Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0754860 | XP_013453441.1 | 92.881 | 295 | 18 | 1 | 1 | 292 | 1 | 295 | 7.18e-171 | 484 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0754860 | A0A072UNQ3 | 92.881 | 295 | 18 | 1 | 1 | 292 | 1 | 295 | 3.43e-171 | 484 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0003470 | Msa0754860 | 0.817324 | 3.498942e-52 | -8.615850e-47 |
Msa0008850 | Msa0754860 | 0.847233 | 1.316704e-59 | -8.615850e-47 |
Msa0011720 | Msa0754860 | 0.802241 | 6.159065e-49 | -8.615850e-47 |
Msa0011850 | Msa0754860 | 0.804791 | 1.823352e-49 | -8.615850e-47 |
Msa0017120 | Msa0754860 | 0.835740 | 1.407224e-56 | -8.615850e-47 |
Msa0020630 | Msa0754860 | 0.822779 | 1.973518e-53 | -8.615850e-47 |
Msa0024680 | Msa0754860 | 0.813597 | 2.361534e-51 | -8.615850e-47 |
Msa0027540 | Msa0754860 | 0.835911 | 1.273986e-56 | -8.615850e-47 |
Msa0030000 | Msa0754860 | 0.838825 | 2.283988e-57 | -8.615850e-47 |
Msa0030730 | Msa0754860 | 0.807646 | 4.565352e-50 | -8.615850e-47 |
Msa0031940 | Msa0754860 | 0.806854 | 6.720601e-50 | -8.615850e-47 |
Msa0037820 | Msa0754860 | 0.802540 | 5.344282e-49 | -8.615850e-47 |
Msa0038310 | Msa0754860 | 0.810758 | 9.831641e-51 | -8.615850e-47 |
Msa0044710 | Msa0754860 | 0.814346 | 1.614895e-51 | -8.615850e-47 |
Msa0050570 | Msa0754860 | 0.800596 | 1.337911e-48 | -8.615850e-47 |
Msa0055280 | Msa0754860 | 0.817662 | 2.936227e-52 | -8.615850e-47 |
Msa0056040 | Msa0754860 | 0.830443 | 2.927968e-55 | -8.615850e-47 |
Msa0060350 | Msa0754860 | 0.801910 | 7.204116e-49 | -8.615850e-47 |
Msa0060600 | Msa0754860 | 0.819817 | 9.517738e-53 | -8.615850e-47 |
Msa0065390 | Msa0754860 | 0.825799 | 3.849777e-54 | -8.615850e-47 |
Msa0068410 | Msa0754860 | 0.806442 | 8.208332e-50 | -8.615850e-47 |
Msa0075310 | Msa0754860 | 0.837458 | 5.137628e-57 | -8.615850e-47 |
Msa0079250 | Msa0754860 | 0.814155 | 1.779493e-51 | -8.615850e-47 |
Msa0083160 | Msa0754860 | 0.803792 | 2.944033e-49 | -8.615850e-47 |
Msa0084680 | Msa0754860 | 0.833299 | 5.776085e-56 | -8.615850e-47 |
Msa0087110 | Msa0754860 | 0.813697 | 2.245146e-51 | -8.615850e-47 |
Msa0089210 | Msa0754860 | 0.821255 | 4.448740e-53 | -8.615850e-47 |
Msa0091770 | Msa0754860 | 0.832066 | 1.168224e-55 | -8.615850e-47 |
Msa0094420 | Msa0754860 | 0.815979 | 7.004082e-52 | -8.615850e-47 |
Msa0101060 | Msa0754860 | 0.807272 | 5.480190e-50 | -8.615850e-47 |
Msa0103060 | Msa0754860 | 0.813296 | 2.750818e-51 | -8.615850e-47 |
Msa0105340 | Msa0754860 | 0.820645 | 6.149678e-53 | -8.615850e-47 |
Msa0105420 | Msa0754860 | 0.821690 | 3.530838e-53 | -8.615850e-47 |
Msa0110710 | Msa0754860 | 0.828266 | 9.892959e-55 | -8.615850e-47 |
Msa0114250 | Msa0754860 | 0.807727 | 4.389610e-50 | -8.615850e-47 |
Msa0120330 | Msa0754860 | 0.802206 | 6.262946e-49 | -8.615850e-47 |
Msa0605620 | Msa0754860 | 0.817236 | 3.660724e-52 | -8.615850e-47 |
Msa0606060 | Msa0754860 | 0.849983 | 2.278230e-60 | -8.615850e-47 |
Msa0614230 | Msa0754860 | 0.832604 | 8.595922e-56 | -8.615850e-47 |
Msa0617370 | Msa0754860 | 0.806992 | 6.282910e-50 | -8.615850e-47 |
Msa0617830 | Msa0754860 | 0.811004 | 8.694732e-51 | -8.615850e-47 |
Msa0619330 | Msa0754860 | 0.854634 | 1.079858e-61 | -8.615850e-47 |
Msa0620640 | Msa0754860 | 0.817933 | 2.550550e-52 | -8.615850e-47 |
Msa0621890 | Msa0754860 | 0.819118 | 1.373510e-52 | -8.615850e-47 |
Msa0622390 | Msa0754860 | 0.808438 | 3.097109e-50 | -8.615850e-47 |
Msa0624730 | Msa0754860 | 0.834002 | 3.854144e-56 | -8.615850e-47 |
Msa0631840 | Msa0754860 | 0.827887 | 1.220269e-54 | -8.615850e-47 |
Msa0635990 | Msa0754860 | 0.802125 | 6.508785e-49 | -8.615850e-47 |
Msa0640880 | Msa0754860 | 0.812928 | 3.312615e-51 | -8.615850e-47 |
Msa0642650 | Msa0754860 | 0.819957 | 8.837721e-53 | -8.615850e-47 |
Msa0647000 | Msa0754860 | 0.853429 | 2.403209e-61 | -8.615850e-47 |
Msa0650650 | Msa0754860 | 0.810583 | 1.072496e-50 | -8.615850e-47 |
Msa0650740 | Msa0754860 | 0.805439 | 1.333964e-49 | -8.615850e-47 |
Msa0653710 | Msa0754860 | 0.805929 | 1.052722e-49 | -8.615850e-47 |
Msa0654060 | Msa0754860 | 0.824571 | 7.508565e-54 | -8.615850e-47 |
Msa0655660 | Msa0754860 | -0.816377 | 5.706886e-52 | -8.615850e-47 |
Msa0656270 | Msa0754860 | 0.807203 | 5.670188e-50 | -8.615850e-47 |
Msa0656680 | Msa0754860 | 0.815971 | 7.031584e-52 | -8.615850e-47 |
Msa0659040 | Msa0754860 | 0.809738 | 1.631463e-50 | -8.615850e-47 |
Msa0663090 | Msa0754860 | 0.828729 | 7.644504e-55 | -8.615850e-47 |
Msa0667220 | Msa0754860 | 0.807166 | 5.770765e-50 | -8.615850e-47 |
Msa0674220 | Msa0754860 | 0.846735 | 1.802069e-59 | -8.615850e-47 |
Msa0674300 | Msa0754860 | 0.818480 | 1.918078e-52 | -8.615850e-47 |
Msa0681890 | Msa0754860 | 0.847321 | 1.244944e-59 | -8.615850e-47 |
Msa0684600 | Msa0754860 | -0.801300 | 9.610798e-49 | -8.615850e-47 |
Msa0685540 | Msa0754860 | 0.809437 | 1.893049e-50 | -8.615850e-47 |
Msa0686610 | Msa0754860 | 0.850918 | 1.244146e-60 | -8.615850e-47 |
Msa0690350 | Msa0754860 | 0.804085 | 2.558091e-49 | -8.615850e-47 |
Msa0697140 | Msa0754860 | 0.803575 | 3.265847e-49 | -8.615850e-47 |
Msa0700070 | Msa0754860 | 0.813930 | 1.994501e-51 | -8.615850e-47 |
Msa0702070 | Msa0754860 | 0.812700 | 3.714805e-51 | -8.615850e-47 |
Msa0703720 | Msa0754860 | 0.810828 | 9.492227e-51 | -8.615850e-47 |
Msa0704990 | Msa0754860 | 0.805646 | 1.207355e-49 | -8.615850e-47 |
Msa0707780 | Msa0754860 | 0.826493 | 2.632315e-54 | -8.615850e-47 |
Msa0714600 | Msa0754860 | 0.825487 | 4.563186e-54 | -8.615850e-47 |
Msa0719340 | Msa0754860 | 0.832860 | 7.427592e-56 | -8.615850e-47 |
Msa0723140 | Msa0754860 | 0.806314 | 8.734289e-50 | -8.615850e-47 |
Msa0724050 | Msa0754860 | 0.845835 | 3.169282e-59 | -8.615850e-47 |
Msa0725480 | Msa0754860 | -0.812358 | 4.413677e-51 | -8.615850e-47 |
Msa0726610 | Msa0754860 | 0.825194 | 5.353379e-54 | -8.615850e-47 |
Msa0730180 | Msa0754860 | 0.830094 | 3.563773e-55 | -8.615850e-47 |
Msa0733000 | Msa0754860 | 0.846607 | 1.953091e-59 | -8.615850e-47 |
Msa0739570 | Msa0754860 | 0.824182 | 9.269596e-54 | -8.615850e-47 |
Msa0739610 | Msa0754860 | 0.802056 | 6.724464e-49 | -8.615850e-47 |
Msa0740420 | Msa0754860 | 0.807808 | 4.217590e-50 | -8.615850e-47 |
Msa0743640 | Msa0754860 | 0.813012 | 3.174448e-51 | -8.615850e-47 |
Msa0750380 | Msa0754860 | 0.811998 | 5.289077e-51 | -8.615850e-47 |
Msa0754860 | Msa0756480 | 0.803345 | 3.644854e-49 | -8.615850e-47 |
Msa0754860 | Msa0763880 | 0.837472 | 5.095802e-57 | -8.615850e-47 |
Msa0754860 | Msa0763910 | 0.820798 | 5.669201e-53 | -8.615850e-47 |
Msa0754860 | Msa0766100 | -0.804918 | 1.715382e-49 | -8.615850e-47 |
Msa0754860 | Msa0770430 | 0.819839 | 9.408697e-53 | -8.615850e-47 |
Msa0754860 | Msa0772150 | 0.837249 | 5.811544e-57 | -8.615850e-47 |
Msa0754860 | Msa0772210 | 0.840449 | 8.637144e-58 | -8.615850e-47 |
Msa0754860 | Msa0775440 | 0.805332 | 1.404947e-49 | -8.615850e-47 |
Msa0754860 | Msa0782330 | 0.812429 | 4.258977e-51 | -8.615850e-47 |
Msa0754860 | Msa0787720 | 0.818850 | 1.580821e-52 | -8.615850e-47 |
Msa0754860 | Msa0789270 | 0.801560 | 8.501739e-49 | -8.615850e-47 |
Msa0754860 | Msa0789280 | 0.801140 | 1.036383e-48 | -8.615850e-47 |
Msa0754860 | Msa0789290 | 0.800139 | 1.658061e-48 | -8.615850e-47 |
Msa0754860 | Msa0791070 | 0.806258 | 8.975029e-50 | -8.615850e-47 |
Msa0754860 | Msa0792170 | 0.801871 | 7.337509e-49 | -8.615850e-47 |
Msa0754860 | Msa0792510 | 0.808167 | 3.537519e-50 | -8.615850e-47 |
Msa0754860 | Msa0796590 | 0.944965 | 7.366601e-104 | -8.615850e-47 |
Msa0754860 | Msa0796810 | 0.938872 | 3.274067e-99 | -8.615850e-47 |
