Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0033590 | sp|P27456|GSHRP_PEA | 90.054 | 553 | 54 | 1 | 1 | 553 | 1 | 552 | 0.0 | 1025 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002060 | Msa0033590 | 0.801642 | 8.178000e-49 | -8.615850e-47 |
| Msa0005160 | Msa0033590 | 0.807635 | 4.591250e-50 | -8.615850e-47 |
| Msa0005630 | Msa0033590 | 0.816548 | 5.226428e-52 | -8.615850e-47 |
| Msa0006820 | Msa0033590 | 0.809570 | 1.772891e-50 | -8.615850e-47 |
| Msa0016110 | Msa0033590 | 0.806622 | 7.520876e-50 | -8.615850e-47 |
| Msa0017120 | Msa0033590 | 0.805384 | 1.370447e-49 | -8.615850e-47 |
| Msa0017130 | Msa0033590 | 0.822411 | 2.403814e-53 | -8.615850e-47 |
| Msa0021710 | Msa0033590 | 0.826802 | 2.221139e-54 | -8.615850e-47 |
| Msa0033590 | Msa0034320 | 0.825107 | 5.614120e-54 | -8.615850e-47 |
| Msa0033590 | Msa0050570 | 0.902766 | 6.927568e-79 | -8.615850e-47 |
| Msa0033590 | Msa0052550 | 0.821592 | 3.720775e-53 | -8.615850e-47 |
| Msa0033590 | Msa0053210 | 0.815195 | 1.046974e-51 | -8.615850e-47 |
| Msa0033590 | Msa0056040 | 0.815056 | 1.124165e-51 | -8.615850e-47 |
| Msa0033590 | Msa0057740 | 0.833709 | 4.564060e-56 | -8.615850e-47 |
| Msa0033590 | Msa0065390 | 0.841536 | 4.477877e-58 | -8.615850e-47 |
| Msa0033590 | Msa0075830 | 0.809547 | 1.792517e-50 | -8.615850e-47 |
| Msa0033590 | Msa0081300 | 0.812018 | 5.234309e-51 | -8.615850e-47 |
| Msa0033590 | Msa0084800 | 0.840838 | 6.830185e-58 | -8.615850e-47 |
| Msa0033590 | Msa0096570 | 0.818171 | 2.252961e-52 | -8.615850e-47 |
| Msa0033590 | Msa0096830 | 0.803934 | 2.750259e-49 | -8.615850e-47 |
| Msa0033590 | Msa0098700 | 0.803487 | 3.405721e-49 | -8.615850e-47 |
| Msa0033590 | Msa0103060 | 0.822020 | 2.961325e-53 | -8.615850e-47 |
| Msa0033590 | Msa0110710 | 0.839176 | 1.853475e-57 | -8.615850e-47 |
| Msa0033590 | Msa0112340 | 0.811099 | 8.292549e-51 | -8.615850e-47 |
| Msa0033590 | Msa0120180 | 0.802551 | 5.316750e-49 | -8.615850e-47 |
| Msa0033590 | Msa0123910 | 0.836811 | 7.518826e-57 | -8.615850e-47 |
| Msa0033590 | Msa0149070 | 0.800359 | 1.495803e-48 | -8.615850e-47 |
| Msa0033590 | Msa0149630 | 0.836650 | 8.265249e-57 | -8.615850e-47 |
| Msa0033590 | Msa0156260 | 0.812458 | 4.196806e-51 | -8.615850e-47 |
| Msa0033590 | Msa0160470 | 0.821163 | 4.671494e-53 | -8.615850e-47 |
| Msa0033590 | Msa0173610 | 0.816711 | 4.802999e-52 | -8.615850e-47 |
| Msa0033590 | Msa0178940 | 0.802126 | 6.504773e-49 | -8.615850e-47 |
| Msa0033590 | Msa0185390 | 0.817113 | 3.901366e-52 | -8.615850e-47 |
| Msa0033590 | Msa0202630 | 0.829927 | 3.914001e-55 | -8.615850e-47 |
| Msa0033590 | Msa0218860 | 0.800297 | 1.539390e-48 | -8.615850e-47 |
| Msa0033590 | Msa0222070 | 0.822436 | 2.370926e-53 | -8.615850e-47 |
| Msa0033590 | Msa0222120 | 0.818374 | 2.026747e-52 | -8.615850e-47 |
| Msa0033590 | Msa0226800 | 0.800079 | 1.705361e-48 | -8.615850e-47 |
| Msa0033590 | Msa0227290 | 0.807976 | 3.884419e-50 | -8.615850e-47 |
| Msa0033590 | Msa0263430 | 0.801957 | 7.047393e-49 | -8.615850e-47 |
| Msa0033590 | Msa0263620 | 0.817454 | 3.271017e-52 | -8.615850e-47 |
| Msa0033590 | Msa0280140 | 0.811880 | 5.611007e-51 | -8.615850e-47 |
| Msa0033590 | Msa0284260 | 0.828330 | 9.547488e-55 | -8.615850e-47 |
| Msa0033590 | Msa0292150 | 0.801702 | 7.947802e-49 | -8.615850e-47 |
| Msa0033590 | Msa0295240 | 0.811381 | 7.203422e-51 | -8.615850e-47 |
| Msa0033590 | Msa0297860 | 0.807244 | 5.555363e-50 | -8.615850e-47 |
| Msa0033590 | Msa0301460 | 0.820719 | 5.911961e-53 | -8.615850e-47 |
| Msa0033590 | Msa0304870 | 0.840515 | 8.301297e-58 | -8.615850e-47 |
| Msa0033590 | Msa0311910 | 0.800133 | 1.662787e-48 | -8.615850e-47 |
| Msa0033590 | Msa0324060 | 0.801241 | 9.878826e-49 | -8.615850e-47 |
| Msa0033590 | Msa0330370 | 0.832397 | 9.679310e-56 | -8.615850e-47 |
| Msa0033590 | Msa0341260 | 0.838198 | 3.316759e-57 | -8.615850e-47 |
| Msa0033590 | Msa0348760 | 0.819724 | 9.993581e-53 | -8.615850e-47 |
| Msa0033590 | Msa0349000 | 0.803613 | 3.206098e-49 | -8.615850e-47 |
| Msa0033590 | Msa0369430 | 0.835127 | 2.010569e-56 | -8.615850e-47 |
| Msa0033590 | Msa0369780 | 0.834840 | 2.374746e-56 | -8.615850e-47 |
| Msa0033590 | Msa0370500 | -0.804211 | 2.408204e-49 | -8.615850e-47 |
| Msa0033590 | Msa0377460 | 0.831493 | 1.617576e-55 | -8.615850e-47 |
| Msa0033590 | Msa0380360 | 0.805843 | 1.097373e-49 | -8.615850e-47 |
| Msa0033590 | Msa0387790 | 0.802006 | 6.885104e-49 | -8.615850e-47 |
| Msa0033590 | Msa0393540 | 0.815492 | 8.993396e-52 | -8.615850e-47 |
| Msa0033590 | Msa0399180 | 0.829677 | 4.503273e-55 | -8.615850e-47 |
| Msa0033590 | Msa0421800 | 0.843800 | 1.121518e-58 | -8.615850e-47 |
| Msa0033590 | Msa0423110 | 0.851662 | 7.667234e-61 | -8.615850e-47 |
| Msa0033590 | Msa0426860 | 0.838993 | 2.067389e-57 | -8.615850e-47 |
| Msa0033590 | Msa0426890 | 0.822167 | 2.737327e-53 | -8.615850e-47 |
| Msa0033590 | Msa0427050 | 0.819905 | 9.084419e-53 | -8.615850e-47 |
| Msa0033590 | Msa0444340 | 0.803127 | 4.042536e-49 | -8.615850e-47 |
| Msa0033590 | Msa0462120 | 0.817662 | 2.935206e-52 | -8.615850e-47 |
| Msa0033590 | Msa0463540 | 0.853416 | 2.425248e-61 | -8.615850e-47 |
| Msa0033590 | Msa0463990 | 0.840904 | 6.564147e-58 | -8.615850e-47 |
| Msa0033590 | Msa0467080 | 0.802916 | 4.470033e-49 | -8.615850e-47 |
| Msa0033590 | Msa0467800 | 0.831171 | 1.942059e-55 | -8.615850e-47 |
| Msa0033590 | Msa0467880 | 0.831745 | 1.402425e-55 | -8.615850e-47 |
| Msa0033590 | Msa0473320 | 0.806372 | 8.492224e-50 | -8.615850e-47 |
| Msa0033590 | Msa0473450 | 0.818059 | 2.388382e-52 | -8.615850e-47 |
| Msa0033590 | Msa0488830 | 0.812812 | 3.511889e-51 | -8.615850e-47 |
| Msa0033590 | Msa0504740 | 0.822669 | 2.092709e-53 | -8.615850e-47 |
| Msa0033590 | Msa0509540 | 0.836859 | 7.310348e-57 | -8.615850e-47 |
| Msa0033590 | Msa0514260 | 0.847098 | 1.433384e-59 | -8.615850e-47 |
| Msa0033590 | Msa0514990 | 0.802177 | 6.348765e-49 | -8.615850e-47 |
| Msa0033590 | Msa0517400 | 0.827905 | 1.208165e-54 | -8.615850e-47 |
| Msa0033590 | Msa0534420 | 0.815657 | 8.263346e-52 | -8.615850e-47 |
| Msa0033590 | Msa0558890 | 0.802799 | 4.725750e-49 | -8.615850e-47 |
| Msa0033590 | Msa0560200 | 0.813745 | 2.190638e-51 | -8.615850e-47 |
| Msa0033590 | Msa0600390 | 0.800733 | 1.254759e-48 | -8.615850e-47 |
| Msa0033590 | Msa0622390 | 0.801375 | 9.276676e-49 | -8.615850e-47 |
| Msa0033590 | Msa0624220 | 0.811706 | 6.121485e-51 | -8.615850e-47 |
| Msa0033590 | Msa0624240 | 0.822972 | 1.779027e-53 | -8.615850e-47 |
| Msa0033590 | Msa0635990 | 0.818971 | 1.483641e-52 | -8.615850e-47 |
| Msa0033590 | Msa0638040 | 0.825803 | 3.841022e-54 | -8.615850e-47 |
