AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0754860


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0754860 MtrunA17_Chr5g0399691 93.040 273 16 1 1 270 1 273 2.82e-157 440
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0754860 AT4G17540.1 45.714 280 123 5 10 285 28 282 3.96e-65 206

Find 101 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCCATTTACTTTGAAATT+TGG 0.141463 5_2:+8554518 Msa0754860:CDS
TGTCCAAATTTCAAAGTAAA+TGG 0.158302 5_2:-8554521 None:intergenic
GCATTAGATGACAGGTATTT+AGG 0.201098 5_2:+8558208 Msa0754860:three_prime_UTR
GTTGGAAGCCCTTTAAATTT+AGG 0.210875 5_2:+8554587 Msa0754860:CDS
GGACAAGTATTTACTGGTTT+TGG 0.211578 5_2:+8554539 Msa0754860:CDS
TAAGGGAGATCTCACGGTTT+AGG 0.233689 5_2:-8558068 None:intergenic
GCTTGCACGTTATCGCTTAA+AGG 0.246676 5_2:+8558039 Msa0754860:three_prime_UTR
AGAGTAGTACCTAAATTTAA+AGG 0.274370 5_2:-8554596 None:intergenic
CCTATACTATATCCTGTAAT+TGG 0.287565 5_2:-8558141 None:intergenic
AAGGGAGATCTCACGGTTTA+GGG 0.290126 5_2:-8558067 None:intergenic
ATGGGTTACTTACCAATTAC+AGG 0.311687 5_2:+8558129 Msa0754860:three_prime_UTR
CAGTCTGAGAAATTTGATTC+TGG 0.317467 5_2:+8554318 None:intergenic
GCCACAGGTGCAGTCAGTTC+TGG 0.319464 5_2:+8556082 Msa0754860:CDS
TTCATATAGTTGAGGAAGAT+TGG 0.320215 5_2:+8554993 Msa0754860:intron
AAATTTGGACAAGTATTTAC+TGG 0.322518 5_2:+8554533 Msa0754860:CDS
CAAGTTCTTCAATCATTTGC+TGG 0.323313 5_2:-8557832 None:intergenic
CTACAAGTTGCCCCTGCTAA+TGG 0.340138 5_2:+8558110 Msa0754860:three_prime_UTR
GTTGGATGTGGAGTTGGTTT+CGG 0.345001 5_2:+8555038 Msa0754860:CDS
CTTGCACGTTATCGCTTAAA+GGG 0.350496 5_2:+8558040 Msa0754860:three_prime_UTR
ACAAAGATGATGATGAAGTT+TGG 0.354809 5_2:+8556004 Msa0754860:CDS
ACCCGGATTAAACGGTAAAC+TGG 0.357165 5_2:-8556035 None:intergenic
AGAACTAGCTTCAAGTTTGC+TGG 0.358017 5_2:-8557909 None:intergenic
TCCCAGTTTACCGTTTAATC+CGG 0.367717 5_2:+8556033 Msa0754860:CDS
TACAAGTTGCCCCTGCTAAT+GGG 0.377837 5_2:+8558111 Msa0754860:three_prime_UTR
TTGGTTGGAGAGGAGTAAAA+TGG 0.387600 5_2:+8558314 Msa0754860:three_prime_UTR
AAACTTGAAGCTAGTTCTTC+AGG 0.400339 5_2:+8557914 Msa0754860:CDS
TCAACCAATGAACATTGGTT+TGG 0.414979 5_2:+8556165 Msa0754860:CDS
TACATGGGCAAGGGTCTGTT+TGG 0.419304 5_2:+8558295 Msa0754860:three_prime_UTR
TCTGCAAAATCCACTGTTGA+AGG 0.419732 5_2:+8556267 Msa0754860:CDS
AAAGCCAAACCAATGTTCAT+TGG 0.422194 5_2:-8556169 None:intergenic
TGCACCTGTGGCACTTTGTA+AGG 0.422373 5_2:-8556071 None:intergenic
AGTCAAGCTGCTTGAATCAA+TGG 0.423047 5_2:-8554360 None:intergenic
GAGTAGTACCTAAATTTAAA+GGG 0.424503 5_2:-8554595 None:intergenic
GTGGGTGTTGGATGTGGAGT+TGG 0.433318 5_2:+8555032 Msa0754860:CDS
GGCAATGCACCCGGATTAAA+CGG 0.440473 5_2:-8556043 None:intergenic
CATTAGCAGGGGCAACTTGT+AGG 0.443920 5_2:-8558109 None:intergenic
ATCAAGTTATGAGTGCTACT+AGG 0.451482 5_2:+8554849 Msa0754860:CDS
TTTGGAATCGGTTGTGGAGT+TGG 0.458433 5_2:+8554557 Msa0754860:CDS
ATGAGAGCTTACTGATTCGC+TGG 0.460415 5_2:-8556305 None:intergenic
TCAAGTTATGAGTGCTACTA+GGG 0.471040 5_2:+8554850 Msa0754860:CDS
TTGGTAAGTAACCCATTAGC+AGG 0.472572 5_2:-8558122 None:intergenic
TGTGGAGTTGGTTTCGGTCA+TGG 0.472934 5_2:+8555044 Msa0754860:CDS
ACAGGACTTGCTGTGAAACC+TGG 0.477065 5_2:+8555855 Msa0754860:intron
CCAATTACAGGATATAGTAT+AGG 0.478483 5_2:+8558141 Msa0754860:three_prime_UTR
GAATCAATGGAAGCAATTGT+TGG 0.479648 5_2:-8554347 None:intergenic
GTTGGTTTCGGTCATGGTGT+TGG 0.481887 5_2:+8555050 Msa0754860:CDS
ATTGAAGTGGGTGTTGGATG+TGG 0.485704 5_2:+8555026 Msa0754860:CDS
TGGAGGAAAATGAGAAGCTT+CGG 0.486885 5_2:+8557855 Msa0754860:CDS
CCTCCTTCTCCCTTCAACAG+TGG 0.488432 5_2:-8556277 None:intergenic
TGGGCAAGGGTCTGTTTGGT+TGG 0.489899 5_2:+8558299 Msa0754860:three_prime_UTR
AAAAGATAAGAGTAGTATTG+AGG 0.494638 5_2:+8554455 Msa0754860:five_prime_UTR
AAGGGTCTGTTTGGTTGGAG+AGG 0.496557 5_2:+8558304 Msa0754860:three_prime_UTR
ACTTCAGCCGACTCTACATA+TGG 0.500649 5_2:+8556214 Msa0754860:CDS
TGTGGAGTTGGTATCGGTGT+TGG 0.502325 5_2:+8554569 Msa0754860:CDS