Msa0754860 | Msa0797220 | 0.809347 | 1.979583e-50 | -8.615850e-47 |
Msa0754860 | Msa0799710 | 0.815524 | 8.844911e-52 | -8.615850e-47 |
Msa0754860 | Msa0810020 | 0.814351 | 1.610554e-51 | -8.615850e-47 |
Msa0754860 | Msa0811510 | 0.840200 | 1.003096e-57 | -8.615850e-47 |
Msa0754860 | Msa0820670 | 0.836403 | 9.550658e-57 | -8.615850e-47 |
Msa0754860 | Msa0828570 | 0.811579 | 6.524133e-51 | -8.615850e-47 |
Msa0754860 | Msa0830720 | 0.815031 | 1.138234e-51 | -8.615850e-47 |
Msa0754860 | Msa0833940 | 0.975083 | 2.631111e-139 | -8.615850e-47 |
Msa0754860 | Msa0834130 | 0.931231 | 5.122447e-94 | -8.615850e-47 |
Msa0754860 | Msa0837990 | 0.837363 | 5.433169e-57 | -8.615850e-47 |
Msa0754860 | Msa0843280 | 0.801643 | 8.174121e-49 | -8.615850e-47 |
Msa0754860 | Msa0844100 | 0.800994 | 1.109652e-48 | -8.615850e-47 |
Msa0754860 | Msa0847200 | 0.802638 | 5.100860e-49 | -8.615850e-47 |
Msa0754860 | Msa0851740 | 0.834023 | 3.808437e-56 | -8.615850e-47 |
Msa0754860 | Msa0854570 | 0.806710 | 7.205627e-50 | -8.615850e-47 |
Msa0754860 | Msa0860270 | 0.834755 | 2.494399e-56 | -8.615850e-47 |
Msa0754860 | Msa0863760 | 0.807890 | 4.051679e-50 | -8.615850e-47 |
Msa0754860 | Msa0872660 | 0.814280 | 1.669764e-51 | -8.615850e-47 |
Msa0754860 | Msa0886980 | 0.836685 | 8.094626e-57 | -8.615850e-47 |
Msa0754860 | Msa0890250 | 0.833073 | 6.574253e-56 | -8.615850e-47 |
Msa0754860 | Msa0896210 | 0.811711 | 6.108048e-51 | -8.615850e-47 |
Msa0754860 | Msa0903730 | 0.828369 | 9.339802e-55 | -8.615850e-47 |
Msa0754860 | Msa0907700 | 0.825703 | 4.056735e-54 | -8.615850e-47 |
Msa0754860 | Msa0925160 | 0.838972 | 2.092788e-57 | -8.615850e-47 |
Msa0754860 | Msa0930330 | 0.833930 | 4.019268e-56 | -8.615850e-47 |
Msa0754860 | Msa0937940 | 0.821895 | 3.165368e-53 | -8.615850e-47 |
Msa0754860 | Msa0951710 | 0.825734 | 3.987280e-54 | -8.615850e-47 |
Msa0754860 | Msa0955260 | 0.829457 | 5.092634e-55 | -8.615850e-47 |
Msa0754860 | Msa0958020 | 0.817631 | 2.983293e-52 | -8.615850e-47 |
Msa0754860 | Msa0971860 | 0.825857 | 3.729361e-54 | -8.615850e-47 |
Msa0754860 | Msa0973230 | 0.835897 | 1.284011e-56 | -8.615850e-47 |
Msa0754860 | Msa0975080 | 0.802318 | 5.938513e-49 | -8.615850e-47 |
Msa0754860 | Msa0980440 | 0.806534 | 7.851295e-50 | -8.615850e-47 |
Msa0754860 | Msa0981770 | 0.803753 | 2.998602e-49 | -8.615850e-47 |
Msa0754860 | Msa0988480 | 0.823239 | 1.541921e-53 | -8.615850e-47 |
Msa0754860 | Msa0988500 | 0.804912 | 1.720116e-49 | -8.615850e-47 |
Msa0754860 | Msa0990520 | 0.844317 | 8.148855e-59 | -8.615850e-47 |
Msa0754860 | Msa0992590 | 0.800637 | 1.312541e-48 | -8.615850e-47 |
Msa0754860 | Msa1001780 | 0.800769 | 1.233930e-48 | -8.615850e-47 |
Msa0754860 | Msa1002040 | 0.833316 | 5.720192e-56 | -8.615850e-47 |
Msa0754860 | Msa1009000 | 0.812480 | 4.149817e-51 | -8.615850e-47 |
Msa0754860 | Msa1014270 | 0.807055 | 6.092127e-50 | -8.615850e-47 |
Msa0754860 | Msa1014350 | 0.807132 | 5.867771e-50 | -8.615850e-47 |
Msa0754860 | Msa1029320 | 0.811613 | 6.414574e-51 | -8.615850e-47 |
Msa0754860 | Msa1032350 | 0.804869 | 1.756185e-49 | -8.615850e-47 |
Msa0754860 | Msa1037060 | -0.808254 | 3.389907e-50 | -8.615850e-47 |
Msa0754860 | Msa1038320 | 0.869892 | 2.202274e-66 | -8.615850e-47 |
Msa0754860 | Msa1043870 | 0.808560 | 2.916147e-50 | -8.615850e-47 |
Msa0754860 | Msa1044040 | 0.835873 | 1.301910e-56 | -8.615850e-47 |
Msa0754860 | Msa1044340 | 0.821754 | 3.412455e-53 | -8.615850e-47 |
Msa0754860 | Msa1055260 | 0.801173 | 1.020092e-48 | -8.615850e-47 |
Msa0754860 | Msa1055280 | 0.813128 | 2.993455e-51 | -8.615850e-47 |
Msa0754860 | Msa1064210 | 0.810327 | 1.217976e-50 | -8.615850e-47 |
Msa0754860 | Msa1072350 | 0.824168 | 9.341155e-54 | -8.615850e-47 |
Msa0754860 | Msa1089530 | 0.827264 | 1.721838e-54 | -8.615850e-47 |
Msa0754860 | Msa1098560 | 0.810490 | 1.123014e-50 | -8.615850e-47 |
Msa0754860 | Msa1106560 | 0.812946 | 3.281314e-51 | -8.615850e-47 |
Msa0754860 | Msa1112610 | 0.806120 | 9.598988e-50 | -8.615850e-47 |
Msa0754860 | Msa1115580 | 0.801311 | 9.558937e-49 | -8.615850e-47 |
Msa0754860 | Msa1118140 | 0.837472 | 5.095548e-57 | -8.615850e-47 |
Msa0754860 | Msa1122510 | 0.825987 | 3.473917e-54 | -8.615850e-47 |
Msa0754860 | Msa1125780 | 0.806381 | 8.458464e-50 | -8.615850e-47 |
Msa0754860 | Msa1125950 | 0.811581 | 6.517967e-51 | -8.615850e-47 |
Msa0754860 | Msa1129560 | 0.809546 | 1.793381e-50 | -8.615850e-47 |
Msa0754860 | Msa1133660 | 0.819849 | 9.357001e-53 | -8.615850e-47 |
Msa0754860 | Msa1140010 | 0.812959 | 3.260423e-51 | -8.615850e-47 |
Msa0754860 | Msa1149760 | 0.810870 | 9.297958e-51 | -8.615850e-47 |
Msa0754860 | Msa1157160 | 0.825466 | 4.616623e-54 | -8.615850e-47 |
Msa0754860 | Msa1159360 | 0.824724 | 6.911125e-54 | -8.615850e-47 |
Msa0754860 | Msa1161160 | 0.801027 | 1.092538e-48 | -8.615850e-47 |
Msa0754860 | Msa1164800 | -0.813175 | 2.924106e-51 | -8.615850e-47 |
Msa0754860 | Msa1166180 | 0.822963 | 1.787737e-53 | -8.615850e-47 |
Msa0754860 | Msa1166280 | 0.817352 | 3.448441e-52 | -8.615850e-47 |
Msa0754860 | Msa1171340 | 0.813608 | 2.348481e-51 | -8.615850e-47 |
Msa0754860 | Msa1172590 | 0.819379 | 1.198113e-52 | -8.615850e-47 |
Msa0754860 | Msa1204120 | 0.821672 | 3.564633e-53 | -8.615850e-47 |
Msa0754860 | Msa1210770 | 0.826119 | 3.230285e-54 | -8.615850e-47 |
Msa0754860 | Msa1214900 | 0.811394 | 7.155636e-51 | -8.615850e-47 |
Msa0754860 | Msa1220230 | 0.805297 | 1.429186e-49 | -8.615850e-47 |
Msa0754860 | Msa1220450 | -0.809445 | 1.885796e-50 | -8.615850e-47 |
Msa0754860 | Msa1220460 | -0.814022 | 1.903875e-51 | -8.615850e-47 |
Msa0754860 | Msa1220480 | -0.813350 | 2.676413e-51 | -8.615850e-47 |
Msa0754860 | Msa1220740 | 0.805814 | 1.112832e-49 | -8.615850e-47 |
Msa0754860 | Msa1221570 | -0.801978 | 6.976001e-49 | -8.615850e-47 |
Msa0754860 | Msa1222030 | -0.813369 | 2.650956e-51 | -8.615850e-47 |
Msa0754860 | Msa1226600 | 0.843221 | 1.601061e-58 | -8.615850e-47 |
Msa0754860 | Msa1237030 | 0.807103 | 5.951845e-50 | -8.615850e-47 |
Msa0754860 | Msa1254770 | 0.800867 | 1.178376e-48 | -8.615850e-47 |
Msa0754860 | Msa1262310 | 0.831737 | 1.408586e-55 | -8.615850e-47 |
Msa0754860 | Msa1263030 | 0.808098 | 3.659193e-50 | -8.615850e-47 |
Msa0754860 | Msa1264560 | 0.803517 | 3.356711e-49 | -8.615850e-47 |
Msa0754860 | Msa1265960 | 0.831821 | 1.343302e-55 | -8.615850e-47 |
Msa0754860 | Msa1280120 | 0.800421 | 1.452888e-48 | -8.615850e-47 |
Msa0754860 | Msa1280130 | 0.809448 | 1.882867e-50 | -8.615850e-47 |
Msa0754860 | Msa1284030 | 0.800234 | 1.586114e-48 | -8.615850e-47 |
Msa0754860 | Msa1302150 | 0.801698 | 7.964502e-49 | -8.615850e-47 |
Msa0754860 | Msa1303720 | 0.805308 | 1.421217e-49 | -8.615850e-47 |
Msa0754860 | Msa1303780 | 0.822015 | 2.969185e-53 | -8.615850e-47 |
Msa0754860 | Msa1323060 | 0.822612 | 2.157872e-53 | -8.615850e-47 |
Msa0754860 | Msa1325980 | 0.817012 | 4.112078e-52 | -8.615850e-47 |
Msa0754860 | Msa1326000 | 0.826106 | 3.253900e-54 | -8.615850e-47 |
Msa0754860 | Msa1327820 | 0.805323 | 1.410997e-49 | -8.615850e-47 |
Msa0754860 | Msa1335970 | -0.803011 | 4.271741e-49 | -8.615850e-47 |
Msa0754860 | Msa1337190 | 0.800421 | 1.452933e-48 | -8.615850e-47 |
Msa0754860 | Msa1341930 | 0.816320 | 5.876025e-52 | -8.615850e-47 |
Msa0754860 | Msa1343820 | 0.801885 | 7.288561e-49 | -8.615850e-47 |
Msa0754860 | Msa1347620 | 0.800506 | 1.395920e-48 | -8.615850e-47 |
Msa0754860 | Msa1349360 | 0.804002 | 2.661682e-49 | -8.615850e-47 |
Msa0754860 | Msa1352290 | 0.830434 | 2.942568e-55 | -8.615850e-47 |
