AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0833940


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0833940 MtrunA17_Chr5g0399691 93.040 273 16 1 1 270 1 273 2.82e-157 440
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0833940 AT4G17540.1 45.714 280 123 5 10 285 28 282 3.96e-65 206

Find 101 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCCATTTACTTTGAAATT+TGG 0.141463 5_4:+7020706 Msa0833940:CDS
TGTCCAAATTTCAAAGTAAA+TGG 0.158302 5_4:-7020709 None:intergenic
GCATTAGATGACAGGTATTT+AGG 0.201098 5_4:+7024388 Msa0833940:three_prime_UTR
GTTGGAAGCCCTTTAAATTT+AGG 0.210875 5_4:+7020775 Msa0833940:CDS
GGACAAGTATTTACTGGTTT+TGG 0.211578 5_4:+7020727 Msa0833940:CDS
TAAGGGAGATCTCACGGTTT+AGG 0.233689 5_4:-7024248 None:intergenic
GCTTGCACGTTATCGCTTAA+AGG 0.246676 5_4:+7024219 Msa0833940:three_prime_UTR
AGAGTAGTACCTAAATTTAA+AGG 0.274370 5_4:-7020784 None:intergenic
CCTATACTATATCCTGTAAT+TGG 0.287565 5_4:-7024321 None:intergenic
AAGGGAGATCTCACGGTTTA+GGG 0.290126 5_4:-7024247 None:intergenic
ATGGGTTACTTACCAATTAC+AGG 0.311687 5_4:+7024309 Msa0833940:three_prime_UTR
CAGTCTGAGAAATTTGATTC+TGG 0.317467 5_4:+7020514 None:intergenic
GCCACAGGTGCAGTCAGTTC+TGG 0.319464 5_4:+7022268 Msa0833940:CDS
TTCATATAGTTGAGGAAGAT+TGG 0.320215 5_4:+7021180 Msa0833940:intron
AAATTTGGACAAGTATTTAC+TGG 0.322518 5_4:+7020721 Msa0833940:CDS
CAAGTTCTTCAATCATTTGC+TGG 0.323313 5_4:-7024012 None:intergenic
CTACAAGTTGCCCCTGCTAA+TGG 0.340138 5_4:+7024290 Msa0833940:three_prime_UTR
GTTGGATGTGGAGTTGGTTT+CGG 0.345001 5_4:+7021225 Msa0833940:CDS
CTTGCACGTTATCGCTTAAA+GGG 0.350496 5_4:+7024220 Msa0833940:three_prime_UTR
ACAAAGATGATGATGAAGTT+TGG 0.354809 5_4:+7022190 Msa0833940:CDS
ACCCGGATTAAACGGTAAAC+TGG 0.357165 5_4:-7022221 None:intergenic
AGAACTAGCTTCAAGTTTGC+TGG 0.358017 5_4:-7024089 None:intergenic
TCCCAGTTTACCGTTTAATC+CGG 0.367717 5_4:+7022219 Msa0833940:CDS
TACAAGTTGCCCCTGCTAAT+GGG 0.377837 5_4:+7024291 Msa0833940:three_prime_UTR
TTGGTTGGAGAGGAGTAAAA+TGG 0.387600 5_4:+7024494 Msa0833940:three_prime_UTR
AAACTTGAAGCTAGTTCTTC+AGG 0.400339 5_4:+7024094 Msa0833940:CDS
TCAACCAATGAACATTGGTT+TGG 0.414979 5_4:+7022351 Msa0833940:CDS
TACATGGGCAAGGGTCTGTT+TGG 0.419304 5_4:+7024475 Msa0833940:three_prime_UTR
TCTGCAAAATCCACTGTTGA+AGG 0.419732 5_4:+7022453 Msa0833940:CDS
AAAGCCAAACCAATGTTCAT+TGG 0.422194 5_4:-7022355 None:intergenic
TGCACCTGTGGCACTTTGTA+AGG 0.422373 5_4:-7022257 None:intergenic
GAGTAGTACCTAAATTTAAA+GGG 0.424503 5_4:-7020783 None:intergenic
GTGGGTGTTGGATGTGGAGT+TGG 0.433318 5_4:+7021219 Msa0833940:CDS
GGCAATGCACCCGGATTAAA+CGG 0.440473 5_4:-7022229 None:intergenic
CATTAGCAGGGGCAACTTGT+AGG 0.443920 5_4:-7024289 None:intergenic
ATCAAGTTATGAGTGCTACT+AGG 0.451482 5_4:+7021036 Msa0833940:CDS
TTTGGAATCGGTTGTGGAGT+TGG 0.458433 5_4:+7020745 Msa0833940:CDS
ATGAGAGCTTACTGATTCGC+TGG 0.460415 5_4:-7022491 None:intergenic
TCAAGTTATGAGTGCTACTA+GGG 0.471040 5_4:+7021037 Msa0833940:CDS
TTGGTAAGTAACCCATTAGC+AGG 0.472572 5_4:-7024302 None:intergenic
TGTGGAGTTGGTTTCGGTCA+TGG 0.472934 5_4:+7021231 Msa0833940:CDS
ACAGGACTTGCTGTGAAACC+TGG 0.477065 5_4:+7022041 Msa0833940:intron
CCAATTACAGGATATAGTAT+AGG 0.478483 5_4:+7024321 Msa0833940:three_prime_UTR
GAATCAATGGAAGCAATTGT+TGG 0.479648 5_4:-7020543 None:intergenic
GTTGGTTTCGGTCATGGTGT+TGG 0.481887 5_4:+7021237 Msa0833940:CDS
ATTGAAGTGGGTGTTGGATG+TGG 0.485704 5_4:+7021213 Msa0833940:CDS
TGGAGGAAAATGAGAAGCTT+CGG 0.486885 5_4:+7024035 Msa0833940:CDS
GCGGTTACAGCTTGAATCAA+TGG 0.487029 5_4:-7020556 None:intergenic
CCTCCTTCTCCCTTCAACAG+TGG 0.488432 5_4:-7022463 None:intergenic
TGGGCAAGGGTCTGTTTGGT+TGG 0.489899 5_4:+7024479 Msa0833940:three_prime_UTR
AAAAGATAAGAGTAGTATTG+AGG 0.494638 5_4:+7020643 Msa0833940:five_prime_UTR
AAGGGTCTGTTTGGTTGGAG+AGG 0.496557 5_4:+7024484 Msa0833940:three_prime_UTR
ACTTCAGCCGACTCTACATA+TGG 0.500649 5_4:+7022400 Msa0833940:CDS
TGTGGAGTTGGTATCGGTGT+TGG 0.502325 5_4:+7020757 Msa0833940:CDS