| Msa0033590 | Msa0640880 | 0.804976 | 1.667975e-49 | -8.615850e-47 |
| Msa0033590 | Msa0647460 | 0.810622 | 1.051811e-50 | -8.615850e-47 |
| Msa0033590 | Msa0648630 | 0.813167 | 2.935355e-51 | -8.615850e-47 |
| Msa0033590 | Msa0659070 | 0.821662 | 3.583698e-53 | -8.615850e-47 |
| Msa0033590 | Msa0685520 | 0.839802 | 1.274129e-57 | -8.615850e-47 |
| Msa0033590 | Msa0690720 | 0.818182 | 2.239467e-52 | -8.615850e-47 |
| Msa0033590 | Msa0691100 | 0.841662 | 4.146985e-58 | -8.615850e-47 |
| Msa0033590 | Msa0698900 | 0.806296 | 8.814801e-50 | -8.615850e-47 |
| Msa0033590 | Msa0704570 | 0.809445 | 1.885996e-50 | -8.615850e-47 |
| Msa0033590 | Msa0704990 | 0.828047 | 1.116668e-54 | -8.615850e-47 |
| Msa0033590 | Msa0705030 | 0.838310 | 3.102002e-57 | -8.615850e-47 |
| Msa0033590 | Msa0705050 | 0.801875 | 7.325304e-49 | -8.615850e-47 |
| Msa0033590 | Msa0705250 | 0.819096 | 1.389581e-52 | -8.615850e-47 |
| Msa0033590 | Msa0713550 | 0.811295 | 7.518967e-51 | -8.615850e-47 |
| Msa0033590 | Msa0715180 | 0.800386 | 1.476683e-48 | -8.615850e-47 |
| Msa0033590 | Msa0716670 | 0.803981 | 2.689629e-49 | -8.615850e-47 |
| Msa0033590 | Msa0729590 | 0.815594 | 8.533778e-52 | -8.615850e-47 |
| Msa0033590 | Msa0750940 | 0.807890 | 4.052158e-50 | -8.615850e-47 |
| Msa0033590 | Msa0755570 | 0.813521 | 2.454217e-51 | -8.615850e-47 |
| Msa0033590 | Msa0758820 | 0.807423 | 5.092425e-50 | -8.615850e-47 |
| Msa0033590 | Msa0763910 | 0.809801 | 1.581448e-50 | -8.615850e-47 |
| Msa0033590 | Msa0766880 | 0.829006 | 6.551175e-55 | -8.615850e-47 |
| Msa0033590 | Msa0780750 | 0.820107 | 8.169363e-53 | -8.615850e-47 |
| Msa0033590 | Msa0789800 | 0.808933 | 2.427842e-50 | -8.615850e-47 |
| Msa0033590 | Msa0794130 | 0.822274 | 2.585534e-53 | -8.615850e-47 |
| Msa0033590 | Msa0804930 | 0.810721 | 1.001506e-50 | -8.615850e-47 |
| Msa0033590 | Msa0825960 | 0.802588 | 5.225349e-49 | -8.615850e-47 |
| Msa0033590 | Msa0835030 | 0.810027 | 1.413390e-50 | -8.615850e-47 |
| Msa0033590 | Msa0844100 | 0.824477 | 7.902598e-54 | -8.615850e-47 |
| Msa0033590 | Msa0893390 | 0.802432 | 5.627357e-49 | -8.615850e-47 |
| Msa0033590 | Msa0910650 | 0.815077 | 1.111775e-51 | -8.615850e-47 |
| Msa0033590 | Msa0913120 | 0.806642 | 7.450957e-50 | -8.615850e-47 |
| Msa0033590 | Msa0930160 | 0.834487 | 2.913145e-56 | -8.615850e-47 |
| Msa0033590 | Msa0940550 | 0.800919 | 1.149812e-48 | -8.615850e-47 |
| Msa0033590 | Msa0971860 | 0.810257 | 1.261421e-50 | -8.615850e-47 |
| Msa0033590 | Msa0977090 | 0.805505 | 1.292648e-49 | -8.615850e-47 |
| Msa0033590 | Msa1001780 | 0.829276 | 5.635403e-55 | -8.615850e-47 |
| Msa0033590 | Msa1002980 | 0.817840 | 2.676789e-52 | -8.615850e-47 |
| Msa0033590 | Msa1007980 | 0.803317 | 3.693276e-49 | -8.615850e-47 |
| Msa0033590 | Msa1013510 | 0.804410 | 2.189265e-49 | -8.615850e-47 |
| Msa0033590 | Msa1024580 | 0.808576 | 2.893411e-50 | -8.615850e-47 |
| Msa0033590 | Msa1030430 | 0.854809 | 9.614095e-62 | -8.615850e-47 |
| Msa0033590 | Msa1049440 | 0.835933 | 1.257585e-56 | -8.615850e-47 |
| Msa0033590 | Msa1067430 | 0.802381 | 5.763500e-49 | -8.615850e-47 |
| Msa0033590 | Msa1102180 | 0.837601 | 4.719724e-57 | -8.615850e-47 |
| Msa0033590 | Msa1119720 | 0.802006 | 6.884322e-49 | -8.615850e-47 |
| Msa0033590 | Msa1123340 | 0.833798 | 4.335930e-56 | -8.615850e-47 |
| Msa0033590 | Msa1127900 | 0.832794 | 7.711359e-56 | -8.615850e-47 |
| Msa0033590 | Msa1130660 | 0.810051 | 1.396715e-50 | -8.615850e-47 |
| Msa0033590 | Msa1144420 | 0.803619 | 3.196908e-49 | -8.615850e-47 |
| Msa0033590 | Msa1165810 | 0.828777 | 7.445398e-55 | -8.615850e-47 |
| Msa0033590 | Msa1166180 | 0.823394 | 1.418361e-53 | -8.615850e-47 |
| Msa0033590 | Msa1166280 | 0.822563 | 2.215925e-53 | -8.615850e-47 |
| Msa0033590 | Msa1173410 | 0.824485 | 7.870304e-54 | -8.615850e-47 |
| Msa0033590 | Msa1178970 | 0.812595 | 3.917269e-51 | -8.615850e-47 |
| Msa0033590 | Msa1187810 | 0.831145 | 1.970030e-55 | -8.615850e-47 |
| Msa0033590 | Msa1189630 | 0.810272 | 1.251460e-50 | -8.615850e-47 |
| Msa0033590 | Msa1198450 | 0.801966 | 7.017720e-49 | -8.615850e-47 |
| Msa0033590 | Msa1202730 | 0.817599 | 3.033774e-52 | -8.615850e-47 |
| Msa0033590 | Msa1208750 | 0.801624 | 8.246425e-49 | -8.615850e-47 |
| Msa0033590 | Msa1213540 | 0.802433 | 5.624036e-49 | -8.615850e-47 |
| Msa0033590 | Msa1215210 | 0.800955 | 1.130226e-48 | -8.615850e-47 |
| Msa0033590 | Msa1219250 | 0.810082 | 1.375567e-50 | -8.615850e-47 |
| Msa0033590 | Msa1220740 | 0.845077 | 5.085004e-59 | -8.615850e-47 |
| Msa0033590 | Msa1242010 | 0.803757 | 2.992926e-49 | -8.615850e-47 |
| Msa0033590 | Msa1263590 | 0.801717 | 7.891007e-49 | -8.615850e-47 |
| Msa0033590 | Msa1263670 | 0.800921 | 1.148914e-48 | -8.615850e-47 |
| Msa0033590 | Msa1283120 | 0.821015 | 5.054031e-53 | -8.615850e-47 |
| Msa0033590 | Msa1293530 | 0.818461 | 1.937141e-52 | -8.615850e-47 |
| Msa0033590 | Msa1300880 | 0.808244 | 3.406539e-50 | -8.615850e-47 |
| Msa0033590 | Msa1309100 | 0.800467 | 1.422064e-48 | -8.615850e-47 |
| Msa0033590 | Msa1310300 | 0.851879 | 6.656129e-61 | -8.615850e-47 |
| Msa0033590 | Msa1322420 | 0.819818 | 9.513615e-53 | -8.615850e-47 |
| Msa0033590 | Msa1327040 | 0.802287 | 6.027933e-49 | -8.615850e-47 |
| Msa0033590 | Msa1334650 | 0.846926 | 1.597862e-59 | -8.615850e-47 |
| Msa0033590 | Msa1349360 | 0.806769 | 7.004849e-50 | -8.615850e-47 |
| Msa0033590 | Msa1353040 | 0.812094 | 5.039486e-51 | -8.615850e-47 |
| Msa0033590 | Msa1356200 | 0.803836 | 2.882637e-49 | -8.615850e-47 |
| Msa0033590 | Msa1364520 | 0.821711 | 3.491194e-53 | -8.615850e-47 |
| Msa0033590 | Msa1365210 | 0.807272 | 5.480431e-50 | -8.615850e-47 |
| Msa0033590 | Msa1372560 | 0.815738 | 7.926600e-52 | -8.615850e-47 |
| Msa0033590 | Msa1376590 | 0.801054 | 1.079167e-48 | -8.615850e-47 |
| Msa0033590 | Msa1381130 | 0.820834 | 5.561914e-53 | -8.615850e-47 |
| Msa0033590 | Msa1385940 | 0.811803 | 5.831321e-51 | -8.615850e-47 |
| Msa0033590 | Msa1388850 | 0.808240 | 3.412508e-50 | -8.615850e-47 |
| Msa0033590 | Msa1391430 | 0.813949 | 1.975119e-51 | -8.615850e-47 |
| Msa0033590 | Msa1398740 | 0.839830 | 1.252947e-57 | -8.615850e-47 |
| Msa0033590 | Msa1406230 | 0.835512 | 1.607291e-56 | -8.615850e-47 |
| Msa0033590 | Msa1410170 | 0.825273 | 5.128395e-54 | -8.615850e-47 |
| Msa0033590 | Msa1413220 | 0.814249 | 1.696166e-51 | -8.615850e-47 |
| Msa0033590 | Msa1415250 | 0.801938 | 7.110325e-49 | -8.615850e-47 |
| Msa0033590 | Msa1416460 | 0.834094 | 3.655356e-56 | -8.615850e-47 |
| Msa0033590 | Msa1418600 | 0.812738 | 3.645754e-51 | -8.615850e-47 |
| Msa0033590 | Msa1423190 | 0.806949 | 6.414796e-50 | -8.615850e-47 |
