Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0058020 | XP_003589482.3 | 78.614 | 332 | 33 | 2 | 1 | 296 | 7 | 336 | 2.85e-177 | 513 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0058020 | A0A396JH99 | 78.614 | 332 | 33 | 2 | 1 | 296 | 7 | 336 | 1.36e-177 | 513 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa0058020 | 0.808440 | 3.094775e-50 | -8.615850e-47 |
| Msa0008850 | Msa0058020 | 0.809151 | 2.180388e-50 | -8.615850e-47 |
| Msa0011720 | Msa0058020 | 0.815379 | 9.529798e-52 | -8.615850e-47 |
| Msa0017120 | Msa0058020 | 0.830580 | 2.710420e-55 | -8.615850e-47 |
| Msa0030000 | Msa0058020 | 0.815820 | 7.600752e-52 | -8.615850e-47 |
| Msa0039200 | Msa0058020 | 0.805619 | 1.223328e-49 | -8.615850e-47 |
| Msa0047470 | Msa0058020 | 0.824038 | 1.001956e-53 | -8.615850e-47 |
| Msa0050570 | Msa0058020 | 0.806542 | 7.819472e-50 | -8.615850e-47 |
| Msa0050730 | Msa0058020 | 0.802302 | 5.983673e-49 | -8.615850e-47 |
| Msa0050760 | Msa0058020 | 0.800818 | 1.205547e-48 | -8.615850e-47 |
| Msa0053900 | Msa0058020 | 0.806702 | 7.233796e-50 | -8.615850e-47 |
| Msa0055280 | Msa0058020 | 0.811982 | 5.329769e-51 | -8.615850e-47 |
| Msa0055590 | Msa0058020 | 0.801727 | 7.856451e-49 | -8.615850e-47 |
| Msa0058020 | Msa0060600 | 0.820422 | 6.917956e-53 | -8.615850e-47 |
| Msa0058020 | Msa0065390 | 0.808332 | 3.262167e-50 | -8.615850e-47 |
| Msa0058020 | Msa0070990 | 0.806040 | 9.976991e-50 | -8.615850e-47 |
| Msa0058020 | Msa0086820 | 0.804286 | 2.323439e-49 | -8.615850e-47 |
| Msa0058020 | Msa0087880 | 0.800312 | 1.528964e-48 | -8.615850e-47 |
| Msa0058020 | Msa0089210 | 0.810063 | 1.388279e-50 | -8.615850e-47 |
| Msa0058020 | Msa0094420 | 0.802747 | 4.844170e-49 | -8.615850e-47 |
| Msa0058020 | Msa0097980 | 0.848483 | 5.957285e-60 | -8.615850e-47 |
| Msa0058020 | Msa0102410 | 0.895729 | 7.265133e-76 | -8.615850e-47 |
| Msa0058020 | Msa0105340 | 0.821394 | 4.133717e-53 | -8.615850e-47 |
| Msa0058020 | Msa0110710 | 0.808720 | 2.695656e-50 | -8.615850e-47 |
| Msa0058020 | Msa0125230 | 0.807148 | 5.822696e-50 | -8.615850e-47 |
| Msa0058020 | Msa0133670 | 0.811946 | 5.428297e-51 | -8.615850e-47 |
| Msa0058020 | Msa0133880 | 0.815138 | 1.077742e-51 | -8.615850e-47 |
| Msa0058020 | Msa0141670 | 0.848362 | 6.435001e-60 | -8.615850e-47 |
| Msa0058020 | Msa0148360 | 0.807947 | 3.939860e-50 | -8.615850e-47 |
| Msa0058020 | Msa0151690 | 0.822621 | 2.147471e-53 | -8.615850e-47 |
| Msa0058020 | Msa0157020 | 0.822317 | 2.527038e-53 | -8.615850e-47 |
| Msa0058020 | Msa0162030 | 0.809836 | 1.553710e-50 | -8.615850e-47 |
| Msa0058020 | Msa0162050 | 0.815897 | 7.306251e-52 | -8.615850e-47 |
| Msa0058020 | Msa0162070 | 0.814918 | 1.205885e-51 | -8.615850e-47 |
| Msa0058020 | Msa0169960 | 0.804797 | 1.818053e-49 | -8.615850e-47 |
| Msa0058020 | Msa0184120 | 0.800360 | 1.495212e-48 | -8.615850e-47 |
| Msa0058020 | Msa0185390 | 0.821203 | 4.575485e-53 | -8.615850e-47 |
| Msa0058020 | Msa0212370 | 0.832909 | 7.223214e-56 | -8.615850e-47 |
| Msa0058020 | Msa0221800 | 0.811433 | 7.018949e-51 | -8.615850e-47 |
| Msa0058020 | Msa0222070 | 0.802641 | 5.094653e-49 | -8.615850e-47 |
| Msa0058020 | Msa0222120 | 0.800922 | 1.148351e-48 | -8.615850e-47 |
| Msa0058020 | Msa0243690 | 0.813400 | 2.608678e-51 | -8.615850e-47 |
| Msa0058020 | Msa0252180 | 0.809544 | 1.795615e-50 | -8.615850e-47 |
| Msa0058020 | Msa0256170 | 0.802499 | 5.449324e-49 | -8.615850e-47 |
| Msa0058020 | Msa0257130 | 0.802246 | 6.144824e-49 | -8.615850e-47 |
| Msa0058020 | Msa0277530 | 0.822434 | 2.374326e-53 | -8.615850e-47 |
| Msa0058020 | Msa0284870 | 0.824902 | 6.275127e-54 | -8.615850e-47 |
| Msa0058020 | Msa0291040 | 0.833340 | 5.641479e-56 | -8.615850e-47 |
| Msa0058020 | Msa0296610 | 0.806472 | 8.091200e-50 | -8.615850e-47 |
| Msa0058020 | Msa0304870 | 0.800987 | 1.113422e-48 | -8.615850e-47 |
| Msa0058020 | Msa0306130 | 0.860893 | 1.503685e-63 | -8.615850e-47 |
| Msa0058020 | Msa0315480 | 0.805616 | 1.225014e-49 | -8.615850e-47 |
| Msa0058020 | Msa0330270 | 0.810107 | 1.358562e-50 | -8.615850e-47 |
| Msa0058020 | Msa0338570 | 0.828965 | 6.703944e-55 | -8.615850e-47 |
| Msa0058020 | Msa0341260 | 0.800597 | 1.337466e-48 | -8.615850e-47 |
| Msa0058020 | Msa0369750 | 0.801707 | 7.929396e-49 | -8.615850e-47 |
| Msa0058020 | Msa0371610 | 0.837719 | 4.402517e-57 | -8.615850e-47 |
| Msa0058020 | Msa0380420 | 0.805746 | 1.150500e-49 | -8.615850e-47 |