TTCGGTCATGGTGTTGGAGT+TGG 0.502955 5_4:+7021243 Msa0833940:CDS
CCCAGTTTACCGTTTAATCC+GGG 0.504429 5_4:+7022220 Msa0833940:CDS
TGAATTTGATTCAACACCCC+AGG 0.508485 5_4:-7022059 None:intergenic
ACTAATTAGCATTAGATGAC+AGG 0.510013 5_4:+7024380 Msa0833940:three_prime_UTR
AAGAAAACAAAGAAGAAAGT+AGG 0.525920 5_4:+7024162 Msa0833940:CDS
CACTCAAAACAATCAGTACA+TGG 0.527145 5_4:-7024136 None:intergenic
CTGCAAAATCCACTGTTGAA+GGG 0.528070 5_4:+7022454 Msa0833940:CDS
AAGAATATTGAAGTGGGTGT+TGG 0.528611 5_4:+7021207 Msa0833940:CDS
ATCGGTTGTGGAGTTGGTAT+CGG 0.538819 5_4:+7020751 Msa0833940:CDS
ATAAGAGTAGTATTGAGGAA+TGG 0.547460 5_4:+7020648 Msa0833940:exon
AGATGACAGGTATTTAGGAA+TGG 0.555064 5_4:+7024393 Msa0833940:three_prime_UTR
CCCGGATTAAACGGTAAACT+GGG 0.556288 5_4:-7022220 None:intergenic
GCAAATGATTGAAGAACTTG+TGG 0.559081 5_4:+7024015 Msa0833940:CDS
AAGGATGCTGGCAATGCACC+CGG 0.560291 5_4:-7022238 None:intergenic
CAGGACTTGCTGTGAAACCT+GGG 0.561209 5_4:+7022042 Msa0833940:intron
AGAGAACAAAATACTTCAGA+TGG 0.561726 5_4:+7023841 Msa0833940:CDS
ATAATATAGTAAAAGATACA+TGG 0.562231 5_4:+7024459 Msa0833940:three_prime_UTR
TAGTAAAAGATACATGGGCA+AGG 0.571477 5_4:+7024465 Msa0833940:three_prime_UTR
TCCAGAACTGACTGCACCTG+TGG 0.578803 5_4:-7022269 None:intergenic
TGGTAAGTAACCCATTAGCA+GGG 0.583261 5_4:-7024301 None:intergenic
CTAGCTTCAAGTTTGCTGGA+TGG 0.583563 5_4:-7024085 None:intergenic
TGAGAGCTTACTGATTCGCT+GGG 0.586043 5_4:-7022490 None:intergenic
GTGGCACTTTGTAAGGATGC+TGG 0.588800 5_4:-7022250 None:intergenic
AATCCACTGTTGAAGGGAGA+AGG 0.589188 5_4:+7022460 Msa0833940:CDS
GCATCCTTACAAAGTGCCAC+AGG 0.589278 5_4:+7022253 Msa0833940:CDS
TCAGCTGATCAGTTATCTCA+AGG 0.590242 5_4:+7022316 Msa0833940:CDS
GTTGGAGAGGAGTAAAATGG+AGG 0.596132 5_4:+7024497 Msa0833940:three_prime_UTR
ATATGGCAGTCGAACTGAGA+AGG 0.597072 5_4:+7022417 Msa0833940:CDS
TGGAGCTAAGAATATTGAAG+TGG 0.597204 5_4:+7021200 Msa0833940:CDS
CCACTGTTGAAGGGAGAAGG+AGG 0.603974 5_4:+7022463 Msa0833940:CDS
GGAGCTAAGAATATTGAAGT+GGG 0.605534 5_4:+7021201 Msa0833940:CDS
AGTAAAAGATACATGGGCAA+GGG 0.606431 5_4:+7024466 Msa0833940:three_prime_UTR
AATGATTGAAGAACTTGTGG+AGG 0.616671 5_4:+7024018 Msa0833940:CDS
TAATATAGTAAAAGATACAT+GGG 0.620520 5_4:+7024460 Msa0833940:three_prime_UTR
CTGTTGAAGGGAGAAGGAGG+AGG 0.623525 5_4:+7022466 Msa0833940:CDS
TCGACTGCCATATGTAGAGT+CGG 0.624499 5_4:-7022407 None:intergenic
GGGTCTCAACCAATGAACAT+TGG 0.632984 5_4:+7022346 Msa0833940:intron
GCTTCGGCAGATACTAGTGA+AGG 0.640377 5_4:+7024051 Msa0833940:CDS
TGTTGCAGTGAGTTGAGTTG+AGG 0.643118 5_4:-7020601 None:intergenic
CTCATAACTTGATTCAACAT+CGG 0.655826 5_4:-7021026 None:intergenic
TTGCACGTTATCGCTTAAAG+GGG 0.660290 5_4:+7024221 Msa0833940:three_prime_UTR
AGGGAGATCTCACGGTTTAG+GGG 0.678296 5_4:-7024246 None:intergenic
GGTAAGTAACCCATTAGCAG+GGG 0.690059 5_4:-7024300 None:intergenic
AGGACTTGCTGTGAAACCTG+GGG 0.707838 5_4:+7022043 Msa0833940:intron
CAAGTTATGAGTGCTACTAG+GGG 0.719794 5_4:+7021038 Msa0833940:CDS
ATCGTATTCGTAGAACGTGG+CGG 0.735634 5_4:-7020575 None:intergenic
AGCATCGTATTCGTAGAACG+TGG 0.739027 5_4:-7020578 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+TGG - chr5_4:7023685-7023704 None:intergenic 0.0%
!! AAAAAAAAAAAAAGTGAAAA+AGG - chr5_4:7020925-7020944 None:intergenic 10.0%
!!! AATTTTACAAAATACTATTT+TGG - chr5_4:7022916-7022935 None:intergenic 10.0%
!!! TATTGTTATTTTTTTCAAAA+CGG + chr5_4:7023085-7023104 Msa0833940:intron 10.0%
!!! ATTATTTCTTAATTTTTCTT+GGG - chr5_4:7024444-7024463 None:intergenic 10.0%
!!! TATTATTTCTTAATTTTTCT+TGG - chr5_4:7024445-7024464 None:intergenic 10.0%
!!! TAACTTTAAAAAGTGTATTT+AGG + chr5_4:7021336-7021355 Msa0833940:intron 15.0%
!!! AACTTTAAAAAGTGTATTTA+GGG + chr5_4:7021337-7021356 Msa0833940:intron 15.0%
!!! TTTTGAATTATTGATCATTT+AGG + chr5_4:7021363-7021382 Msa0833940:intron 15.0%
!!! TTTTCTTTTATTATTATGAC+AGG + chr5_4:7022023-7022042 Msa0833940:intron 15.0%
!!! TTGTTTCTTTATATACTTTT+TGG + chr5_4:7023530-7023549 Msa0833940:intron 15.0%