TTCGGTCATGGTGTTGGAGT+TGG 0.502955 5_2:+8555056 Msa0754860:CDS
CCCAGTTTACCGTTTAATCC+GGG 0.504429 5_2:+8556034 Msa0754860:CDS
TGAATTTGATTCAACACCCC+AGG 0.508485 5_2:-8555873 None:intergenic
ACTAATTAGCATTAGATGAC+AGG 0.510013 5_2:+8558200 Msa0754860:three_prime_UTR
AAGAAAACAAAGAAGAAAGT+AGG 0.525920 5_2:+8557982 Msa0754860:CDS
CACTCAAAACAATCAGTACA+TGG 0.527145 5_2:-8557956 None:intergenic
CTGCAAAATCCACTGTTGAA+GGG 0.528070 5_2:+8556268 Msa0754860:CDS
AAGAATATTGAAGTGGGTGT+TGG 0.528611 5_2:+8555020 Msa0754860:CDS
ATCGGTTGTGGAGTTGGTAT+CGG 0.538819 5_2:+8554563 Msa0754860:CDS
ATAAGAGTAGTATTGAGGAA+TGG 0.547460 5_2:+8554460 Msa0754860:exon
AGATGACAGGTATTTAGGAA+TGG 0.555064 5_2:+8558213 Msa0754860:three_prime_UTR
CCCGGATTAAACGGTAAACT+GGG 0.556288 5_2:-8556034 None:intergenic
GCAAATGATTGAAGAACTTG+TGG 0.559081 5_2:+8557835 Msa0754860:CDS
AAGGATGCTGGCAATGCACC+CGG 0.560291 5_2:-8556052 None:intergenic
CAGGACTTGCTGTGAAACCT+GGG 0.561209 5_2:+8555856 Msa0754860:intron
AGAGAACAAAATACTTCAGA+TGG 0.561726 5_2:+8557661 Msa0754860:CDS
ATAATATAGTAAAAGATACA+TGG 0.562231 5_2:+8558279 Msa0754860:three_prime_UTR
TAGTAAAAGATACATGGGCA+AGG 0.571477 5_2:+8558285 Msa0754860:three_prime_UTR
TCCAGAACTGACTGCACCTG+TGG 0.578803 5_2:-8556083 None:intergenic
TGGTAAGTAACCCATTAGCA+GGG 0.583261 5_2:-8558121 None:intergenic
CTAGCTTCAAGTTTGCTGGA+TGG 0.583563 5_2:-8557905 None:intergenic
TGAGAGCTTACTGATTCGCT+GGG 0.586043 5_2:-8556304 None:intergenic
GTGGCACTTTGTAAGGATGC+TGG 0.588800 5_2:-8556064 None:intergenic
AATCCACTGTTGAAGGGAGA+AGG 0.589188 5_2:+8556274 Msa0754860:CDS
GCATCCTTACAAAGTGCCAC+AGG 0.589278 5_2:+8556067 Msa0754860:CDS
TCAGCTGATCAGTTATCTCA+AGG 0.590242 5_2:+8556130 Msa0754860:CDS
GTTGGAGAGGAGTAAAATGG+AGG 0.596132 5_2:+8558317 Msa0754860:three_prime_UTR
ATATGGCAGTCGAACTGAGA+AGG 0.597072 5_2:+8556231 Msa0754860:CDS
TGGAGCTAAGAATATTGAAG+TGG 0.597204 5_2:+8555013 Msa0754860:CDS
CCACTGTTGAAGGGAGAAGG+AGG 0.603974 5_2:+8556277 Msa0754860:CDS
GGAGCTAAGAATATTGAAGT+GGG 0.605534 5_2:+8555014 Msa0754860:CDS
AGTAAAAGATACATGGGCAA+GGG 0.606431 5_2:+8558286 Msa0754860:three_prime_UTR
AATGATTGAAGAACTTGTGG+AGG 0.616671 5_2:+8557838 Msa0754860:CDS
TAATATAGTAAAAGATACAT+GGG 0.620520 5_2:+8558280 Msa0754860:three_prime_UTR
CTGTTGAAGGGAGAAGGAGG+AGG 0.623525 5_2:+8556280 Msa0754860:CDS
TCGACTGCCATATGTAGAGT+CGG 0.624499 5_2:-8556221 None:intergenic
GGGTCTCAACCAATGAACAT+TGG 0.632984 5_2:+8556160 Msa0754860:intron
GCTTCGGCAGATACTAGTGA+AGG 0.640377 5_2:+8557871 Msa0754860:CDS
TGTTGCAGTGAGTTGAGTTG+AGG 0.643118 5_2:-8554413 None:intergenic
CTCATAACTTGATTCAACAT+CGG 0.655826 5_2:-8554839 None:intergenic
TTGCACGTTATCGCTTAAAG+GGG 0.660290 5_2:+8558041 Msa0754860:three_prime_UTR
AGGGAGATCTCACGGTTTAG+GGG 0.678296 5_2:-8558066 None:intergenic
GGTAAGTAACCCATTAGCAG+GGG 0.690059 5_2:-8558120 None:intergenic
AGGACTTGCTGTGAAACCTG+GGG 0.707838 5_2:+8555857 Msa0754860:intron
CAAGTTATGAGTGCTACTAG+GGG 0.719794 5_2:+8554851 Msa0754860:CDS
ATCGTATTCGTAGAACGTGG+CGG 0.735634 5_2:-8554387 None:intergenic
AGCATCGTATTCGTAGAACG+TGG 0.739027 5_2:-8554390 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+TGG - chr5_2:8557499-8557518 None:intergenic 0.0%
!! AAAAAAAAAAAAAGTGAAAA+AGG - chr5_2:8554737-8554756 None:intergenic 10.0%
!!! AATTTTACAAAATACTATTT+TGG - chr5_2:8556730-8556749 None:intergenic 10.0%
!!! TATTGTTATTTTTTTCAAAA+CGG + chr5_2:8556899-8556918 Msa0754860:intron 10.0%
!!! ATTATTTCTTAATTTTTCTT+GGG - chr5_2:8558264-8558283 None:intergenic 10.0%
!!! TATTATTTCTTAATTTTTCT+TGG - chr5_2:8558265-8558284 None:intergenic 10.0%
!!! TTTTGAATTATTGATCATTT+AGG + chr5_2:8555177-8555196 Msa0754860:intron 15.0%
!!! TTTTCTTTTATTATTATGAC+AGG + chr5_2:8555837-8555856 Msa0754860:intron 15.0%
!!! TTGTTTCTTTATATACTTTT+TGG + chr5_2:8557344-8557363 Msa0754860:intron 15.0%
!!! TGTTTATTTATTTTTTCCTA+TGG + chr5_2:8557792-8557811 Msa0754860:intron 15.0%
!! ATAATATAGTAAAAGATACA+TGG + chr5_2:8558279-8558298 Msa0754860:three_prime_UTR 15.0%