Msa0754860 | Msa1354040 | 0.831051 | 2.078193e-55 | -8.615850e-47 |
Msa0754860 | Msa1355260 | 0.839038 | 2.012250e-57 | -8.615850e-47 |
Msa0754860 | Msa1357170 | 0.805332 | 1.404645e-49 | -8.615850e-47 |
Msa0754860 | Msa1367940 | 0.819529 | 1.107244e-52 | -8.615850e-47 |
Msa0754860 | Msa1373910 | 0.806240 | 9.055881e-50 | -8.615850e-47 |
Msa0754860 | Msa1373950 | 0.800804 | 1.213397e-48 | -8.615850e-47 |
Msa0754860 | Msa1374440 | 0.801542 | 8.573875e-49 | -8.615850e-47 |
Msa0754860 | Msa1379990 | 0.808484 | 3.027388e-50 | -8.615850e-47 |
Msa0754860 | Msa1381130 | 0.832305 | 1.019789e-55 | -8.615850e-47 |
Msa0754860 | Msa1382720 | 0.805078 | 1.587745e-49 | -8.615850e-47 |
Msa0754860 | Msa1387090 | 0.809003 | 2.345765e-50 | -8.615850e-47 |
Msa0754860 | Msa1388040 | 0.940218 | 3.396284e-100 | -8.615850e-47 |
Msa0754860 | Msa1395570 | 0.819238 | 1.289646e-52 | -8.615850e-47 |
Msa0754860 | Msa1397540 | 0.812583 | 3.940602e-51 | -8.615850e-47 |
Msa0754860 | Msa1405180 | 0.818659 | 1.746908e-52 | -8.615850e-47 |
Msa0754860 | Msa1405770 | 0.821363 | 4.202349e-53 | -8.615850e-47 |
Msa0754860 | Msa1406230 | 0.808296 | 3.320770e-50 | -8.615850e-47 |
Msa0754860 | Msa1412080 | 0.803174 | 3.953459e-49 | -8.615850e-47 |
Msa0754860 | Msa1418200 | 0.856057 | 4.159337e-62 | -8.615850e-47 |
Msa0754860 | Msa1428420 | 0.844981 | 5.398826e-59 | -8.615850e-47 |
Msa0754860 | Msa1431000 | 0.833216 | 6.057626e-56 | -8.615850e-47 |
Msa0754860 | Msa1435470 | 0.822563 | 2.215094e-53 | -8.615850e-47 |
Msa0754860 | Msa1447560 | 0.856038 | 4.214425e-62 | -8.615850e-47 |
Msa0754860 | Msa1449880 | 0.801772 | 7.691813e-49 | -8.615850e-47 |
Msa0754860 | Msa1450020 | 0.809870 | 1.527743e-50 | -8.615850e-47 |
Msa0754860 | Msa1455620 | 0.813106 | 3.027745e-51 | -8.615850e-47 |
Msa0754860 | Msa1456810 | 0.854945 | 8.774256e-62 | -8.615850e-47 |
Msa0754860 | Msa1458920 | 0.840775 | 7.095766e-58 | -8.615850e-47 |
Msa0754860 | Msa1464560 | 0.867275 | 1.542754e-65 | -8.615850e-47 |
Msa0125230 | Msa0754860 | 0.841862 | 3.672968e-58 | -8.615850e-47 |
Msa0126900 | Msa0754860 | 0.813300 | 2.743982e-51 | -8.615850e-47 |
Msa0133440 | Msa0754860 | 0.801318 | 9.526530e-49 | -8.615850e-47 |
Msa0135980 | Msa0754860 | 0.817618 | 3.003880e-52 | -8.615850e-47 |
Msa0141550 | Msa0754860 | 0.810481 | 1.128193e-50 | -8.615850e-47 |
Msa0141670 | Msa0754860 | 0.835582 | 1.543428e-56 | -8.615850e-47 |
Msa0143970 | Msa0754860 | 0.812274 | 4.603485e-51 | -8.615850e-47 |
Msa0145950 | Msa0754860 | 0.808010 | 3.820250e-50 | -8.615850e-47 |
Msa0146020 | Msa0754860 | 0.816159 | 6.383689e-52 | -8.615850e-47 |
Msa0146470 | Msa0754860 | 0.810035 | 1.407890e-50 | -8.615850e-47 |
Msa0149500 | Msa0754860 | 0.836685 | 8.094798e-57 | -8.615850e-47 |
Msa0151690 | Msa0754860 | 0.807133 | 5.865367e-50 | -8.615850e-47 |
Msa0157020 | Msa0754860 | 0.807760 | 4.319118e-50 | -8.615850e-47 |
Msa0159750 | Msa0754860 | 0.825925 | 3.592742e-54 | -8.615850e-47 |
Msa0163550 | Msa0754860 | 0.814929 | 1.199321e-51 | -8.615850e-47 |
Msa0164360 | Msa0754860 | 0.854590 | 1.112645e-61 | -8.615850e-47 |
Msa0168100 | Msa0754860 | 0.826129 | 3.213620e-54 | -8.615850e-47 |
Msa0175530 | Msa0754860 | 0.819669 | 1.028593e-52 | -8.615850e-47 |
Msa0182930 | Msa0754860 | 0.815340 | 9.719544e-52 | -8.615850e-47 |
Msa0183610 | Msa0754860 | 0.815541 | 8.768160e-52 | -8.615850e-47 |
Msa0183620 | Msa0754860 | 0.821362 | 4.204314e-53 | -8.615850e-47 |
Msa0185390 | Msa0754860 | 0.833087 | 6.524152e-56 | -8.615850e-47 |
Msa0194570 | Msa0754860 | 0.823228 | 1.550974e-53 | -8.615850e-47 |
Msa0203640 | Msa0754860 | 0.813764 | 2.169458e-51 | -8.615850e-47 |
Msa0207000 | Msa0754860 | 0.852246 | 5.234354e-61 | -8.615850e-47 |
Msa0208520 | Msa0754860 | 0.824190 | 9.232006e-54 | -8.615850e-47 |
Msa0213080 | Msa0754860 | 0.816871 | 4.423430e-52 | -8.615850e-47 |
Msa0217470 | Msa0754860 | 0.820749 | 5.818592e-53 | -8.615850e-47 |
Msa0222070 | Msa0754860 | 0.836958 | 6.898126e-57 | -8.615850e-47 |
Msa0222120 | Msa0754860 | 0.837356 | 5.456427e-57 | -8.615850e-47 |
Msa0227290 | Msa0754860 | 0.813170 | 2.930412e-51 | -8.615850e-47 |
Msa0227490 | Msa0754860 | 0.823030 | 1.725094e-53 | -8.615850e-47 |
Msa0227500 | Msa0754860 | 0.841995 | 3.387978e-58 | -8.615850e-47 |
Msa0371070 | Msa0754860 | 0.802460 | 5.552881e-49 | -8.615850e-47 |
Msa0371610 | Msa0754860 | 0.836441 | 9.339161e-57 | -8.615850e-47 |
Msa0378340 | Msa0754860 | 0.813905 | 2.020534e-51 | -8.615850e-47 |
Msa0413740 | Msa0754860 | 0.849878 | 2.436294e-60 | -8.615850e-47 |
Msa0414070 | Msa0754860 | 0.802192 | 6.303560e-49 | -8.615850e-47 |
Msa0417630 | Msa0754860 | 0.808004 | 3.832723e-50 | -8.615850e-47 |
Msa0418000 | Msa0754860 | 0.823792 | 1.144319e-53 | -8.615850e-47 |
Msa0420070 | Msa0754860 | 0.812187 | 4.809348e-51 | -8.615850e-47 |
Msa0421800 | Msa0754860 | 0.825014 | 5.903752e-54 | -8.615850e-47 |
Msa0423110 | Msa0754860 | 0.802117 | 6.533167e-49 | -8.615850e-47 |
Msa0423360 | Msa0754860 | -0.820434 | 6.872632e-53 | -8.615850e-47 |
Msa0423600 | Msa0754860 | 0.805973 | 1.030513e-49 | -8.615850e-47 |
Msa0427050 | Msa0754860 | 0.823500 | 1.339785e-53 | -8.615850e-47 |
Msa0427690 | Msa0754860 | 0.811792 | 5.864433e-51 | -8.615850e-47 |
Msa0431430 | Msa0754860 | 0.805423 | 1.344752e-49 | -8.615850e-47 |
Msa0432680 | Msa0754860 | 0.801331 | 9.468280e-49 | -8.615850e-47 |
Msa0436460 | Msa0754860 | 0.807969 | 3.899017e-50 | -8.615850e-47 |
Msa0448080 | Msa0754860 | 0.818156 | 2.269995e-52 | -8.615850e-47 |
Msa0450460 | Msa0754860 | 0.806999 | 6.262814e-50 | -8.615850e-47 |
Msa0458790 | Msa0754860 | 0.831831 | 1.335210e-55 | -8.615850e-47 |
Msa0459120 | Msa0754860 | 0.803201 | 3.903694e-49 | -8.615850e-47 |
Msa0462590 | Msa0754860 | 0.809609 | 1.739145e-50 | -8.615850e-47 |
Msa0463020 | Msa0754860 | 0.816700 | 4.830860e-52 | -8.615850e-47 |
Msa0467800 | Msa0754860 | 0.804623 | 1.976615e-49 | -8.615850e-47 |
Msa0467880 | Msa0754860 | 0.802599 | 5.197424e-49 | -8.615850e-47 |
Msa0469970 | Msa0754860 | 0.817858 | 2.651418e-52 | -8.615850e-47 |
Msa0480320 | Msa0754860 | 0.811640 | 6.327418e-51 | -8.615850e-47 |
Msa0482680 | Msa0754860 | 0.801767 | 7.710099e-49 | -8.615850e-47 |
Msa0252180 | Msa0754860 | 0.844629 | 6.716606e-59 | -8.615850e-47 |
Msa0253980 | Msa0754860 | 0.800955 | 1.130425e-48 | -8.615850e-47 |
Msa0257130 | Msa0754860 | 0.818994 | 1.466076e-52 | -8.615850e-47 |
Msa0263620 | Msa0754860 | 0.834623 | 2.693007e-56 | -8.615850e-47 |
Msa0265820 | Msa0754860 | 0.806498 | 7.990845e-50 | -8.615850e-47 |
Msa0267760 | Msa0754860 | 0.802343 | 5.869437e-49 | -8.615850e-47 |
Msa0269360 | Msa0754860 | 0.834737 | 2.521051e-56 | -8.615850e-47 |
Msa0278620 | Msa0754860 | 0.828761 | 7.511007e-55 | -8.615850e-47 |
Msa0281570 | Msa0754860 | 0.831082 | 2.042514e-55 | -8.615850e-47 |
Msa0282170 | Msa0754860 | 0.813876 | 2.050567e-51 | -8.615850e-47 |
Msa0284780 | Msa0754860 | 0.807422 | 5.093197e-50 | -8.615850e-47 |
Msa0284870 | Msa0754860 | 0.810476 | 1.131059e-50 | -8.615850e-47 |
Msa0288240 | Msa0754860 | 0.834257 | 3.326765e-56 | -8.615850e-47 |
Msa0288330 | Msa0754860 | 0.827631 | 1.405854e-54 | -8.615850e-47 |
Msa0291040 | Msa0754860 | 0.800184 | 1.623504e-48 | -8.615850e-47 |
Msa0292070 | Msa0754860 | 0.803668 | 3.123619e-49 | -8.615850e-47 |
Msa0295240 | Msa0754860 | 0.800082 | 1.702548e-48 | -8.615850e-47 |
Msa0296610 | Msa0754860 | 0.810725 | 9.990654e-51 | -8.615850e-47 |
Msa0296760 | Msa0754860 | 0.827714 | 1.342805e-54 | -8.615850e-47 |
Msa0298940 | Msa0754860 | 0.821958 | 3.060319e-53 | -8.615850e-47 |