| Msa0058020 | Msa0411800 | 0.811114 | 8.231337e-51 | -8.615850e-47 |
| Msa0058020 | Msa0417150 | 0.808461 | 3.062412e-50 | -8.615850e-47 |
| Msa0058020 | Msa0420070 | 0.828351 | 9.433018e-55 | -8.615850e-47 |
| Msa0058020 | Msa0421800 | 0.804217 | 2.401584e-49 | -8.615850e-47 |
| Msa0058020 | Msa0427050 | 0.810864 | 9.325981e-51 | -8.615850e-47 |
| Msa0058020 | Msa0442880 | 0.804835 | 1.785142e-49 | -8.615850e-47 |
| Msa0058020 | Msa0467800 | 0.818905 | 1.535342e-52 | -8.615850e-47 |
| Msa0058020 | Msa0467880 | 0.816333 | 5.838905e-52 | -8.615850e-47 |
| Msa0058020 | Msa0473450 | 0.830031 | 3.692917e-55 | -8.615850e-47 |
| Msa0058020 | Msa0482580 | 0.809383 | 1.944140e-50 | -8.615850e-47 |
| Msa0058020 | Msa0486860 | 0.817519 | 3.161232e-52 | -8.615850e-47 |
| Msa0058020 | Msa0503740 | 0.811612 | 6.417239e-51 | -8.615850e-47 |
| Msa0058020 | Msa0509500 | 0.816371 | 5.725115e-52 | -8.615850e-47 |
| Msa0058020 | Msa0511890 | 0.834169 | 3.500702e-56 | -8.615850e-47 |
| Msa0058020 | Msa0514260 | 0.800186 | 1.622270e-48 | -8.615850e-47 |
| Msa0058020 | Msa0514990 | 0.813165 | 2.939018e-51 | -8.615850e-47 |
| Msa0058020 | Msa0524090 | 0.800875 | 1.173549e-48 | -8.615850e-47 |
| Msa0058020 | Msa0524120 | 0.806338 | 8.636064e-50 | -8.615850e-47 |
| Msa0058020 | Msa0530210 | 0.823059 | 1.698362e-53 | -8.615850e-47 |
| Msa0058020 | Msa0542040 | 0.826637 | 2.432303e-54 | -8.615850e-47 |
| Msa0058020 | Msa0546380 | 0.801950 | 7.070885e-49 | -8.615850e-47 |
| Msa0058020 | Msa0546740 | 0.803945 | 2.736216e-49 | -8.615850e-47 |
| Msa0058020 | Msa0547050 | 0.849025 | 4.213942e-60 | -8.615850e-47 |
| Msa0058020 | Msa0558890 | 0.829226 | 5.794053e-55 | -8.615850e-47 |
| Msa0058020 | Msa0560180 | 0.805457 | 1.322552e-49 | -8.615850e-47 |
| Msa0058020 | Msa0574170 | 0.800107 | 1.683058e-48 | -8.615850e-47 |
| Msa0058020 | Msa0575450 | 0.805716 | 1.167018e-49 | -8.615850e-47 |
| Msa0058020 | Msa0576420 | 0.803916 | 2.774182e-49 | -8.615850e-47 |
| Msa0058020 | Msa0598250 | 0.814036 | 1.890069e-51 | -8.615850e-47 |
| Msa0058020 | Msa0601780 | 0.839788 | 1.285127e-57 | -8.615850e-47 |
| Msa0058020 | Msa0606060 | 0.827547 | 1.473181e-54 | -8.615850e-47 |
| Msa0058020 | Msa0607280 | 0.800191 | 1.618137e-48 | -8.615850e-47 |
| Msa0058020 | Msa0611550 | 0.815821 | 7.596032e-52 | -8.615850e-47 |
| Msa0058020 | Msa0614230 | 0.806679 | 7.316319e-50 | -8.615850e-47 |
| Msa0058020 | Msa0619330 | 0.818295 | 2.112427e-52 | -8.615850e-47 |
| Msa0058020 | Msa0620640 | 0.818936 | 1.511271e-52 | -8.615850e-47 |
| Msa0058020 | Msa0621890 | 0.826633 | 2.437319e-54 | -8.615850e-47 |
| Msa0058020 | Msa0622390 | 0.810209 | 1.291306e-50 | -8.615850e-47 |
| Msa0058020 | Msa0630970 | 0.807889 | 4.053961e-50 | -8.615850e-47 |
| Msa0058020 | Msa0635990 | 0.801659 | 8.110646e-49 | -8.615850e-47 |
| Msa0058020 | Msa0642910 | 0.812886 | 3.383234e-51 | -8.615850e-47 |
| Msa0058020 | Msa0651790 | 0.808820 | 2.566718e-50 | -8.615850e-47 |
| Msa0058020 | Msa0653710 | 0.818851 | 1.579802e-52 | -8.615850e-47 |
| Msa0058020 | Msa0654060 | 0.834987 | 2.181416e-56 | -8.615850e-47 |
| Msa0058020 | Msa0662850 | 0.880823 | 3.996698e-70 | -8.615850e-47 |
| Msa0058020 | Msa0662860 | 0.831873 | 1.303704e-55 | -8.615850e-47 |
| Msa0058020 | Msa0681890 | 0.821528 | 3.848876e-53 | -8.615850e-47 |
| Msa0058020 | Msa0686610 | 0.829128 | 6.121334e-55 | -8.615850e-47 |
| Msa0058020 | Msa0694250 | 0.804715 | 1.890834e-49 | -8.615850e-47 |
| Msa0058020 | Msa0707780 | 0.809574 | 1.769147e-50 | -8.615850e-47 |
| Msa0058020 | Msa0709480 | 0.812531 | 4.046438e-51 | -8.615850e-47 |
| Msa0058020 | Msa0717510 | 0.806067 | 9.845404e-50 | -8.615850e-47 |
| Msa0058020 | Msa0719340 | 0.812252 | 4.655054e-51 | -8.615850e-47 |
| Msa0058020 | Msa0724050 | 0.809095 | 2.241378e-50 | -8.615850e-47 |
| Msa0058020 | Msa0726610 | 0.832851 | 7.465964e-56 | -8.615850e-47 |
| Msa0058020 | Msa0733000 | 0.800957 | 1.129467e-48 | -8.615850e-47 |
| Msa0058020 | Msa0736930 | 0.833139 | 6.330247e-56 | -8.615850e-47 |
| Msa0058020 | Msa0739570 | 0.850525 | 1.605336e-60 | -8.615850e-47 |
| Msa0058020 | Msa0739610 | 0.805681 | 1.187033e-49 | -8.615850e-47 |
| Msa0058020 | Msa0740420 | 0.814860 | 1.242288e-51 | -8.615850e-47 |
| Msa0058020 | Msa0744450 | 0.812488 | 4.133819e-51 | -8.615850e-47 |
| Msa0058020 | Msa0763880 | 0.825173 | 5.415253e-54 | -8.615850e-47 |
| Msa0058020 | Msa0763910 | 0.825303 | 5.046293e-54 | -8.615850e-47 |