!! TAATATAGTAAAAGATACAT+GGG + chr5_2:8558280-8558299 Msa0754860:three_prime_UTR 15.0%
!!! AATCCATTTACTTTGAAATT+TGG + chr5_2:8554518-8554537 Msa0754860:CDS 20.0%
!! TTGTAACTTTAAGTGTATTT+AGG + chr5_2:8555150-8555169 Msa0754860:intron 20.0%
!! TGTAACTTTAAGTGTATTTA+GGG + chr5_2:8555151-8555170 Msa0754860:intron 20.0%
!!! CGAATTTTTTTAGATCATTT+AGG + chr5_2:8555230-8555249 Msa0754860:intron 20.0%
!!! CATAATATTGAAAATTTTCC+AGG + chr5_2:8555262-8555281 Msa0754860:intron 20.0%
!!! TCTATTCATGAGTTTTTTTT+GGG - chr5_2:8556753-8556772 None:intergenic 20.0%
!!! ATCTATTCATGAGTTTTTTT+TGG - chr5_2:8556754-8556773 None:intergenic 20.0%
!! TTTCAAATATCACATTTGTT+TGG + chr5_2:8557105-8557124 Msa0754860:intron 20.0%
!!! TTATTTTTTCCTATGGTTAT+AGG + chr5_2:8557799-8557818 Msa0754860:intron 20.0%
! AAAAGATAAGAGTAGTATTG+AGG + chr5_2:8554455-8554474 Msa0754860:five_prime_UTR 25.0%
! TGTCCAAATTTCAAAGTAAA+TGG - chr5_2:8554524-8554543 None:intergenic 25.0%
! AAATTTGGACAAGTATTTAC+TGG + chr5_2:8554533-8554552 Msa0754860:CDS 25.0%
! GAGTAGTACCTAAATTTAAA+GGG - chr5_2:8554598-8554617 None:intergenic 25.0%
! AGAGTAGTACCTAAATTTAA+AGG - chr5_2:8554599-8554618 None:intergenic 25.0%
! AATCCATAGTAATGTGAAAT+TGG - chr5_2:8554644-8554663 None:intergenic 25.0%
! TTTCACATTACTATGGATTT+CGG + chr5_2:8554645-8554664 Msa0754860:intron 25.0%
! AAAAGGTAATAAGAGATACA+TGG - chr5_2:8554720-8554739 None:intergenic 25.0%
!!! TCTTATTCTGAATTTGTTGT+AGG + chr5_2:8554809-8554828 Msa0754860:intron 25.0%
!!! ACTTGTTTTTCATATAGTTG+AGG + chr5_2:8554985-8555004 Msa0754860:intron 25.0%
! TGAATTATTGATCATTTAGG+AGG + chr5_2:8555180-8555199 Msa0754860:intron 25.0%
!! AATATTGAAAATTTTCCAGG+AGG + chr5_2:8555265-8555284 Msa0754860:intron 25.0%
! ATCTATGATCTATAATACAC+AGG - chr5_2:8555325-8555344 None:intergenic 25.0%
! ATAACAGTTCATAAAGCATA+AGG + chr5_2:8555414-8555433 Msa0754860:intron 25.0%
! TAACAGTTCATAAAGCATAA+GGG + chr5_2:8555415-8555434 Msa0754860:intron 25.0%
!!! GTTTTTTAATATACAGTTCG+AGG - chr5_2:8555536-8555555 None:intergenic 25.0%
! AAAGAAAATATGGAAAGGAT+GGG - chr5_2:8555727-8555746 None:intergenic 25.0%
! TAAAGAAAATATGGAAAGGA+TGG - chr5_2:8555728-8555747 None:intergenic 25.0%
! ATGAAGTGGTAAAGAAAATA+TGG - chr5_2:8555737-8555756 None:intergenic 25.0%
!! ATTTTCTTTACCACTTCATA+TGG + chr5_2:8555738-8555757 Msa0754860:intron 25.0%
!! TTTTCTTTACCACTTCATAT+GGG + chr5_2:8555739-8555758 Msa0754860:intron 25.0%
! TTAAACATGAGATACACAAA+AGG - chr5_2:8555959-8555978 None:intergenic 25.0%
! TAAAAAATCCTCATTCCAAA+TGG - chr5_2:8556544-8556563 None:intergenic 25.0%
!!! ATTTGGAATGAGGATTTTTT+AGG + chr5_2:8556543-8556562 Msa0754860:intron 25.0%
!!! TTTGGAATGAGGATTTTTTA+GGG + chr5_2:8556544-8556563 Msa0754860:intron 25.0%
! AAAAACTCATGAATAGATGT+TGG + chr5_2:8556756-8556775 Msa0754860:intron 25.0%
! AAAACTCATGAATAGATGTT+GGG + chr5_2:8556757-8556776 Msa0754860:intron 25.0%
!! TTAAATTTTCTTGAGACAGA+GGG - chr5_2:8557146-8557165 None:intergenic 25.0%
! CTCAAGAAAATTTAAGTACA+AGG + chr5_2:8557151-8557170 Msa0754860:intron 25.0%
!! TGATATTTAAGATACATTGC+AGG + chr5_2:8557622-8557641 Msa0754860:intron 25.0%
! AAGAAAACAAAGAAGAAAGT+AGG + chr5_2:8557982-8558001 Msa0754860:CDS 25.0%
!!! AGATCTCCCTTAATTTTTTT+GGG + chr5_2:8558079-8558098 Msa0754860:three_prime_UTR 25.0%
! ACAAGACCCAAAAAAATTAA+GGG - chr5_2:8558088-8558107 None:intergenic 25.0%
! AACAAGACCCAAAAAAATTA+AGG - chr5_2:8558089-8558108 None:intergenic 25.0%
! ATAAGAGTAGTATTGAGGAA+TGG + chr5_2:8554460-8554479 Msa0754860:exon 30.0%
GGAATGGAAAACAAAAATGA+AGG + chr5_2:8554476-8554495 Msa0754860:exon 30.0%
!!! GTATTTACTGGTTTTGGAAT+CGG + chr5_2:8554545-8554564 Msa0754860:CDS 30.0%
AATTGGAAGAGAATAAGGAA+GGG - chr5_2:8554627-8554646 None:intergenic 30.0%
AAATTGGAAGAGAATAAGGA+AGG - chr5_2:8554628-8554647 None:intergenic 30.0%
TGTGAAATTGGAAGAGAATA+AGG - chr5_2:8554632-8554651 None:intergenic 30.0%
CTTCCAATTTCACATTACTA+TGG + chr5_2:8554638-8554657 Msa0754860:intron 30.0%