Msa0298970 | Msa0754860 | 0.830198 | 3.360866e-55 | -8.615850e-47 |
Msa0301180 | Msa0754860 | 0.850400 | 1.740577e-60 | -8.615850e-47 |
Msa0306130 | Msa0754860 | 0.835774 | 1.379778e-56 | -8.615850e-47 |
Msa0318000 | Msa0754860 | 0.836758 | 7.758299e-57 | -8.615850e-47 |
Msa0318270 | Msa0754860 | 0.817939 | 2.541738e-52 | -8.615850e-47 |
Msa0318310 | Msa0754860 | 0.816171 | 6.345226e-52 | -8.615850e-47 |
Msa0320540 | Msa0754860 | 0.848967 | 4.372840e-60 | -8.615850e-47 |
Msa0321800 | Msa0754860 | 0.800507 | 1.395378e-48 | -8.615850e-47 |
Msa0323630 | Msa0754860 | 0.811995 | 5.297029e-51 | -8.615850e-47 |
Msa0325470 | Msa0754860 | 0.804110 | 2.528371e-49 | -8.615850e-47 |
Msa0326670 | Msa0754860 | 0.811759 | 5.961458e-51 | -8.615850e-47 |
Msa0330270 | Msa0754860 | 0.823301 | 1.491049e-53 | -8.615850e-47 |
Msa0331780 | Msa0754860 | 0.817494 | 3.203200e-52 | -8.615850e-47 |
Msa0336270 | Msa0754860 | 0.840610 | 7.841303e-58 | -8.615850e-47 |
Msa0342200 | Msa0754860 | 0.832506 | 9.092169e-56 | -8.615850e-47 |
Msa0344070 | Msa0754860 | 0.832121 | 1.132528e-55 | -8.615850e-47 |
Msa0344640 | Msa0754860 | 0.803889 | 2.810594e-49 | -8.615850e-47 |
Msa0357380 | Msa0754860 | 0.839596 | 1.441650e-57 | -8.615850e-47 |
Msa0357390 | Msa0754860 | 0.831993 | 1.218070e-55 | -8.615850e-47 |
Msa0484690 | Msa0754860 | 0.802501 | 5.444565e-49 | -8.615850e-47 |
Msa0485280 | Msa0754860 | 0.802677 | 5.008030e-49 | -8.615850e-47 |
Msa0490350 | Msa0754860 | 0.802304 | 5.977279e-49 | -8.615850e-47 |
Msa0505390 | Msa0754860 | 0.848111 | 7.544685e-60 | -8.615850e-47 |
Msa0505660 | Msa0754860 | 0.828669 | 7.905747e-55 | -8.615850e-47 |
Msa0508610 | Msa0754860 | 0.814228 | 1.714463e-51 | -8.615850e-47 |
Msa0508650 | Msa0754860 | 0.811944 | 5.433506e-51 | -8.615850e-47 |
Msa0510450 | Msa0754860 | 0.826667 | 2.391875e-54 | -8.615850e-47 |
Msa0514260 | Msa0754860 | 0.826618 | 2.457246e-54 | -8.615850e-47 |
Msa0518520 | Msa0754860 | 0.809744 | 1.626434e-50 | -8.615850e-47 |
Msa0524050 | Msa0754860 | 0.847029 | 1.497273e-59 | -8.615850e-47 |
Msa0524090 | Msa0754860 | 0.848786 | 4.908952e-60 | -8.615850e-47 |
Msa0524120 | Msa0754860 | 0.870260 | 1.669356e-66 | -8.615850e-47 |
Msa0535450 | Msa0754860 | 0.840664 | 7.589369e-58 | -8.615850e-47 |
Msa0540320 | Msa0754860 | 0.837434 | 5.210675e-57 | -8.615850e-47 |
Msa0542010 | Msa0754860 | 0.803680 | 3.105047e-49 | -8.615850e-47 |
Msa0542040 | Msa0754860 | 0.803480 | 3.416775e-49 | -8.615850e-47 |
Msa0546380 | Msa0754860 | 0.823534 | 1.315168e-53 | -8.615850e-47 |
Msa0546740 | Msa0754860 | 0.831294 | 1.811087e-55 | -8.615850e-47 |
Msa0574170 | Msa0754860 | 0.803323 | 3.681948e-49 | -8.615850e-47 |
Msa0576420 | Msa0754860 | 0.830466 | 2.890699e-55 | -8.615850e-47 |
Msa0577230 | Msa0754860 | 0.809166 | 2.164321e-50 | -8.615850e-47 |
Msa0579340 | Msa0754860 | 0.810164 | 1.320443e-50 | -8.615850e-47 |
Msa0582110 | Msa0754860 | 0.839001 | 2.057496e-57 | -8.615850e-47 |
Msa0596100 | Msa0754860 | 0.832414 | 9.585333e-56 | -8.615850e-47 |
Msa0598250 | Msa0754860 | 0.838420 | 2.905902e-57 | -8.615850e-47 |
Msa0600390 | Msa0754860 | 0.808572 | 2.900295e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0754860 | MtrunA17_Chr5g0399691 | 93.040 | 273 | 16 | 1 | 1 | 270 | 1 | 273 | 2.82e-157 | 440 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0754860 | AT4G17540.1 | 45.714 | 280 | 123 | 5 | 10 | 285 | 28 | 282 | 3.96e-65 | 206 |
Find 101 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATCCATTTACTTTGAAATT+TGG | 0.141463 | 5_2:+8554518 | Msa0754860:CDS |
TGTCCAAATTTCAAAGTAAA+TGG | 0.158302 | 5_2:-8554521 | None:intergenic |
GCATTAGATGACAGGTATTT+AGG | 0.201098 | 5_2:+8558208 | Msa0754860:three_prime_UTR |
GTTGGAAGCCCTTTAAATTT+AGG | 0.210875 | 5_2:+8554587 | Msa0754860:CDS |
GGACAAGTATTTACTGGTTT+TGG | 0.211578 | 5_2:+8554539 | Msa0754860:CDS |
TAAGGGAGATCTCACGGTTT+AGG | 0.233689 | 5_2:-8558068 | None:intergenic |
GCTTGCACGTTATCGCTTAA+AGG | 0.246676 | 5_2:+8558039 | Msa0754860:three_prime_UTR |
AGAGTAGTACCTAAATTTAA+AGG | 0.274370 | 5_2:-8554596 | None:intergenic |
CCTATACTATATCCTGTAAT+TGG | 0.287565 | 5_2:-8558141 | None:intergenic |
AAGGGAGATCTCACGGTTTA+GGG | 0.290126 | 5_2:-8558067 | None:intergenic |
ATGGGTTACTTACCAATTAC+AGG | 0.311687 | 5_2:+8558129 | Msa0754860:three_prime_UTR |
CAGTCTGAGAAATTTGATTC+TGG | 0.317467 | 5_2:+8554318 | None:intergenic |
GCCACAGGTGCAGTCAGTTC+TGG | 0.319464 | 5_2:+8556082 | Msa0754860:CDS |
TTCATATAGTTGAGGAAGAT+TGG | 0.320215 | 5_2:+8554993 | Msa0754860:intron |
AAATTTGGACAAGTATTTAC+TGG | 0.322518 | 5_2:+8554533 | Msa0754860:CDS |
CAAGTTCTTCAATCATTTGC+TGG | 0.323313 | 5_2:-8557832 | None:intergenic |
CTACAAGTTGCCCCTGCTAA+TGG | 0.340138 | 5_2:+8558110 | Msa0754860:three_prime_UTR |
GTTGGATGTGGAGTTGGTTT+CGG | 0.345001 | 5_2:+8555038 | Msa0754860:CDS |
CTTGCACGTTATCGCTTAAA+GGG | 0.350496 | 5_2:+8558040 | Msa0754860:three_prime_UTR |
ACAAAGATGATGATGAAGTT+TGG | 0.354809 | 5_2:+8556004 | Msa0754860:CDS |
ACCCGGATTAAACGGTAAAC+TGG | 0.357165 | 5_2:-8556035 | None:intergenic |
AGAACTAGCTTCAAGTTTGC+TGG | 0.358017 | 5_2:-8557909 | None:intergenic |
TCCCAGTTTACCGTTTAATC+CGG | 0.367717 | 5_2:+8556033 | Msa0754860:CDS |
TACAAGTTGCCCCTGCTAAT+GGG | 0.377837 | 5_2:+8558111 | Msa0754860:three_prime_UTR |
TTGGTTGGAGAGGAGTAAAA+TGG | 0.387600 | 5_2:+8558314 | Msa0754860:three_prime_UTR |
AAACTTGAAGCTAGTTCTTC+AGG | 0.400339 | 5_2:+8557914 | Msa0754860:CDS |
TCAACCAATGAACATTGGTT+TGG | 0.414979 | 5_2:+8556165 | Msa0754860:CDS |
TACATGGGCAAGGGTCTGTT+TGG | 0.419304 | 5_2:+8558295 | Msa0754860:three_prime_UTR |
TCTGCAAAATCCACTGTTGA+AGG | 0.419732 | 5_2:+8556267 | Msa0754860:CDS |
AAAGCCAAACCAATGTTCAT+TGG | 0.422194 | 5_2:-8556169 | None:intergenic |
TGCACCTGTGGCACTTTGTA+AGG | 0.422373 | 5_2:-8556071 | None:intergenic |
AGTCAAGCTGCTTGAATCAA+TGG | 0.423047 | 5_2:-8554360 | None:intergenic |
GAGTAGTACCTAAATTTAAA+GGG | 0.424503 | 5_2:-8554595 | None:intergenic |
GTGGGTGTTGGATGTGGAGT+TGG | 0.433318 | 5_2:+8555032 | Msa0754860:CDS |
GGCAATGCACCCGGATTAAA+CGG | 0.440473 | 5_2:-8556043 | None:intergenic |
CATTAGCAGGGGCAACTTGT+AGG | 0.443920 | 5_2:-8558109 | None:intergenic |
ATCAAGTTATGAGTGCTACT+AGG | 0.451482 | 5_2:+8554849 | Msa0754860:CDS |
TTTGGAATCGGTTGTGGAGT+TGG | 0.458433 | 5_2:+8554557 | Msa0754860:CDS |
ATGAGAGCTTACTGATTCGC+TGG | 0.460415 | 5_2:-8556305 | None:intergenic |
TCAAGTTATGAGTGCTACTA+GGG | 0.471040 | 5_2:+8554850 | Msa0754860:CDS |
TTGGTAAGTAACCCATTAGC+AGG | 0.472572 | 5_2:-8558122 | None:intergenic |
TGTGGAGTTGGTTTCGGTCA+TGG | 0.472934 | 5_2:+8555044 | Msa0754860:CDS |
ACAGGACTTGCTGTGAAACC+TGG | 0.477065 | 5_2:+8555855 | Msa0754860:intron |
CCAATTACAGGATATAGTAT+AGG | 0.478483 | 5_2:+8558141 | Msa0754860:three_prime_UTR |
GAATCAATGGAAGCAATTGT+TGG | 0.479648 | 5_2:-8554347 | None:intergenic |
GTTGGTTTCGGTCATGGTGT+TGG | 0.481887 | 5_2:+8555050 | Msa0754860:CDS |
ATTGAAGTGGGTGTTGGATG+TGG | 0.485704 | 5_2:+8555026 | Msa0754860:CDS |
TGGAGGAAAATGAGAAGCTT+CGG | 0.486885 | 5_2:+8557855 | Msa0754860:CDS |
CCTCCTTCTCCCTTCAACAG+TGG | 0.488432 | 5_2:-8556277 | None:intergenic |
TGGGCAAGGGTCTGTTTGGT+TGG | 0.489899 | 5_2:+8558299 | Msa0754860:three_prime_UTR |
AAAAGATAAGAGTAGTATTG+AGG | 0.494638 | 5_2:+8554455 | Msa0754860:five_prime_UTR |
AAGGGTCTGTTTGGTTGGAG+AGG | 0.496557 | 5_2:+8558304 | Msa0754860:three_prime_UTR |
ACTTCAGCCGACTCTACATA+TGG | 0.500649 | 5_2:+8556214 | Msa0754860:CDS |
TGTGGAGTTGGTATCGGTGT+TGG | 0.502325 | 5_2:+8554569 | Msa0754860:CDS |
TTCGGTCATGGTGTTGGAGT+TGG | 0.502955 | 5_2:+8555056 | Msa0754860:CDS |