| Msa0058020 | Msa0770430 | 0.809654 | 1.700474e-50 | -8.615850e-47 |
| Msa0058020 | Msa0771960 | 0.850175 | 2.012990e-60 | -8.615850e-47 |
| Msa0058020 | Msa0772150 | 0.822782 | 1.970278e-53 | -8.615850e-47 |
| Msa0058020 | Msa0781570 | 0.806703 | 7.230362e-50 | -8.615850e-47 |
| Msa0058020 | Msa0782330 | 0.864643 | 1.048975e-64 | -8.615850e-47 |
| Msa0058020 | Msa0790830 | 0.800471 | 1.418801e-48 | -8.615850e-47 |
| Msa0058020 | Msa0796450 | 0.814790 | 1.287557e-51 | -8.615850e-47 |
| Msa0058020 | Msa0803130 | 0.805647 | 1.206486e-49 | -8.615850e-47 |
| Msa0058020 | Msa0820670 | 0.809583 | 1.761349e-50 | -8.615850e-47 |
| Msa0058020 | Msa0841490 | 0.809091 | 2.245723e-50 | -8.615850e-47 |
| Msa0058020 | Msa0844100 | 0.825129 | 5.547902e-54 | -8.615850e-47 |
| Msa0058020 | Msa0851740 | 0.802029 | 6.811345e-49 | -8.615850e-47 |
| Msa0058020 | Msa0852730 | 0.801161 | 1.025828e-48 | -8.615850e-47 |
| Msa0058020 | Msa0860270 | 0.857840 | 1.240380e-62 | -8.615850e-47 |
| Msa0058020 | Msa0864950 | 0.819405 | 1.181771e-52 | -8.615850e-47 |
| Msa0058020 | Msa0877420 | 0.807655 | 4.545925e-50 | -8.615850e-47 |
| Msa0058020 | Msa0900320 | 0.814561 | 1.447029e-51 | -8.615850e-47 |
| Msa0058020 | Msa0907700 | 0.805108 | 1.564852e-49 | -8.615850e-47 |
| Msa0058020 | Msa0908170 | 0.813493 | 2.489878e-51 | -8.615850e-47 |
| Msa0058020 | Msa0922540 | 0.809968 | 1.455680e-50 | -8.615850e-47 |
| Msa0058020 | Msa0923910 | 0.801507 | 8.716890e-49 | -8.615850e-47 |
| Msa0058020 | Msa0925160 | 0.807987 | 3.864435e-50 | -8.615850e-47 |
| Msa0058020 | Msa0934830 | 0.818922 | 1.522333e-52 | -8.615850e-47 |
| Msa0058020 | Msa0958020 | 0.839925 | 1.183921e-57 | -8.615850e-47 |
| Msa0058020 | Msa0965960 | 0.805330 | 1.406191e-49 | -8.615850e-47 |
| Msa0058020 | Msa0971860 | 0.824899 | 6.286853e-54 | -8.615850e-47 |
| Msa0058020 | Msa0978000 | 0.850750 | 1.387233e-60 | -8.615850e-47 |
| Msa0058020 | Msa0979550 | 0.804563 | 2.034505e-49 | -8.615850e-47 |
| Msa0058020 | Msa0990520 | 0.823148 | 1.618494e-53 | -8.615850e-47 |
| Msa0058020 | Msa0992570 | 0.800154 | 1.646513e-48 | -8.615850e-47 |
| Msa0058020 | Msa1000470 | 0.809944 | 1.473205e-50 | -8.615850e-47 |
| Msa0058020 | Msa1002040 | 0.823448 | 1.378030e-53 | -8.615850e-47 |
| Msa0058020 | Msa1024580 | 0.820788 | 5.699326e-53 | -8.615850e-47 |
| Msa0058020 | Msa1030280 | 0.814739 | 1.321402e-51 | -8.615850e-47 |
| Msa0058020 | Msa1044040 | 0.821963 | 3.052955e-53 | -8.615850e-47 |
| Msa0058020 | Msa1069300 | 0.813372 | 2.647080e-51 | -8.615850e-47 |
| Msa0058020 | Msa1072080 | 0.804173 | 2.453320e-49 | -8.615850e-47 |
| Msa0058020 | Msa1079610 | 0.820156 | 7.958962e-53 | -8.615850e-47 |
| Msa0058020 | Msa1097380 | 0.801742 | 7.801793e-49 | -8.615850e-47 |
| Msa0058020 | Msa1120540 | 0.820660 | 6.099209e-53 | -8.615850e-47 |
| Msa0058020 | Msa1123340 | 0.817471 | 3.241167e-52 | -8.615850e-47 |
| Msa0058020 | Msa1125780 | 0.806012 | 1.011120e-49 | -8.615850e-47 |
| Msa0058020 | Msa1125950 | 0.805798 | 1.121873e-49 | -8.615850e-47 |
| Msa0058020 | Msa1157160 | 0.814854 | 1.246344e-51 | -8.615850e-47 |
| Msa0058020 | Msa1159100 | 0.806434 | 8.242125e-50 | -8.615850e-47 |
| Msa0058020 | Msa1166180 | 0.826525 | 2.586339e-54 | -8.615850e-47 |
| Msa0058020 | Msa1166280 | 0.822950 | 1.800969e-53 | -8.615850e-47 |
| Msa0058020 | Msa1168130 | 0.801470 | 8.869010e-49 | -8.615850e-47 |
| Msa0058020 | Msa1171340 | 0.814149 | 1.784303e-51 | -8.615850e-47 |
| Msa0058020 | Msa1195860 | 0.809621 | 1.728376e-50 | -8.615850e-47 |
| Msa0058020 | Msa1200920 | 0.806017 | 1.008858e-49 | -8.615850e-47 |
| Msa0058020 | Msa1215210 | 0.825116 | 5.586388e-54 | -8.615850e-47 |
| Msa0058020 | Msa1220230 | 0.822731 | 2.024722e-53 | -8.615850e-47 |
| Msa0058020 | Msa1248400 | 0.810093 | 1.367778e-50 | -8.615850e-47 |
| Msa0058020 | Msa1267860 | 0.833792 | 4.349708e-56 | -8.615850e-47 |
| Msa0058020 | Msa1295010 | 0.801551 | 8.536006e-49 | -8.615850e-47 |
| Msa0058020 | Msa1302150 | 0.803632 | 3.176964e-49 | -8.615850e-47 |
| Msa0058020 | Msa1310260 | 0.843554 | 1.305020e-58 | -8.615850e-47 |
| Msa0058020 | Msa1316170 | 0.850578 | 1.550839e-60 | -8.615850e-47 |
| Msa0058020 | Msa1325980 | 0.833172 | 6.212806e-56 | -8.615850e-47 |
| Msa0058020 | Msa1327820 | 0.838433 | 2.883516e-57 | -8.615850e-47 |
| Msa0058020 | Msa1355260 | 0.806110 | 9.644848e-50 | -8.615850e-47 |
| Msa0058020 | Msa1367390 | -0.803382 | 3.580456e-49 | -8.615850e-47 |
