAAA+CGG | + | chr1_2:64432028-64432047 | None:intergenic | 40.0% | |
| ! | ACTTCCAATTGAAGGTGTGT+CGG | + | chr1_2:64432057-64432076 | None:intergenic | 40.0% |
| ! | GCATTGACACTTCCAATTGA+AGG | + | chr1_2:64432065-64432084 | None:intergenic | 40.0% |
| ! | TTTGTTGTCAGTGAGATCAG+TGG | - | chr1_2:64432265-64432284 | Msa0084800:intron | 40.0% |
| GCTCCTACAGAATCTATATC+CGG | - | chr1_2:64432290-64432309 | Msa0084800:intron | 40.0% | |
| CTCCTACAGAATCTATATCC+GGG | - | chr1_2:64432291-64432310 | Msa0084800:intron | 40.0% | |
| AACCCGGATATAGATTCTGT+AGG | + | chr1_2:64432296-64432315 | None:intergenic | 40.0% | |
| !! | GAGAGGAAGTATTACATGCT+AGG | - | chr1_2:64432338-64432357 | Msa0084800:intron | 40.0% |
| !! | AGGAAGTATTACATGCTAGG+TGG | - | chr1_2:64432341-64432360 | Msa0084800:intron | 40.0% |
| !! | GGAAGTATTACATGCTAGGT+GGG | - | chr1_2:64432342-64432361 | Msa0084800:intron | 40.0% |
| TATTACATGCTAGGTGGGAA+AGG | - | chr1_2:64432347-64432366 | Msa0084800:intron | 40.0% | |
| GAATCACTCAAAGAATGTGC+CGG | + | chr1_2:64432458-64432477 | None:intergenic | 40.0% | |
| AGAGCGAAAAGTGGATAATC+AGG | + | chr1_2:64432633-64432652 | None:intergenic | 40.0% | |
| CTTACTTCAAGAGCGAAAAG+TGG | + | chr1_2:64432642-64432661 | None:intergenic | 40.0% | |
| ! | TTTTCGCTCTTGAAGTAAGC+TGG | - | chr1_2:64432643-64432662 | Msa0084800:CDS | 40.0% |
| GGAGTCAAAGATTTCATGGA+TGG | - | chr1_2:64432873-64432892 | Msa0084800:intron | 40.0% | |
| CAAAGATTTCATGGATGGCA+TGG | - | chr1_2:64432878-64432897 | Msa0084800:intron | 40.0% | |
| TCTTGGAATGATAGTAGACC+AGG | - | chr1_2:64432902-64432921 | Msa0084800:intron | 40.0% | |
| TGAAGCTATTGCGATTTCCA+AGG | - | chr1_2:64433636-64433655 | Msa0084800:intron | 40.0% | |
| ACAGTTAAAACCTTCTTGCC+AGG | - | chr1_2:64433725-64433744 | Msa0084800:intron | 40.0% | |
| ATGACCCTGTTCAGGAAAAT+GGG | + | chr1_2:64433885-64433904 | None:intergenic | 40.0% | |
| TATGACCCTGTTCAGGAAAA+TGG | + | chr1_2:64433886-64433905 | None:intergenic | 40.0% | |
| ATTGTCCTTGCCTGATTTCT+TGG | - | chr1_2:64433916-64433935 | Msa0084800:intron | 40.0% | |
| ATGGATGCATCCAAGAAATC+AGG | + | chr1_2:64433929-64433948 | None:intergenic | 40.0% | |
| GATTTCTTGGATGCATCCAT+CGG | - | chr1_2:64433929-64433948 | Msa0084800:intron | 40.0% | |
| ATTTCTTGGATGCATCCATC+GGG | - | chr1_2:64433930-64433949 | Msa0084800:intron | 40.0% | |
| ATCCATCGGGAAGATACTAA+AGG | - | chr1_2:64433943-64433962 | Msa0084800:intron | 40.0% | |
| TACCTTTAGTATCTTCCCGA+TGG | + | chr1_2:64433948-64433967 | None:intergenic | 40.0% | |