| Msa0033590 | Msa1426870 | 0.823002 | 1.750832e-53 | -8.615850e-47 |
| Msa0033590 | Msa1431180 | 0.812299 | 4.545656e-51 | -8.615850e-47 |
| Msa0033590 | Msa1435470 | 0.822758 | 1.995905e-53 | -8.615850e-47 |
| Msa0033590 | Msa1439800 | 0.809070 | 2.268974e-50 | -8.615850e-47 |
| Msa0033590 | Msa1449600 | 0.820250 | 7.573564e-53 | -8.615850e-47 |
| Msa0033590 | Msa1449680 | 0.823689 | 1.210160e-53 | -8.615850e-47 |
| Msa0033590 | Msa1456830 | 0.807173 | 5.751435e-50 | -8.615850e-47 |
| Msa0033590 | Msa1458330 | 0.802836 | 4.644191e-49 | -8.615850e-47 |
| Msa0033590 | Msa1458920 | 0.831097 | 2.025005e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0033590 | MtrunA17_Chr1g0184771 | 97.468 | 553 | 14 | 0 | 1 | 553 | 1 | 553 | 0.0 | 1106 |
| Msa0033590 | MtrunA17_Chr6g0462411 | 53.878 | 477 | 213 | 5 | 66 | 536 | 16 | 491 | 5.30e-180 | 516 |
| Msa0033590 | MtrunA17_Chr4g0068201 | 32.669 | 502 | 295 | 15 | 48 | 521 | 54 | 540 | 2.69e-49 | 179 |
| Msa0033590 | MtrunA17_Chr2g0294661 | 31.707 | 492 | 292 | 15 | 58 | 521 | 68 | 543 | 8.24e-49 | 177 |
| Msa0033590 | MtrunA17_Chr4g0068951 | 28.176 | 433 | 291 | 9 | 104 | 521 | 59 | 486 | 1.28e-45 | 167 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0033590 | AT3G54660.1 | 82.129 | 498 | 88 | 1 | 55 | 552 | 68 | 564 | 0.0 | 871 |
| Msa0033590 | AT3G24170.1 | 53.404 | 470 | 212 | 4 | 70 | 533 | 21 | 489 | 2.22e-176 | 507 |
| Msa0033590 | AT3G24170.2 | 53.404 | 470 | 212 | 4 | 70 | 533 | 21 | 489 | 2.22e-176 | 507 |
| Msa0033590 | AT3G24170.3 | 53.404 | 470 | 212 | 4 | 70 | 533 | 21 | 489 | 2.22e-176 | 507 |
| Msa0033590 | AT3G16950.1 | 32.206 | 562 | 319 | 20 | 3 | 521 | 2 | 544 | 1.72e-50 | 182 |
| Msa0033590 | AT3G16950.2 | 32.206 | 562 | 319 | 20 | 3 | 521 | 2 | 544 | 4.63e-50 | 182 |
| Msa0033590 | AT4G16155.1 | 31.532 | 555 | 320 | 18 | 3 | 521 | 11 | 541 | 1.76e-48 | 177 |
| Msa0033590 | AT1G48030.2 | 26.559 | 433 | 298 | 8 | 104 | 521 | 64 | 491 | 4.00e-42 | 158 |
| Msa0033590 | AT1G48030.5 | 26.559 | 433 | 298 | 8 | 104 | 521 | 64 | 491 | 4.00e-42 | 158 |
| Msa0033590 | AT1G48030.3 | 26.559 | 433 | 298 | 8 | 104 | 521 | 64 | 491 | 4.00e-42 | 158 |
| Msa0033590 | AT1G48030.1 | 26.559 | 433 | 298 | 8 | 104 | 521 | 64 | 491 | 4.00e-42 | 158 |
| Msa0033590 | AT1G48030.4 | 26.559 | 433 | 298 | 8 | 104 | 521 | 64 | 491 | 4.00e-42 | 158 |
| Msa0033590 | AT3G17240.1 | 28.082 | 438 | 287 | 10 | 103 | 521 | 63 | 491 | 3.68e-41 | 155 |
| Msa0033590 | AT3G17240.3 | 28.082 | 438 | 287 | 10 | 103 | 521 | 63 | 491 | 3.68e-41 | 155 |
Find 180 sgRNAs with CRISPR-Local
Find 466 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACGCTTTGCTTCCAATTT+TGG | 0.092567 | 1_1:+61145319 | Msa0033590:CDS |
| CCACTGAAGGCCACCCTCTC+TGG | 0.136948 | 1_1:+61149715 | Msa0033590:CDS |
| GAGTTTGCTGGTATCTTTAA+TGG | 0.157959 | 1_1:+61147535 | Msa0033590:CDS |
| AAACATCGGTTCCTTCAATT+TGG | 0.171733 | 1_1:+61148661 | Msa0033590:CDS |
| GGTGAAGAAGAGAGTGTTTC+GGG | 0.199422 | 1_1:-61145110 | None:intergenic |
| ACAATTTCACTGCAGAATTT+AGG | 0.226558 | 1_1:+61148494 | Msa0033590:intron |
| AAACTTCATACCTTAGTATT+AGG | 0.232538 | 1_1:-61147874 | None:intergenic |
| GCCATTGCTGCTTGCTTCAT+TGG | 0.244519 | 1_1:-61145049 | None:intergenic |
| TAATTTATCCTGCACAAAAT+AGG | 0.258352 | 1_1:+61151971 | Msa0033590:three_prime_UTR |
| AGAGTGAAGGAGCGAGAAAA+TGG | 0.259312 | 1_1:-61145142 | None:intergenic |
| GCTGAGTTGCAGAGGCTTAC+TGG | 0.274604 | 1_1:+61147154 | Msa0033590:CDS |
| GAATAATACAAATTGGTCTT+TGG | 0.276446 | 1_1:-61144944 | None:intergenic |
| TTTGAAGAAAGCAATGGTTT+TGG | 0.285225 | 1_1:+61147073 | Msa0033590:CDS |
| TCTCACTCCAGTTGCTTTGA+TGG | 0.293228 | 1_1:+61148713 | Msa0033590:CDS |
| TACATTGCCTTGGAGTTTGC+TGG | 0.310725 | 1_1:+61147523 | Msa0033590:CDS |
| AGCAGCGTTAGCACCAAAAT+TGG | 0.316676 | 1_1:-61145332 | None:intergenic |
| TCTATTGCATATTCCTTTCC+AGG | 0.317991 | 1_1:-61147439 | None:intergenic |
| GGATTGAGAGATTAGGGTTT+TGG | 0.321278 | 1_1:-61145182 | None:intergenic |
| CCCTTCATTCCTGATATTCC+TGG | 0.322317 | 1_1:+61147421 | Msa0033590:CDS |
| CCCTCTCTGGGCTTCCAGAC+CGG | 0.323993 | 1_1:+61149728 | Msa0033590:CDS |
| GAGAGTGTTTCGGGTAAGTA+AGG | 0.332461 | 1_1:-61145101 | None:intergenic |
| GCTCGCACGCACGCTACATT+TGG | 0.334156 | 1_1:-61144904 | None:intergenic |
| TATTCCTTTCCAGGAATATC+AGG | 0.334157 | 1_1:-61147430 | None:intergenic |
| AGCGAAGGTGCGGCGGGGAG+GGG | 0.337776 | 1_1:-61145203 | None:intergenic |
| GCGAGAAAATGGGAAGGTTT+TGG | 0.339049 | 1_1:-61145131 | None:intergenic |
| AACATCGGTTCCTTCAATTT+GGG | 0.350449 | 1_1:+61148662 | Msa0033590:CDS |
| AGCCAACAAAACCTGATTAT+AGG | 0.353075 | 1_1:+61148772 | Msa0033590:CDS |
| CCTCTCTGGGCTTCCAGACC+GGG | 0.370019 | 1_1:+61149729 | Msa0033590:CDS |
| GGGAGGGGATTGAGAGATTA+GGG | 0.370258 | 1_1:-61145188 | None:intergenic |
| CCAACAATGGCAATCTTCTC+AGG | 0.371658 | 1_1:-61147493 | None:intergenic |
| CACTGAAGGCCACCCTCTCT+GGG | 0.374084 | 1_1:+61149716 | Msa0033590:CDS |
| AATGTATATTACCTATAATC+AGG | 0.374502 | 1_1:-61148783 | None:intergenic |
| AACTCCTCCAATTGGTGGTT+GGG | 0.383902 | 1_1:-61149521 | None:intergenic |
| CTTATTTAATTTGAAGCAGT+TGG | 0.384914 | 1_1:+61151868 | Msa0033590:three_prime_UTR |
| ACAGCGAAGGTGCGGCGGGG+AGG | 0.385464 | 1_1:-61145205 | None:intergenic |
| AAGGCATCGGCAAGTTTCTC+TGG | 0.389438 | 1_1:-61150623 | None:intergenic |
| ATGAGTTGAATAATACAAAT+TGG | 0.398261 | 1_1:-61144951 | None:intergenic |
| GCATAGACGAGTAATTTCTT+TGG | 0.399267 | 1_1:-61147031 | None:intergenic |
| ACCATCCACGGTACCTTTGC+TGG | 0.403218 | 1_1:-61147818 | None:intergenic |
| CTACAGGAGATTCCTCAGTA+TGG | 0.404625 | 1_1:-61147756 | None:intergenic |
| TGTCTTGAAAGCTCAGTTGC+CGG | 0.405143 | 1_1:-61151684 | None:intergenic |
| AACTGAAACTAAAATGTGTT+TGG | 0.416281 | 1_1:-61147389 | None:intergenic |
| CAGCGAAGGTGCGGCGGGGA+GGG | 0.417528 | 1_1:-61145204 | None:intergenic |
| GAGTGAAGGAGCGAGAAAAT+GGG | 0.424845 | 1_1:-61145141 | None:intergenic |
| TGGTGAAGAAGAGAGTGTTT+CGG | 0.426258 | 1_1:-61145111 | None:intergenic |
| CCTCACACAGTTGATGTTGA+TGG | 0.426893 | 1_1:+61147352 | Msa0033590:CDS |
| TTCTGGGTTTGCACATGTGT+GGG | 0.429264 | 1_1:+61149791 | Msa0033590:CDS |
| TCTAATGTCAAGTTGATTGA+AGG | 0.429954 | 1_1:+61147202 | Msa0033590:CDS |
| CGGGGTGAGCTCATTTGAAA+AGG | 0.431398 | 1_1:+61151720 | Msa0033590:three_prime_UTR |
| ACTCCCTCCATCAAAGCAAC+TGG | 0.439081 | 1_1:-61148720 | None:intergenic |
| GTTCCTTCAATTTGGGCAAT+CGG | 0.441096 | 1_1:+61148669 | Msa0033590:CDS |
| TTCACCATCGGCGCTGGTAG+TGG | 0.444324 | 1_1:+61145283 | Msa0033590:CDS |
| TTTGCAGTTGCTATTAAAGC+TGG | 0.444400 | 1_1:+61149927 | Msa0033590:CDS |