!!! TTTTTGAGTAGGGGAATTTT+GGG - chr5_2:8554697-8554716 None:intergenic 30.0%
!!! AGATACATGGTTTTTGAGTA+GGG - chr5_2:8554707-8554726 None:intergenic 30.0%
CTCATAACTTGATTCAACAT+CGG - chr5_2:8554842-8554861 None:intergenic 30.0%
TTCATATAGTTGAGGAAGAT+TGG + chr5_2:8554993-8555012 Msa0754860:intron 30.0%
! TGGTTTGAAAACCATTTTCA+TGG - chr5_2:8555366-8555385 None:intergenic 30.0%
AACAGTTCATAAAGCATAAG+GGG + chr5_2:8555416-8555435 Msa0754860:intron 30.0%
GTGGTAAAGAAAATATGGAA+AGG - chr5_2:8555732-8555751 None:intergenic 30.0%
TGAAGAATGTTCACAAAACA+TGG - chr5_2:8555802-8555821 None:intergenic 30.0%
! ACAAAGATGATGATGAAGTT+TGG + chr5_2:8556004-8556023 Msa0754860:CDS 30.0%
CACTTTATGCTTCACATAAA+TGG + chr5_2:8556445-8556464 Msa0754860:intron 30.0%
!!! AGGATTTTTTAGGGCTATAA+GGG + chr5_2:8556553-8556572 Msa0754860:intron 30.0%
! GCAAGAATCAAATTTTTCCT+AGG - chr5_2:8556681-8556700 None:intergenic 30.0%
!!! CATACTTTTCCAAAAGTGTT+TGG + chr5_2:8556700-8556719 Msa0754860:intron 30.0%
! TTTGGAAAACCAAACACTTT+TGG - chr5_2:8556712-8556731 None:intergenic 30.0%
AAACTCATGAATAGATGTTG+GGG + chr5_2:8556758-8556777 Msa0754860:intron 30.0%
!!! TTTTGGCGATAATGGAATTT+GGG + chr5_2:8556781-8556800 Msa0754860:intron 30.0%
!!! TTTTTTTCAAAACGGTATCC+TGG + chr5_2:8556907-8556926 Msa0754860:intron 30.0%
!!! TTTTTTCAAAACGGTATCCT+GGG + chr5_2:8556908-8556927 Msa0754860:intron 30.0%
! TAAATTTTCTTGAGACAGAG+GGG - chr5_2:8557145-8557164 None:intergenic 30.0%
! CTTAAATTTTCTTGAGACAG+AGG - chr5_2:8557147-8557166 None:intergenic 30.0%
TTGTTGAGACTGGAAAAATA+TGG + chr5_2:8557203-8557222 Msa0754860:intron 30.0%
!! TACTTTTTGGTGATTAACTG+TGG + chr5_2:8557357-8557376 Msa0754860:intron 30.0%
AGAGAACAAAATACTTCAGA+TGG + chr5_2:8557661-8557680 Msa0754860:CDS 30.0%
GTTTCAAAACCTATAACCAT+AGG - chr5_2:8557811-8557830 None:intergenic 30.0%
AAAAATTAAGGGAGATCTCA+CGG - chr5_2:8558077-8558096 None:intergenic 30.0%
!!! GAGATCTCCCTTAATTTTTT+TGG + chr5_2:8558078-8558097 Msa0754860:three_prime_UTR 30.0%
CCTATACTATATCCTGTAAT+TGG - chr5_2:8558144-8558163 None:intergenic 30.0%
CCAATTACAGGATATAGTAT+AGG + chr5_2:8558141-8558160 Msa0754860:three_prime_UTR 30.0%
ACTAATTAGCATTAGATGAC+AGG + chr5_2:8558200-8558219 Msa0754860:three_prime_UTR 30.0%
GAATCAATGGAAGCAATTGT+TGG - chr5_2:8554350-8554369 None:intergenic 35.0%
!!! GGACAAGTATTTACTGGTTT+TGG + chr5_2:8554539-8554558 Msa0754860:CDS 35.0%
GTTGGAAGCCCTTTAAATTT+AGG + chr5_2:8554587-8554606 Msa0754860:CDS 35.0%
!! TTTTGAGTAGGGGAATTTTG+GGG - chr5_2:8554696-8554715 None:intergenic 35.0%
!!! GTTTTTGAGTAGGGGAATTT+TGG - chr5_2:8554698-8554717 None:intergenic 35.0%
!!! GATACATGGTTTTTGAGTAG+GGG - chr5_2:8554706-8554725 None:intergenic 35.0%
!!! GAGATACATGGTTTTTGAGT+AGG - chr5_2:8554708-8554727 None:intergenic 35.0%
! ATCAAGTTATGAGTGCTACT+AGG + chr5_2:8554849-8554868 Msa0754860:CDS 35.0%
! TCAAGTTATGAGTGCTACTA+GGG + chr5_2:8554850-8554869 Msa0754860:CDS 35.0%
TGGAGCTAAGAATATTGAAG+TGG + chr5_2:8555013-8555032 Msa0754860:CDS 35.0%
GGAGCTAAGAATATTGAAGT+GGG + chr5_2:8555014-8555033 Msa0754860:CDS 35.0%
AAGAATATTGAAGTGGGTGT+TGG + chr5_2:8555020-8555039 Msa0754860:CDS 35.0%
! TTGAAAATTTTCCAGGAGGT+AGG + chr5_2:8555269-8555288 Msa0754860:intron 35.0%
AGTTATGCACTCCATGAAAA+TGG + chr5_2:8555352-8555371 Msa0754860:intron 35.0%
! AAATGGTTTTCAAACCACCT+CGG + chr5_2:8555369-8555388 Msa0754860:intron 35.0%
TTGAAGCAGAAGATGTTGTT+AGG + chr5_2:8555608-8555627 Msa0754860:intron 35.0%
TGAAGCAGAAGATGTTGTTA+GGG + chr5_2:8555609-8555628 Msa0754860:intron 35.0%
AAATATGGAAAGGATGGGAT+AGG - chr5_2:8555722-8555741 None:intergenic 35.0%
CATCTTTGTCATTGTCATCT+AGG - chr5_2:8555993-8556012 None:intergenic 35.0%
AGTTATCTCAAGGTCTAGTA+GGG + chr5_2:8556140-8556159 Msa0754860:intron 35.0%
! TCAACCAATGAACATTGGTT+TGG + chr5_2:8556165-8556184 Msa0754860:CDS 35.0%
AAAGCCAAACCAATGTTCAT+TGG - chr5_2:8556172-8556191 None:intergenic 35.0%
GCTTCAATGATCAGAAGAAA+AGG - chr5_2:8556367-8556386 None:intergenic 35.0%