| ATTGGTATCAACAGCCATAC+AGG | + | chr1_2:64434182-64434201 | None:intergenic | 40.0% | |
| CTTAGCTGCAGCAGAATAAT+TGG | + | chr1_2:64434200-64434219 | None:intergenic | 40.0% | |
| AATCTTACAGCATCTTGACG+AGG | + | chr1_2:64434278-64434297 | None:intergenic | 40.0% | |
| CTGACAAATTGGAGAAGCTT+AGG | - | chr1_2:64434372-64434391 | Msa0084800:intron | 40.0% | |
| !! | TATTTCTAGGTCATACCGTG+GGG | + | chr1_2:64434466-64434485 | None:intergenic | 40.0% |
| TAAATCAGTCTTGGCAGTGA+TGG | + | chr1_2:64434546-64434565 | None:intergenic | 40.0% | |
| ! | TCACTGCCAAGACTGATTTA+AGG | - | chr1_2:64434546-64434565 | Msa0084800:intron | 40.0% |
| CACCCATTTGGATTTATACC+AGG | + | chr1_2:64434582-64434601 | None:intergenic | 40.0% | |
| CTGGTATAAATCCAAATGGG+TGG | - | chr1_2:64434580-64434599 | Msa0084800:CDS | 40.0% | |
| ACGAACAATGACATCGTGTT+CGG | + | chr1_2:64434613-64434632 | None:intergenic | 40.0% | |
| !! | CAGTTGGTAAACTGCAACAA+CGG | + | chr1_2:64434674-64434693 | None:intergenic | 40.0% |
| TCATTAACTGCCATCACCTA+GGG | + | chr1_2:64434787-64434806 | None:intergenic | 40.0% | |
| TTGACAATGAGTCTCTTCAC+AGG | + | chr1_2:64434850-64434869 | None:intergenic | 40.0% | |
| TGTTCCTGCTCTCAAATTTC+TGG | - | chr1_2:64435205-64435224 | Msa0084800:intron | 40.0% | |
| GTTCCTGCTCTCAAATTTCT+GGG | - | chr1_2:64435206-64435225 | Msa0084800:intron | 40.0% | |
| ATAAGCAAAAGCCCAAGTGT+GGG | + | chr1_2:64435652-64435671 | None:intergenic | 40.0% | |
| AATAAGCAAAAGCCCAAGTG+TGG | + | chr1_2:64435653-64435672 | None:intergenic | 40.0% | |
| ! | GGAGAGAAGAAGCATAAGAG+TGG | + | chr1_2:64431426-64431445 | None:intergenic | 45.0% |
| TCTCCGCGTAACAAGTTCAA+TGG | - | chr1_2:64431441-64431460 | Msa0084800:three_prime_UTR | 45.0% | |
| !! | TGGCCATTGAACTTGTTACG+CGG | + | chr1_2:64431447-64431466 | None:intergenic | 45.0% |
| GAAAGGAAAGAGAGGAGATG+GGG | + | chr1_2:64431497-64431516 | None:intergenic | 45.0% | |
| GGAAAGGAAAGAGAGGAGAT+GGG | + | chr1_2:64431498-64431517 | None:intergenic | 45.0% | |
| TGGAAAGGAAAGAGAGGAGA+TGG | + | chr1_2:64431499-64431518 | None:intergenic | 45.0% | |
| GCTTTGTGGAAAGGAAAGAG+AGG | + | chr1_2:64431505-64431524 | None:intergenic | 45.0% | |
| AAGGAGGATGCTTTGTGGAA+AGG | + | chr1_2:64431514-64431533 | None:intergenic | 45.0% | |
| ! | CAACCCACCAAGTCTTTTCA+AGG | - | chr1_2:64431559-64431578 | Msa0084800:three_prime_UTR | 45.0% |
| ! | ACGTGTTAGGGTTTTCGTTG+AGG | - | chr1_2:64432147-64432166 | Msa0084800:CDS | 45.0% |
| ! | GTTAGGGTTTTCGTTGAGGT+AGG | - | chr1_2:64432151-64432170 | Msa0084800:CDS | 45.0% |