| GCACAGGCTGTAGAACAATA+TGG | 0.445183 | 1_1:+61149661 | Msa0033590:intron |
| CTTGATTTACCTGTGAATCA+AGG | 0.448766 | 1_1:-61150049 | None:intergenic |
| TCTCATATTATGTTTGCTAC+AGG | 0.452576 | 1_1:+61147844 | Msa0033590:CDS |
| AGAAACTTGCCGATGCCTTA+AGG | 0.453029 | 1_1:+61150627 | Msa0033590:three_prime_UTR |
| ACAGTGAACCTAAGCATGAT+TGG | 0.455004 | 1_1:+61147107 | Msa0033590:CDS |
| TGTATTTATACGACAAAAGC+AGG | 0.455244 | 1_1:+61147576 | Msa0033590:CDS |
| CCTGAGAAGATTGCCATTGT+TGG | 0.456099 | 1_1:+61147493 | Msa0033590:CDS |
| TCGAAAGAGCCTTGATTCAC+AGG | 0.456430 | 1_1:+61150040 | Msa0033590:CDS |
| CGCGGACAGCGAAGGTGCGG+CGG | 0.457016 | 1_1:-61145210 | None:intergenic |
| GGGGAGGGGATTGAGAGATT+AGG | 0.458540 | 1_1:-61145189 | None:intergenic |
| TTACGTGCCGCCGACACCTC+CGG | 0.460902 | 1_1:-61145395 | None:intergenic |
| AGGACGCAAACCTAATACTA+AGG | 0.462907 | 1_1:+61147864 | Msa0033590:CDS |
| GCGGACAGCGAAGGTGCGGC+GGG | 0.464036 | 1_1:-61145209 | None:intergenic |
| AATACAAATTGGTCTTTGGC+TGG | 0.465278 | 1_1:-61144940 | None:intergenic |
| TCTCCGATTGCCCAAATTGA+AGG | 0.476874 | 1_1:-61148672 | None:intergenic |
| ACTCCAGTTGCTTTGATGGA+GGG | 0.482584 | 1_1:+61148717 | Msa0033590:CDS |
| AGTTGGTCTCACAGAGGAGC+AGG | 0.483401 | 1_1:+61149540 | Msa0033590:CDS |
| TCCAGGAATATCAGGAATGA+AGG | 0.485140 | 1_1:-61147422 | None:intergenic |
| GTGAGACCAACTCCTCCAAT+TGG | 0.485622 | 1_1:-61149529 | None:intergenic |
| AAACTACTCCAATCATGCTT+AGG | 0.489785 | 1_1:-61147115 | None:intergenic |
| ACAAACTCCTCAGCTGCGGT+TGG | 0.490186 | 1_1:-61149990 | None:intergenic |
| AGTTGCTTTGATGGAGGGAG+TGG | 0.491872 | 1_1:+61148722 | Msa0033590:CDS |
| TCGAAGTCATAGTGGATGGC+GGG | 0.494927 | 1_1:-61145256 | None:intergenic |
| CAATCGGAGATGCTACAAAC+AGG | 0.496018 | 1_1:+61148685 | Msa0033590:CDS |
| TTCCTCTGAATATGTACAAA+GGG | 0.496817 | 1_1:-61151806 | None:intergenic |
| CAAACTCCTCAGCTGCGGTT+GGG | 0.497195 | 1_1:-61149989 | None:intergenic |
| CAACCACCAATTGGAGGAGT+TGG | 0.497734 | 1_1:+61149523 | Msa0033590:CDS |
| GGGGTGAGCTCATTTGAAAA+GGG | 0.498588 | 1_1:+61151721 | Msa0033590:three_prime_UTR |
| GTGTTCTCCCAACCACCAAT+TGG | 0.499772 | 1_1:+61149514 | Msa0033590:CDS |
| GACGTGTTAAATAAGCACTT+TGG | 0.506061 | 1_1:+61144998 | Msa0033590:five_prime_UTR |
| AAAGCAATATTGTTAAGTTC+CGG | 0.508995 | 1_1:-61150585 | None:intergenic |
| TTCACTGCAGAATTTAGGAC+TGG | 0.509056 | 1_1:+61148499 | Msa0033590:intron |
| GGTTGGGAGAACACAGCAGC+AGG | 0.513851 | 1_1:-61149505 | None:intergenic |
| CTTCCTAGTGGGAGTCCTCA+TGG | 0.514013 | 1_1:-61150015 | None:intergenic |
| TCATCCTTACCTTAAGGCAT+CGG | 0.514863 | 1_1:-61150636 | None:intergenic |
| GAGAGAAGGTGTGAGAGTGA+AGG | 0.516201 | 1_1:-61145155 | None:intergenic |
| CACGAATTTGAAGAAAGCAA+TGG | 0.518983 | 1_1:+61147067 | Msa0033590:CDS |
| CAACTCCTCCAATTGGTGGT+TGG | 0.519267 | 1_1:-61149522 | None:intergenic |
| CATTCCTGATATTCCTGGAA+AGG | 0.522049 | 1_1:+61147426 | Msa0033590:CDS |
| CACTCCAGTTGCTTTGATGG+AGG | 0.522427 | 1_1:+61148716 | Msa0033590:CDS |
| CGATTCAGCGCGGACAGCGA+AGG | 0.522983 | 1_1:-61145218 | None:intergenic |
| TAAGGGAGAAGAACAAGAGA+GGG | 0.523490 | 1_1:-61145083 | None:intergenic |
| GACCTCTTCACCATCGGCGC+TGG | 0.525583 | 1_1:+61145277 | Msa0033590:CDS |
| AAGACAATACATGAAATAGC+GGG | 0.527633 | 1_1:+61151701 | Msa0033590:three_prime_UTR |
| GTTCTGGGTTTGCACATGTG+TGG | 0.535374 | 1_1:+61149790 | Msa0033590:CDS |
| GGTGGTATCCGATGAGATAG+TGG | 0.536762 | 1_1:-61145374 | None:intergenic |
| TATCCTGCACAAAATAGGAT+GGG | 0.538621 | 1_1:+61151976 | Msa0033590:three_prime_UTR |
| AGAAGATTGCCATTGTTGGT+GGG | 0.539271 | 1_1:+61147497 | Msa0033590:CDS |
| ACCAATGAAGCAAGCAGCAA+TGG | 0.540077 | 1_1:+61145048 | Msa0033590:exon |
| AGAGTGTTTCGGGTAAGTAA+GGG | 0.540382 | 1_1:-61145100 | None:intergenic |
| CCAGAGAGGGTGGCCTTCAG+TGG | 0.541109 | 1_1:-61149715 | None:intergenic |
| TGATGCTCCTGAAATTGTGC+AGG | 0.541563 | 1_1:+61149816 | Msa0033590:CDS |
| GCTGCCTTAGTGATAGCTAC+AGG | 0.541775 | 1_1:-61147772 | None:intergenic |
| GAGAAGATTGCCATTGTTGG+TGG | 0.542063 | 1_1:+61147496 | Msa0033590:CDS |
| TGCTAAAGATGGATCAATAG+AGG | 0.542879 | 1_1:+61148541 | Msa0033590:CDS |
| AATTTAGGACTGGAGTCTGT+TGG | 0.543197 | 1_1:+61148509 | Msa0033590:CDS |
| GAAGATTGCCATTGTTGGTG+GGG | 0.543504 | 1_1:+61147498 | Msa0033590:CDS |
| GTCAAGTTGATTGAAGGCCG+TGG | 0.546121 | 1_1:+61147208 | Msa0033590:CDS |
| GTCTGGAAGCCCAGAGAGGG+TGG | 0.547984 | 1_1:-61149725 | None:intergenic |
| CTCACACAGTTGATGTTGAT+GGG | 0.555032 | 1_1:+61147353 | Msa0033590:CDS |
| CTCTTTCGAATCTTCCTAGT+GGG | 0.556074 | 1_1:-61150026 | None:intergenic |
| GTAAGGGAGAAGAACAAGAG+AGG | 0.557001 | 1_1:-61145084 | None:intergenic |
| TCGGATACCACCGGAGGTGT+CGG | 0.560790 | 1_1:+61145385 | Msa0033590:CDS |
| TTATCCTGCACAAAATAGGA+TGG | 0.562058 | 1_1:+61151975 | Msa0033590:three_prime_UTR |
| CTCTCTTTAAAGACCAGCAA+AGG | 0.565512 | 1_1:+61147805 | Msa0033590:CDS |
| ACCGCCACTACCAGCGCCGA+TGG | 0.569356 | 1_1:-61145287 | None:intergenic |
| ACCAGCAAAGGTACCGTGGA+TGG | 0.570642 | 1_1:+61147817 | Msa0033590:CDS |
| GTTGATTGAAGGCCGTGGAA+AGG | 0.572186 | 1_1:+61147213 | Msa0033590:CDS |
| AAGATTGCCATTGTTGGTGG+GGG | 0.574113 | 1_1:+61147499 | Msa0033590:CDS |
| TCCGTTCTCCACTATCTCAT+CGG | 0.574933 | 1_1:+61145366 | Msa0033590:CDS |
| GGTGTGAAGATTGCTAAAGA+TGG | 0.580574 | 1_1:+61148530 | Msa0033590:CDS |
| GTCCGCGCTGAATCGCAAAA+CGG | 0.581424 | 1_1:+61145226 | Msa0033590:CDS |
| GCAGAAAATATGGCTCTAAG+AGG | 0.582671 | 1_1:+61147724 | Msa0033590:CDS |
| ATCCCTTTGTACATATTCAG+AGG | 0.583715 | 1_1:+61151804 | Msa0033590:three_prime_UTR |
| ACCATCGGCGCTGGTAGTGG+CGG | 0.583741 | 1_1:+61145286 | Msa0033590:CDS |
| TGAATATGTACAAAGGGATG+AGG | 0.585149 | 1_1:-61151800 | None:intergenic |
| GACTTCGACCTCTTCACCAT+CGG | 0.585336 | 1_1:+61145271 | Msa0033590:CDS |
| CAGCGCGGACAGCGAAGGTG+CGG | 0.586569 | 1_1:-61145213 | None:intergenic |
| CCGGTCTGGAAGCCCAGAGA+GGG | 0.587282 | 1_1:-61149728 | None:intergenic |
| TACCAGCGCCGATGGTGAAG+AGG | 0.587460 | 1_1:-61145279 | None:intergenic |
| TGAAGAGGTCGAAGTCATAG+TGG | 0.590713 | 1_1:-61145264 | None:intergenic |
| AATGAAGCAAAAGCTGTAGC+CGG | 0.591095 | 1_1:+61150566 | Msa0033590:CDS |
| CATTCACCCAACCGCAGCTG+AGG | 0.593036 | 1_1:+61149983 | Msa0033590:CDS |
| TTTCCTCTGAATATGTACAA+AGG | 0.595056 | 1_1:-61151807 | None:intergenic |
| TTCTCCCAACCACCAATTGG+AGG | 0.598183 | 1_1:+61149517 | Msa0033590:CDS |
| ATCTCCTGTAGCTATCACTA+AGG | 0.598330 | 1_1:+61147768 | Msa0033590:CDS |
| GCAGACTTTGATGCTACTGT+AGG | 0.605910 | 1_1:+61149960 | Msa0033590:CDS |
| GAAGGAGCGAGAAAATGGGA+AGG | 0.606162 | 1_1:-61145137 | None:intergenic |