CCCAGTTTACCGTTTAATCC+GGG | 0.504429 | 5_2:+8556034 | Msa0754860:CDS |
TGAATTTGATTCAACACCCC+AGG | 0.508485 | 5_2:-8555873 | None:intergenic |
ACTAATTAGCATTAGATGAC+AGG | 0.510013 | 5_2:+8558200 | Msa0754860:three_prime_UTR |
AAGAAAACAAAGAAGAAAGT+AGG | 0.525920 | 5_2:+8557982 | Msa0754860:CDS |
CACTCAAAACAATCAGTACA+TGG | 0.527145 | 5_2:-8557956 | None:intergenic |
CTGCAAAATCCACTGTTGAA+GGG | 0.528070 | 5_2:+8556268 | Msa0754860:CDS |
AAGAATATTGAAGTGGGTGT+TGG | 0.528611 | 5_2:+8555020 | Msa0754860:CDS |
ATCGGTTGTGGAGTTGGTAT+CGG | 0.538819 | 5_2:+8554563 | Msa0754860:CDS |
ATAAGAGTAGTATTGAGGAA+TGG | 0.547460 | 5_2:+8554460 | Msa0754860:exon |
AGATGACAGGTATTTAGGAA+TGG | 0.555064 | 5_2:+8558213 | Msa0754860:three_prime_UTR |
CCCGGATTAAACGGTAAACT+GGG | 0.556288 | 5_2:-8556034 | None:intergenic |
GCAAATGATTGAAGAACTTG+TGG | 0.559081 | 5_2:+8557835 | Msa0754860:CDS |
AAGGATGCTGGCAATGCACC+CGG | 0.560291 | 5_2:-8556052 | None:intergenic |
CAGGACTTGCTGTGAAACCT+GGG | 0.561209 | 5_2:+8555856 | Msa0754860:intron |
AGAGAACAAAATACTTCAGA+TGG | 0.561726 | 5_2:+8557661 | Msa0754860:CDS |
ATAATATAGTAAAAGATACA+TGG | 0.562231 | 5_2:+8558279 | Msa0754860:three_prime_UTR |
TAGTAAAAGATACATGGGCA+AGG | 0.571477 | 5_2:+8558285 | Msa0754860:three_prime_UTR |
TCCAGAACTGACTGCACCTG+TGG | 0.578803 | 5_2:-8556083 | None:intergenic |
TGGTAAGTAACCCATTAGCA+GGG | 0.583261 | 5_2:-8558121 | None:intergenic |
CTAGCTTCAAGTTTGCTGGA+TGG | 0.583563 | 5_2:-8557905 | None:intergenic |
TGAGAGCTTACTGATTCGCT+GGG | 0.586043 | 5_2:-8556304 | None:intergenic |
GTGGCACTTTGTAAGGATGC+TGG | 0.588800 | 5_2:-8556064 | None:intergenic |
AATCCACTGTTGAAGGGAGA+AGG | 0.589188 | 5_2:+8556274 | Msa0754860:CDS |
GCATCCTTACAAAGTGCCAC+AGG | 0.589278 | 5_2:+8556067 | Msa0754860:CDS |
TCAGCTGATCAGTTATCTCA+AGG | 0.590242 | 5_2:+8556130 | Msa0754860:CDS |
GTTGGAGAGGAGTAAAATGG+AGG | 0.596132 | 5_2:+8558317 | Msa0754860:three_prime_UTR |
ATATGGCAGTCGAACTGAGA+AGG | 0.597072 | 5_2:+8556231 | Msa0754860:CDS |
TGGAGCTAAGAATATTGAAG+TGG | 0.597204 | 5_2:+8555013 | Msa0754860:CDS |
CCACTGTTGAAGGGAGAAGG+AGG | 0.603974 | 5_2:+8556277 | Msa0754860:CDS |
GGAGCTAAGAATATTGAAGT+GGG | 0.605534 | 5_2:+8555014 | Msa0754860:CDS |
AGTAAAAGATACATGGGCAA+GGG | 0.606431 | 5_2:+8558286 | Msa0754860:three_prime_UTR |
AATGATTGAAGAACTTGTGG+AGG | 0.616671 | 5_2:+8557838 | Msa0754860:CDS |
TAATATAGTAAAAGATACAT+GGG | 0.620520 | 5_2:+8558280 | Msa0754860:three_prime_UTR |
CTGTTGAAGGGAGAAGGAGG+AGG | 0.623525 | 5_2:+8556280 | Msa0754860:CDS |
TCGACTGCCATATGTAGAGT+CGG | 0.624499 | 5_2:-8556221 | None:intergenic |
GGGTCTCAACCAATGAACAT+TGG | 0.632984 | 5_2:+8556160 | Msa0754860:intron |
GCTTCGGCAGATACTAGTGA+AGG | 0.640377 | 5_2:+8557871 | Msa0754860:CDS |
TGTTGCAGTGAGTTGAGTTG+AGG | 0.643118 | 5_2:-8554413 | None:intergenic |
CTCATAACTTGATTCAACAT+CGG | 0.655826 | 5_2:-8554839 | None:intergenic |
TTGCACGTTATCGCTTAAAG+GGG | 0.660290 | 5_2:+8558041 | Msa0754860:three_prime_UTR |
AGGGAGATCTCACGGTTTAG+GGG | 0.678296 | 5_2:-8558066 | None:intergenic |
GGTAAGTAACCCATTAGCAG+GGG | 0.690059 | 5_2:-8558120 | None:intergenic |
AGGACTTGCTGTGAAACCTG+GGG | 0.707838 | 5_2:+8555857 | Msa0754860:intron |
CAAGTTATGAGTGCTACTAG+GGG | 0.719794 | 5_2:+8554851 | Msa0754860:CDS |
ATCGTATTCGTAGAACGTGG+CGG | 0.735634 | 5_2:-8554387 | None:intergenic |
AGCATCGTATTCGTAGAACG+TGG | 0.739027 | 5_2:-8554390 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATATATATATATATATAT+TGG | - | chr5_2:8557499-8557518 | None:intergenic | 0.0% |
!! | AAAAAAAAAAAAAGTGAAAA+AGG | - | chr5_2:8554737-8554756 | None:intergenic | 10.0% |
!!! | AATTTTACAAAATACTATTT+TGG | - | chr5_2:8556730-8556749 | None:intergenic | 10.0% |
!!! | TATTGTTATTTTTTTCAAAA+CGG | + | chr5_2:8556899-8556918 | Msa0754860:intron | 10.0% |
!!! | ATTATTTCTTAATTTTTCTT+GGG | - | chr5_2:8558264-8558283 | None:intergenic | 10.0% |
!!! | TATTATTTCTTAATTTTTCT+TGG | - | chr5_2:8558265-8558284 | None:intergenic | 10.0% |
!!! | TTTTGAATTATTGATCATTT+AGG | + | chr5_2:8555177-8555196 | Msa0754860:intron | 15.0% |
!!! | TTTTCTTTTATTATTATGAC+AGG | + | chr5_2:8555837-8555856 | Msa0754860:intron | 15.0% |
!!! | TTGTTTCTTTATATACTTTT+TGG | + | chr5_2:8557344-8557363 | Msa0754860:intron | 15.0% |
!!! | TGTTTATTTATTTTTTCCTA+TGG | + | chr5_2:8557792-8557811 | Msa0754860:intron | 15.0% |
!! | ATAATATAGTAAAAGATACA+TGG | + | chr5_2:8558279-8558298 | Msa0754860:three_prime_UTR | 15.0% |
!! | TAATATAGTAAAAGATACAT+GGG | + | chr5_2:8558280-8558299 | Msa0754860:three_prime_UTR | 15.0% |
!!! | AATCCATTTACTTTGAAATT+TGG | + | chr5_2:8554518-8554537 | Msa0754860:CDS | 20.0% |
!! | TTGTAACTTTAAGTGTATTT+AGG | + | chr5_2:8555150-8555169 | Msa0754860:intron | 20.0% |
!! | TGTAACTTTAAGTGTATTTA+GGG | + | chr5_2:8555151-8555170 | Msa0754860:intron | 20.0% |
!!! | CGAATTTTTTTAGATCATTT+AGG | + | chr5_2:8555230-8555249 | Msa0754860:intron | 20.0% |
!!! | CATAATATTGAAAATTTTCC+AGG | + | chr5_2:8555262-8555281 | Msa0754860:intron | 20.0% |
!!! | TCTATTCATGAGTTTTTTTT+GGG | - | chr5_2:8556753-8556772 | None:intergenic | 20.0% |
!!! | ATCTATTCATGAGTTTTTTT+TGG | - | chr5_2:8556754-8556773 | None:intergenic | 20.0% |
!! | TTTCAAATATCACATTTGTT+TGG | + | chr5_2:8557105-8557124 | Msa0754860:intron | 20.0% |
!!! | TTATTTTTTCCTATGGTTAT+AGG | + | chr5_2:8557799-8557818 | Msa0754860:intron | 20.0% |
! | AAAAGATAAGAGTAGTATTG+AGG | + | chr5_2:8554455-8554474 | Msa0754860:five_prime_UTR | 25.0% |
! | TGTCCAAATTTCAAAGTAAA+TGG | - | chr5_2:8554524-8554543 | None:intergenic | 25.0% |
! | AAATTTGGACAAGTATTTAC+TGG | + | chr5_2:8554533-8554552 | Msa0754860:CDS | 25.0% |
! | GAGTAGTACCTAAATTTAAA+GGG | - | chr5_2:8554598-8554617 | None:intergenic | 25.0% |
! | AGAGTAGTACCTAAATTTAA+AGG | - | chr5_2:8554599-8554618 | None:intergenic | 25.0% |
! | AATCCATAGTAATGTGAAAT+TGG | - | chr5_2:8554644-8554663 | None:intergenic | 25.0% |
! | TTTCACATTACTATGGATTT+CGG | + | chr5_2:8554645-8554664 | Msa0754860:intron | 25.0% |
! | AAAAGGTAATAAGAGATACA+TGG | - | chr5_2:8554720-8554739 | None:intergenic | 25.0% |
!!! | TCTTATTCTGAATTTGTTGT+AGG | + | chr5_2:8554809-8554828 | Msa0754860:intron | 25.0% |
!!! | ACTTGTTTTTCATATAGTTG+AGG | + | chr5_2:8554985-8555004 | Msa0754860:intron | 25.0% |
! | TGAATTATTGATCATTTAGG+AGG | + | chr5_2:8555180-8555199 | Msa0754860:intron | 25.0% |
!! | AATATTGAAAATTTTCCAGG+AGG | + | chr5_2:8555265-8555284 | Msa0754860:intron | 25.0% |
! | ATCTATGATCTATAATACAC+AGG | - | chr5_2:8555325-8555344 | None:intergenic | 25.0% |
! | ATAACAGTTCATAAAGCATA+AGG | + | chr5_2:8555414-8555433 | Msa0754860:intron | 25.0% |
! | TAACAGTTCATAAAGCATAA+GGG | + | chr5_2:8555415-8555434 | Msa0754860:intron | 25.0% |
!!! | GTTTTTTAATATACAGTTCG+AGG | - | chr5_2:8555536-8555555 | None:intergenic | 25.0% |
! | AAAGAAAATATGGAAAGGAT+GGG | - | chr5_2:8555727-8555746 | None:intergenic | 25.0% |
! | TAAAGAAAATATGGAAAGGA+TGG | - | chr5_2:8555728-8555747 | None:intergenic | 25.0% |
! | ATGAAGTGGTAAAGAAAATA+TGG | - | chr5_2:8555737-8555756 | None:intergenic | 25.0% |
!! | ATTTTCTTTACCACTTCATA+TGG | + | chr5_2:8555738-8555757 | Msa0754860:intron | 25.0% |
!! | TTTTCTTTACCACTTCATAT+GGG | + | chr5_2:8555739-8555758 | Msa0754860:intron | 25.0% |
! | TTAAACATGAGATACACAAA+AGG | - | chr5_2:8555959-8555978 | None:intergenic | 25.0% |
! | TAAAAAATCCTCATTCCAAA+TGG | - | chr5_2:8556544-8556563 | None:intergenic | 25.0% |
!!! | ATTTGGAATGAGGATTTTTT+AGG | + | chr5_2:8556543-8556562 | Msa0754860:intron | 25.0% |
!!! | TTTGGAATGAGGATTTTTTA+GGG | + | chr5_2:8556544-8556563 | Msa0754860:intron | 25.0% |