| Msa0058020 | Msa1367940 | 0.801161 | 1.025821e-48 | -8.615850e-47 |
| Msa0058020 | Msa1375630 | 0.808812 | 2.577232e-50 | -8.615850e-47 |
| Msa0058020 | Msa1376530 | 0.803507 | 3.373284e-49 | -8.615850e-47 |
| Msa0058020 | Msa1381130 | 0.819241 | 1.288196e-52 | -8.615850e-47 |
| Msa0058020 | Msa1390310 | 0.804326 | 2.278995e-49 | -8.615850e-47 |
| Msa0058020 | Msa1397540 | 0.806060 | 9.880136e-50 | -8.615850e-47 |
| Msa0058020 | Msa1412080 | 0.810329 | 1.216930e-50 | -8.615850e-47 |
| Msa0058020 | Msa1419110 | 0.802011 | 6.867079e-49 | -8.615850e-47 |
| Msa0058020 | Msa1422750 | 0.873412 | 1.500258e-67 | -8.615850e-47 |
| Msa0058020 | Msa1422760 | 0.829593 | 4.719398e-55 | -8.615850e-47 |
| Msa0058020 | Msa1435470 | 0.820756 | 5.795974e-53 | -8.615850e-47 |
| Msa0058020 | Msa1439230 | 0.803992 | 2.674759e-49 | -8.615850e-47 |
| Msa0058020 | Msa1440180 | 0.821044 | 4.978001e-53 | -8.615850e-47 |
| Msa0058020 | Msa1440600 | 0.803056 | 4.182627e-49 | -8.615850e-47 |
| Msa0058020 | Msa1444450 | 0.819370 | 1.203448e-52 | -8.615850e-47 |
| Msa0058020 | Msa1449740 | 0.820068 | 8.338740e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0058020 | MtrunA17_Chr1g0156581 | 78.614 | 332 | 33 | 2 | 1 | 296 | 7 | 336 | 0.0 | 513 |
| Msa0058020 | MtrunA17_Chr3g0142621 | 42.414 | 290 | 119 | 6 | 24 | 277 | 21 | 298 | 3.49e-43 | 156 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 52 sgRNAs with CRISPR-Local
Find 158 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCTCTTTGGGACCAATTT+TGG | 0.079863 | 1_2:+14252295 | None:intergenic |
| CTGCTTGCTATCAAAATTTC+TGG | 0.147565 | 1_2:+14251045 | None:intergenic |
| AGAACATCCAAAGAGATTTA+AGG | 0.181240 | 1_2:-14253459 | Msa0058020:CDS |
| ATTCTATTCCATTGAACTTA+TGG | 0.246157 | 1_2:+14252470 | None:intergenic |
| TGGTCCCAAAGAGGAGTTTC+TGG | 0.248234 | 1_2:-14252288 | Msa0058020:CDS |
| TTATGAACCTTAAATCTCTT+TGG | 0.248483 | 1_2:+14253452 | None:intergenic |
| CTCTGAGAGGGCAAAGTTAT+TGG | 0.268120 | 1_2:-14251429 | Msa0058020:CDS |
| CACACAAATAAACTCTTCTT+TGG | 0.278338 | 1_2:-14253725 | Msa0058020:CDS |
| TTCGCGACCGCGCTTCTTCA+TGG | 0.287658 | 1_2:+14252522 | None:intergenic |
| TCTTTGGTTTCTTTGAGAAT+TGG | 0.294523 | 1_2:+14253549 | None:intergenic |
| TCTTTGAATGAAACTATTAA+TGG | 0.309949 | 1_2:-14251461 | Msa0058020:CDS |
| AACAGGAAATTGGCCAAAAT+TGG | 0.342250 | 1_2:-14252308 | Msa0058020:CDS |
| CCATTCTTAGAAAGTAGAAT+TGG | 0.376515 | 1_2:-14253789 | Msa0058020:five_prime_UTR |
| TAGAACCAGAAACTCCTCTT+TGG | 0.387132 | 1_2:+14252283 | None:intergenic |
| CCAATTCTACTTTCTAAGAA+TGG | 0.397710 | 1_2:+14253789 | None:intergenic |
| ATGGTCTGAAAATTTGTAGA+TGG | 0.435172 | 1_2:+14251386 | None:intergenic |
| TCTGAGTTATGTCTAGCAAT+GGG | 0.437335 | 1_2:-14251314 | Msa0058020:CDS |
| TCACCTGAACGTAGCTTCCT+TGG | 0.441911 | 1_2:+14253283 | None:intergenic |
| ACCGCGTCTAATTCAACATC+TGG | 0.447105 | 1_2:+14251158 | None:intergenic |
| GAAGGCCTTGCATTGTGGCC+AGG | 0.455023 | 1_2:-14250865 | Msa0058020:CDS |
| TATATTCTAGCCTCGGTTCA+AGG | 0.456972 | 1_2:-14251536 | Msa0058020:intron |
| AAGAAGAACCATAAGTTCAA+TGG | 0.458103 | 1_2:-14252478 | Msa0058020:CDS |
| ACAAATAAACTCTTCTTTGG+TGG | 0.476631 | 1_2:-14253722 | Msa0058020:intron |
| TGGAATAGAATCTCTAGAAA+AGG | 0.477113 | 1_2:-14252458 | Msa0058020:CDS |
| TATTCGTGATTAACCGTCTC+AGG | 0.493289 | 1_2:+14251362 | None:intergenic |
| AGAACCAGAAACTCCTCTTT+GGG | 0.495390 | 1_2:+14252284 | None:intergenic |
| TGGTCTGAAAATTTGTAGAT+GGG | 0.502055 | 1_2:+14251387 | None:intergenic |
| TATTCCAGATTAAATATGAC+TGG | 0.510410 | 1_2:-14251212 | Msa0058020:intron |
| GTTCCAAGGAAGCTACGTTC+AGG | 0.516402 | 1_2:-14253286 | Msa0058020:intron |
| AGCTGAGACTCTGTATGCAT+TGG | 0.533537 | 1_2:-14252238 | Msa0058020:CDS |
| CTCTGAGTTATGTCTAGCAA+TGG | 0.542092 | 1_2:-14251315 | Msa0058020:CDS |
| CATCAGAAGGCCTTGCATTG+TGG | 0.543118 | 1_2:-14250870 | Msa0058020:intron |
| TATGACACTGAACACAAGCC+TGG | 0.552462 | 1_2:+14250847 | None:intergenic |
| TATCACAAAAGATGAGGAAG+AGG | 0.554801 | 1_2:-14252262 | Msa0058020:CDS |
| TGTCGTGAAAGTTGTTTACC+CGG | 0.562028 | 1_2:-14251503 | Msa0058020:CDS |
| TGAGAGGGCAAAGTTATTGG+TGG | 0.568374 | 1_2:-14251426 | Msa0058020:CDS |
| ACAAGCCTGGCCACAATGCA+AGG | 0.568663 | 1_2:+14250860 | None:intergenic |
| AAATGCAAGACACATGGAAG+AGG | 0.570704 | 1_2:+14253896 | None:intergenic |
| GTGATTAACCGTCTCAGGCA+TGG | 0.580444 | 1_2:+14251367 | None:intergenic |