| ACTATCTCATCGGATACCAC+CGG | 0.607136 | 1_1:+61145376 | Msa0033590:CDS |
| GAGGTCGAAGTCATAGTGGA+TGG | 0.611488 | 1_1:-61145260 | None:intergenic |
| TCACCATGAGGACTCCCACT+AGG | 0.611633 | 1_1:+61150012 | Msa0033590:CDS |
| TCTGGGTTTGCACATGTGTG+GGG | 0.615085 | 1_1:+61149792 | Msa0033590:CDS |
| CAAGACAATACATGAAATAG+CGG | 0.617151 | 1_1:+61151700 | Msa0033590:three_prime_UTR |
| TTTGCGAGGATTTGATGAAG+AGG | 0.617316 | 1_1:+61147600 | Msa0033590:CDS |
| AGAATCATCCCACCTTTCCA+CGG | 0.618295 | 1_1:-61147225 | None:intergenic |
| AAAGATACCAGCAAACTCCA+AGG | 0.619374 | 1_1:-61147530 | None:intergenic |
| ATCCTGCACAAAATAGGATG+GGG | 0.619402 | 1_1:+61151977 | Msa0033590:three_prime_UTR |
| TATTAAAGCTGGATTGACAA+AGG | 0.619694 | 1_1:+61149938 | Msa0033590:CDS |
| CCAGGAATATCAGGAATGAA+GGG | 0.621948 | 1_1:-61147421 | None:intergenic |
| TCCGATGAGATAGTGGAGAA+CGG | 0.624800 | 1_1:-61145367 | None:intergenic |
| CGAAGTCATAGTGGATGGCG+GGG | 0.627610 | 1_1:-61145255 | None:intergenic |
| CCATCAACATCAACTGTGTG+AGG | 0.629501 | 1_1:-61147352 | None:intergenic |
| GTCGAAGTCATAGTGGATGG+CGG | 0.633614 | 1_1:-61145257 | None:intergenic |
| TGATGAATACTCTCAAACAT+CGG | 0.635283 | 1_1:+61148647 | Msa0033590:CDS |
| TGGAAGCAAAGCGTGAAGCA+CGG | 0.635699 | 1_1:-61145312 | None:intergenic |
| GCTATCACTAAGGCAGCTGA+TGG | 0.636893 | 1_1:+61147778 | Msa0033590:CDS |
| GTTGGAGTTGAGACACAGCA+TGG | 0.639703 | 1_1:+61151886 | Msa0033590:three_prime_UTR |
| TATTCAGAGGAAATCTCATG+AGG | 0.640406 | 1_1:+61151817 | Msa0033590:three_prime_UTR |
| AGACCAACTCCTCCAATTGG+TGG | 0.641871 | 1_1:-61149526 | None:intergenic |
| CGGACAGCGAAGGTGCGGCG+GGG | 0.644049 | 1_1:-61145208 | None:intergenic |
| GGTGAGCTCATTTGAAAAGG+GGG | 0.644922 | 1_1:+61151723 | Msa0033590:three_prime_UTR |
| GATACCACCGGAGGTGTCGG+CGG | 0.653808 | 1_1:+61145388 | Msa0033590:CDS |
| GGGTGAGCTCATTTGAAAAG+GGG | 0.662931 | 1_1:+61151722 | Msa0033590:three_prime_UTR |
| GTGAGCTCATTTGAAAAGGG+GGG | 0.663151 | 1_1:+61151724 | Msa0033590:three_prime_UTR |
| GGTGACAAACTCCTCAGCTG+CGG | 0.664472 | 1_1:-61149994 | None:intergenic |
| GCTCTTTCGAATCTTCCTAG+TGG | 0.665678 | 1_1:-61150027 | None:intergenic |
| ATTCAGAGGAAATCTCATGA+GGG | 0.669097 | 1_1:+61151818 | Msa0033590:three_prime_UTR |
| CGTGCCGCCGACACCTCCGG+TGG | 0.685458 | 1_1:-61145392 | None:intergenic |
| AGGTATTGAATTCCATACTG+AGG | 0.687621 | 1_1:+61147744 | Msa0033590:CDS |
| AGACAATACATGAAATAGCG+GGG | 0.688655 | 1_1:+61151702 | Msa0033590:three_prime_UTR |
| AAAGACCAGCAAAGGTACCG+TGG | 0.688890 | 1_1:+61147813 | Msa0033590:CDS |
| CTGAGGAGTTTGTCACCATG+AGG | 0.689480 | 1_1:+61150000 | Msa0033590:CDS |
| CCCGGTCTGGAAGCCCAGAG+AGG | 0.691224 | 1_1:-61149729 | None:intergenic |
| ATCTCATCGGATACCACCGG+AGG | 0.706409 | 1_1:+61145379 | Msa0033590:CDS |
| AATATGAGAGAAACCATCCA+CGG | 0.716565 | 1_1:-61147830 | None:intergenic |
| TTGTGCAGCTGTGTAATACG+TGG | 0.758121 | 1_1:+61147001 | Msa0033590:intron |
| TGGAGGAGTTGGTCTCACAG+AGG | 0.772688 | 1_1:+61149534 | Msa0033590:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGTTTTAATATATTCTA+GGG | + | chr1_1:61150533-61150552 | Msa0033590:intron | 10.0% |
| !! | GAGAAAAAAAATTAAAAAAA+TGG | - | chr1_1:61150883-61150902 | None:intergenic | 10.0% |
| !!! | GATTTTTTGTATTGATTATT+AGG | + | chr1_1:61146507-61146526 | Msa0033590:intron | 15.0% |
| !!! | TTTTAGCATATGAAATAATT+TGG | + | chr1_1:61148012-61148031 | Msa0033590:intron | 15.0% |
| !! | TTTCCATATTTATCAAAATT+AGG | + | chr1_1:61148287-61148306 | Msa0033590:intron | 15.0% |
| !!! | ATTATGATTTACTAACATTT+TGG | + | chr1_1:61149632-61149651 | Msa0033590:intron | 15.0% |
| !! | AATATGATACTTAATTCATT+TGG | + | chr1_1:61150331-61150350 | Msa0033590:intron | 15.0% |
| !! | ATATGATACTTAATTCATTT+GGG | + | chr1_1:61150332-61150351 | Msa0033590:intron | 15.0% |
| !!! | GTTTTGTTTTAATATATTCT+AGG | + | chr1_1:61150532-61150551 | Msa0033590:intron | 15.0% |
| !!! | ATTAAAAAAATGGATTTTGT+AGG | - | chr1_1:61150873-61150892 | None:intergenic | 15.0% |
| !!! | TTTGATTAAATGATTTTTTG+TGG | + | chr1_1:61151059-61151078 | Msa0033590:intron | 15.0% |
| !! | ATGATTTATTCACAAAAAAA+AGG | + | chr1_1:61151099-61151118 | Msa0033590:intron | 15.0% |
| !! | AGTGAAAAATAAATTACAAA+TGG | - | chr1_1:61151776-61151795 | None:intergenic | 15.0% |
| !!! | ATGAGTTGAATAATACAAAT+TGG | - | chr1_1:61144954-61144973 | None:intergenic | 20.0% |
| !!! | TTTTAGTTAATTTCACAGTT+AGG | + | chr1_1:61145454-61145473 | Msa0033590:intron | 20.0% |
| !!! | ATTTGAATAACCAACTTTTT+AGG | + | chr1_1:61146033-61146052 | Msa0033590:intron | 20.0% |
| !! | AAATTAACAACCTAAAAAGT+TGG | - | chr1_1:61146046-61146065 | None:intergenic | 20.0% |
| !! | GTTAATTTAGTTGAAATATG+TGG | + | chr1_1:61146058-61146077 | Msa0033590:intron | 20.0% |
| !!! | TTTTCTCTGAAAAAAAGAAA+TGG | - | chr1_1:61146415-61146434 | None:intergenic | 20.0% |
| !! | TTAAACAATCTTTAAACTGT+TGG | - | chr1_1:61146673-61146692 | None:intergenic | 20.0% |
| !! | TACATTCAATAGATAGTTAA+TGG | - | chr1_1:61146869-61146888 | None:intergenic | 20.0% |
| !! | TTACAAAGCTATTTATTACA+TGG | - | chr1_1:61147263-61147282 | None:intergenic | 20.0% |
| !!! | TAGTGCTTATAATCTTTTTT+TGG | - | chr1_1:61147977-61147996 | None:intergenic | 20.0% |
| !!! | TGCTAAAAGAGTATTTTTTT+TGG | - | chr1_1:61148000-61148019 | None:intergenic | 20.0% |
| !! | ATTCATGTAATATTAAGCAA+GGG | - | chr1_1:61148241-61148260 | None:intergenic | 20.0% |
| !! | TATTCATGTAATATTAAGCA+AGG | - | chr1_1:61148242-61148261 | None:intergenic | 20.0% |
| !!! | GTTCCTAATTTTGATAAATA+TGG | - | chr1_1:61148293-61148312 | None:intergenic | 20.0% |
| !! | AATGTATATTACCTATAATC+AGG | - | chr1_1:61148786-61148805 | None:intergenic | 20.0% |
| !! | ACAAGCATTAAAAATTGAAT+TGG | + | chr1_1:61148946-61148965 | Msa0033590:intron | 20.0% |
| !! | TCATTTGTAGATATATTGAA+TGG | + | chr1_1:61149402-61149421 | Msa0033590:intron | 20.0% |
| !! | ATTCATATGGAAATGATATA+TGG | + | chr1_1:61150375-61150394 | Msa0033590:intron | 20.0% |
| !! | AATGATATATGGTACAAAAT+TGG | + | chr1_1:61150386-61150405 | Msa0033590:intron | 20.0% |
| !! | ATGATATATGGTACAAAATT+GGG | + | chr1_1:61150387-61150406 | Msa0033590:intron | 20.0% |
| !!! | TTTTCTAAAAGTTTTCGTAA+TGG | + | chr1_1:61150507-61150526 | Msa0033590:intron | 20.0% |
| !!! | TTTTGTAGGTAATAAGAAAT+GGG | - | chr1_1:61150859-61150878 | None:intergenic | 20.0% |
| !!! | ATTTTGTAGGTAATAAGAAA+TGG | - | chr1_1:61150860-61150879 | None:intergenic | 20.0% |
| !!! | AAGGTTTAAAATGATTAAGT+TGG | + | chr1_1:61151118-61151137 | Msa0033590:intron | 20.0% |
| !!! | ATTTTTAATAATGTTTACGC+AGG | + | chr1_1:61151641-61151660 | Msa0033590:intron | 20.0% |
| !!! | GATCATTTTATTTAACATCA+AGG | - | chr1_1:61151845-61151864 | None:intergenic | 20.0% |