!! ACCATTTTCCATTTGGAATG+AGG + chr5_2:8556533-8556552 Msa0754860:intron 35.0%
TCCTCATTCCAAATGGAAAA+TGG - chr5_2:8556537-8556556 None:intergenic 35.0%
!!! GAGGATTTTTTAGGGCTATA+AGG + chr5_2:8556552-8556571 Msa0754860:intron 35.0%
!!! ATTTTTTAGGGCTATAAGGG+AGG + chr5_2:8556556-8556575 Msa0754860:intron 35.0%
! ATGAATAGATGTTGGGGTTT+TGG + chr5_2:8556764-8556783 Msa0754860:intron 35.0%
!!! GTTTTGGCGATAATGGAATT+TGG + chr5_2:8556780-8556799 Msa0754860:intron 35.0%
! AATGTTCGCGTATTGTTTTC+AGG - chr5_2:8557044-8557063 None:intergenic 35.0%
GCTGTTTAAATTGTTGAGAC+TGG + chr5_2:8557193-8557212 Msa0754860:intron 35.0%
AAATATGGTTATCTGCTGAG+AGG + chr5_2:8557218-8557237 Msa0754860:intron 35.0%
! CTGTGTGACAATTTTAAACG+AGG + chr5_2:8557309-8557328 Msa0754860:intron 35.0%
TGGTGATTAACTGTGGTATT+TGG + chr5_2:8557364-8557383 Msa0754860:intron 35.0%
GGTGATTAACTGTGGTATTT+GGG + chr5_2:8557365-8557384 Msa0754860:intron 35.0%
CAGAAAAAACTCACGAAAGA+GGG - chr5_2:8557576-8557595 None:intergenic 35.0%
TCAGAAAAAACTCACGAAAG+AGG - chr5_2:8557577-8557596 None:intergenic 35.0%
! ATTTAAGATACATTGCAGGC+TGG + chr5_2:8557626-8557645 Msa0754860:intron 35.0%
!!! CTTGTTGATTTTTTTTGCGC+TGG + chr5_2:8557746-8557765 Msa0754860:intron 35.0%
CAAGTTCTTCAATCATTTGC+TGG - chr5_2:8557835-8557854 None:intergenic 35.0%
GCAAATGATTGAAGAACTTG+TGG + chr5_2:8557835-8557854 Msa0754860:CDS 35.0%
AATGATTGAAGAACTTGTGG+AGG + chr5_2:8557838-8557857 Msa0754860:CDS 35.0%
! AAACTTGAAGCTAGTTCTTC+AGG + chr5_2:8557914-8557933 Msa0754860:CDS 35.0%
CACTCAAAACAATCAGTACA+TGG - chr5_2:8557959-8557978 None:intergenic 35.0%
! ATGGGTTACTTACCAATTAC+AGG + chr5_2:8558129-8558148 Msa0754860:three_prime_UTR 35.0%
GCATTAGATGACAGGTATTT+AGG + chr5_2:8558208-8558227 Msa0754860:three_prime_UTR 35.0%
AGATGACAGGTATTTAGGAA+TGG + chr5_2:8558213-8558232 Msa0754860:three_prime_UTR 35.0%
TAGTAAAAGATACATGGGCA+AGG + chr5_2:8558285-8558304 Msa0754860:three_prime_UTR 35.0%
AGTAAAAGATACATGGGCAA+GGG + chr5_2:8558286-8558305 Msa0754860:three_prime_UTR 35.0%
AGTCAAGCTGCTTGAATCAA+TGG - chr5_2:8554363-8554382 None:intergenic 40.0%
GAAGAGAATAAGGAAGGGAA+AGG - chr5_2:8554622-8554641 None:intergenic 40.0%
! CAAGTTATGAGTGCTACTAG+GGG + chr5_2:8554851-8554870 Msa0754860:CDS 40.0%
!! ATGCATTTTCTGGTGTTAGC+AGG + chr5_2:8554882-8554901 Msa0754860:CDS 40.0%
! CAAGCCTTATCGCTTTAAGT+GGG + chr5_2:8555471-8555490 Msa0754860:intron 40.0%
! AAGCCTTATCGCTTTAAGTG+GGG + chr5_2:8555472-8555491 Msa0754860:intron 40.0%
TCTGCAGTATCCAGAGATTT+AGG - chr5_2:8555653-8555672 None:intergenic 40.0%
TCTTTACCACTTCATATGGG+TGG + chr5_2:8555742-8555761 Msa0754860:intron 40.0%
CATAATCCACCCATATGAAG+TGG - chr5_2:8555751-8555770 None:intergenic 40.0%
TGAATTTGATTCAACACCCC+AGG - chr5_2:8555876-8555895 None:intergenic 40.0%
TCCCAGTTTACCGTTTAATC+CGG + chr5_2:8556033-8556052 Msa0754860:CDS 40.0%
TCAGCTGATCAGTTATCTCA+AGG + chr5_2:8556130-8556149 Msa0754860:CDS 40.0%
CAGTTATCTCAAGGTCTAGT+AGG + chr5_2:8556139-8556158 Msa0754860:intron 40.0%
TCTGCAAAATCCACTGTTGA+AGG + chr5_2:8556267-8556286 Msa0754860:CDS 40.0%
CTGCAAAATCCACTGTTGAA+GGG + chr5_2:8556268-8556287 Msa0754860:CDS 40.0%
! TGCTGAGACCATTTTCCATT+TGG + chr5_2:8556526-8556545 Msa0754860:intron 40.0%
GAGAAGGTAGGCTAAAATTC+AGG + chr5_2:8556607-8556626 Msa0754860:intron 40.0%
!! GTGCCATTTGACTTGTATCA+CGG + chr5_2:8556653-8556672 Msa0754860:intron 40.0%
!! ATGAGTTGGTCATGTTGGTT+GGG + chr5_2:8556873-8556892 Msa0754860:intron 40.0%
!!! CTTGGTTTTTGGCCAAAACA+GGG + chr5_2:8556962-8556981 Msa0754860:intron 40.0%
!!! TTGGTTTTTGGCCAAAACAG+GGG + chr5_2:8556963-8556982 Msa0754860:intron 40.0%
AAAAACTCACGAAAGAGGGA+AGG - chr5_2:8557572-8557591 None:intergenic 40.0%
TTCCAAGTCTATCAGTGTTG+AGG - chr5_2:8557703-8557722 None:intergenic 40.0%
TGGAGGAAAATGAGAAGCTT+CGG + chr5_2:8557855-8557874 Msa0754860:CDS 40.0%
! AGAACTAGCTTCAAGTTTGC+TGG - chr5_2:8557912-8557931 None:intergenic 40.0%