| GCTATGGTGCTTCTGTTCCA+AGG | 0.586786 | 1_2:-14253300 | Msa0058020:CDS |
| AAGACTTTCGCCTTGAACCG+AGG | 0.587506 | 1_2:+14251526 | None:intergenic |
| CACAAATTTCACAATGCGAG+AGG | 0.599720 | 1_2:-14251184 | Msa0058020:CDS |
| TGGTTCTATCACAAAAGATG+AGG | 0.614760 | 1_2:-14252268 | Msa0058020:CDS |
| TGGTCAAGAACTCTCTGAGA+GGG | 0.620494 | 1_2:-14251441 | Msa0058020:CDS |
| AGTGATAAATGCAAGACACA+TGG | 0.623060 | 1_2:+14253890 | None:intergenic |
| GGCCAAAATTGGTCCCAAAG+AGG | 0.643574 | 1_2:-14252297 | Msa0058020:CDS |
| AAGACTCAAAACATGAAGCG+TGG | 0.654533 | 1_2:-14253764 | Msa0058020:exon |
| GGTCTGAAAATTTGTAGATG+GGG | 0.656195 | 1_2:+14251388 | None:intergenic |
| CTGAGTTATGTCTAGCAATG+GGG | 0.684708 | 1_2:-14251313 | Msa0058020:intron |
| ATGGTCAAGAACTCTCTGAG+AGG | 0.701193 | 1_2:-14251442 | Msa0058020:CDS |
| ATTACAGCCATGAAGAAGCG+CGG | 0.721076 | 1_2:-14252529 | Msa0058020:intron |
| ACCAGATGTTGAATTAGACG+CGG | 0.733787 | 1_2:-14251159 | Msa0058020:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTCATTTCTAAATTTTTA+TGG | - | chr1_2:14251343-14251362 | Msa0058020:CDS | 10.0% |
| !!! | TTATAAAATTTTAAACTGTA+TGG | - | chr1_2:14251999-14252018 | Msa0058020:intron | 10.0% |
| !!! | TATAAAATTTTAAACTGTAT+GGG | - | chr1_2:14252000-14252019 | Msa0058020:intron | 10.0% |
| !! | CTTAATATGAATTATTCAAA+TGG | + | chr1_2:14251796-14251815 | None:intergenic | 15.0% |
| !!! | TGTTTTTGTTAGTATATTAT+AGG | - | chr1_2:14251844-14251863 | Msa0058020:intron | 15.0% |
| !!! | TAATGTTATTTTCAATTTAC+AGG | - | chr1_2:14251910-14251929 | Msa0058020:intron | 15.0% |
| !!! | AATGTTATTTTCAATTTACA+GGG | - | chr1_2:14251911-14251930 | Msa0058020:intron | 15.0% |
| !! | TCTTATATAATATAGAAGAA+GGG | + | chr1_2:14252647-14252666 | None:intergenic | 15.0% |
| !!! | ATTAATCTTTTTTTTTTGTC+AGG | + | chr1_2:14252788-14252807 | None:intergenic | 15.0% |
| !! | CAAATAATCAAAAACTATTA+TGG | - | chr1_2:14252844-14252863 | Msa0058020:intron | 15.0% |
| !!! | ATATTACATTTTATATACAG+GGG | + | chr1_2:14252962-14252981 | None:intergenic | 15.0% |
| !!! | GATATTACATTTTATATACA+GGG | + | chr1_2:14252963-14252982 | None:intergenic | 15.0% |
| !! | AAACATGTTATTAATTACAA+AGG | + | chr1_2:14253489-14253508 | None:intergenic | 15.0% |
| !!! | TTTTGTTCTTAGTTTTTGAA+TGG | - | chr1_2:14251404-14251423 | Msa0058020:CDS | 20.0% |
| !!! | CTTTCTTTATATTTTTCCAT+AGG | - | chr1_2:14251531-14251550 | Msa0058020:intron | 20.0% |
| !! | GTTTGCCATTAAAAAAAAAA+TGG | + | chr1_2:14251739-14251758 | None:intergenic | 20.0% |
| !!! | TTTTTTAATGGCAAACATTT+TGG | - | chr1_2:14251743-14251762 | Msa0058020:intron | 20.0% |
| !! | ATAATTCATATTAAGCAGTT+AGG | - | chr1_2:14251801-14251820 | Msa0058020:intron | 20.0% |
| !! | CAAATTAACATAAACAAACA+AGG | + | chr1_2:14251950-14251969 | None:intergenic | 20.0% |
| !! | CTCTTATATAATATAGAAGA+AGG | + | chr1_2:14252648-14252667 | None:intergenic | 20.0% |
| !!! | TTTAAAAAGTTTTATGCTGA+TGG | + | chr1_2:14252820-14252839 | None:intergenic | 20.0% |
| !!! | GGATATTACATTTTATATAC+AGG | + | chr1_2:14252964-14252983 | None:intergenic | 20.0% |
| !! | CAAATATTTGTAATGATTCA+AGG | - | chr1_2:14253016-14253035 | Msa0058020:intron | 20.0% |
| !! | ACGAGTTAATAAATAAAGAA+AGG | + | chr1_2:14253144-14253163 | None:intergenic | 20.0% |
| !! | TCTTTGAATGAAACTATTAA+TGG | - | chr1_2:14253268-14253287 | Msa0058020:intron | 20.0% |
| !! | AAAGTATATAGATTTCAGAA+TGG | + | chr1_2:14253463-14253482 | None:intergenic | 20.0% |
| !! | ATGAATGAACAAGTAAAAAA+TGG | - | chr1_2:14253719-14253738 | Msa0058020:intron | 20.0% |
| ! | TTATGAACCTTAAATCTCTT+TGG | + | chr1_2:14251280-14251299 | None:intergenic | 25.0% |
| ! | TTAAAAAAAAAATGGCCCTT+TGG | + | chr1_2:14251731-14251750 | None:intergenic | 25.0% |
| !!! | AAGGGCCATTTTTTTTTTAA+TGG | - | chr1_2:14251731-14251750 | Msa0058020:intron | 25.0% |
| ! | ATTGAAAATAACATTATCCG+CGG | + | chr1_2:14251906-14251925 | None:intergenic | 25.0% |
| !! | CTTTTCTTTATCATGTAAGA+TGG | + | chr1_2:14252234-14252253 | None:intergenic | 25.0% |
| ! | ATTCTATTCCATTGAACTTA+TGG | + | chr1_2:14252262-14252281 | None:intergenic | 25.0% |
| ! | GTATTCTAATAAGACATTTG+TGG | - | chr1_2:14252318-14252337 | Msa0058020:intron | 25.0% |
| !!! | TTTTTTTTCCACCTTTAACT+TGG | - | chr1_2:14252380-14252399 | Msa0058020:intron | 25.0% |
| ! | AATGCAAAATTCCAAGTTAA+AGG | + | chr1_2:14252394-14252413 | None:intergenic | 25.0% |
| !! | ATTTTGCATTTTGTAGAAAC+AGG | - | chr1_2:14252404-14252423 | Msa0058020:intron | 25.0% |