! | AAAAACTCATGAATAGATGT+TGG | + | chr5_2:8556756-8556775 | Msa0754860:intron | 25.0% |
! | AAAACTCATGAATAGATGTT+GGG | + | chr5_2:8556757-8556776 | Msa0754860:intron | 25.0% |
!! | TTAAATTTTCTTGAGACAGA+GGG | - | chr5_2:8557146-8557165 | None:intergenic | 25.0% |
! | CTCAAGAAAATTTAAGTACA+AGG | + | chr5_2:8557151-8557170 | Msa0754860:intron | 25.0% |
!! | TGATATTTAAGATACATTGC+AGG | + | chr5_2:8557622-8557641 | Msa0754860:intron | 25.0% |
! | AAGAAAACAAAGAAGAAAGT+AGG | + | chr5_2:8557982-8558001 | Msa0754860:CDS | 25.0% |
!!! | AGATCTCCCTTAATTTTTTT+GGG | + | chr5_2:8558079-8558098 | Msa0754860:three_prime_UTR | 25.0% |
! | ACAAGACCCAAAAAAATTAA+GGG | - | chr5_2:8558088-8558107 | None:intergenic | 25.0% |
! | AACAAGACCCAAAAAAATTA+AGG | - | chr5_2:8558089-8558108 | None:intergenic | 25.0% |
! | ATAAGAGTAGTATTGAGGAA+TGG | + | chr5_2:8554460-8554479 | Msa0754860:exon | 30.0% |
GGAATGGAAAACAAAAATGA+AGG | + | chr5_2:8554476-8554495 | Msa0754860:exon | 30.0% | |
!!! | GTATTTACTGGTTTTGGAAT+CGG | + | chr5_2:8554545-8554564 | Msa0754860:CDS | 30.0% |
AATTGGAAGAGAATAAGGAA+GGG | - | chr5_2:8554627-8554646 | None:intergenic | 30.0% | |
AAATTGGAAGAGAATAAGGA+AGG | - | chr5_2:8554628-8554647 | None:intergenic | 30.0% | |
TGTGAAATTGGAAGAGAATA+AGG | - | chr5_2:8554632-8554651 | None:intergenic | 30.0% | |
CTTCCAATTTCACATTACTA+TGG | + | chr5_2:8554638-8554657 | Msa0754860:intron | 30.0% | |
!!! | TTTTTGAGTAGGGGAATTTT+GGG | - | chr5_2:8554697-8554716 | None:intergenic | 30.0% |
!!! | AGATACATGGTTTTTGAGTA+GGG | - | chr5_2:8554707-8554726 | None:intergenic | 30.0% |
CTCATAACTTGATTCAACAT+CGG | - | chr5_2:8554842-8554861 | None:intergenic | 30.0% | |
TTCATATAGTTGAGGAAGAT+TGG | + | chr5_2:8554993-8555012 | Msa0754860:intron | 30.0% | |
! | TGGTTTGAAAACCATTTTCA+TGG | - | chr5_2:8555366-8555385 | None:intergenic | 30.0% |
AACAGTTCATAAAGCATAAG+GGG | + | chr5_2:8555416-8555435 | Msa0754860:intron | 30.0% | |
GTGGTAAAGAAAATATGGAA+AGG | - | chr5_2:8555732-8555751 | None:intergenic | 30.0% | |
TGAAGAATGTTCACAAAACA+TGG | - | chr5_2:8555802-8555821 | None:intergenic | 30.0% | |
! | ACAAAGATGATGATGAAGTT+TGG | + | chr5_2:8556004-8556023 | Msa0754860:CDS | 30.0% |
CACTTTATGCTTCACATAAA+TGG | + | chr5_2:8556445-8556464 | Msa0754860:intron | 30.0% | |
!!! | AGGATTTTTTAGGGCTATAA+GGG | + | chr5_2:8556553-8556572 | Msa0754860:intron | 30.0% |
! | GCAAGAATCAAATTTTTCCT+AGG | - | chr5_2:8556681-8556700 | None:intergenic | 30.0% |
!!! | CATACTTTTCCAAAAGTGTT+TGG | + | chr5_2:8556700-8556719 | Msa0754860:intron | 30.0% |
! | TTTGGAAAACCAAACACTTT+TGG | - | chr5_2:8556712-8556731 | None:intergenic | 30.0% |
AAACTCATGAATAGATGTTG+GGG | + | chr5_2:8556758-8556777 | Msa0754860:intron | 30.0% | |
!!! | TTTTGGCGATAATGGAATTT+GGG | + | chr5_2:8556781-8556800 | Msa0754860:intron | 30.0% |
!!! | TTTTTTTCAAAACGGTATCC+TGG | + | chr5_2:8556907-8556926 | Msa0754860:intron | 30.0% |
!!! | TTTTTTCAAAACGGTATCCT+GGG | + | chr5_2:8556908-8556927 | Msa0754860:intron | 30.0% |
! | TAAATTTTCTTGAGACAGAG+GGG | - | chr5_2:8557145-8557164 | None:intergenic | 30.0% |
! | CTTAAATTTTCTTGAGACAG+AGG | - | chr5_2:8557147-8557166 | None:intergenic | 30.0% |
TTGTTGAGACTGGAAAAATA+TGG | + | chr5_2:8557203-8557222 | Msa0754860:intron | 30.0% | |
!! | TACTTTTTGGTGATTAACTG+TGG | + | chr5_2:8557357-8557376 | Msa0754860:intron | 30.0% |
AGAGAACAAAATACTTCAGA+TGG | + | chr5_2:8557661-8557680 | Msa0754860:CDS | 30.0% | |
GTTTCAAAACCTATAACCAT+AGG | - | chr5_2:8557811-8557830 | None:intergenic | 30.0% | |
AAAAATTAAGGGAGATCTCA+CGG | - | chr5_2:8558077-8558096 | None:intergenic | 30.0% | |
!!! | GAGATCTCCCTTAATTTTTT+TGG | + | chr5_2:8558078-8558097 | Msa0754860:three_prime_UTR | 30.0% |
CCTATACTATATCCTGTAAT+TGG | - | chr5_2:8558144-8558163 | None:intergenic | 30.0% | |
CCAATTACAGGATATAGTAT+AGG | + | chr5_2:8558141-8558160 | Msa0754860:three_prime_UTR | 30.0% | |
ACTAATTAGCATTAGATGAC+AGG | + | chr5_2:8558200-8558219 | Msa0754860:three_prime_UTR | 30.0% | |
GAATCAATGGAAGCAATTGT+TGG | - | chr5_2:8554350-8554369 | None:intergenic | 35.0% | |
!!! | GGACAAGTATTTACTGGTTT+TGG | + | chr5_2:8554539-8554558 | Msa0754860:CDS | 35.0% |
GTTGGAAGCCCTTTAAATTT+AGG | + | chr5_2:8554587-8554606 | Msa0754860:CDS | 35.0% | |
!! | TTTTGAGTAGGGGAATTTTG+GGG | - | chr5_2:8554696-8554715 | None:intergenic | 35.0% |
!!! | GTTTTTGAGTAGGGGAATTT+TGG | - | chr5_2:8554698-8554717 | None:intergenic | 35.0% |
!!! | GATACATGGTTTTTGAGTAG+GGG | - | chr5_2:8554706-8554725 | None:intergenic | 35.0% |
!!! | GAGATACATGGTTTTTGAGT+AGG | - | chr5_2:8554708-8554727 | None:intergenic | 35.0% |
! | ATCAAGTTATGAGTGCTACT+AGG | + | chr5_2:8554849-8554868 | Msa0754860:CDS | 35.0% |
! | TCAAGTTATGAGTGCTACTA+GGG | + | chr5_2:8554850-8554869 | Msa0754860:CDS | 35.0% |
TGGAGCTAAGAATATTGAAG+TGG | + | chr5_2:8555013-8555032 | Msa0754860:CDS | 35.0% | |
GGAGCTAAGAATATTGAAGT+GGG | + | chr5_2:8555014-8555033 | Msa0754860:CDS | 35.0% | |
AAGAATATTGAAGTGGGTGT+TGG | + | chr5_2:8555020-8555039 | Msa0754860:CDS | 35.0% | |
! | TTGAAAATTTTCCAGGAGGT+AGG | + | chr5_2:8555269-8555288 | Msa0754860:intron | 35.0% |
AGTTATGCACTCCATGAAAA+TGG | + | chr5_2:8555352-8555371 | Msa0754860:intron | 35.0% | |
! | AAATGGTTTTCAAACCACCT+CGG | + | chr5_2:8555369-8555388 | Msa0754860:intron | 35.0% |
TTGAAGCAGAAGATGTTGTT+AGG | + | chr5_2:8555608-8555627 | Msa0754860:intron | 35.0% | |
TGAAGCAGAAGATGTTGTTA+GGG | + | chr5_2:8555609-8555628 | Msa0754860:intron | 35.0% | |
AAATATGGAAAGGATGGGAT+AGG | - | chr5_2:8555722-8555741 | None:intergenic | 35.0% | |
CATCTTTGTCATTGTCATCT+AGG | - | chr5_2:8555993-8556012 | None:intergenic | 35.0% | |
AGTTATCTCAAGGTCTAGTA+GGG | + | chr5_2:8556140-8556159 | Msa0754860:intron | 35.0% | |
! | TCAACCAATGAACATTGGTT+TGG | + | chr5_2:8556165-8556184 | Msa0754860:CDS | 35.0% |
AAAGCCAAACCAATGTTCAT+TGG | - | chr5_2:8556172-8556191 | None:intergenic | 35.0% | |
GCTTCAATGATCAGAAGAAA+AGG | - | chr5_2:8556367-8556386 | None:intergenic | 35.0% | |
!! | ACCATTTTCCATTTGGAATG+AGG | + | chr5_2:8556533-8556552 | Msa0754860:intron | 35.0% |
TCCTCATTCCAAATGGAAAA+TGG | - | chr5_2:8556537-8556556 | None:intergenic | 35.0% | |
!!! | GAGGATTTTTTAGGGCTATA+AGG | + | chr5_2:8556552-8556571 | Msa0754860:intron | 35.0% |
!!! | ATTTTTTAGGGCTATAAGGG+AGG | + | chr5_2:8556556-8556575 | Msa0754860:intron | 35.0% |
! | ATGAATAGATGTTGGGGTTT+TGG | + | chr5_2:8556764-8556783 | Msa0754860:intron | 35.0% |
!!! | GTTTTGGCGATAATGGAATT+TGG | + | chr5_2:8556780-8556799 | Msa0754860:intron | 35.0% |
! | AATGTTCGCGTATTGTTTTC+AGG | - | chr5_2:8557044-8557063 | None:intergenic | 35.0% |
GCTGTTTAAATTGTTGAGAC+TGG | + | chr5_2:8557193-8557212 | Msa0754860:intron | 35.0% | |
AAATATGGTTATCTGCTGAG+AGG | + | chr5_2:8557218-8557237 | Msa0754860:intron | 35.0% | |
! | CTGTGTGACAATTTTAAACG+AGG | + | chr5_2:8557309-8557328 | Msa0754860:intron | 35.0% |
TGGTGATTAACTGTGGTATT+TGG | + | chr5_2:8557364-8557383 | Msa0754860:intron | 35.0% | |
GGTGATTAACTGTGGTATTT+GGG | + | chr5_2:8557365-8557384 | Msa0754860:intron | 35.0% | |
CAGAAAAAACTCACGAAAGA+GGG | - | chr5_2:8557576-8557595 | None:intergenic | 35.0% | |
TCAGAAAAAACTCACGAAAG+AGG | - | chr5_2:8557577-8557596 | None:intergenic | 35.0% | |
! | ATTTAAGATACATTGCAGGC+TGG | + | chr5_2:8557626-8557645 | Msa0754860:intron | 35.0% |
!!! | CTTGTTGATTTTTTTTGCGC+TGG | + | chr5_2:8557746-8557765 | Msa0754860:intron | 35.0% |
CAAGTTCTTCAATCATTTGC+TGG | - | chr5_2:8557835-8557854 | None:intergenic | 35.0% | |
GCAAATGATTGAAGAACTTG+TGG | + | chr5_2:8557835-8557854 | Msa0754860:CDS | 35.0% | |