!!! TGTTTATTTATTTTTTCCTA+TGG + chr5_4:7023972-7023991 Msa0833940:intron 15.0%
!! ATAATATAGTAAAAGATACA+TGG + chr5_4:7024459-7024478 Msa0833940:three_prime_UTR 15.0%
!! TAATATAGTAAAAGATACAT+GGG + chr5_4:7024460-7024479 Msa0833940:three_prime_UTR 15.0%
!!! AATCCATTTACTTTGAAATT+TGG + chr5_4:7020706-7020725 Msa0833940:CDS 20.0%
!!! CGAATTTTTTTAGATCATTT+AGG + chr5_4:7021416-7021435 Msa0833940:intron 20.0%
!!! CATAATATTGAAAATTTTCC+AGG + chr5_4:7021448-7021467 Msa0833940:intron 20.0%
!!! TCTATTCATGAGTTTTTTTT+GGG - chr5_4:7022939-7022958 None:intergenic 20.0%
!!! ATCTATTCATGAGTTTTTTT+TGG - chr5_4:7022940-7022959 None:intergenic 20.0%
!! TTTCAAATATCACATTTGTT+TGG + chr5_4:7023291-7023310 Msa0833940:intron 20.0%
!!! TTATTTTTTCCTATGGTTAT+AGG + chr5_4:7023979-7023998 Msa0833940:intron 20.0%
! AAAAGATAAGAGTAGTATTG+AGG + chr5_4:7020643-7020662 Msa0833940:five_prime_UTR 25.0%
! TGTCCAAATTTCAAAGTAAA+TGG - chr5_4:7020712-7020731 None:intergenic 25.0%
! AAATTTGGACAAGTATTTAC+TGG + chr5_4:7020721-7020740 Msa0833940:CDS 25.0%
! GAGTAGTACCTAAATTTAAA+GGG - chr5_4:7020786-7020805 None:intergenic 25.0%
! AGAGTAGTACCTAAATTTAA+AGG - chr5_4:7020787-7020806 None:intergenic 25.0%
! AATCCATAGTAATGTGAAAT+TGG - chr5_4:7020832-7020851 None:intergenic 25.0%
! TTTCACATTACTATGGATTT+CGG + chr5_4:7020833-7020852 Msa0833940:intron 25.0%
! AAAAGGTAATAAGAGATACA+TGG - chr5_4:7020908-7020927 None:intergenic 25.0%
!!! TCTTATTCTGAATTTGTTGT+AGG + chr5_4:7020996-7021015 Msa0833940:intron 25.0%
!!! ACTTGTTTTTCATATAGTTG+AGG + chr5_4:7021172-7021191 Msa0833940:intron 25.0%
! TGAATTATTGATCATTTAGG+AGG + chr5_4:7021366-7021385 Msa0833940:intron 25.0%
!! AATATTGAAAATTTTCCAGG+AGG + chr5_4:7021451-7021470 Msa0833940:intron 25.0%
! ATCTATGATCTATAATACAC+AGG - chr5_4:7021511-7021530 None:intergenic 25.0%
! ATAACAGTTCATAAAGCATA+AGG + chr5_4:7021600-7021619 Msa0833940:intron 25.0%
! TAACAGTTCATAAAGCATAA+GGG + chr5_4:7021601-7021620 Msa0833940:intron 25.0%
!!! GTTTTTTAATATACAGTTCG+AGG - chr5_4:7021722-7021741 None:intergenic 25.0%
! AAAGAAAATATGGAAAGGAT+GGG - chr5_4:7021913-7021932 None:intergenic 25.0%
! TAAAGAAAATATGGAAAGGA+TGG - chr5_4:7021914-7021933 None:intergenic 25.0%
! ATGAAGTGGTAAAGAAAATA+TGG - chr5_4:7021923-7021942 None:intergenic 25.0%
!! ATTTTCTTTACCACTTCATA+TGG + chr5_4:7021924-7021943 Msa0833940:intron 25.0%
!! TTTTCTTTACCACTTCATAT+GGG + chr5_4:7021925-7021944 Msa0833940:intron 25.0%
! TTAAACATGAGATACACAAA+AGG - chr5_4:7022145-7022164 None:intergenic 25.0%
! TAAAAAATCCTCATTCCAAA+TGG - chr5_4:7022730-7022749 None:intergenic 25.0%
!!! ATTTGGAATGAGGATTTTTT+AGG + chr5_4:7022729-7022748 Msa0833940:intron 25.0%
!!! TTTGGAATGAGGATTTTTTA+GGG + chr5_4:7022730-7022749 Msa0833940:intron 25.0%
! AAAAACTCATGAATAGATGT+TGG + chr5_4:7022942-7022961 Msa0833940:intron 25.0%
! AAAACTCATGAATAGATGTT+GGG + chr5_4:7022943-7022962 Msa0833940:intron 25.0%
!! TTAAATTTTCTTGAGACAGA+GGG - chr5_4:7023332-7023351 None:intergenic 25.0%
! CTCAAGAAAATTTAAGTACA+AGG + chr5_4:7023337-7023356 Msa0833940:intron 25.0%
!! TGATATTTAAGATACATTGC+AGG + chr5_4:7023802-7023821 Msa0833940:intron 25.0%
! AAGAAAACAAAGAAGAAAGT+AGG + chr5_4:7024162-7024181 Msa0833940:CDS 25.0%
!!! AGATCTCCCTTAATTTTTTT+GGG + chr5_4:7024259-7024278 Msa0833940:three_prime_UTR 25.0%
! ACAAGACCCAAAAAAATTAA+GGG - chr5_4:7024268-7024287 None:intergenic 25.0%
! AACAAGACCCAAAAAAATTA+AGG - chr5_4:7024269-7024288 None:intergenic 25.0%
! ATAAGAGTAGTATTGAGGAA+TGG + chr5_4:7020648-7020667 Msa0833940:exon 30.0%
GGAATGGAAAACAAAAATGA+AGG + chr5_4:7020664-7020683 Msa0833940:exon 30.0%
!!! GTATTTACTGGTTTTGGAAT+CGG + chr5_4:7020733-7020752 Msa0833940:CDS 30.0%
AATTGGAAGAGAATAAGGAA+GGG - chr5_4:7020815-7020834 None:intergenic 30.0%
AAATTGGAAGAGAATAAGGA+AGG - chr5_4:7020816-7020835 None:intergenic 30.0%
TGTGAAATTGGAAGAGAATA+AGG - chr5_4:7020820-7020839 None:intergenic 30.0%
CTTCCAATTTCACATTACTA+TGG + chr5_4:7020826-7020845 Msa0833940:intron 30.0%