| !!! | GAATAATACAAATTGGTCTT+TGG | - | chr1_1:61144947-61144966 | None:intergenic | 25.0% |
| ! | AGATGTTGTTAATATGATGT+GGG | + | chr1_1:61145538-61145557 | Msa0033590:intron | 25.0% |
| ! | TAATGAGAACGTTGTAAAAA+TGG | + | chr1_1:61145629-61145648 | Msa0033590:intron | 25.0% |
| ! | CATTTCTCTATCATGTTATT+AGG | - | chr1_1:61145660-61145679 | None:intergenic | 25.0% |
| ! | GTCTAAAAGTTGTCAAAAAA+TGG | - | chr1_1:61145695-61145714 | None:intergenic | 25.0% |
| !! | TTTTCATTGGTCAAAAACAA+TGG | - | chr1_1:61145775-61145794 | None:intergenic | 25.0% |
| ! | TCATAAAAGTTGTTAGCAAA+TGG | + | chr1_1:61145813-61145832 | Msa0033590:intron | 25.0% |
| ! | TTGAAATATGTGGTTAATCA+TGG | + | chr1_1:61146068-61146087 | Msa0033590:intron | 25.0% |
| ! | TAATCATGGTATATAGTTCA+TGG | + | chr1_1:61146082-61146101 | Msa0033590:intron | 25.0% |
| ! | GTTAGAAGAACACATATATT+AGG | + | chr1_1:61146296-61146315 | Msa0033590:intron | 25.0% |
| !!! | TTTTAAGAGAAGCATTTCTT+TGG | + | chr1_1:61146442-61146461 | Msa0033590:intron | 25.0% |
| !!! | TTTGTATTGATTATTAGGAG+TGG | + | chr1_1:61146512-61146531 | Msa0033590:intron | 25.0% |
| !!! | TTGTATTGATTATTAGGAGT+GGG | + | chr1_1:61146513-61146532 | Msa0033590:intron | 25.0% |
| !! | AAAATTGTGTATCTAAAACC+AGG | + | chr1_1:61146602-61146621 | Msa0033590:intron | 25.0% |
| !! | AAATTGTGTATCTAAAACCA+GGG | + | chr1_1:61146603-61146622 | Msa0033590:intron | 25.0% |
| !! | ATTTTCCAAAAACCAAATAC+GGG | - | chr1_1:61146640-61146659 | None:intergenic | 25.0% |
| !! | CATTTTCCAAAAACCAAATA+CGG | - | chr1_1:61146641-61146660 | None:intergenic | 25.0% |
| !! | AACTTTCATGACAACTTTTA+AGG | - | chr1_1:61146922-61146941 | None:intergenic | 25.0% |
| ! | TCATGAAAGTTGTTCAAATT+TGG | + | chr1_1:61146931-61146950 | Msa0033590:intron | 25.0% |
| ! | AGCTATTTATTACATGGAAA+TGG | - | chr1_1:61147257-61147276 | None:intergenic | 25.0% |
| ! | AACTGAAACTAAAATGTGTT+TGG | - | chr1_1:61147392-61147411 | None:intergenic | 25.0% |
| !!! | AAACACATTTTAGTTTCAGT+TGG | + | chr1_1:61147391-61147410 | Msa0033590:CDS | 25.0% |
| ! | AAACTTCATACCTTAGTATT+AGG | - | chr1_1:61147877-61147896 | None:intergenic | 25.0% |
| ! | TAGCATATGAAATAATTTGG+AGG | + | chr1_1:61148015-61148034 | Msa0033590:intron | 25.0% |
| ! | AGCATATGAAATAATTTGGA+GGG | + | chr1_1:61148016-61148035 | Msa0033590:intron | 25.0% |
| ! | TTCTGATTGAAGGTAATTAT+TGG | - | chr1_1:61148062-61148081 | None:intergenic | 25.0% |
| ! | TTCATGTAATATTAAGCAAG+GGG | - | chr1_1:61148240-61148259 | None:intergenic | 25.0% |
| ! | ATTATAAATGGTTAAGCAGT+TGG | - | chr1_1:61148906-61148925 | None:intergenic | 25.0% |
| !! | TTACACCATTGTTTCTTAAA+TGG | + | chr1_1:61149116-61149135 | Msa0033590:intron | 25.0% |
| ! | AGAATATAACACAATCTGTT+AGG | - | chr1_1:61149467-61149486 | None:intergenic | 25.0% |
| !! | CTATTAGTTTCATAAAAACC+CGG | - | chr1_1:61149750-61149769 | None:intergenic | 25.0% |
| !! | TAAGATTTTGCATGATAAAC+AGG | + | chr1_1:61149902-61149921 | Msa0033590:intron | 25.0% |
| !! | AAGATTTTGCATGATAAACA+GGG | + | chr1_1:61149903-61149922 | Msa0033590:intron | 25.0% |
| ! | AAAGCAATATTGTTAAGTTC+CGG | - | chr1_1:61150588-61150607 | None:intergenic | 25.0% |
| !! | AGAACTTTTGTGTTATACTA+TGG | + | chr1_1:61150719-61150738 | Msa0033590:intron | 25.0% |
| ! | TAATAAGAAATGGGAAATTG+GGG | - | chr1_1:61150850-61150869 | None:intergenic | 25.0% |
| ! | GTAATAAGAAATGGGAAATT+GGG | - | chr1_1:61150851-61150870 | None:intergenic | 25.0% |
| !!! | ATTTTTTTTCTCTCCATTGA+TGG | + | chr1_1:61150891-61150910 | Msa0033590:intron | 25.0% |
| ! | TAGTTACAAAACTCAGAATT+TGG | + | chr1_1:61150944-61150963 | Msa0033590:intron | 25.0% |
| !! | ACAAAATTTGAAGTATCTTG+TGG | + | chr1_1:61150976-61150995 | Msa0033590:intron | 25.0% |
| !! | CAAAATTTGAAGTATCTTGT+GGG | + | chr1_1:61150977-61150996 | Msa0033590:intron | 25.0% |
| !! | AAAAGACTTGACTACATTTT+CGG | - | chr1_1:61151250-61151269 | None:intergenic | 25.0% |
| !!! | CTTATTTAATTTGAAGCAGT+TGG | + | chr1_1:61151868-61151887 | Msa0033590:three_prime_UTR | 25.0% |
| ! | TAATTTATCCTGCACAAAAT+AGG | + | chr1_1:61151971-61151990 | Msa0033590:three_prime_UTR | 25.0% |
| GTTCGTAAAACTTACTCATT+TGG | - | chr1_1:61145512-61145531 | None:intergenic | 30.0% | |
| CACATCATATTAACAACATC+TGG | - | chr1_1:61145539-61145558 | None:intergenic | 30.0% | |
| CAGATGTTGTTAATATGATG+TGG | + | chr1_1:61145537-61145556 | Msa0033590:intron | 30.0% | |
| AAAACAATGGAGAGAGAAAA+AGG | - | chr1_1:61145762-61145781 | None:intergenic | 30.0% | |
| ! | TCTCTTTTCTCTCTTTTCAT+TGG | - | chr1_1:61145788-61145807 | None:intergenic | 30.0% |
| AATGAAAAGAGAGAAAAGAG+AGG | + | chr1_1:61145787-61145806 | Msa0033590:intron | 30.0% | |
| CATTGCTCAACATGATATTA+TGG | + | chr1_1:61145848-61145867 | Msa0033590:intron | 30.0% | |
| AGCAAATTAGCAAGTCAATA+AGG | - | chr1_1:61145950-61145969 | None:intergenic | 30.0% | |
| AATGTTTAACCAAAGCGAAA+AGG | - | chr1_1:61145973-61145992 | None:intergenic | 30.0% | |
| !! | TTCTCGTGTTTTTGTCAAAT+GGG | - | chr1_1:61146168-61146187 | None:intergenic | 30.0% |
| !! | ATTCTCGTGTTTTTGTCAAA+TGG | - | chr1_1:61146169-61146188 | None:intergenic | 30.0% |
| AACACGAGAATTAAGAAAGT+TGG | + | chr1_1:61146178-61146197 | Msa0033590:intron | 30.0% | |
| CTCTCTATGATGAAATCATT+GGG | - | chr1_1:61146256-61146275 | None:intergenic | 30.0% | |
| AGAAGAACACATATATTAGG+AGG | + | chr1_1:61146299-61146318 | Msa0033590:intron | 30.0% | |
| ATTTGAACACTAGACTGATT+GGG | + | chr1_1:61146332-61146351 | Msa0033590:intron | 30.0% | |
| !!! | CGTATTTGGTTTTTGGAAAA+TGG | + | chr1_1:61146639-61146658 | Msa0033590:intron | 30.0% |
| ATCTAAAGACTTGAAAGTAG+TGG | - | chr1_1:61146766-61146785 | None:intergenic | 30.0% | |
| AGTTGAACACCTGAAAATTA+TGG | + | chr1_1:61146794-61146813 | Msa0033590:intron | 30.0% | |
| ATCTCATTAACCACGTATTT+GGG | - | chr1_1:61146829-61146848 | None:intergenic | 30.0% | |
| AATCTCATTAACCACGTATT+TGG | - | chr1_1:61146830-61146849 | None:intergenic | 30.0% | |
| !! | TTTCATGACAACTTTTAAGG+CGG | - | chr1_1:61146919-61146938 | None:intergenic | 30.0% |
| ! | AAATTCGTGAGAAGATTTTG+AGG | - | chr1_1:61147056-61147075 | None:intergenic | 30.0% |
| ! | TTTGAAGAAAGCAATGGTTT+TGG | + | chr1_1:61147073-61147092 | Msa0033590:CDS | 30.0% |
| !! | TCTAATGTCAAGTTGATTGA+AGG | + | chr1_1:61147202-61147221 | Msa0033590:CDS | 30.0% |
| !! | AGGTTTTGATGGTAAATCAA+GGG | - | chr1_1:61147476-61147495 | None:intergenic | 30.0% |
| TGTATTTATACGACAAAAGC+AGG | + | chr1_1:61147576-61147595 | Msa0033590:CDS | 30.0% | |
| ! | AGATTTTGTCGCAGAAAATA+TGG | + | chr1_1:61147714-61147733 | Msa0033590:CDS | 30.0% |
| ! | TCTCATATTATGTTTGCTAC+AGG | + | chr1_1:61147844-61147863 | Msa0033590:CDS | 30.0% |