CTTGCACGTTATCGCTTAAA+GGG + chr5_2:8558040-8558059 Msa0754860:three_prime_UTR 40.0%
TTGCACGTTATCGCTTAAAG+GGG + chr5_2:8558041-8558060 Msa0754860:three_prime_UTR 40.0%
TGGTAAGTAACCCATTAGCA+GGG - chr5_2:8558124-8558143 None:intergenic 40.0%
TTGGTAAGTAACCCATTAGC+AGG - chr5_2:8558125-8558144 None:intergenic 40.0%
ATCGTATTCGTAGAACGTGG+CGG - chr5_2:8554390-8554409 None:intergenic 45.0%
AGCATCGTATTCGTAGAACG+TGG - chr5_2:8554393-8554412 None:intergenic 45.0%
! TGTTGCAGTGAGTTGAGTTG+AGG - chr5_2:8554416-8554435 None:intergenic 45.0%
!!! ACTGGTTTTGGAATCGGTTG+TGG + chr5_2:8554551-8554570 Msa0754860:CDS 45.0%
! TTTGGAATCGGTTGTGGAGT+TGG + chr5_2:8554557-8554576 Msa0754860:CDS 45.0%
!! ATCGGTTGTGGAGTTGGTAT+CGG + chr5_2:8554563-8554582 Msa0754860:CDS 45.0%
!! GGGGAATTTTGGGGAGATTT+GGG - chr5_2:8554687-8554706 None:intergenic 45.0%
!! AGGGGAATTTTGGGGAGATT+TGG - chr5_2:8554688-8554707 None:intergenic 45.0%
! GGTGCAACTGATGCATTTTC+TGG + chr5_2:8554872-8554891 Msa0754860:CDS 45.0%
!! ATTGAAGTGGGTGTTGGATG+TGG + chr5_2:8555026-8555045 Msa0754860:CDS 45.0%
! GTTGGATGTGGAGTTGGTTT+CGG + chr5_2:8555038-8555057 Msa0754860:CDS 45.0%
! TTCCAGGAGGTAGGTTTTTG+TGG + chr5_2:8555278-8555297 Msa0754860:intron 45.0%
TTCCACAAAAACCTACCTCC+TGG - chr5_2:8555283-8555302 None:intergenic 45.0%
CCACTTAAAGCGATAAGGCT+TGG - chr5_2:8555473-8555492 None:intergenic 45.0%
! CCAAGCCTTATCGCTTTAAG+TGG + chr5_2:8555470-8555489 Msa0754860:intron 45.0%
! CTTATCGCTTTAAGTGGGGT+CGG + chr5_2:8555476-8555495 Msa0754860:intron 45.0%
GTTCGAGGCATAGAACACTA+TGG - chr5_2:8555521-8555540 None:intergenic 45.0%
CCCGGATTAAACGGTAAACT+GGG - chr5_2:8556037-8556056 None:intergenic 45.0%
CCCAGTTTACCGTTTAATCC+GGG + chr5_2:8556034-8556053 Msa0754860:CDS 45.0%
ACCCGGATTAAACGGTAAAC+TGG - chr5_2:8556038-8556057 None:intergenic 45.0%
GGGTCTCAACCAATGAACAT+TGG + chr5_2:8556160-8556179 Msa0754860:intron 45.0%
!! GTCGGCTGAAGTGTCTTTTA+TGG - chr5_2:8556206-8556225 None:intergenic 45.0%
! ACTTCAGCCGACTCTACATA+TGG + chr5_2:8556214-8556233 Msa0754860:CDS 45.0%
TCGACTGCCATATGTAGAGT+CGG - chr5_2:8556224-8556243 None:intergenic 45.0%
ATATGGCAGTCGAACTGAGA+AGG + chr5_2:8556231-8556250 Msa0754860:CDS 45.0%
AATCCACTGTTGAAGGGAGA+AGG + chr5_2:8556274-8556293 Msa0754860:CDS 45.0%
!! TGAGAGCTTACTGATTCGCT+GGG - chr5_2:8556307-8556326 None:intergenic 45.0%
!! ATGAGAGCTTACTGATTCGC+TGG - chr5_2:8556308-8556327 None:intergenic 45.0%
TAGTGTGGAGATGAGAAGGT+AGG + chr5_2:8556595-8556614 Msa0754860:intron 45.0%
TCAAATGGCACAAAGCCCTT+TGG - chr5_2:8556644-8556663 None:intergenic 45.0%
GAGCCGTGATACAAGTCAAA+TGG - chr5_2:8556659-8556678 None:intergenic 45.0%
!! TGTTGGGGTTTTGGCGATAA+TGG + chr5_2:8556773-8556792 Msa0754860:intron 45.0%
!! TACTGGTATGGTGGGTAGAA+AGG + chr5_2:8556846-8556865 Msa0754860:intron 45.0%
GGTAGAAAGGATGGATGAGT+TGG + chr5_2:8556859-8556878 Msa0754860:intron 45.0%
!! GATGGATGAGTTGGTCATGT+TGG + chr5_2:8556868-8556887 Msa0754860:intron 45.0%
!! GATGAGTTGGTCATGTTGGT+TGG + chr5_2:8556872-8556891 Msa0754860:intron 45.0%
! TGGGGTTTTCTTTAACACCC+AGG - chr5_2:8556928-8556947 None:intergenic 45.0%
!! CTCCCTATGAGCTTGGTTTT+TGG + chr5_2:8556951-8556970 Msa0754860:intron 45.0%
GGCCAAAAACCAAGCTCATA+GGG - chr5_2:8556956-8556975 None:intergenic 45.0%
TGGCCAAAAACCAAGCTCAT+AGG - chr5_2:8556957-8556976 None:intergenic 45.0%
!!! GCTTGGTTTTTGGCCAAAAC+AGG + chr5_2:8556961-8556980 Msa0754860:intron 45.0%
! GATGCAACATTCCCCTGTTT+TGG - chr5_2:8556977-8556996 None:intergenic 45.0%
TAACAACAGACGATGCCTAC+AGG - chr5_2:8557287-8557306 None:intergenic 45.0%
GTCCTCAACACTGATAGACT+TGG + chr5_2:8557698-8557717 Msa0754860:intron 45.0%
!! CTAGCTTCAAGTTTGCTGGA+TGG - chr5_2:8557908-8557927 None:intergenic 45.0%
GCTTGCACGTTATCGCTTAA+AGG + chr5_2:8558039-8558058 Msa0754860:three_prime_UTR 45.0%
AAGGGAGATCTCACGGTTTA+GGG - chr5_2:8558070-8558089 None:intergenic 45.0%
TAAGGGAGATCTCACGGTTT+AGG - chr5_2:8558071-8558090 None:intergenic 45.0%