!!! TTTTTGAGTAGGGGAATTTT+GGG - chr5_4:7020885-7020904 None:intergenic 30.0%
!!! AGATACATGGTTTTTGAGTA+GGG - chr5_4:7020895-7020914 None:intergenic 30.0%
CTCATAACTTGATTCAACAT+CGG - chr5_4:7021029-7021048 None:intergenic 30.0%
TTCATATAGTTGAGGAAGAT+TGG + chr5_4:7021180-7021199 Msa0833940:intron 30.0%
! TGGTTTGAAAACCATTTTCA+TGG - chr5_4:7021552-7021571 None:intergenic 30.0%
AACAGTTCATAAAGCATAAG+GGG + chr5_4:7021602-7021621 Msa0833940:intron 30.0%
GTGGTAAAGAAAATATGGAA+AGG - chr5_4:7021918-7021937 None:intergenic 30.0%
TGAAGAATGTTCACAAAACA+TGG - chr5_4:7021988-7022007 None:intergenic 30.0%
! ACAAAGATGATGATGAAGTT+TGG + chr5_4:7022190-7022209 Msa0833940:CDS 30.0%
CACTTTATGCTTCACATAAA+TGG + chr5_4:7022631-7022650 Msa0833940:intron 30.0%
!!! AGGATTTTTTAGGGCTATAA+GGG + chr5_4:7022739-7022758 Msa0833940:intron 30.0%
! GCAAGAATCAAATTTTTCCT+AGG - chr5_4:7022867-7022886 None:intergenic 30.0%
!!! CATACTTTTCCAAAAGTGTT+TGG + chr5_4:7022886-7022905 Msa0833940:intron 30.0%
! TTTGGAAAACCAAACACTTT+TGG - chr5_4:7022898-7022917 None:intergenic 30.0%
AAACTCATGAATAGATGTTG+GGG + chr5_4:7022944-7022963 Msa0833940:intron 30.0%
!!! TTTTGGCGATAATGGAATTT+GGG + chr5_4:7022967-7022986 Msa0833940:intron 30.0%
!!! TTTTTTTCAAAACGGTATCC+TGG + chr5_4:7023093-7023112 Msa0833940:intron 30.0%
!!! TTTTTTCAAAACGGTATCCT+GGG + chr5_4:7023094-7023113 Msa0833940:intron 30.0%
! TAAATTTTCTTGAGACAGAG+GGG - chr5_4:7023331-7023350 None:intergenic 30.0%
! CTTAAATTTTCTTGAGACAG+AGG - chr5_4:7023333-7023352 None:intergenic 30.0%
TTGTTGAGACTGGAAAAATA+TGG + chr5_4:7023389-7023408 Msa0833940:intron 30.0%
!! TACTTTTTGGTGATTAACTG+TGG + chr5_4:7023543-7023562 Msa0833940:intron 30.0%
AGAGAACAAAATACTTCAGA+TGG + chr5_4:7023841-7023860 Msa0833940:CDS 30.0%
GTTTCAAAACCTATAACCAT+AGG - chr5_4:7023991-7024010 None:intergenic 30.0%
AAAAATTAAGGGAGATCTCA+CGG - chr5_4:7024257-7024276 None:intergenic 30.0%
!!! GAGATCTCCCTTAATTTTTT+TGG + chr5_4:7024258-7024277 Msa0833940:three_prime_UTR 30.0%
CCTATACTATATCCTGTAAT+TGG - chr5_4:7024324-7024343 None:intergenic 30.0%
CCAATTACAGGATATAGTAT+AGG + chr5_4:7024321-7024340 Msa0833940:three_prime_UTR 30.0%
ACTAATTAGCATTAGATGAC+AGG + chr5_4:7024380-7024399 Msa0833940:three_prime_UTR 30.0%
GAATCAATGGAAGCAATTGT+TGG - chr5_4:7020546-7020565 None:intergenic 35.0%
!!! GGACAAGTATTTACTGGTTT+TGG + chr5_4:7020727-7020746 Msa0833940:CDS 35.0%
GTTGGAAGCCCTTTAAATTT+AGG + chr5_4:7020775-7020794 Msa0833940:CDS 35.0%
!! TTTTGAGTAGGGGAATTTTG+GGG - chr5_4:7020884-7020903 None:intergenic 35.0%
!!! GTTTTTGAGTAGGGGAATTT+TGG - chr5_4:7020886-7020905 None:intergenic 35.0%
!!! GATACATGGTTTTTGAGTAG+GGG - chr5_4:7020894-7020913 None:intergenic 35.0%
!!! GAGATACATGGTTTTTGAGT+AGG - chr5_4:7020896-7020915 None:intergenic 35.0%
! ATCAAGTTATGAGTGCTACT+AGG + chr5_4:7021036-7021055 Msa0833940:CDS 35.0%
! TCAAGTTATGAGTGCTACTA+GGG + chr5_4:7021037-7021056 Msa0833940:CDS 35.0%
TGGAGCTAAGAATATTGAAG+TGG + chr5_4:7021200-7021219 Msa0833940:CDS 35.0%
GGAGCTAAGAATATTGAAGT+GGG + chr5_4:7021201-7021220 Msa0833940:CDS 35.0%
AAGAATATTGAAGTGGGTGT+TGG + chr5_4:7021207-7021226 Msa0833940:CDS 35.0%
! TTGAAAATTTTCCAGGAGGT+AGG + chr5_4:7021455-7021474 Msa0833940:intron 35.0%
AGTTATGCACTCCATGAAAA+TGG + chr5_4:7021538-7021557 Msa0833940:intron 35.0%
! AAATGGTTTTCAAACCACCT+CGG + chr5_4:7021555-7021574 Msa0833940:intron 35.0%
TTGAAGCAGAAGATGTTGTT+AGG + chr5_4:7021794-7021813 Msa0833940:intron 35.0%
TGAAGCAGAAGATGTTGTTA+GGG + chr5_4:7021795-7021814 Msa0833940:intron 35.0%
AAATATGGAAAGGATGGGAT+AGG - chr5_4:7021908-7021927 None:intergenic 35.0%
CATCTTTGTCATTGTCATCT+AGG - chr5_4:7022179-7022198 None:intergenic 35.0%
AGTTATCTCAAGGTCTAGTA+GGG + chr5_4:7022326-7022345 Msa0833940:intron 35.0%
! TCAACCAATGAACATTGGTT+TGG + chr5_4:7022351-7022370 Msa0833940:CDS 35.0%
AAAGCCAAACCAATGTTCAT+TGG - chr5_4:7022358-7022377 None:intergenic 35.0%
GCTTCAATGATCAGAAGAAA+AGG - chr5_4:7022553-7022572 None:intergenic 35.0%