| !! | ATTTTGTAGAAACAGGAAAT+TGG | - | chr1_2:14252411-14252430 | Msa0058020:intron | 25.0% |
| !! | CATTTTAAATGTAGAGAAGT+GGG | + | chr1_2:14252742-14252761 | None:intergenic | 25.0% |
| !! | ACATTTTAAATGTAGAGAAG+TGG | + | chr1_2:14252743-14252762 | None:intergenic | 25.0% |
| !! | AATATCCCTTATGACTTTTA+AGG | - | chr1_2:14252977-14252996 | Msa0058020:intron | 25.0% |
| ! | ATCTACCTTAAAAGTCATAA+GGG | + | chr1_2:14252985-14253004 | None:intergenic | 25.0% |
| ! | AATATATGGCAAAAGAAAGT+GGG | + | chr1_2:14253179-14253198 | None:intergenic | 25.0% |
| ! | TATTCCAGATTAAATATGAC+TGG | - | chr1_2:14253517-14253536 | Msa0058020:CDS | 25.0% |
| ! | AAAACAAGAATTTACCACTT+AGG | + | chr1_2:14253770-14253789 | None:intergenic | 25.0% |
| !!! | TGTTTTGATCATAAAAACAC+AGG | - | chr1_2:14253784-14253803 | Msa0058020:five_prime_UTR | 25.0% |
| ! | CCAATTCTACTTTCTAAGAA+TGG | + | chr1_2:14250943-14250962 | None:intergenic | 30.0% |
| CCATTCTTAGAAAGTAGAAT+TGG | - | chr1_2:14250940-14250959 | Msa0058020:intron | 30.0% | |
| CACACAAATAAACTCTTCTT+TGG | - | chr1_2:14251004-14251023 | Msa0058020:intron | 30.0% | |
| ACAAATAAACTCTTCTTTGG+TGG | - | chr1_2:14251007-14251026 | Msa0058020:intron | 30.0% | |
| ACCAAACAAAACTCATTTGT+CGG | - | chr1_2:14251065-14251084 | Msa0058020:intron | 30.0% | |
| ! | TCTTTGGTTTCTTTGAGAAT+TGG | + | chr1_2:14251183-14251202 | None:intergenic | 30.0% |
| !! | CTAACTTTTTCTTGCTTCTT+TGG | + | chr1_2:14251199-14251218 | None:intergenic | 30.0% |
| AGAACATCCAAAGAGATTTA+AGG | - | chr1_2:14251270-14251289 | Msa0058020:intron | 30.0% | |
| ! | TAGTTTTTGAATGGATGCTA+TGG | - | chr1_2:14251413-14251432 | Msa0058020:CDS | 30.0% |
| TAAAACTCATAGAGTTCCTA+TGG | + | chr1_2:14251550-14251569 | None:intergenic | 30.0% | |
| !!! | TACTTACAAAAGTGCTTTTG+TGG | - | chr1_2:14252061-14252080 | Msa0058020:intron | 30.0% |
| TTCATGGCTGTAATTTCAAA+AGG | + | chr1_2:14252194-14252213 | None:intergenic | 30.0% | |
| AAGAAGAACCATAAGTTCAA+TGG | - | chr1_2:14252251-14252270 | Msa0058020:CDS | 30.0% | |
| ! | TGGAATAGAATCTCTAGAAA+AGG | - | chr1_2:14252271-14252290 | Msa0058020:CDS | 30.0% |
| TACTTAGAAGACAAAGCAAA+AGG | + | chr1_2:14252358-14252377 | None:intergenic | 30.0% | |
| ! | AAGTTCCTTGATAATATGGT+TGG | + | chr1_2:14252541-14252560 | None:intergenic | 30.0% |
| ! | CATCAAGTTCCTTGATAATA+TGG | + | chr1_2:14252545-14252564 | None:intergenic | 30.0% |
| CATATTATCAAGGAACTTGA+TGG | - | chr1_2:14252543-14252562 | Msa0058020:intron | 30.0% | |
| AATGTTAATGCTTCTCTTGA+AGG | - | chr1_2:14252612-14252631 | Msa0058020:intron | 30.0% | |
| AGACATTGCATAATATATGC+AGG | - | chr1_2:14252710-14252729 | Msa0058020:intron | 30.0% | |
| GACATTGCATAATATATGCA+GGG | - | chr1_2:14252711-14252730 | Msa0058020:intron | 30.0% | |
| ACATTGCATAATATATGCAG+GGG | - | chr1_2:14252712-14252731 | Msa0058020:intron | 30.0% | |
| ACAATTTAATTGTGGAGAAG+TGG | - | chr1_2:14252913-14252932 | Msa0058020:intron | 30.0% | |
| GATCTACCTTAAAAGTCATA+AGG | + | chr1_2:14252986-14253005 | None:intergenic | 30.0% | |
| GAATATATGGCAAAAGAAAG+TGG | + | chr1_2:14253180-14253199 | None:intergenic | 30.0% | |
| TGGTCTGAAAATTTGTAGAT+GGG | + | chr1_2:14253345-14253364 | None:intergenic | 30.0% | |
| ATGGTCTGAAAATTTGTAGA+TGG | + | chr1_2:14253346-14253365 | None:intergenic | 30.0% | |
| TTGTCCAGTCATATTTAATC+TGG | + | chr1_2:14253524-14253543 | None:intergenic | 30.0% | |
| !! | GCTATTAGTACTGATGTTAT+TGG | - | chr1_2:14253639-14253658 | Msa0058020:intron | 30.0% |
| !! | TAGGACAATTTGTTGTTTGT+GGG | + | chr1_2:14253751-14253770 | None:intergenic | 30.0% |
| !! | TTAGGACAATTTGTTGTTTG+TGG | + | chr1_2:14253752-14253771 | None:intergenic | 30.0% |
| AAACAACAAATTGTCCTAAG+TGG | - | chr1_2:14253753-14253772 | Msa0058020:CDS | 30.0% | |
| AGTGATAAATGCAAGACACA+TGG | + | chr1_2:14250842-14250861 | None:intergenic | 35.0% | |
| !!! | ACCGACAAATGAGTTTTGTT+TGG | + | chr1_2:14251069-14251088 | None:intergenic | 35.0% |
| !! | AGCAGCTTTTGATTAACCAA+AGG | - | chr1_2:14251712-14251731 | Msa0058020:intron | 35.0% |
| !! | GCAGCTTTTGATTAACCAAA+GGG | - | chr1_2:14251713-14251732 | Msa0058020:intron | 35.0% |
| ! | TCACGAATAATTTTTGTCCG+CGG | - | chr1_2:14251886-14251905 | Msa0058020:intron | 35.0% |
| GCAAAATTCCAAGTTAAAGG+TGG | + | chr1_2:14252391-14252410 | None:intergenic | 35.0% | |
| AACAGGAAATTGGCCAAAAT+TGG | - | chr1_2:14252421-14252440 | Msa0058020:intron | 35.0% | |
| ! | TGGTTCTATCACAAAAGATG+AGG | - | chr1_2:14252461-14252480 | Msa0058020:CDS | 35.0% |