AATGATTGAAGAACTTGTGG+AGG | + | chr5_2:8557838-8557857 | Msa0754860:CDS | 35.0% | |
! | AAACTTGAAGCTAGTTCTTC+AGG | + | chr5_2:8557914-8557933 | Msa0754860:CDS | 35.0% |
CACTCAAAACAATCAGTACA+TGG | - | chr5_2:8557959-8557978 | None:intergenic | 35.0% | |
! | ATGGGTTACTTACCAATTAC+AGG | + | chr5_2:8558129-8558148 | Msa0754860:three_prime_UTR | 35.0% |
GCATTAGATGACAGGTATTT+AGG | + | chr5_2:8558208-8558227 | Msa0754860:three_prime_UTR | 35.0% | |
AGATGACAGGTATTTAGGAA+TGG | + | chr5_2:8558213-8558232 | Msa0754860:three_prime_UTR | 35.0% | |
TAGTAAAAGATACATGGGCA+AGG | + | chr5_2:8558285-8558304 | Msa0754860:three_prime_UTR | 35.0% | |
AGTAAAAGATACATGGGCAA+GGG | + | chr5_2:8558286-8558305 | Msa0754860:three_prime_UTR | 35.0% | |
AGTCAAGCTGCTTGAATCAA+TGG | - | chr5_2:8554363-8554382 | None:intergenic | 40.0% | |
GAAGAGAATAAGGAAGGGAA+AGG | - | chr5_2:8554622-8554641 | None:intergenic | 40.0% | |
! | CAAGTTATGAGTGCTACTAG+GGG | + | chr5_2:8554851-8554870 | Msa0754860:CDS | 40.0% |
!! | ATGCATTTTCTGGTGTTAGC+AGG | + | chr5_2:8554882-8554901 | Msa0754860:CDS | 40.0% |
! | CAAGCCTTATCGCTTTAAGT+GGG | + | chr5_2:8555471-8555490 | Msa0754860:intron | 40.0% |
! | AAGCCTTATCGCTTTAAGTG+GGG | + | chr5_2:8555472-8555491 | Msa0754860:intron | 40.0% |
TCTGCAGTATCCAGAGATTT+AGG | - | chr5_2:8555653-8555672 | None:intergenic | 40.0% | |
TCTTTACCACTTCATATGGG+TGG | + | chr5_2:8555742-8555761 | Msa0754860:intron | 40.0% | |
CATAATCCACCCATATGAAG+TGG | - | chr5_2:8555751-8555770 | None:intergenic | 40.0% | |
TGAATTTGATTCAACACCCC+AGG | - | chr5_2:8555876-8555895 | None:intergenic | 40.0% | |
TCCCAGTTTACCGTTTAATC+CGG | + | chr5_2:8556033-8556052 | Msa0754860:CDS | 40.0% | |
TCAGCTGATCAGTTATCTCA+AGG | + | chr5_2:8556130-8556149 | Msa0754860:CDS | 40.0% | |
CAGTTATCTCAAGGTCTAGT+AGG | + | chr5_2:8556139-8556158 | Msa0754860:intron | 40.0% | |
TCTGCAAAATCCACTGTTGA+AGG | + | chr5_2:8556267-8556286 | Msa0754860:CDS | 40.0% | |
CTGCAAAATCCACTGTTGAA+GGG | + | chr5_2:8556268-8556287 | Msa0754860:CDS | 40.0% | |
! | TGCTGAGACCATTTTCCATT+TGG | + | chr5_2:8556526-8556545 | Msa0754860:intron | 40.0% |
GAGAAGGTAGGCTAAAATTC+AGG | + | chr5_2:8556607-8556626 | Msa0754860:intron | 40.0% | |
!! | GTGCCATTTGACTTGTATCA+CGG | + | chr5_2:8556653-8556672 | Msa0754860:intron | 40.0% |
!! | ATGAGTTGGTCATGTTGGTT+GGG | + | chr5_2:8556873-8556892 | Msa0754860:intron | 40.0% |
!!! | CTTGGTTTTTGGCCAAAACA+GGG | + | chr5_2:8556962-8556981 | Msa0754860:intron | 40.0% |
!!! | TTGGTTTTTGGCCAAAACAG+GGG | + | chr5_2:8556963-8556982 | Msa0754860:intron | 40.0% |
AAAAACTCACGAAAGAGGGA+AGG | - | chr5_2:8557572-8557591 | None:intergenic | 40.0% | |
TTCCAAGTCTATCAGTGTTG+AGG | - | chr5_2:8557703-8557722 | None:intergenic | 40.0% | |
TGGAGGAAAATGAGAAGCTT+CGG | + | chr5_2:8557855-8557874 | Msa0754860:CDS | 40.0% | |
! | AGAACTAGCTTCAAGTTTGC+TGG | - | chr5_2:8557912-8557931 | None:intergenic | 40.0% |
CTTGCACGTTATCGCTTAAA+GGG | + | chr5_2:8558040-8558059 | Msa0754860:three_prime_UTR | 40.0% | |
TTGCACGTTATCGCTTAAAG+GGG | + | chr5_2:8558041-8558060 | Msa0754860:three_prime_UTR | 40.0% | |
TGGTAAGTAACCCATTAGCA+GGG | - | chr5_2:8558124-8558143 | None:intergenic | 40.0% | |
TTGGTAAGTAACCCATTAGC+AGG | - | chr5_2:8558125-8558144 | None:intergenic | 40.0% | |
ATCGTATTCGTAGAACGTGG+CGG | - | chr5_2:8554390-8554409 | None:intergenic | 45.0% | |
AGCATCGTATTCGTAGAACG+TGG | - | chr5_2:8554393-8554412 | None:intergenic | 45.0% | |
! | TGTTGCAGTGAGTTGAGTTG+AGG | - | chr5_2:8554416-8554435 | None:intergenic | 45.0% |
!!! | ACTGGTTTTGGAATCGGTTG+TGG | + | chr5_2:8554551-8554570 | Msa0754860:CDS | 45.0% |
! | TTTGGAATCGGTTGTGGAGT+TGG | + | chr5_2:8554557-8554576 | Msa0754860:CDS | 45.0% |
!! | ATCGGTTGTGGAGTTGGTAT+CGG | + | chr5_2:8554563-8554582 | Msa0754860:CDS | 45.0% |
!! | GGGGAATTTTGGGGAGATTT+GGG | - | chr5_2:8554687-8554706 | None:intergenic | 45.0% |
!! | AGGGGAATTTTGGGGAGATT+TGG | - | chr5_2:8554688-8554707 | None:intergenic | 45.0% |
! | GGTGCAACTGATGCATTTTC+TGG | + | chr5_2:8554872-8554891 | Msa0754860:CDS | 45.0% |
!! | ATTGAAGTGGGTGTTGGATG+TGG | + | chr5_2:8555026-8555045 | Msa0754860:CDS | 45.0% |
! | GTTGGATGTGGAGTTGGTTT+CGG | + | chr5_2:8555038-8555057 | Msa0754860:CDS | 45.0% |
! | TTCCAGGAGGTAGGTTTTTG+TGG | + | chr5_2:8555278-8555297 | Msa0754860:intron | 45.0% |
TTCCACAAAAACCTACCTCC+TGG | - | chr5_2:8555283-8555302 | None:intergenic | 45.0% | |
CCACTTAAAGCGATAAGGCT+TGG | - | chr5_2:8555473-8555492 | None:intergenic | 45.0% | |
! | CCAAGCCTTATCGCTTTAAG+TGG | + | chr5_2:8555470-8555489 | Msa0754860:intron | 45.0% |
! | CTTATCGCTTTAAGTGGGGT+CGG | + | chr5_2:8555476-8555495 | Msa0754860:intron | 45.0% |
GTTCGAGGCATAGAACACTA+TGG | - | chr5_2:8555521-8555540 | None:intergenic | 45.0% | |
CCCGGATTAAACGGTAAACT+GGG | - | chr5_2:8556037-8556056 | None:intergenic | 45.0% | |
CCCAGTTTACCGTTTAATCC+GGG | + | chr5_2:8556034-8556053 | Msa0754860:CDS | 45.0% | |
ACCCGGATTAAACGGTAAAC+TGG | - | chr5_2:8556038-8556057 | None:intergenic | 45.0% | |
GGGTCTCAACCAATGAACAT+TGG | + | chr5_2:8556160-8556179 | Msa0754860:intron | 45.0% | |
!! | GTCGGCTGAAGTGTCTTTTA+TGG | - | chr5_2:8556206-8556225 | None:intergenic | 45.0% |
! | ACTTCAGCCGACTCTACATA+TGG | + | chr5_2:8556214-8556233 | Msa0754860:CDS | 45.0% |
TCGACTGCCATATGTAGAGT+CGG | - | chr5_2:8556224-8556243 | None:intergenic | 45.0% | |
ATATGGCAGTCGAACTGAGA+AGG | + | chr5_2:8556231-8556250 | Msa0754860:CDS | 45.0% | |
AATCCACTGTTGAAGGGAGA+AGG | + | chr5_2:8556274-8556293 | Msa0754860:CDS | 45.0% | |
!! | TGAGAGCTTACTGATTCGCT+GGG | - | chr5_2:8556307-8556326 | None:intergenic | 45.0% |
!! | ATGAGAGCTTACTGATTCGC+TGG | - | chr5_2:8556308-8556327 | None:intergenic | 45.0% |
TAGTGTGGAGATGAGAAGGT+AGG | + | chr5_2:8556595-8556614 | Msa0754860:intron | 45.0% | |
TCAAATGGCACAAAGCCCTT+TGG | - | chr5_2:8556644-8556663 | None:intergenic | 45.0% | |
GAGCCGTGATACAAGTCAAA+TGG | - | chr5_2:8556659-8556678 | None:intergenic | 45.0% | |
!! | TGTTGGGGTTTTGGCGATAA+TGG | + | chr5_2:8556773-8556792 | Msa0754860:intron | 45.0% |
!! | TACTGGTATGGTGGGTAGAA+AGG | + | chr5_2:8556846-8556865 | Msa0754860:intron | 45.0% |
GGTAGAAAGGATGGATGAGT+TGG | + | chr5_2:8556859-8556878 | Msa0754860:intron | 45.0% | |
!! | GATGGATGAGTTGGTCATGT+TGG | + | chr5_2:8556868-8556887 | Msa0754860:intron | 45.0% |
!! | GATGAGTTGGTCATGTTGGT+TGG | + | chr5_2:8556872-8556891 | Msa0754860:intron | 45.0% |
! | TGGGGTTTTCTTTAACACCC+AGG | - | chr5_2:8556928-8556947 | None:intergenic | 45.0% |
!! | CTCCCTATGAGCTTGGTTTT+TGG | + | chr5_2:8556951-8556970 | Msa0754860:intron | 45.0% |
GGCCAAAAACCAAGCTCATA+GGG | - | chr5_2:8556956-8556975 | None:intergenic | 45.0% | |
TGGCCAAAAACCAAGCTCAT+AGG | - | chr5_2:8556957-8556976 | None:intergenic | 45.0% | |
!!! | GCTTGGTTTTTGGCCAAAAC+AGG | + | chr5_2:8556961-8556980 | Msa0754860:intron | 45.0% |
! | GATGCAACATTCCCCTGTTT+TGG | - | chr5_2:8556977-8556996 | None:intergenic | 45.0% |
TAACAACAGACGATGCCTAC+AGG | - | chr5_2:8557287-8557306 | None:intergenic | 45.0% | |
GTCCTCAACACTGATAGACT+TGG | + | chr5_2:8557698-8557717 | Msa0754860:intron | 45.0% | |
!! | CTAGCTTCAAGTTTGCTGGA+TGG | - | chr5_2:8557908-8557927 | None:intergenic | 45.0% |
GCTTGCACGTTATCGCTTAA+AGG | + | chr5_2:8558039-8558058 | Msa0754860:three_prime_UTR | 45.0% | |
AAGGGAGATCTCACGGTTTA+GGG | - | chr5_2:8558070-8558089 | None:intergenic | 45.0% | |
TAAGGGAGATCTCACGGTTT+AGG | - | chr5_2:8558071-8558090 | None:intergenic | 45.0% | |
TACAAGTTGCCCCTGCTAAT+GGG | + | chr5_2:8558111-8558130 | Msa0754860:three_prime_UTR | 45.0% | |