!! ACCATTTTCCATTTGGAATG+AGG + chr5_4:7022719-7022738 Msa0833940:intron 35.0%
TCCTCATTCCAAATGGAAAA+TGG - chr5_4:7022723-7022742 None:intergenic 35.0%
!!! GAGGATTTTTTAGGGCTATA+AGG + chr5_4:7022738-7022757 Msa0833940:intron 35.0%
!!! ATTTTTTAGGGCTATAAGGG+AGG + chr5_4:7022742-7022761 Msa0833940:intron 35.0%
! ATGAATAGATGTTGGGGTTT+TGG + chr5_4:7022950-7022969 Msa0833940:intron 35.0%
!!! GTTTTGGCGATAATGGAATT+TGG + chr5_4:7022966-7022985 Msa0833940:intron 35.0%
! AATGTTCGCGTATTGTTTTC+AGG - chr5_4:7023230-7023249 None:intergenic 35.0%
GCTGTTTAAATTGTTGAGAC+TGG + chr5_4:7023379-7023398 Msa0833940:intron 35.0%
AAATATGGTTATCTGCTGAG+AGG + chr5_4:7023404-7023423 Msa0833940:intron 35.0%
! CTGTGTGACAATTTTAAACG+AGG + chr5_4:7023495-7023514 Msa0833940:intron 35.0%
TGGTGATTAACTGTGGTATT+TGG + chr5_4:7023550-7023569 Msa0833940:intron 35.0%
GGTGATTAACTGTGGTATTT+GGG + chr5_4:7023551-7023570 Msa0833940:intron 35.0%
CAGAAAAAACTCACGAAAGA+GGG - chr5_4:7023756-7023775 None:intergenic 35.0%
TCAGAAAAAACTCACGAAAG+AGG - chr5_4:7023757-7023776 None:intergenic 35.0%
! ATTTAAGATACATTGCAGGC+TGG + chr5_4:7023806-7023825 Msa0833940:intron 35.0%
!!! CTTGTTGATTTTTTTTGCGC+TGG + chr5_4:7023926-7023945 Msa0833940:intron 35.0%
CAAGTTCTTCAATCATTTGC+TGG - chr5_4:7024015-7024034 None:intergenic 35.0%
GCAAATGATTGAAGAACTTG+TGG + chr5_4:7024015-7024034 Msa0833940:CDS 35.0%
AATGATTGAAGAACTTGTGG+AGG + chr5_4:7024018-7024037 Msa0833940:CDS 35.0%
! AAACTTGAAGCTAGTTCTTC+AGG + chr5_4:7024094-7024113 Msa0833940:CDS 35.0%
CACTCAAAACAATCAGTACA+TGG - chr5_4:7024139-7024158 None:intergenic 35.0%
! ATGGGTTACTTACCAATTAC+AGG + chr5_4:7024309-7024328 Msa0833940:three_prime_UTR 35.0%
GCATTAGATGACAGGTATTT+AGG + chr5_4:7024388-7024407 Msa0833940:three_prime_UTR 35.0%
AGATGACAGGTATTTAGGAA+TGG + chr5_4:7024393-7024412 Msa0833940:three_prime_UTR 35.0%
TAGTAAAAGATACATGGGCA+AGG + chr5_4:7024465-7024484 Msa0833940:three_prime_UTR 35.0%
AGTAAAAGATACATGGGCAA+GGG + chr5_4:7024466-7024485 Msa0833940:three_prime_UTR 35.0%
GAAGAGAATAAGGAAGGGAA+AGG - chr5_4:7020810-7020829 None:intergenic 40.0%
! CAAGTTATGAGTGCTACTAG+GGG + chr5_4:7021038-7021057 Msa0833940:CDS 40.0%
!! ATGCATTTTCTGGTGTTAGC+AGG + chr5_4:7021069-7021088 Msa0833940:CDS 40.0%
! CAAGCCTTATCGCTTTAAGT+GGG + chr5_4:7021657-7021676 Msa0833940:intron 40.0%
! AAGCCTTATCGCTTTAAGTG+GGG + chr5_4:7021658-7021677 Msa0833940:intron 40.0%
TCTGCAGTATCCAGAGATTT+AGG - chr5_4:7021839-7021858 None:intergenic 40.0%
TCTTTACCACTTCATATGGG+TGG + chr5_4:7021928-7021947 Msa0833940:intron 40.0%
CATAATCCACCCATATGAAG+TGG - chr5_4:7021937-7021956 None:intergenic 40.0%
TGAATTTGATTCAACACCCC+AGG - chr5_4:7022062-7022081 None:intergenic 40.0%
TCCCAGTTTACCGTTTAATC+CGG + chr5_4:7022219-7022238 Msa0833940:CDS 40.0%
TCAGCTGATCAGTTATCTCA+AGG + chr5_4:7022316-7022335 Msa0833940:CDS 40.0%
CAGTTATCTCAAGGTCTAGT+AGG + chr5_4:7022325-7022344 Msa0833940:intron 40.0%
TCTGCAAAATCCACTGTTGA+AGG + chr5_4:7022453-7022472 Msa0833940:CDS 40.0%
CTGCAAAATCCACTGTTGAA+GGG + chr5_4:7022454-7022473 Msa0833940:CDS 40.0%
! TGCTGAGACCATTTTCCATT+TGG + chr5_4:7022712-7022731 Msa0833940:intron 40.0%
GAGAAGGTAGGCTAAAATTC+AGG + chr5_4:7022793-7022812 Msa0833940:intron 40.0%
!! GTGCCATTTGACTTGTATCA+CGG + chr5_4:7022839-7022858 Msa0833940:intron 40.0%
!! ATGAGTTGGTCATGTTGGTT+GGG + chr5_4:7023059-7023078 Msa0833940:intron 40.0%
!!! CTTGGTTTTTGGCCAAAACA+GGG + chr5_4:7023148-7023167 Msa0833940:intron 40.0%
!!! TTGGTTTTTGGCCAAAACAG+GGG + chr5_4:7023149-7023168 Msa0833940:intron 40.0%
AAAAACTCACGAAAGAGGGA+AGG - chr5_4:7023752-7023771 None:intergenic 40.0%
TTCCAAGTCTATCAGTGTTG+AGG - chr5_4:7023883-7023902 None:intergenic 40.0%
TGGAGGAAAATGAGAAGCTT+CGG + chr5_4:7024035-7024054 Msa0833940:CDS 40.0%
! AGAACTAGCTTCAAGTTTGC+TGG - chr5_4:7024092-7024111 None:intergenic 40.0%
CTTGCACGTTATCGCTTAAA+GGG + chr5_4:7024220-7024239 Msa0833940:three_prime_UTR 40.0%