| TATCACAAAAGATGAGGAAG+AGG | - | chr1_2:14252467-14252486 | Msa0058020:CDS | 35.0% | |
| TTAAATGTAGAGAAGTGGGT+CGG | + | chr1_2:14252738-14252757 | None:intergenic | 35.0% | |
| GGCTACTTGGCAAAAAAAAA+GGG | + | chr1_2:14252876-14252895 | None:intergenic | 35.0% | |
| AGGCTACTTGGCAAAAAAAA+AGG | + | chr1_2:14252877-14252896 | None:intergenic | 35.0% | |
| GAGCTCACACAATTTAATTG+TGG | - | chr1_2:14252905-14252924 | Msa0058020:intron | 35.0% | |
| ! | TACATTTTATATACAGGGGC+CGG | + | chr1_2:14252958-14252977 | None:intergenic | 35.0% |
| TTTGCCATATATTCTAGCCT+CGG | - | chr1_2:14253186-14253205 | Msa0058020:intron | 35.0% | |
| !! | GTGATTTTTGAAGATTCTCC+GGG | + | chr1_2:14253247-14253266 | None:intergenic | 35.0% |
| !! | CGTGATTTTTGAAGATTCTC+CGG | + | chr1_2:14253248-14253267 | None:intergenic | 35.0% |
| GGTCTGAAAATTTGTAGATG+GGG | + | chr1_2:14253344-14253363 | None:intergenic | 35.0% | |
| ATATCGCGAAAAAGTTGCAT+TGG | - | chr1_2:14253387-14253406 | Msa0058020:intron | 35.0% | |
| TCTGAGTTATGTCTAGCAAT+GGG | - | chr1_2:14253415-14253434 | Msa0058020:intron | 35.0% | |
| !! | CTGCTTGCTATCAAAATTTC+TGG | + | chr1_2:14253687-14253706 | None:intergenic | 35.0% |
| !! | CTTTCTGTTGTTTCATCAGA+AGG | - | chr1_2:14253846-14253865 | Msa0058020:five_prime_UTR | 35.0% |
| AAATGCAAGACACATGGAAG+AGG | + | chr1_2:14250836-14250855 | None:intergenic | 40.0% | |
| AAGACTCAAAACATGAAGCG+TGG | - | chr1_2:14250965-14250984 | Msa0058020:intron | 40.0% | |
| AGAACCAGAAACTCCTCTTT+GGG | + | chr1_2:14252448-14252467 | None:intergenic | 40.0% | |
| TAGAACCAGAAACTCCTCTT+TGG | + | chr1_2:14252449-14252468 | None:intergenic | 40.0% | |
| TGGCTCCAACCATATTATCA+AGG | - | chr1_2:14252533-14252552 | Msa0058020:intron | 40.0% | |
| ACTTGATGGAGAACCTTTCA+TGG | - | chr1_2:14252557-14252576 | Msa0058020:intron | 40.0% | |
| ! | ACTGAGGAGTTTTCCATGAA+AGG | + | chr1_2:14252573-14252592 | None:intergenic | 40.0% |
| !!! | TTTTTTGTCAGGTAGCCTAG+TGG | + | chr1_2:14252777-14252796 | None:intergenic | 40.0% |
| !!! | TTTTTTGCCAAGTAGCCTAG+TGG | - | chr1_2:14252879-14252898 | Msa0058020:intron | 40.0% |
| ! | ACATTTTATATACAGGGGCC+GGG | + | chr1_2:14252957-14252976 | None:intergenic | 40.0% |
| TGAACCGAGGCTAGAATATA+TGG | + | chr1_2:14253193-14253212 | None:intergenic | 40.0% | |
| TATATTCTAGCCTCGGTTCA+AGG | - | chr1_2:14253193-14253212 | Msa0058020:intron | 40.0% | |
| TGTCGTGAAAGTTGTTTACC+CGG | - | chr1_2:14253226-14253245 | Msa0058020:intron | 40.0% | |
| TATTCGTGATTAACCGTCTC+AGG | + | chr1_2:14253370-14253389 | None:intergenic | 40.0% | |
| CTCTGAGTTATGTCTAGCAA+TGG | - | chr1_2:14253414-14253433 | Msa0058020:intron | 40.0% | |
| CTGAGTTATGTCTAGCAATG+GGG | - | chr1_2:14253416-14253435 | Msa0058020:intron | 40.0% | |
| CACAAATTTCACAATGCGAG+AGG | - | chr1_2:14253545-14253564 | Msa0058020:CDS | 40.0% | |
| ACCAGATGTTGAATTAGACG+CGG | - | chr1_2:14253570-14253589 | Msa0058020:intron | 40.0% | |
| ATTACAGCCATGAAGAAGCG+CGG | - | chr1_2:14252200-14252219 | Msa0058020:intron | 45.0% | |
| !!! | CTCCTCTTTGGGACCAATTT+TGG | + | chr1_2:14252437-14252456 | None:intergenic | 45.0% |
| AGCTGAGACTCTGTATGCAT+TGG | - | chr1_2:14252491-14252510 | Msa0058020:CDS | 45.0% | |
| GCAACAATGTTTCCTCACAG+TGG | - | chr1_2:14252513-14252532 | Msa0058020:CDS | 45.0% | |
| ! | GGAAAACTCCTCAGTTTTGC+AGG | - | chr1_2:14252578-14252597 | Msa0058020:intron | 45.0% |
| CTTCATGTCCTGCAAAACTG+AGG | + | chr1_2:14252589-14252608 | None:intergenic | 45.0% | |
| ! | CTCAGTTTTGCAGGACATGA+AGG | - | chr1_2:14252587-14252606 | Msa0058020:intron | 45.0% |
| TGCCAATTGAGCTAAGCTCA+CGG | + | chr1_2:14252689-14252708 | None:intergenic | 45.0% | |
| ! | CATTTTATATACAGGGGCCG+GGG | + | chr1_2:14252956-14252975 | None:intergenic | 45.0% |
| ATGGTCAAGAACTCTCTGAG+AGG | - | chr1_2:14253287-14253306 | Msa0058020:CDS | 45.0% | |
| ! | TGGTCAAGAACTCTCTGAGA+GGG | - | chr1_2:14253288-14253307 | Msa0058020:CDS | 45.0% |
| ! | CTCTGAGAGGGCAAAGTTAT+TGG | - | chr1_2:14253300-14253319 | Msa0058020:CDS | 45.0% |
| TGAGAGGGCAAAGTTATTGG+TGG | - | chr1_2:14253303-14253322 | Msa0058020:CDS | 45.0% | |
| ! | TTTTCAGACCATGCCTGAGA+CGG | - | chr1_2:14253354-14253373 | Msa0058020:intron | 45.0% |
| ACCGCGTCTAATTCAACATC+TGG | + | chr1_2:14253574-14253593 | None:intergenic | 45.0% | |
| GATGTTGAATTAGACGCGGT+AGG | - | chr1_2:14253574-14253593 | Msa0058020:intron | 45.0% | |
| GTACCATGCGTTCACATTTC+AGG | - | chr1_2:14253661-14253680 | Msa0058020:intron | 45.0% | |