TACAAGTTGCCCCTGCTAAT+GGG + chr5_2:8558111-8558130 Msa0754860:three_prime_UTR 45.0%
GGTAAGTAACCCATTAGCAG+GGG - chr5_2:8558123-8558142 None:intergenic 45.0%
!! TGTGGAGTTGGTATCGGTGT+TGG + chr5_2:8554569-8554588 Msa0754860:CDS 50.0%
! TGTGGAGTTGGTTTCGGTCA+TGG + chr5_2:8555044-8555063 Msa0754860:CDS 50.0%
! GTTGGTTTCGGTCATGGTGT+TGG + chr5_2:8555050-8555069 Msa0754860:CDS 50.0%
! TTCGGTCATGGTGTTGGAGT+TGG + chr5_2:8555056-8555075 Msa0754860:CDS 50.0%
! TTTTCAAACCACCTCGGCAC+TGG + chr5_2:8555375-8555394 Msa0754860:intron 50.0%
CGACCCCACTTAAAGCGATA+AGG - chr5_2:8555478-8555497 None:intergenic 50.0%
TTTAAGTGGGGTCGGCTACA+AGG + chr5_2:8555484-8555503 Msa0754860:intron 50.0%
!! ACAGGACTTGCTGTGAAACC+TGG + chr5_2:8555855-8555874 Msa0754860:intron 50.0%
!! CAGGACTTGCTGTGAAACCT+GGG + chr5_2:8555856-8555875 Msa0754860:intron 50.0%
!! AGGACTTGCTGTGAAACCTG+GGG + chr5_2:8555857-8555876 Msa0754860:intron 50.0%
GGCAATGCACCCGGATTAAA+CGG - chr5_2:8556046-8556065 None:intergenic 50.0%
GTGGCACTTTGTAAGGATGC+TGG - chr5_2:8556067-8556086 None:intergenic 50.0%
! GCATCCTTACAAAGTGCCAC+AGG + chr5_2:8556067-8556086 Msa0754860:CDS 50.0%
TGCACCTGTGGCACTTTGTA+AGG - chr5_2:8556074-8556093 None:intergenic 50.0%
! CCACACTACGAGTTGGAACT+TGG - chr5_2:8556583-8556602 None:intergenic 50.0%
CCAAGTTCCAACTCGTAGTG+TGG + chr5_2:8556580-8556599 Msa0754860:intron 50.0%
CTCATCTCCACACTACGAGT+TGG - chr5_2:8556590-8556609 None:intergenic 50.0%
CTCGTAGTGTGGAGATGAGA+AGG + chr5_2:8556591-8556610 Msa0754860:intron 50.0%
TCAGGCAAAGTAGCCTCCAA+AGG + chr5_2:8556625-8556644 Msa0754860:intron 50.0%
CAGGCAAAGTAGCCTCCAAA+GGG + chr5_2:8556626-8556645 Msa0754860:intron 50.0%
AATGGCACAAAGCCCTTTGG+AGG - chr5_2:8556641-8556660 None:intergenic 50.0%
! TGACTTGTATCACGGCTCCT+AGG + chr5_2:8556661-8556680 Msa0754860:intron 50.0%
CACCACAATAGCAGCCATTG+CGG - chr5_2:8556822-8556841 None:intergenic 50.0%
!! TGCTATTGTGGTGGTGCTAC+TGG + chr5_2:8556829-8556848 Msa0754860:intron 50.0%
!! TTGTGGTGGTGCTACTGGTA+TGG + chr5_2:8556834-8556853 Msa0754860:intron 50.0%
!! GGTATGGTGGGTAGAAAGGA+TGG + chr5_2:8556850-8556869 Msa0754860:intron 50.0%
CAAGCTCATAGGGAGAGATG+GGG - chr5_2:8556946-8556965 None:intergenic 50.0%
CCAAGCTCATAGGGAGAGAT+GGG - chr5_2:8556947-8556966 None:intergenic 50.0%
ACCAAGCTCATAGGGAGAGA+TGG - chr5_2:8556948-8556967 None:intergenic 50.0%
TGCACATGTCCTCTTCCTGT+AGG + chr5_2:8557269-8557288 Msa0754860:intron 50.0%
ACTCACGAAAGAGGGAAGGT+GGG - chr5_2:8557568-8557587 None:intergenic 50.0%
AACTCACGAAAGAGGGAAGG+TGG - chr5_2:8557569-8557588 None:intergenic 50.0%
GCTTCGGCAGATACTAGTGA+AGG + chr5_2:8557871-8557890 Msa0754860:CDS 50.0%
AGGGAGATCTCACGGTTTAG+GGG - chr5_2:8558069-8558088 None:intergenic 50.0%
CATTAGCAGGGGCAACTTGT+AGG - chr5_2:8558112-8558131 None:intergenic 50.0%
CTACAAGTTGCCCCTGCTAA+TGG + chr5_2:8558110-8558129 Msa0754860:three_prime_UTR 50.0%
TACATGGGCAAGGGTCTGTT+TGG + chr5_2:8558295-8558314 Msa0754860:three_prime_UTR 50.0%
AAGGGTCTGTTTGGTTGGAG+AGG + chr5_2:8558304-8558323 Msa0754860:three_prime_UTR 50.0%
!! GTGGGTGTTGGATGTGGAGT+TGG + chr5_2:8555032-8555051 Msa0754860:CDS 55.0%
AATTGTAGCCTCCAGTGCCG+AGG - chr5_2:8555389-8555408 None:intergenic 55.0%
! TTGTTAGGGTGCCACAACCG+CGG + chr5_2:8555623-8555642 Msa0754860:intron 55.0%
ATTTAGGCATGCCGCGGTTG+TGG - chr5_2:8555637-8555656 None:intergenic 55.0%
CCAGAGATTTAGGCATGCCG+CGG - chr5_2:8555643-8555662 None:intergenic 55.0%
AAGGATGCTGGCAATGCACC+CGG - chr5_2:8556055-8556074 None:intergenic 55.0%
TCCAGAACTGACTGCACCTG+TGG - chr5_2:8556086-8556105 None:intergenic 55.0%
CCTCCTTCTCCCTTCAACAG+TGG - chr5_2:8556280-8556299 None:intergenic 55.0%
CCACTGTTGAAGGGAGAAGG+AGG + chr5_2:8556277-8556296 Msa0754860:CDS 55.0%
CTGTTGAAGGGAGAAGGAGG+AGG + chr5_2:8556280-8556299 Msa0754860:CDS 55.0%
ACAGCAATCGCAAGCCGCAA+TGG + chr5_2:8556805-8556824 Msa0754860:intron 55.0%
AGCCGCAATGGCTGCTATTG+TGG + chr5_2:8556817-8556836 Msa0754860:intron 55.0%
CGCAATGGCTGCTATTGTGG+TGG + chr5_2:8556820-8556839 Msa0754860:intron 55.0%