TTGCACGTTATCGCTTAAAG+GGG + chr5_4:7024221-7024240 Msa0833940:three_prime_UTR 40.0%
TGGTAAGTAACCCATTAGCA+GGG - chr5_4:7024304-7024323 None:intergenic 40.0%
TTGGTAAGTAACCCATTAGC+AGG - chr5_4:7024305-7024324 None:intergenic 40.0%
GCGGTTACAGCTTGAATCAA+TGG - chr5_4:7020559-7020578 None:intergenic 45.0%
ATCGTATTCGTAGAACGTGG+CGG - chr5_4:7020578-7020597 None:intergenic 45.0%
AGCATCGTATTCGTAGAACG+TGG - chr5_4:7020581-7020600 None:intergenic 45.0%
! TGTTGCAGTGAGTTGAGTTG+AGG - chr5_4:7020604-7020623 None:intergenic 45.0%
!!! ACTGGTTTTGGAATCGGTTG+TGG + chr5_4:7020739-7020758 Msa0833940:CDS 45.0%
! TTTGGAATCGGTTGTGGAGT+TGG + chr5_4:7020745-7020764 Msa0833940:CDS 45.0%
!! ATCGGTTGTGGAGTTGGTAT+CGG + chr5_4:7020751-7020770 Msa0833940:CDS 45.0%
!! GGGGAATTTTGGGGAGATTT+GGG - chr5_4:7020875-7020894 None:intergenic 45.0%
!! AGGGGAATTTTGGGGAGATT+TGG - chr5_4:7020876-7020895 None:intergenic 45.0%
! GGTGCAACTGATGCATTTTC+TGG + chr5_4:7021059-7021078 Msa0833940:CDS 45.0%
!! ATTGAAGTGGGTGTTGGATG+TGG + chr5_4:7021213-7021232 Msa0833940:CDS 45.0%
! GTTGGATGTGGAGTTGGTTT+CGG + chr5_4:7021225-7021244 Msa0833940:CDS 45.0%
! TTCCAGGAGGTAGGTTTTTG+TGG + chr5_4:7021464-7021483 Msa0833940:intron 45.0%
TTCCACAAAAACCTACCTCC+TGG - chr5_4:7021469-7021488 None:intergenic 45.0%
CCACTTAAAGCGATAAGGCT+TGG - chr5_4:7021659-7021678 None:intergenic 45.0%
! CCAAGCCTTATCGCTTTAAG+TGG + chr5_4:7021656-7021675 Msa0833940:intron 45.0%
! CTTATCGCTTTAAGTGGGGT+CGG + chr5_4:7021662-7021681 Msa0833940:intron 45.0%
GTTCGAGGCATAGAACACTA+TGG - chr5_4:7021707-7021726 None:intergenic 45.0%
CCCGGATTAAACGGTAAACT+GGG - chr5_4:7022223-7022242 None:intergenic 45.0%
CCCAGTTTACCGTTTAATCC+GGG + chr5_4:7022220-7022239 Msa0833940:CDS 45.0%
ACCCGGATTAAACGGTAAAC+TGG - chr5_4:7022224-7022243 None:intergenic 45.0%
GGGTCTCAACCAATGAACAT+TGG + chr5_4:7022346-7022365 Msa0833940:intron 45.0%
!! GTCGGCTGAAGTGTCTTTTA+TGG - chr5_4:7022392-7022411 None:intergenic 45.0%
! ACTTCAGCCGACTCTACATA+TGG + chr5_4:7022400-7022419 Msa0833940:CDS 45.0%
TCGACTGCCATATGTAGAGT+CGG - chr5_4:7022410-7022429 None:intergenic 45.0%
ATATGGCAGTCGAACTGAGA+AGG + chr5_4:7022417-7022436 Msa0833940:CDS 45.0%
AATCCACTGTTGAAGGGAGA+AGG + chr5_4:7022460-7022479 Msa0833940:CDS 45.0%
!! TGAGAGCTTACTGATTCGCT+GGG - chr5_4:7022493-7022512 None:intergenic 45.0%
!! ATGAGAGCTTACTGATTCGC+TGG - chr5_4:7022494-7022513 None:intergenic 45.0%
TAGTGTGGAGATGAGAAGGT+AGG + chr5_4:7022781-7022800 Msa0833940:intron 45.0%
TCAAATGGCACAAAGCCCTT+TGG - chr5_4:7022830-7022849 None:intergenic 45.0%
GAGCCGTGATACAAGTCAAA+TGG - chr5_4:7022845-7022864 None:intergenic 45.0%
!! TGTTGGGGTTTTGGCGATAA+TGG + chr5_4:7022959-7022978 Msa0833940:intron 45.0%
!! TACTGGTATGGTGGGTAGAA+AGG + chr5_4:7023032-7023051 Msa0833940:intron 45.0%
GGTAGAAAGGATGGATGAGT+TGG + chr5_4:7023045-7023064 Msa0833940:intron 45.0%
!! GATGGATGAGTTGGTCATGT+TGG + chr5_4:7023054-7023073 Msa0833940:intron 45.0%
!! GATGAGTTGGTCATGTTGGT+TGG + chr5_4:7023058-7023077 Msa0833940:intron 45.0%
! TGGGGTTTTCTTTAACACCC+AGG - chr5_4:7023114-7023133 None:intergenic 45.0%
!! CTCCCTATGAGCTTGGTTTT+TGG + chr5_4:7023137-7023156 Msa0833940:intron 45.0%
GGCCAAAAACCAAGCTCATA+GGG - chr5_4:7023142-7023161 None:intergenic 45.0%
TGGCCAAAAACCAAGCTCAT+AGG - chr5_4:7023143-7023162 None:intergenic 45.0%
!!! GCTTGGTTTTTGGCCAAAAC+AGG + chr5_4:7023147-7023166 Msa0833940:intron 45.0%
! GATGCAACATTCCCCTGTTT+TGG - chr5_4:7023163-7023182 None:intergenic 45.0%
TAACAACAGACGATGCCTAC+AGG - chr5_4:7023473-7023492 None:intergenic 45.0%
GTCCTCAACACTGATAGACT+TGG + chr5_4:7023878-7023897 Msa0833940:intron 45.0%
!! CTAGCTTCAAGTTTGCTGGA+TGG - chr5_4:7024088-7024107 None:intergenic 45.0%
GCTTGCACGTTATCGCTTAA+AGG + chr5_4:7024219-7024238 Msa0833940:three_prime_UTR 45.0%
AAGGGAGATCTCACGGTTTA+GGG - chr5_4:7024250-7024269 None:intergenic 45.0%
TAAGGGAGATCTCACGGTTT+AGG - chr5_4:7024251-7024270 None:intergenic 45.0%