| GATTGAAGGTAATTATTGGA+AGG | - | chr1_1:61148058-61148077 | None:intergenic | 30.0% | |
| TTCAATGACTTTCTGATTGA+AGG | - | chr1_1:61148072-61148091 | None:intergenic | 30.0% | |
| CAATCAGAAAGTCATTGAAA+AGG | + | chr1_1:61148073-61148092 | Msa0033590:intron | 30.0% | |
| ! | TTTTCCCATGATACACTTTT+AGG | + | chr1_1:61148172-61148191 | Msa0033590:intron | 30.0% |
| ! | AAGTCCTAAAAGTGTATCAT+GGG | - | chr1_1:61148179-61148198 | None:intergenic | 30.0% |
| TTAAAATTAGCCAACCCTTA+AGG | - | chr1_1:61148332-61148351 | None:intergenic | 30.0% | |
| AGATAAACAGACAGTTGAAA+CGG | - | chr1_1:61148424-61148443 | None:intergenic | 30.0% | |
| TACAGAAAGAGCTAATAACA+TGG | + | chr1_1:61148453-61148472 | Msa0033590:intron | 30.0% | |
| ACAATTTCACTGCAGAATTT+AGG | + | chr1_1:61148494-61148513 | Msa0033590:intron | 30.0% | |
| TGATGAATACTCTCAAACAT+CGG | + | chr1_1:61148647-61148666 | Msa0033590:CDS | 30.0% | |
| !! | TACCTATAATCAGGTTTTGT+TGG | - | chr1_1:61148777-61148796 | None:intergenic | 30.0% |
| ACTGAAGTCAATCTTTAATC+AGG | - | chr1_1:61148831-61148850 | None:intergenic | 30.0% | |
| ATCAGGGAGATCATTATAAA+TGG | - | chr1_1:61148918-61148937 | None:intergenic | 30.0% | |
| ! | GTTTTTGACACGAATTTGTA+TGG | + | chr1_1:61149058-61149077 | Msa0033590:intron | 30.0% |
| CTTGACCATTTAAGAAACAA+TGG | - | chr1_1:61149124-61149143 | None:intergenic | 30.0% | |
| ! | GAGCTTTAATGGTTTAAAAG+AGG | + | chr1_1:61149185-61149204 | Msa0033590:intron | 30.0% |
| CTTTAATGGTTTAAAAGAGG+TGG | + | chr1_1:61149188-61149207 | Msa0033590:intron | 30.0% | |
| GTGCAAAAAATGAGATGAAT+AGG | - | chr1_1:61149352-61149371 | None:intergenic | 30.0% | |
| ATATAACACAATCTGTTAGG+AGG | - | chr1_1:61149464-61149483 | None:intergenic | 30.0% | |
| !!! | AACATTTTGGTTATTTGCAC+AGG | + | chr1_1:61149645-61149664 | Msa0033590:intron | 30.0% |
| TGCAAAAACAAATGAAGTTC+TGG | + | chr1_1:61149774-61149793 | Msa0033590:CDS | 30.0% | |
| GCAAAAACAAATGAAGTTCT+GGG | + | chr1_1:61149775-61149794 | Msa0033590:CDS | 30.0% | |
| ! | AGATTTTGCATGATAAACAG+GGG | + | chr1_1:61149904-61149923 | Msa0033590:intron | 30.0% |
| TATTAAAGCTGGATTGACAA+AGG | + | chr1_1:61149938-61149957 | Msa0033590:CDS | 30.0% | |
| ATTTCTGCACAAGATATCAA+CGG | - | chr1_1:61150094-61150113 | None:intergenic | 30.0% | |
| TCTTTCAATTCTCAAGTACA+AGG | - | chr1_1:61150192-61150211 | None:intergenic | 30.0% | |
| AAAAAAAAAAATCCCTGTGC+AGG | + | chr1_1:61150236-61150255 | Msa0033590:intron | 30.0% | |
| ACCACATGTCATTATTCATA+TGG | + | chr1_1:61150362-61150381 | Msa0033590:intron | 30.0% | |
| TCCATATGAATAATGACATG+TGG | - | chr1_1:61150366-61150385 | None:intergenic | 30.0% | |
| !! | CATTTCCAACCATGTTTTTA+TGG | + | chr1_1:61150461-61150480 | Msa0033590:intron | 30.0% |
| CTAAGAGAACCATAAAAACA+TGG | - | chr1_1:61150473-61150492 | None:intergenic | 30.0% | |
| AGTATTTCATCCTTACCTTA+AGG | - | chr1_1:61150645-61150664 | None:intergenic | 30.0% | |
| GTATACTAGATACTAGGTTT+AGG | + | chr1_1:61150744-61150763 | Msa0033590:intron | 30.0% | |
| TCTCTATTATTATCAACCCT+TGG | + | chr1_1:61150786-61150805 | Msa0033590:intron | 30.0% | |
| ! | TTATTATCAACCCTTGGTTT+TGG | + | chr1_1:61150792-61150811 | Msa0033590:intron | 30.0% |
| TATTGAATGTCCAAAACCAA+GGG | - | chr1_1:61150805-61150824 | None:intergenic | 30.0% | |
| TTATTGAATGTCCAAAACCA+AGG | - | chr1_1:61150806-61150825 | None:intergenic | 30.0% | |
| GGTAATAAGAAATGGGAAAT+TGG | - | chr1_1:61150852-61150871 | None:intergenic | 30.0% | |
| !! | ATGTGGAGATTTTTAGGAAA+AGG | + | chr1_1:61151147-61151166 | Msa0033590:intron | 30.0% |
| !! | TGTGGAGATTTTTAGGAAAA+GGG | + | chr1_1:61151148-61151167 | Msa0033590:intron | 30.0% |
| !! | TTTTTAGGAAAAGGGGAATT+TGG | + | chr1_1:61151156-61151175 | Msa0033590:intron | 30.0% |
| !! | TTTTAGGAAAAGGGGAATTT+GGG | + | chr1_1:61151157-61151176 | Msa0033590:intron | 30.0% |
| ATCTTATCCATGTGTTATAG+CGG | + | chr1_1:61151273-61151292 | Msa0033590:intron | 30.0% | |
| !!! | TGGTAGTGGATTTTATACAA+TGG | - | chr1_1:61151404-61151423 | None:intergenic | 30.0% |
| GTTCAAAGAATAAGTAGTAG+TGG | - | chr1_1:61151424-61151443 | None:intergenic | 30.0% | |
| CAAGACAATACATGAAATAG+CGG | + | chr1_1:61151700-61151719 | Msa0033590:three_prime_UTR | 30.0% | |
| AAGACAATACATGAAATAGC+GGG | + | chr1_1:61151701-61151720 | Msa0033590:three_prime_UTR | 30.0% | |
| TTCCTCTGAATATGTACAAA+GGG | - | chr1_1:61151809-61151828 | None:intergenic | 30.0% | |
| TTTCCTCTGAATATGTACAA+AGG | - | chr1_1:61151810-61151829 | None:intergenic | 30.0% | |
| ! | AACTTTTCAAACTTTTCGCA+TGG | + | chr1_1:61151938-61151957 | Msa0033590:three_prime_UTR | 30.0% |
| !! | AATACAAATTGGTCTTTGGC+TGG | - | chr1_1:61144943-61144962 | None:intergenic | 35.0% |
| GACGTGTTAAATAAGCACTT+TGG | + | chr1_1:61144998-61145017 | Msa0033590:five_prime_UTR | 35.0% | |
| GAATAAGAAACCCTAAGCTA+TGG | - | chr1_1:61145430-61145449 | None:intergenic | 35.0% | |
| TTATACCGATATTGCTAGGT+TGG | - | chr1_1:61145489-61145508 | None:intergenic | 35.0% | |
| TTGGTTATACCGATATTGCT+AGG | - | chr1_1:61145493-61145512 | None:intergenic | 35.0% | |
| !!! | TAATTTGCTCCTTTTCGCTT+TGG | + | chr1_1:61145961-61145980 | Msa0033590:intron | 35.0% |
| !! | TCTCGTGTTTTTGTCAAATG+GGG | - | chr1_1:61146167-61146186 | None:intergenic | 35.0% |
| GCTCTCTATGATGAAATCAT+TGG | - | chr1_1:61146257-61146276 | None:intergenic | 35.0% | |
| GATTTGAACACTAGACTGAT+TGG | + | chr1_1:61146331-61146350 | Msa0033590:intron | 35.0% | |
| AAAACCAAATACGGGATAAC+CGG | - | chr1_1:61146632-61146651 | None:intergenic | 35.0% | |
| !!! | GTTATCCCGTATTTGGTTTT+TGG | + | chr1_1:61146632-61146651 | Msa0033590:intron | 35.0% |
| !! | GGTTTTTGGAAAATGGTACT+TGG | + | chr1_1:61146646-61146665 | Msa0033590:intron | 35.0% |
| TTAACAGCTACTGAAGTTAG+AGG | - | chr1_1:61146728-61146747 | None:intergenic | 35.0% | |
| ! | CGTGGTTAACCATAATTTTC+AGG | - | chr1_1:61146806-61146825 | None:intergenic | 35.0% |
| GTCAACACAGTTTAAATGAG+TGG | - | chr1_1:61146897-61146916 | None:intergenic | 35.0% | |
| CACAAAGATATGCATGTAGA+TGG | - | chr1_1:61146986-61147005 | None:intergenic | 35.0% | |
| GCATAGACGAGTAATTTCTT+TGG | - | chr1_1:61147034-61147053 | None:intergenic | 35.0% | |
| CACGAATTTGAAGAAAGCAA+TGG | + | chr1_1:61147067-61147086 | Msa0033590:CDS | 35.0% | |
| !!! | AAGAAAGCAATGGTTTTGGA+TGG | + | chr1_1:61147077-61147096 | Msa0033590:CDS | 35.0% |
| AAACTACTCCAATCATGCTT+AGG | - | chr1_1:61147118-61147137 | None:intergenic | 35.0% | |
| ATAAAAATGCTGAGTTGCAG+AGG | + | chr1_1:61147146-61147165 | Msa0033590:CDS | 35.0% | |
| !!! | CACATTTTAGTTTCAGTTGG+AGG | + | chr1_1:61147394-61147413 | Msa0033590:CDS | 35.0% |
| TATTCCTTTCCAGGAATATC+AGG | - | chr1_1:61147433-61147452 | None:intergenic | 35.0% | |