| TATATCCGGGTTTGACGACA+TGG | - | chr1_2:64432304-64432323 | Msa0084800:intron | 45.0% | |
| TCAGTGGAAACCACAAGAGT+GGG | + | chr1_2:64432434-64432453 | None:intergenic | 45.0% | |
| ATCAGTGGAAACCACAAGAG+TGG | + | chr1_2:64432435-64432454 | None:intergenic | 45.0% | |
| TCTTGTGGTTTCCACTGATC+CGG | - | chr1_2:64432436-64432455 | Msa0084800:intron | 45.0% | |
| AGATAAACCCTGAGAAGGCT+AGG | - | chr1_2:64432808-64432827 | Msa0084800:CDS | 45.0% | |
| GATAAACCCTGAGAAGGCTA+GGG | - | chr1_2:64432809-64432828 | Msa0084800:CDS | 45.0% | |
| ! | AATCTTCCCTAGCCTTCTCA+GGG | + | chr1_2:64432818-64432837 | None:intergenic | 45.0% |
| ! | AAATCTTCCCTAGCCTTCTC+AGG | + | chr1_2:64432819-64432838 | None:intergenic | 45.0% |
| CAACTTGCCATCATATAGGC+AGG | - | chr1_2:64433054-64433073 | Msa0084800:intron | 45.0% | |
| GTATGTGCCTGCCTATATGA+TGG | + | chr1_2:64433064-64433083 | None:intergenic | 45.0% | |
| GTGCAGCTCTGTAGCATAAA+AGG | - | chr1_2:64433169-64433188 | Msa0084800:intron | 45.0% | |
| TATTGAACAAACTCCGCTGC+TGG | - | chr1_2:64433279-64433298 | Msa0084800:CDS | 45.0% | |
| GCATTCTTTCAATCCAGCAG+CGG | + | chr1_2:64433295-64433314 | None:intergenic | 45.0% | |
| AATAGCTTAAGGTGTGCTGC+CGG | + | chr1_2:64433436-64433455 | None:intergenic | 45.0% | |
| GAAACAACGCGTCTTAGAGA+AGG | + | chr1_2:64433545-64433564 | None:intergenic | 45.0% | |
| GCTAAAACTGGGAGAGTTAC+TGG | - | chr1_2:64433591-64433610 | Msa0084800:intron | 45.0% | |
| CGTAATGTATGACCCTGTTC+AGG | + | chr1_2:64433893-64433912 | None:intergenic | 45.0% | |
| TGCATCCAAGAAATCAGGCA+AGG | + | chr1_2:64433924-64433943 | None:intergenic | 45.0% | |
| GATGGTACAGGCTGACAAAT+TGG | - | chr1_2:64434361-64434380 | Msa0084800:intron | 45.0% | |
| AATTGGAGAAGCTTAGGGAG+AGG | - | chr1_2:64434378-64434397 | Msa0084800:intron | 45.0% | |
| TCGGTGAAAAACCACCCATT+TGG | + | chr1_2:64434594-64434613 | None:intergenic | 45.0% | |
| ! | CGGAAAAGCCTTTTCTCACT+AGG | + | chr1_2:64434654-64434673 | None:intergenic | 45.0% |
| GTCTTTATTCCCCTAGGTGA+TGG | - | chr1_2:64434774-64434793 | Msa0084800:intron | 45.0% | |
| CATTAACTGCCATCACCTAG+GGG | + | chr1_2:64434786-64434805 | None:intergenic | 45.0% | |
| CTCATTAACTGCCATCACCT+AGG | + | chr1_2:64434788-64434807 | None:intergenic | 45.0% | |
| ! | CTTCAATGAGGCACTCAATC+TGG | + | chr1_2:64434815-64434834 | None:intergenic | 45.0% |
| AACTTGCAATCAGATGCGGA+TGG | + | chr1_2:64434886-64434905 | None:intergenic | 45.0% | |