| TATGACACTGAACACAAGCC+TGG | + | chr1_2:14253885-14253904 | None:intergenic | 45.0% | |
| GCTATGGTGCTTCTGTTCCA+AGG | - | chr1_2:14251429-14251448 | Msa0058020:CDS | 50.0% | |
| GTTCCAAGGAAGCTACGTTC+AGG | - | chr1_2:14251443-14251462 | Msa0058020:CDS | 50.0% | |
| TCACCTGAACGTAGCTTCCT+TGG | + | chr1_2:14251449-14251468 | None:intergenic | 50.0% | |
| GGCCAAAATTGGTCCCAAAG+AGG | - | chr1_2:14252432-14252451 | Msa0058020:intron | 50.0% | |
| TGGTCCCAAAGAGGAGTTTC+TGG | - | chr1_2:14252441-14252460 | Msa0058020:CDS | 50.0% | |
| ATATGGTTGGAGCCACTGTG+AGG | + | chr1_2:14252528-14252547 | None:intergenic | 50.0% | |
| CCAATTGAGCTAAGCTCACG+GGG | + | chr1_2:14252687-14252706 | None:intergenic | 50.0% | |
| GCCAATTGAGCTAAGCTCAC+GGG | + | chr1_2:14252688-14252707 | None:intergenic | 50.0% | |
| ! | TTGTGTGAGCTCTAGCCACT+AGG | + | chr1_2:14252897-14252916 | None:intergenic | 50.0% |
| AAGACTTTCGCCTTGAACCG+AGG | + | chr1_2:14253206-14253225 | None:intergenic | 50.0% | |
| GTGATTAACCGTCTCAGGCA+TGG | + | chr1_2:14253365-14253384 | None:intergenic | 50.0% | |
| TGGCCTGAAATGTGAACGCA+TGG | + | chr1_2:14253667-14253686 | None:intergenic | 50.0% | |
| CATCAGAAGGCCTTGCATTG+TGG | - | chr1_2:14253859-14253878 | Msa0058020:five_prime_UTR | 50.0% | |
| CCCCGTGAGCTTAGCTCAAT+TGG | - | chr1_2:14252684-14252703 | Msa0058020:intron | 55.0% | |
| ATGTGTGAGCTCCAGCCACT+AGG | - | chr1_2:14252759-14252778 | Msa0058020:intron | 55.0% | |
| TTGTCAGGTAGCCTAGTGGC+TGG | + | chr1_2:14252773-14252792 | None:intergenic | 55.0% | |
| GCTCTAGCCACTAGGCTACT+TGG | + | chr1_2:14252889-14252908 | None:intergenic | 55.0% | |
| GTGGAGAAGTGGTGTGTCTG+AGG | - | chr1_2:14252924-14252943 | Msa0058020:intron | 55.0% | |
| ! | TGTGTCTGAGGTTCGAACCC+CGG | - | chr1_2:14252936-14252955 | Msa0058020:intron | 55.0% |
| ACAAGCCTGGCCACAATGCA+AGG | + | chr1_2:14253872-14253891 | None:intergenic | 55.0% | |
| TTCGCGACCGCGCTTCTTCA+TGG | + | chr1_2:14252210-14252229 | None:intergenic | 60.0% | |
| GAAGGCCTTGCATTGTGGCC+AGG | - | chr1_2:14253864-14253883 | Msa0058020:five_prime_UTR | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 14250807 | 14253944 | 14250807 | ID=Msa0058020;Name=Msa0058020 |
| chr1_2 | mRNA | 14250807 | 14253944 | 14250807 | ID=Msa0058020-mRNA-1;Parent=Msa0058020;Name=Msa0058020-mRNA-1;_AED=0.16;_eAED=0.16;_QI=170|0.62|0.55|1|1|1|9|0|296 |
| chr1_2 | exon | 14250807 | 14250886 | 14250807 | ID=Msa0058020-mRNA-1:exon:5713;Parent=Msa0058020-mRNA-1 |
| chr1_2 | exon | 14251011 | 14251068 | 14251011 | ID=Msa0058020-mRNA-1:exon:5712;Parent=Msa0058020-mRNA-1 |
| chr1_2 | exon | 14251160 | 14251226 | 14251160 | ID=Msa0058020-mRNA-1:exon:5711;Parent=Msa0058020-mRNA-1 |
| chr1_2 | exon | 14251314 | 14251548 | 14251314 | ID=Msa0058020-mRNA-1:exon:5710;Parent=Msa0058020-mRNA-1 |
| chr1_2 | exon | 14252220 | 14252331 | 14252220 | ID=Msa0058020-mRNA-1:exon:5709;Parent=Msa0058020-mRNA-1 |
| chr1_2 | exon | 14252438 | 14252544 | 14252438 | ID=Msa0058020-mRNA-1:exon:5708;Parent=Msa0058020-mRNA-1 |
| chr1_2 | exon | 14253287 | 14253335 | 14253287 | ID=Msa0058020-mRNA-1:exon:5707;Parent=Msa0058020-mRNA-1 |
| chr1_2 | exon | 14253448 | 14253575 | 14253448 | ID=Msa0058020-mRNA-1:exon:5706;Parent=Msa0058020-mRNA-1 |
| chr1_2 | exon | 14253723 | 14253944 | 14253723 | ID=Msa0058020-mRNA-1:exon:5705;Parent=Msa0058020-mRNA-1 |
| chr1_2 | five_prime_UTR | 14253775 | 14253944 | 14253775 | ID=Msa0058020-mRNA-1:five_prime_utr;Parent=Msa0058020-mRNA-1 |
| chr1_2 | CDS | 14253723 | 14253774 | 14253723 | ID=Msa0058020-mRNA-1:cds;Parent=Msa0058020-mRNA-1 |
| chr1_2 | CDS | 14253448 | 14253575 | 14253448 | ID=Msa0058020-mRNA-1:cds;Parent=Msa0058020-mRNA-1 |
| chr1_2 | CDS | 14253287 | 14253335 | 14253287 | ID=Msa0058020-mRNA-1:cds;Parent=Msa0058020-mRNA-1 |
| chr1_2 | CDS | 14252438 | 14252544 | 14252438 | ID=Msa0058020-mRNA-1:cds;Parent=Msa0058020-mRNA-1 |
| chr1_2 | CDS | 14252220 | 14252331 | 14252220 | ID=Msa0058020-mRNA-1:cds;Parent=Msa0058020-mRNA-1 |
| chr1_2 | CDS | 14251314 | 14251548 | 14251314 | ID=Msa0058020-mRNA-1:cds;Parent=Msa0058020-mRNA-1 |
| chr1_2 | CDS | 14251160 | 14251226 | 14251160 | ID=Msa0058020-mRNA-1:cds;Parent=Msa0058020-mRNA-1 |
| chr1_2 | CDS | 14251011 | 14251068 | 14251011 | ID=Msa0058020-mRNA-1:cds;Parent=Msa0058020-mRNA-1 |
| chr1_2 | CDS | 14250807 | 14250886 | 14250807 | ID=Msa0058020-mRNA-1:cds;Parent=Msa0058020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