TACAAGTTGCCCCTGCTAAT+GGG + chr5_4:7024291-7024310 Msa0833940:three_prime_UTR 45.0%
GGTAAGTAACCCATTAGCAG+GGG - chr5_4:7024303-7024322 None:intergenic 45.0%
!! TGTGGAGTTGGTATCGGTGT+TGG + chr5_4:7020757-7020776 Msa0833940:CDS 50.0%
! TGTGGAGTTGGTTTCGGTCA+TGG + chr5_4:7021231-7021250 Msa0833940:CDS 50.0%
! GTTGGTTTCGGTCATGGTGT+TGG + chr5_4:7021237-7021256 Msa0833940:CDS 50.0%
! TTCGGTCATGGTGTTGGAGT+TGG + chr5_4:7021243-7021262 Msa0833940:CDS 50.0%
! TTTTCAAACCACCTCGGCAC+TGG + chr5_4:7021561-7021580 Msa0833940:intron 50.0%
CGACCCCACTTAAAGCGATA+AGG - chr5_4:7021664-7021683 None:intergenic 50.0%
TTTAAGTGGGGTCGGCTACA+AGG + chr5_4:7021670-7021689 Msa0833940:intron 50.0%
!! ACAGGACTTGCTGTGAAACC+TGG + chr5_4:7022041-7022060 Msa0833940:intron 50.0%
!! CAGGACTTGCTGTGAAACCT+GGG + chr5_4:7022042-7022061 Msa0833940:intron 50.0%
!! AGGACTTGCTGTGAAACCTG+GGG + chr5_4:7022043-7022062 Msa0833940:intron 50.0%
GGCAATGCACCCGGATTAAA+CGG - chr5_4:7022232-7022251 None:intergenic 50.0%
GTGGCACTTTGTAAGGATGC+TGG - chr5_4:7022253-7022272 None:intergenic 50.0%
! GCATCCTTACAAAGTGCCAC+AGG + chr5_4:7022253-7022272 Msa0833940:CDS 50.0%
TGCACCTGTGGCACTTTGTA+AGG - chr5_4:7022260-7022279 None:intergenic 50.0%
! CCACACTACGAGTTGGAACT+TGG - chr5_4:7022769-7022788 None:intergenic 50.0%
CCAAGTTCCAACTCGTAGTG+TGG + chr5_4:7022766-7022785 Msa0833940:intron 50.0%
CTCATCTCCACACTACGAGT+TGG - chr5_4:7022776-7022795 None:intergenic 50.0%
CTCGTAGTGTGGAGATGAGA+AGG + chr5_4:7022777-7022796 Msa0833940:intron 50.0%
TCAGGCAAAGTAGCCTCCAA+AGG + chr5_4:7022811-7022830 Msa0833940:intron 50.0%
CAGGCAAAGTAGCCTCCAAA+GGG + chr5_4:7022812-7022831 Msa0833940:intron 50.0%
AATGGCACAAAGCCCTTTGG+AGG - chr5_4:7022827-7022846 None:intergenic 50.0%
! TGACTTGTATCACGGCTCCT+AGG + chr5_4:7022847-7022866 Msa0833940:intron 50.0%
CACCACAATAGCAGCCATTG+CGG - chr5_4:7023008-7023027 None:intergenic 50.0%
!! TGCTATTGTGGTGGTGCTAC+TGG + chr5_4:7023015-7023034 Msa0833940:intron 50.0%
!! TTGTGGTGGTGCTACTGGTA+TGG + chr5_4:7023020-7023039 Msa0833940:intron 50.0%
!! GGTATGGTGGGTAGAAAGGA+TGG + chr5_4:7023036-7023055 Msa0833940:intron 50.0%
CAAGCTCATAGGGAGAGATG+GGG - chr5_4:7023132-7023151 None:intergenic 50.0%
CCAAGCTCATAGGGAGAGAT+GGG - chr5_4:7023133-7023152 None:intergenic 50.0%
ACCAAGCTCATAGGGAGAGA+TGG - chr5_4:7023134-7023153 None:intergenic 50.0%
TGCACATGTCCTCTTCCTGT+AGG + chr5_4:7023455-7023474 Msa0833940:intron 50.0%
ACTCACGAAAGAGGGAAGGT+GGG - chr5_4:7023748-7023767 None:intergenic 50.0%
AACTCACGAAAGAGGGAAGG+TGG - chr5_4:7023749-7023768 None:intergenic 50.0%
GCTTCGGCAGATACTAGTGA+AGG + chr5_4:7024051-7024070 Msa0833940:CDS 50.0%
AGGGAGATCTCACGGTTTAG+GGG - chr5_4:7024249-7024268 None:intergenic 50.0%
CATTAGCAGGGGCAACTTGT+AGG - chr5_4:7024292-7024311 None:intergenic 50.0%
CTACAAGTTGCCCCTGCTAA+TGG + chr5_4:7024290-7024309 Msa0833940:three_prime_UTR 50.0%
TACATGGGCAAGGGTCTGTT+TGG + chr5_4:7024475-7024494 Msa0833940:three_prime_UTR 50.0%
AAGGGTCTGTTTGGTTGGAG+AGG + chr5_4:7024484-7024503 Msa0833940:three_prime_UTR 50.0%
!! GTGGGTGTTGGATGTGGAGT+TGG + chr5_4:7021219-7021238 Msa0833940:CDS 55.0%
AATTGTAGCCTCCAGTGCCG+AGG - chr5_4:7021575-7021594 None:intergenic 55.0%
! TTGTTAGGGTGCCACAACCG+CGG + chr5_4:7021809-7021828 Msa0833940:intron 55.0%
ATTTAGGCATGCCGCGGTTG+TGG - chr5_4:7021823-7021842 None:intergenic 55.0%
CCAGAGATTTAGGCATGCCG+CGG - chr5_4:7021829-7021848 None:intergenic 55.0%
AAGGATGCTGGCAATGCACC+CGG - chr5_4:7022241-7022260 None:intergenic 55.0%
TCCAGAACTGACTGCACCTG+TGG - chr5_4:7022272-7022291 None:intergenic 55.0%
CCTCCTTCTCCCTTCAACAG+TGG - chr5_4:7022466-7022485 None:intergenic 55.0%
CCACTGTTGAAGGGAGAAGG+AGG + chr5_4:7022463-7022482 Msa0833940:CDS 55.0%
CTGTTGAAGGGAGAAGGAGG+AGG + chr5_4:7022466-7022485 Msa0833940:CDS 55.0%
ACAGCAATCGCAAGCCGCAA+TGG + chr5_4:7022991-7023010 Msa0833940:intron 55.0%
AGCCGCAATGGCTGCTATTG+TGG + chr5_4:7023003-7023022 Msa0833940:intron 55.0%
CGCAATGGCTGCTATTGTGG+TGG + chr5_4:7023006-7023025 Msa0833940:intron 55.0%