| ATCGATAAGCTGGAGAGTTC+TGG | + | chr1_2:64435149-64435168 | None:intergenic | 45.0% | |
| TGCTTGGATCATCGATAAGC+TGG | + | chr1_2:64435159-64435178 | None:intergenic | 45.0% | |
| CAACATCAACAAGTGGTGCT+TGG | + | chr1_2:64435175-64435194 | None:intergenic | 45.0% | |
| TCACCCAGAAATTTGAGAGC+AGG | + | chr1_2:64435212-64435231 | None:intergenic | 45.0% | |
| ! | AACCCATAACAAGAGCACAC+AGG | - | chr1_2:64435468-64435487 | Msa0084800:intron | 45.0% |
| ! | GTCCTGTGTGCTCTTGTTAT+GGG | + | chr1_2:64435473-64435492 | None:intergenic | 45.0% |
| TGTCCTGTGTGCTCTTGTTA+TGG | + | chr1_2:64435474-64435493 | None:intergenic | 45.0% | |
| AGCGCGCAAAGAAACAAAGG+AGG | + | chr1_2:64431530-64431549 | None:intergenic | 50.0% | |
| ! | GGAAGCGCGCAAAGAAACAA+AGG | + | chr1_2:64431533-64431552 | None:intergenic | 50.0% |
| !! | AGACTTGGTGGGTTGCTTAG+TGG | + | chr1_2:64431554-64431573 | None:intergenic | 50.0% |
| CCAATACAACACCCAAACGG+TGG | + | chr1_2:64432025-64432044 | None:intergenic | 50.0% | |
| ! | CCACCGTTTGGGTGTTGTAT+TGG | - | chr1_2:64432022-64432041 | Msa0084800:intron | 50.0% |
| GACACCGACACACCTTCAAT+TGG | - | chr1_2:64432050-64432069 | Msa0084800:intron | 50.0% | |
| AGCAACCATGTCGTCAAACC+CGG | + | chr1_2:64432312-64432331 | None:intergenic | 50.0% | |
| GGTTTGACGACATGGTTGCT+GGG | - | chr1_2:64432312-64432331 | Msa0084800:intron | 50.0% | |
| TACATGCTAGGTGGGAAAGG+AGG | - | chr1_2:64432350-64432369 | Msa0084800:intron | 50.0% | |
| ACATGCTAGGTGGGAAAGGA+GGG | - | chr1_2:64432351-64432370 | Msa0084800:intron | 50.0% | |
| ! | TAATGGACACCCCACTCTTG+TGG | - | chr1_2:64432421-64432440 | Msa0084800:intron | 50.0% |
| CAGTGGAAACCACAAGAGTG+GGG | + | chr1_2:64432433-64432452 | None:intergenic | 50.0% | |
| CAAAGAATGTGCCGGATCAG+TGG | + | chr1_2:64432450-64432469 | None:intergenic | 50.0% | |
| TTCATGGATGGCATGGGTCT+TGG | - | chr1_2:64432885-64432904 | Msa0084800:intron | 50.0% | |
| TTACTGGATACACCTCCTCC+TGG | - | chr1_2:64433607-64433626 | Msa0084800:intron | 50.0% | |
| ATAGCTTCATCCAGTCCAGG+AGG | + | chr1_2:64433625-64433644 | None:intergenic | 50.0% | |
| GCAATAGCTTCATCCAGTCC+AGG | + | chr1_2:64433628-64433647 | None:intergenic | 50.0% | |
| TTGCAATCAGATGCGGATGG+TGG | + | chr1_2:64434883-64434902 | None:intergenic | 50.0% | |
| TTCCACATGCTTGAGCTGAG+TGG | - | chr1_2:64434952-64434971 | Msa0084800:intron | 50.0% | |
| ! | CAAGAGCACACAGGACATGA+AGG | - | chr1_2:64435477-64435496 | Msa0084800:CDS | 50.0% |
| TACAGTCAAGTGGTAGCTGC+TGG | - | chr1_2:64435513-64435532 | Msa0084800:CDS | 50.0% | |