GGTAAGTAACCCATTAGCAG+GGG | - | chr5_2:8558123-8558142 | None:intergenic | 45.0% | |
!! | TGTGGAGTTGGTATCGGTGT+TGG | + | chr5_2:8554569-8554588 | Msa0754860:CDS | 50.0% |
! | TGTGGAGTTGGTTTCGGTCA+TGG | + | chr5_2:8555044-8555063 | Msa0754860:CDS | 50.0% |
! | GTTGGTTTCGGTCATGGTGT+TGG | + | chr5_2:8555050-8555069 | Msa0754860:CDS | 50.0% |
! | TTCGGTCATGGTGTTGGAGT+TGG | + | chr5_2:8555056-8555075 | Msa0754860:CDS | 50.0% |
! | TTTTCAAACCACCTCGGCAC+TGG | + | chr5_2:8555375-8555394 | Msa0754860:intron | 50.0% |
CGACCCCACTTAAAGCGATA+AGG | - | chr5_2:8555478-8555497 | None:intergenic | 50.0% | |
TTTAAGTGGGGTCGGCTACA+AGG | + | chr5_2:8555484-8555503 | Msa0754860:intron | 50.0% | |
!! | ACAGGACTTGCTGTGAAACC+TGG | + | chr5_2:8555855-8555874 | Msa0754860:intron | 50.0% |
!! | CAGGACTTGCTGTGAAACCT+GGG | + | chr5_2:8555856-8555875 | Msa0754860:intron | 50.0% |
!! | AGGACTTGCTGTGAAACCTG+GGG | + | chr5_2:8555857-8555876 | Msa0754860:intron | 50.0% |
GGCAATGCACCCGGATTAAA+CGG | - | chr5_2:8556046-8556065 | None:intergenic | 50.0% | |
GTGGCACTTTGTAAGGATGC+TGG | - | chr5_2:8556067-8556086 | None:intergenic | 50.0% | |
! | GCATCCTTACAAAGTGCCAC+AGG | + | chr5_2:8556067-8556086 | Msa0754860:CDS | 50.0% |
TGCACCTGTGGCACTTTGTA+AGG | - | chr5_2:8556074-8556093 | None:intergenic | 50.0% | |
! | CCACACTACGAGTTGGAACT+TGG | - | chr5_2:8556583-8556602 | None:intergenic | 50.0% |
CCAAGTTCCAACTCGTAGTG+TGG | + | chr5_2:8556580-8556599 | Msa0754860:intron | 50.0% | |
CTCATCTCCACACTACGAGT+TGG | - | chr5_2:8556590-8556609 | None:intergenic | 50.0% | |
CTCGTAGTGTGGAGATGAGA+AGG | + | chr5_2:8556591-8556610 | Msa0754860:intron | 50.0% | |
TCAGGCAAAGTAGCCTCCAA+AGG | + | chr5_2:8556625-8556644 | Msa0754860:intron | 50.0% | |
CAGGCAAAGTAGCCTCCAAA+GGG | + | chr5_2:8556626-8556645 | Msa0754860:intron | 50.0% | |
AATGGCACAAAGCCCTTTGG+AGG | - | chr5_2:8556641-8556660 | None:intergenic | 50.0% | |
! | TGACTTGTATCACGGCTCCT+AGG | + | chr5_2:8556661-8556680 | Msa0754860:intron | 50.0% |
CACCACAATAGCAGCCATTG+CGG | - | chr5_2:8556822-8556841 | None:intergenic | 50.0% | |
!! | TGCTATTGTGGTGGTGCTAC+TGG | + | chr5_2:8556829-8556848 | Msa0754860:intron | 50.0% |
!! | TTGTGGTGGTGCTACTGGTA+TGG | + | chr5_2:8556834-8556853 | Msa0754860:intron | 50.0% |
!! | GGTATGGTGGGTAGAAAGGA+TGG | + | chr5_2:8556850-8556869 | Msa0754860:intron | 50.0% |
CAAGCTCATAGGGAGAGATG+GGG | - | chr5_2:8556946-8556965 | None:intergenic | 50.0% | |
CCAAGCTCATAGGGAGAGAT+GGG | - | chr5_2:8556947-8556966 | None:intergenic | 50.0% | |
ACCAAGCTCATAGGGAGAGA+TGG | - | chr5_2:8556948-8556967 | None:intergenic | 50.0% | |
TGCACATGTCCTCTTCCTGT+AGG | + | chr5_2:8557269-8557288 | Msa0754860:intron | 50.0% | |
ACTCACGAAAGAGGGAAGGT+GGG | - | chr5_2:8557568-8557587 | None:intergenic | 50.0% | |
AACTCACGAAAGAGGGAAGG+TGG | - | chr5_2:8557569-8557588 | None:intergenic | 50.0% | |
GCTTCGGCAGATACTAGTGA+AGG | + | chr5_2:8557871-8557890 | Msa0754860:CDS | 50.0% | |
AGGGAGATCTCACGGTTTAG+GGG | - | chr5_2:8558069-8558088 | None:intergenic | 50.0% | |
CATTAGCAGGGGCAACTTGT+AGG | - | chr5_2:8558112-8558131 | None:intergenic | 50.0% | |
CTACAAGTTGCCCCTGCTAA+TGG | + | chr5_2:8558110-8558129 | Msa0754860:three_prime_UTR | 50.0% | |
TACATGGGCAAGGGTCTGTT+TGG | + | chr5_2:8558295-8558314 | Msa0754860:three_prime_UTR | 50.0% | |
AAGGGTCTGTTTGGTTGGAG+AGG | + | chr5_2:8558304-8558323 | Msa0754860:three_prime_UTR | 50.0% | |
!! | GTGGGTGTTGGATGTGGAGT+TGG | + | chr5_2:8555032-8555051 | Msa0754860:CDS | 55.0% |
AATTGTAGCCTCCAGTGCCG+AGG | - | chr5_2:8555389-8555408 | None:intergenic | 55.0% | |
! | TTGTTAGGGTGCCACAACCG+CGG | + | chr5_2:8555623-8555642 | Msa0754860:intron | 55.0% |
ATTTAGGCATGCCGCGGTTG+TGG | - | chr5_2:8555637-8555656 | None:intergenic | 55.0% | |
CCAGAGATTTAGGCATGCCG+CGG | - | chr5_2:8555643-8555662 | None:intergenic | 55.0% | |
AAGGATGCTGGCAATGCACC+CGG | - | chr5_2:8556055-8556074 | None:intergenic | 55.0% | |
TCCAGAACTGACTGCACCTG+TGG | - | chr5_2:8556086-8556105 | None:intergenic | 55.0% | |
CCTCCTTCTCCCTTCAACAG+TGG | - | chr5_2:8556280-8556299 | None:intergenic | 55.0% | |
CCACTGTTGAAGGGAGAAGG+AGG | + | chr5_2:8556277-8556296 | Msa0754860:CDS | 55.0% | |
CTGTTGAAGGGAGAAGGAGG+AGG | + | chr5_2:8556280-8556299 | Msa0754860:CDS | 55.0% | |
ACAGCAATCGCAAGCCGCAA+TGG | + | chr5_2:8556805-8556824 | Msa0754860:intron | 55.0% | |
AGCCGCAATGGCTGCTATTG+TGG | + | chr5_2:8556817-8556836 | Msa0754860:intron | 55.0% | |
CGCAATGGCTGCTATTGTGG+TGG | + | chr5_2:8556820-8556839 | Msa0754860:intron | 55.0% | |
!! | TGGTGGTGCTACTGGTATGG+TGG | + | chr5_2:8556837-8556856 | Msa0754860:intron | 55.0% |
!! | GGTGGTGCTACTGGTATGGT+GGG | + | chr5_2:8556838-8556857 | Msa0754860:intron | 55.0% |
CCCATCTCTCCCTATGAGCT+TGG | + | chr5_2:8556944-8556963 | Msa0754860:intron | 55.0% | |
CAGACGATGCCTACAGGAAG+AGG | - | chr5_2:8557281-8557300 | None:intergenic | 55.0% | |
CTCACGAAAGAGGGAAGGTG+GGG | - | chr5_2:8557567-8557586 | None:intergenic | 55.0% | |
TGGGCAAGGGTCTGTTTGGT+TGG | + | chr5_2:8558299-8558318 | Msa0754860:three_prime_UTR | 55.0% | |
! | TCAAACCACCTCGGCACTGG+AGG | + | chr5_2:8555378-8555397 | Msa0754860:intron | 60.0% |
CCGCGGCATGCCTAAATCTC+TGG | + | chr5_2:8555640-8555659 | Msa0754860:intron | 60.0% | |
GCCACAGGTGCAGTCAGTTC+TGG | + | chr5_2:8556082-8556101 | Msa0754860:CDS | 60.0% | |
! | TGTAGCCTCCAGTGCCGAGG+TGG | - | chr5_2:8555386-8555405 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_2 | gene | 8554333 | 8558336 | 8554333 | ID=Msa0754860;Name=Msa0754860 |
chr5_2 | mRNA | 8554333 | 8558336 | 8554333 | ID=Msa0754860-mRNA-1;Parent=Msa0754860;Name=Msa0754860-mRNA-1;_AED=0.18;_eAED=0.18;_QI=146|0.85|0.75|1|0.71|0.75|8|333|292 |
chr5_2 | exon | 8554333 | 8554608 | 8554333 | ID=Msa0754860-mRNA-1:exon:3863;Parent=Msa0754860-mRNA-1 |
chr5_2 | exon | 8554831 | 8554919 | 8554831 | ID=Msa0754860-mRNA-1:exon:3864;Parent=Msa0754860-mRNA-1 |
chr5_2 | exon | 8555002 | 8555077 | 8555002 | ID=Msa0754860-mRNA-1:exon:3865;Parent=Msa0754860-mRNA-1 |
chr5_2 | exon | 8555859 | 8555908 | 8555859 | ID=Msa0754860-mRNA-1:exon:3866;Parent=Msa0754860-mRNA-1 |
chr5_2 | exon | 8555995 | 8556151 | 8555995 | ID=Msa0754860-mRNA-1:exon:3867;Parent=Msa0754860-mRNA-1 |
chr5_2 | exon | 8556161 | 8556315 | 8556161 | ID=Msa0754860-mRNA-1:exon:3868;Parent=Msa0754860-mRNA-1 |
chr5_2 | exon | 8557644 | 8557682 | 8557644 | ID=Msa0754860-mRNA-1:exon:3869;Parent=Msa0754860-mRNA-1 |
chr5_2 | exon | 8557821 | 8558336 | 8557821 | ID=Msa0754860-mRNA-1:exon:3870;Parent=Msa0754860-mRNA-1 |
chr5_2 | five_prime_UTR | 8554333 | 8554478 | 8554333 | ID=Msa0754860-mRNA-1:five_prime_utr;Parent=Msa0754860-mRNA-1 |
chr5_2 | CDS | 8554479 | 8554608 | 8554479 | ID=Msa0754860-mRNA-1:cds;Parent=Msa0754860-mRNA-1 |
chr5_2 | CDS | 8554831 | 8554919 | 8554831 | ID=Msa0754860-mRNA-1:cds;Parent=Msa0754860-mRNA-1 |
chr5_2 | CDS | 8555002 | 8555077 | 8555002 | ID=Msa0754860-mRNA-1:cds;Parent=Msa0754860-mRNA-1 |
chr5_2 | CDS | 8555859 | 8555908 | 8555859 | ID=Msa0754860-mRNA-1:cds;Parent=Msa0754860-mRNA-1 |
chr5_2 | CDS | 8555995 | 8556151 | 8555995 | ID=Msa0754860-mRNA-1:cds;Parent=Msa0754860-mRNA-1 |
chr5_2 | CDS | 8556161 | 8556315 | 8556161 | ID=Msa0754860-mRNA-1:cds;Parent=Msa0754860-mRNA-1 |
chr5_2 | CDS | 8557644 | 8557682 | 8557644 | ID=Msa0754860-mRNA-1:cds;Parent=Msa0754860-mRNA-1 |
chr5_2 | CDS | 8557821 | 8558003 | 8557821 | ID=Msa0754860-mRNA-1:cds;Parent=Msa0754860-mRNA-1 |
chr5_2 | three_prime_UTR | 8558004 | 8558336 | 8558004 | ID=Msa0754860-mRNA-1:three_prime_utr;Parent=Msa0754860-mRNA-1 |
Gene Sequence |
Protein sequence |