!! TGGTGGTGCTACTGGTATGG+TGG + chr5_2:8556837-8556856 Msa0754860:intron 55.0%
!! GGTGGTGCTACTGGTATGGT+GGG + chr5_2:8556838-8556857 Msa0754860:intron 55.0%
CCCATCTCTCCCTATGAGCT+TGG + chr5_2:8556944-8556963 Msa0754860:intron 55.0%
CAGACGATGCCTACAGGAAG+AGG - chr5_2:8557281-8557300 None:intergenic 55.0%
CTCACGAAAGAGGGAAGGTG+GGG - chr5_2:8557567-8557586 None:intergenic 55.0%
TGGGCAAGGGTCTGTTTGGT+TGG + chr5_2:8558299-8558318 Msa0754860:three_prime_UTR 55.0%
! TCAAACCACCTCGGCACTGG+AGG + chr5_2:8555378-8555397 Msa0754860:intron 60.0%
CCGCGGCATGCCTAAATCTC+TGG + chr5_2:8555640-8555659 Msa0754860:intron 60.0%
GCCACAGGTGCAGTCAGTTC+TGG + chr5_2:8556082-8556101 Msa0754860:CDS 60.0%
! TGTAGCCTCCAGTGCCGAGG+TGG - chr5_2:8555386-8555405 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 8554333 8558336 8554333 ID=Msa0754860;Name=Msa0754860
chr5_2 mRNA 8554333 8558336 8554333 ID=Msa0754860-mRNA-1;Parent=Msa0754860;Name=Msa0754860-mRNA-1;_AED=0.18;_eAED=0.18;_QI=146|0.85|0.75|1|0.71|0.75|8|333|292
chr5_2 exon 8554333 8554608 8554333 ID=Msa0754860-mRNA-1:exon:3863;Parent=Msa0754860-mRNA-1
chr5_2 exon 8554831 8554919 8554831 ID=Msa0754860-mRNA-1:exon:3864;Parent=Msa0754860-mRNA-1
chr5_2 exon 8555002 8555077 8555002 ID=Msa0754860-mRNA-1:exon:3865;Parent=Msa0754860-mRNA-1
chr5_2 exon 8555859 8555908 8555859 ID=Msa0754860-mRNA-1:exon:3866;Parent=Msa0754860-mRNA-1
chr5_2 exon 8555995 8556151 8555995 ID=Msa0754860-mRNA-1:exon:3867;Parent=Msa0754860-mRNA-1
chr5_2 exon 8556161 8556315 8556161 ID=Msa0754860-mRNA-1:exon:3868;Parent=Msa0754860-mRNA-1
chr5_2 exon 8557644 8557682 8557644 ID=Msa0754860-mRNA-1:exon:3869;Parent=Msa0754860-mRNA-1
chr5_2 exon 8557821 8558336 8557821 ID=Msa0754860-mRNA-1:exon:3870;Parent=Msa0754860-mRNA-1
chr5_2 five_prime_UTR 8554333 8554478 8554333 ID=Msa0754860-mRNA-1:five_prime_utr;Parent=Msa0754860-mRNA-1
chr5_2 CDS 8554479 8554608 8554479 ID=Msa0754860-mRNA-1:cds;Parent=Msa0754860-mRNA-1
chr5_2 CDS 8554831 8554919 8554831 ID=Msa0754860-mRNA-1:cds;Parent=Msa0754860-mRNA-1
chr5_2 CDS 8555002 8555077 8555002 ID=Msa0754860-mRNA-1:cds;Parent=Msa0754860-mRNA-1
chr5_2 CDS 8555859 8555908 8555859 ID=Msa0754860-mRNA-1:cds;Parent=Msa0754860-mRNA-1
chr5_2 CDS 8555995 8556151 8555995 ID=Msa0754860-mRNA-1:cds;Parent=Msa0754860-mRNA-1
chr5_2 CDS 8556161 8556315 8556161 ID=Msa0754860-mRNA-1:cds;Parent=Msa0754860-mRNA-1
chr5_2 CDS 8557644 8557682 8557644 ID=Msa0754860-mRNA-1:cds;Parent=Msa0754860-mRNA-1
chr5_2 CDS 8557821 8558003 8557821 ID=Msa0754860-mRNA-1:cds;Parent=Msa0754860-mRNA-1
chr5_2 three_prime_UTR 8558004 8558336 8558004 ID=Msa0754860-mRNA-1:three_prime_utr;Parent=Msa0754860-mRNA-1
Gene Sequence

>Msa0754860

ATGGAAAACAAAAATGAAGGAAATGAAATTCGATTTTCGAATCCATTTACTTTGAAATTTGGACAAGTATTTACTGGTTTTGGAATCGGTTGTGGAGTTGGTATCGGTGTTGGAAGCCCTTTAAATTTAGGTGCAATACCGATGTTGAATCAAGTTATGAGTGCTACTAGGGGTGCAACTGATGCATTTTCTGGTGTTAGCAGGCATGTTAATACTTCTTTGAGGAAGATTGGAGCTAAGAATATTGAAGTGGGTGTTGGATGTGGAGTTGGTTTCGGTCATGGTGTTGGAGTTGGACTTGCTGTGAAACCTGGGGTGTTGAATCAAATTCAATCATGTCTCGTAATGACAATGACAAAGATGATGATGAAGTTTGGAATTACTCCCAGTTTACCGTTTAATCCGGGTGCATTGCCAGCATCCTTACAAAGTGCCACAGGTGCAGTCAGTTCTGGAAGCGTGACACAGTTAGCAACTAAATCAGCTGATCAGTTATCTCAAGGGTCTCAACCAATGAACATTGGTTTGGCTTTTGATAAAACTGCCATAAAAGACACTTCAGCCGACTCTACATATGGCAGTCGAACTGAGAAGGTTCTTAACAATTTTCTGCAAAATCCACTGTTGAAGGGAGAAGGAGGAGGACCCAGCGAATCAGCTGGACGTTTGATCACAGAGAACAAAATACTTCAGATGGTTTTGAAACACCAGCAAATGATTGAAGAACTTGTGGAGGAAAATGAGAAGCTTCGGCAGATACTAGTGAAGGAGCTGAAAGTTCCATCCAGCAAACTTGAAGCTAGTTCTTCAGGTAGAATTAGAAATAAGTTGCCATGTACTGATTGTTTTGAGTGTCGAAGAAAACAAAGAAGAAAGTAG

Protein sequence

>Msa0754860

MENKNEGNEIRFSNPFTLKFGQVFTGFGIGCGVGIGVGSPLNLGAIPMLNQVMSATRGATDAFSGVSRHVNTSLRKIGAKNIEVGVGCGVGFGHGVGVGLAVKPGVLNQIQSCLVMTMTKMMMKFGITPSLPFNPGALPASLQSATGAVSSGSVTQLATKSADQLSQGSQPMNIGLAFDKTAIKDTSADSTYGSRTEKVLNNFLQNPLLKGEGGGPSESAGRLITENKILQMVLKHQQMIEELVEENEKLRQILVKELKVPSSKLEASSSGRIRNKLPCTDCFECRRKQRRK*