| TCAGCTCTCATTCCCACACT+TGG | - | chr1_2:64435637-64435656 | Msa0084800:exon | 50.0% | |
| CAGCTCTCATTCCCACACTT+GGG | - | chr1_2:64435638-64435657 | Msa0084800:exon | 50.0% | |
| !! | GAAGGAGAGAGCACCCTTGA+TGG | + | chr1_2:64431467-64431486 | None:intergenic | 55.0% |
| GGAAAGAGAGGAGATGGGGT+GGG | + | chr1_2:64431493-64431512 | None:intergenic | 55.0% | |
| AGGAAAGAGAGGAGATGGGG+TGG | + | chr1_2:64431494-64431513 | None:intergenic | 55.0% | |
| GGGTTTGACGACATGGTTGC+TGG | - | chr1_2:64432311-64432330 | Msa0084800:intron | 55.0% | |
| ACATGGTTGCTGGGACTGAG+AGG | - | chr1_2:64432321-64432340 | Msa0084800:intron | 55.0% | |
| CATGCTAGGTGGGAAAGGAG+GGG | - | chr1_2:64432352-64432371 | Msa0084800:intron | 55.0% | |
| TAGGTGGGAAAGGAGGGGTA+GGG | - | chr1_2:64432357-64432376 | Msa0084800:intron | 55.0% | |
| ! | GGATTTGACAGGGGGAGCAT+TGG | - | chr1_2:64432593-64432612 | Msa0084800:CDS | 55.0% |
| !! | GGAGCATTGGTACAGGTGGA+TGG | - | chr1_2:64432606-64432625 | Msa0084800:CDS | 55.0% |
| CACCACTCAGCTCAAGCATG+TGG | + | chr1_2:64434957-64434976 | None:intergenic | 55.0% | |
| AGTCAAGTGGTAGCTGCTGG+AGG | - | chr1_2:64435516-64435535 | Msa0084800:CDS | 55.0% | |
| AGGAGATGGGGTGGGATGGA+AGG | + | chr1_2:64431485-64431504 | None:intergenic | 60.0% | |
| AGAGAGGAGATGGGGTGGGA+TGG | + | chr1_2:64431489-64431508 | None:intergenic | 60.0% | |
| CTAGGTGGGAAAGGAGGGGT+AGG | - | chr1_2:64432356-64432375 | Msa0084800:intron | 60.0% | |
| !! | GACAGGGGGAGCATTGGTAC+AGG | - | chr1_2:64432599-64432618 | Msa0084800:CDS | 60.0% |
| !! | AGGGGGAGCATTGGTACAGG+TGG | - | chr1_2:64432602-64432621 | Msa0084800:CDS | 60.0% |
| AGCTTAAGGTGTGCTGCCGG+TGG | + | chr1_2:64433433-64433452 | None:intergenic | 60.0% | |
| GGATACACCTCCTCCTGGAC+TGG | - | chr1_2:64433612-64433631 | Msa0084800:intron | 60.0% | |
| GCTTCATCCAGTCCAGGAGG+AGG | + | chr1_2:64433622-64433641 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 64431310 | 64435743 | 64431310 | ID=Msa0084800;Name=Msa0084800 |
| chr1_2 | mRNA | 64431310 | 64435743 | 64431310 | ID=Msa0084800-mRNA-1;Parent=Msa0084800;Name=Msa0084800-mRNA-1;_AED=0.17;_eAED=0.17;_QI=99|1|1|1|0.90|0.83|12|306|405 |
| chr1_2 | exon | 64431310 | 64431595 | 64431310 | ID=Msa0084800-mRNA-1:exon:21795;Parent=Msa0084800-mRNA-1 |
| chr1_2 | exon | 64431786 | 64431943 | 64431786 | ID=Msa0084800-mRNA-1:exon:21794;Parent=Msa0084800-mRNA-1 |
| chr1_2 | exon | 64432129 | 64432263 | 64432129 | ID=Msa0084800-mRNA-1:exon:21793;Parent=Msa0084800-mRNA-1 |