!! TGGTGGTGCTACTGGTATGG+TGG + chr5_4:7023023-7023042 Msa0833940:intron 55.0%
!! GGTGGTGCTACTGGTATGGT+GGG + chr5_4:7023024-7023043 Msa0833940:intron 55.0%
CCCATCTCTCCCTATGAGCT+TGG + chr5_4:7023130-7023149 Msa0833940:intron 55.0%
CAGACGATGCCTACAGGAAG+AGG - chr5_4:7023467-7023486 None:intergenic 55.0%
CTCACGAAAGAGGGAAGGTG+GGG - chr5_4:7023747-7023766 None:intergenic 55.0%
TGGGCAAGGGTCTGTTTGGT+TGG + chr5_4:7024479-7024498 Msa0833940:three_prime_UTR 55.0%
! TCAAACCACCTCGGCACTGG+AGG + chr5_4:7021564-7021583 Msa0833940:intron 60.0%
CCGCGGCATGCCTAAATCTC+TGG + chr5_4:7021826-7021845 Msa0833940:intron 60.0%
GCCACAGGTGCAGTCAGTTC+TGG + chr5_4:7022268-7022287 Msa0833940:CDS 60.0%
! TGTAGCCTCCAGTGCCGAGG+TGG - chr5_4:7021572-7021591 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 7020529 7024516 7020529 ID=Msa0833940;Name=Msa0833940
chr5_4 mRNA 7020529 7024516 7020529 ID=Msa0833940-mRNA-1;Parent=Msa0833940;Name=Msa0833940-mRNA-1;_AED=0.18;_eAED=0.18;_QI=138|0.85|0.75|1|0.71|0.75|8|333|292
chr5_4 exon 7020529 7020796 7020529 ID=Msa0833940-mRNA-1:exon:3095;Parent=Msa0833940-mRNA-1
chr5_4 exon 7021018 7021106 7021018 ID=Msa0833940-mRNA-1:exon:3096;Parent=Msa0833940-mRNA-1
chr5_4 exon 7021189 7021264 7021189 ID=Msa0833940-mRNA-1:exon:3097;Parent=Msa0833940-mRNA-1
chr5_4 exon 7022045 7022094 7022045 ID=Msa0833940-mRNA-1:exon:3098;Parent=Msa0833940-mRNA-1
chr5_4 exon 7022181 7022337 7022181 ID=Msa0833940-mRNA-1:exon:3099;Parent=Msa0833940-mRNA-1
chr5_4 exon 7022347 7022501 7022347 ID=Msa0833940-mRNA-1:exon:3100;Parent=Msa0833940-mRNA-1
chr5_4 exon 7023824 7023862 7023824 ID=Msa0833940-mRNA-1:exon:3101;Parent=Msa0833940-mRNA-1
chr5_4 exon 7024001 7024516 7024001 ID=Msa0833940-mRNA-1:exon:3102;Parent=Msa0833940-mRNA-1
chr5_4 five_prime_UTR 7020529 7020666 7020529 ID=Msa0833940-mRNA-1:five_prime_utr;Parent=Msa0833940-mRNA-1
chr5_4 CDS 7020667 7020796 7020667 ID=Msa0833940-mRNA-1:cds;Parent=Msa0833940-mRNA-1
chr5_4 CDS 7021018 7021106 7021018 ID=Msa0833940-mRNA-1:cds;Parent=Msa0833940-mRNA-1
chr5_4 CDS 7021189 7021264 7021189 ID=Msa0833940-mRNA-1:cds;Parent=Msa0833940-mRNA-1
chr5_4 CDS 7022045 7022094 7022045 ID=Msa0833940-mRNA-1:cds;Parent=Msa0833940-mRNA-1
chr5_4 CDS 7022181 7022337 7022181 ID=Msa0833940-mRNA-1:cds;Parent=Msa0833940-mRNA-1
chr5_4 CDS 7022347 7022501 7022347 ID=Msa0833940-mRNA-1:cds;Parent=Msa0833940-mRNA-1
chr5_4 CDS 7023824 7023862 7023824 ID=Msa0833940-mRNA-1:cds;Parent=Msa0833940-mRNA-1
chr5_4 CDS 7024001 7024183 7024001 ID=Msa0833940-mRNA-1:cds;Parent=Msa0833940-mRNA-1
chr5_4 three_prime_UTR 7024184 7024516 7024184 ID=Msa0833940-mRNA-1:three_prime_utr;Parent=Msa0833940-mRNA-1
Gene Sequence

>Msa0833940

ATGGAAAACAAAAATGAAGGAAATGAAATTCGATTTTCGAATCCATTTACTTTGAAATTTGGACAAGTATTTACTGGTTTTGGAATCGGTTGTGGAGTTGGTATCGGTGTTGGAAGCCCTTTAAATTTAGGTGCAATACCGATGTTGAATCAAGTTATGAGTGCTACTAGGGGTGCAACTGATGCATTTTCTGGTGTTAGCAGGCATGTTAATACTTCTTTGAGGAAGATTGGAGCTAAGAATATTGAAGTGGGTGTTGGATGTGGAGTTGGTTTCGGTCATGGTGTTGGAGTTGGACTTGCTGTGAAACCTGGGGTGTTGAATCAAATTCAATCATGTCTCGTAATGACAATGACAAAGATGATGATGAAGTTTGGAATTACTCCCAGTTTACCGTTTAATCCGGGTGCATTGCCAGCATCCTTACAAAGTGCCACAGGTGCAGTCAGTTCTGGAAGCGTGACACAGTTAGCAACTAAATCAGCTGATCAGTTATCTCAAGGGTCTCAACCAATGAACATTGGTTTGGCTTTTGATAAAACTGCCATAAAAGACACTTCAGCCGACTCTACATATGGCAGTCGAACTGAGAAGGTTCTTAACAATTTTCTGCAAAATCCACTGTTGAAGGGAGAAGGAGGAGGACCCAGCGAATCAGCTGGACGTTTGATCACAGAGAACAAAATACTTCAGATGGTTTTGAAACACCAGCAAATGATTGAAGAACTTGTGGAGGAAAATGAGAAGCTTCGGCAGATACTAGTGAAGGAGCTGAAAGTTCCATCCAGCAAACTTGAAGCTAGTTCTTCAGGTAGAATTAGAAATAAGTTGCCATGTACTGATTGTTTTGAGTGTCGAAGAAAACAAAGAAGAAAGTAG

Protein sequence

>Msa0833940

MENKNEGNEIRFSNPFTLKFGQVFTGFGIGCGVGIGVGSPLNLGAIPMLNQVMSATRGATDAFSGVSRHVNTSLRKIGAKNIEVGVGCGVGFGHGVGVGLAVKPGVLNQIQSCLVMTMTKMMMKFGITPSLPFNPGALPASLQSATGAVSSGSVTQLATKSADQLSQGSQPMNIGLAFDKTAIKDTSADSTYGSRTEKVLNNFLQNPLLKGEGGGPSESAGRLITENKILQMVLKHQQMIEELVEENEKLRQILVKELKVPSSKLEASSSGRIRNKLPCTDCFECRRKQRRK*