| chr1_2 | exon | 64432584 | 64432682 | 64432584 | ID=Msa0084800-mRNA-1:exon:21792;Parent=Msa0084800-mRNA-1 |
| chr1_2 | exon | 64432764 | 64432838 | 64432764 | ID=Msa0084800-mRNA-1:exon:21791;Parent=Msa0084800-mRNA-1 |
| chr1_2 | exon | 64433089 | 64433154 | 64433089 | ID=Msa0084800-mRNA-1:exon:21790;Parent=Msa0084800-mRNA-1 |
| chr1_2 | exon | 64433238 | 64433306 | 64433238 | ID=Msa0084800-mRNA-1:exon:21789;Parent=Msa0084800-mRNA-1 |
| chr1_2 | exon | 64433396 | 64433470 | 64433396 | ID=Msa0084800-mRNA-1:exon:21788;Parent=Msa0084800-mRNA-1 |
| chr1_2 | exon | 64434130 | 64434243 | 64434130 | ID=Msa0084800-mRNA-1:exon:21787;Parent=Msa0084800-mRNA-1 |
| chr1_2 | exon | 64434397 | 64434459 | 64434397 | ID=Msa0084800-mRNA-1:exon:21786;Parent=Msa0084800-mRNA-1 |
| chr1_2 | exon | 64434566 | 64434777 | 64434566 | ID=Msa0084800-mRNA-1:exon:21785;Parent=Msa0084800-mRNA-1 |
| chr1_2 | exon | 64435473 | 64435743 | 64435473 | ID=Msa0084800-mRNA-1:exon:21784;Parent=Msa0084800-mRNA-1 |
| chr1_2 | five_prime_UTR | 64435645 | 64435743 | 64435645 | ID=Msa0084800-mRNA-1:five_prime_utr;Parent=Msa0084800-mRNA-1 |
| chr1_2 | CDS | 64435473 | 64435644 | 64435473 | ID=Msa0084800-mRNA-1:cds;Parent=Msa0084800-mRNA-1 |
| chr1_2 | CDS | 64434566 | 64434777 | 64434566 | ID=Msa0084800-mRNA-1:cds;Parent=Msa0084800-mRNA-1 |
| chr1_2 | CDS | 64434397 | 64434459 | 64434397 | ID=Msa0084800-mRNA-1:cds;Parent=Msa0084800-mRNA-1 |
| chr1_2 | CDS | 64434130 | 64434243 | 64434130 | ID=Msa0084800-mRNA-1:cds;Parent=Msa0084800-mRNA-1 |
| chr1_2 | CDS | 64433396 | 64433470 | 64433396 | ID=Msa0084800-mRNA-1:cds;Parent=Msa0084800-mRNA-1 |
| chr1_2 | CDS | 64433238 | 64433306 | 64433238 | ID=Msa0084800-mRNA-1:cds;Parent=Msa0084800-mRNA-1 |
| chr1_2 | CDS | 64433089 | 64433154 | 64433089 | ID=Msa0084800-mRNA-1:cds;Parent=Msa0084800-mRNA-1 |
| chr1_2 | CDS | 64432764 | 64432838 | 64432764 | ID=Msa0084800-mRNA-1:cds;Parent=Msa0084800-mRNA-1 |
| chr1_2 | CDS | 64432584 | 64432682 | 64432584 | ID=Msa0084800-mRNA-1:cds;Parent=Msa0084800-mRNA-1 |
| chr1_2 | CDS | 64432129 | 64432263 | 64432129 | ID=Msa0084800-mRNA-1:cds;Parent=Msa0084800-mRNA-1 |
| chr1_2 | CDS | 64431806 | 64431943 | 64431806 | ID=Msa0084800-mRNA-1:cds;Parent=Msa0084800-mRNA-1 |
| chr1_2 | three_prime_UTR | 64431786 | 64431805 | 64431786 | ID=Msa0084800-mRNA-1:three_prime_utr;Parent=Msa0084800-mRNA-1 |
| chr1_2 | three_prime_UTR | 64431310 | 64431595 | 64431310 | ID=Msa0084800-mRNA-1:three_prime_utr;Parent=Msa0084800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