| TCTATTGCATATTCCTTTCC+AGG | - | chr1_1:61147442-61147461 | None:intergenic | 35.0% | |
| !! | CAGGTTTTGATGGTAAATCA+AGG | - | chr1_1:61147477-61147496 | None:intergenic | 35.0% |
| !! | GAGTTTGCTGGTATCTTTAA+TGG | + | chr1_1:61147535-61147554 | Msa0033590:CDS | 35.0% |
| !! | AGGTATTGAATTCCATACTG+AGG | + | chr1_1:61147744-61147763 | Msa0033590:CDS | 35.0% |
| AATATGAGAGAAACCATCCA+CGG | - | chr1_1:61147833-61147852 | None:intergenic | 35.0% | |
| !! | GATGCTAAAAGAGTATTTGC+TGG | - | chr1_1:61147950-61147969 | None:intergenic | 35.0% |
| ! | CAAGTCCTAAAAGTGTATCA+TGG | - | chr1_1:61148180-61148199 | None:intergenic | 35.0% |
| AATTCCACATGCTTCTTAGT+TGG | + | chr1_1:61148350-61148369 | Msa0033590:intron | 35.0% | |
| ! | TAGTTGGCTCAATTTCCATA+CGG | + | chr1_1:61148366-61148385 | Msa0033590:intron | 35.0% |
| TGCTAAAGATGGATCAATAG+AGG | + | chr1_1:61148541-61148560 | Msa0033590:CDS | 35.0% | |
| !! | TTGAGAGTATTCATCAACCT+GGG | - | chr1_1:61148643-61148662 | None:intergenic | 35.0% |
| !! | TTTGAGAGTATTCATCAACC+TGG | - | chr1_1:61148644-61148663 | None:intergenic | 35.0% |
| !! | AAACATCGGTTCCTTCAATT+TGG | + | chr1_1:61148661-61148680 | Msa0033590:CDS | 35.0% |
| !! | AACATCGGTTCCTTCAATTT+GGG | + | chr1_1:61148662-61148681 | Msa0033590:CDS | 35.0% |
| AGCCAACAAAACCTGATTAT+AGG | + | chr1_1:61148772-61148791 | Msa0033590:CDS | 35.0% | |
| ! | ATGCTTGTTAAGCAAGATCA+GGG | - | chr1_1:61148934-61148953 | None:intergenic | 35.0% |
| ! | AATGCTTGTTAAGCAAGATC+AGG | - | chr1_1:61148935-61148954 | None:intergenic | 35.0% |
| GGTTTAAAAGAGGTGGAAAA+AGG | + | chr1_1:61149195-61149214 | Msa0033590:intron | 35.0% | |
| GGAAAAAGGAAAATGACTAG+AGG | + | chr1_1:61149209-61149228 | Msa0033590:intron | 35.0% | |
| TTGAATGGCAGCATATAATC+TGG | + | chr1_1:61149417-61149436 | Msa0033590:intron | 35.0% | |
| ! | ACGTCTACACAGCAAATTTT+AGG | + | chr1_1:61149692-61149711 | Msa0033590:CDS | 35.0% |
| ACAAAAACCTGCACAATTTC+AGG | - | chr1_1:61149826-61149845 | None:intergenic | 35.0% | |
| ! | TTTGCAGTTGCTATTAAAGC+TGG | + | chr1_1:61149927-61149946 | Msa0033590:CDS | 35.0% |
| CTTGATTTACCTGTGAATCA+AGG | - | chr1_1:61150052-61150071 | None:intergenic | 35.0% | |
| CTTGATTCACAGGTAAATCA+AGG | + | chr1_1:61150050-61150069 | Msa0033590:intron | 35.0% | |
| GAAGTCGACGTATTCATTAA+TGG | - | chr1_1:61150164-61150183 | None:intergenic | 35.0% | |
| AATTCTCAAGTACAAGGCAA+CGG | - | chr1_1:61150186-61150205 | None:intergenic | 35.0% | |
| TTAACAGACCCAAGTAATCA+TGG | - | chr1_1:61150262-61150281 | None:intergenic | 35.0% | |
| GAGAACCATAAAAACATGGT+TGG | - | chr1_1:61150469-61150488 | None:intergenic | 35.0% | |
| ATGGCAGTATACTAGATACT+AGG | + | chr1_1:61150738-61150757 | Msa0033590:intron | 35.0% | |
| GTCTGTAAAGGAGAAATTTC+AGG | + | chr1_1:61151013-61151032 | Msa0033590:intron | 35.0% | |
| ! | TTCAGCATGTGGAGATTTTT+AGG | + | chr1_1:61151141-61151160 | Msa0033590:intron | 35.0% |
| !! | GTGGAGATTTTTAGGAAAAG+GGG | + | chr1_1:61151149-61151168 | Msa0033590:intron | 35.0% |
| TTTAGGAAAAGGGGAATTTG+GGG | + | chr1_1:61151158-61151177 | Msa0033590:intron | 35.0% | |
| AGAATAAGTAGTAGTGGTAG+TGG | - | chr1_1:61151418-61151437 | None:intergenic | 35.0% | |
| !!! | ACATACATTCCTGCCATTTT+GGG | - | chr1_1:61151484-61151503 | None:intergenic | 35.0% |
| !! | AACATACATTCCTGCCATTT+TGG | - | chr1_1:61151485-61151504 | None:intergenic | 35.0% |
| TTACCAATGCAACATGTTTC+CGG | + | chr1_1:61151532-61151551 | Msa0033590:intron | 35.0% | |
| TATTAGAACATGACAAACGC+CGG | - | chr1_1:61151554-61151573 | None:intergenic | 35.0% | |
| !!! | TTGCTTTTTCGAATGATCTC+CGG | + | chr1_1:61151665-61151684 | Msa0033590:three_prime_UTR | 35.0% |
| AGACAATACATGAAATAGCG+GGG | + | chr1_1:61151702-61151721 | Msa0033590:three_prime_UTR | 35.0% | |
| TGAATATGTACAAAGGGATG+AGG | - | chr1_1:61151803-61151822 | None:intergenic | 35.0% | |
| ATCCCTTTGTACATATTCAG+AGG | + | chr1_1:61151804-61151823 | Msa0033590:three_prime_UTR | 35.0% | |
| TATTCAGAGGAAATCTCATG+AGG | + | chr1_1:61151817-61151836 | Msa0033590:three_prime_UTR | 35.0% | |
| ATTCAGAGGAAATCTCATGA+GGG | + | chr1_1:61151818-61151837 | Msa0033590:three_prime_UTR | 35.0% | |
| ! | AAACTTTTCGCATGGAAAAG+TGG | + | chr1_1:61151946-61151965 | Msa0033590:three_prime_UTR | 35.0% |
| TTATCCTGCACAAAATAGGA+TGG | + | chr1_1:61151975-61151994 | Msa0033590:three_prime_UTR | 35.0% | |
| TATCCTGCACAAAATAGGAT+GGG | + | chr1_1:61151976-61151995 | Msa0033590:three_prime_UTR | 35.0% | |
| TAAGGGAGAAGAACAAGAGA+GGG | - | chr1_1:61145086-61145105 | None:intergenic | 40.0% | |
| ! | AGAGTGTTTCGGGTAAGTAA+GGG | - | chr1_1:61145103-61145122 | None:intergenic | 40.0% |
| !! | TGGTGAAGAAGAGAGTGTTT+CGG | - | chr1_1:61145114-61145133 | None:intergenic | 40.0% |
| !! | TTGAGAGATTAGGGTTTTGG+TGG | - | chr1_1:61145182-61145201 | None:intergenic | 40.0% |
| ! | GGATTGAGAGATTAGGGTTT+TGG | - | chr1_1:61145185-61145204 | None:intergenic | 40.0% |
| ! | TCACGCTTTGCTTCCAATTT+TGG | + | chr1_1:61145319-61145338 | Msa0033590:CDS | 40.0% |
| AAGTTCCTCTTCCATAGCTT+AGG | + | chr1_1:61145416-61145435 | Msa0033590:intron | 40.0% | |
| AGTTCCTCTTCCATAGCTTA+GGG | + | chr1_1:61145417-61145436 | Msa0033590:intron | 40.0% | |
| AGTGTCCAACCTAGCAATAT+CGG | + | chr1_1:61145481-61145500 | Msa0033590:intron | 40.0% | |
| CATCTGCTTTCAGAAAGACA+AGG | - | chr1_1:61146009-61146028 | None:intergenic | 40.0% | |
| CTACCCTCGTCTCTAAATAT+AGG | + | chr1_1:61146140-61146159 | Msa0033590:intron | 40.0% | |
| GGTCCTATATTTAGAGACGA+GGG | - | chr1_1:61146146-61146165 | None:intergenic | 40.0% | |
| AACACTAGACTGATTGGGTT+TGG | + | chr1_1:61146337-61146356 | Msa0033590:intron | 40.0% | |
| ACACTAGACTGATTGGGTTT+GGG | + | chr1_1:61146338-61146357 | Msa0033590:intron | 40.0% | |
| !! | TTCTTTGGCTTGTTGAAGTG+TGG | + | chr1_1:61146457-61146476 | Msa0033590:intron | 40.0% |
| CTTGTTGAAGTGTGGTATTG+TGG | + | chr1_1:61146465-61146484 | Msa0033590:intron | 40.0% | |
| ! | TTTAAGAGAGAGTGTGAGAG+AGG | + | chr1_1:61146688-61146707 | Msa0033590:intron | 40.0% |
| ACAGTGAACCTAAGCATGAT+TGG | + | chr1_1:61147107-61147126 | Msa0033590:CDS | 40.0% | |
| ! | CTCACACAGTTGATGTTGAT+GGG | + | chr1_1:61147353-61147372 | Msa0033590:CDS | 40.0% |
| CCAGGAATATCAGGAATGAA+GGG | - | chr1_1:61147424-61147443 | None:intergenic | 40.0% | |
| TCCAGGAATATCAGGAATGA+AGG | - | chr1_1:61147425-61147444 | None:intergenic | 40.0% | |
| CATTCCTGATATTCCTGGAA+AGG | + | chr1_1:61147426-61147445 | Msa0033590:CDS | 40.0% | |
| !! | GCAATCTTCTCAGGTTTTGA+TGG | - | chr1_1:61147487-61147506 | None:intergenic | 40.0% |
| AGAAGATTGCCATTGTTGGT+GGG | + | chr1_1:61147497-61147516 | Msa0033590:CDS | 40.0% | |
| AAAGATACCAGCAAACTCCA+AGG | - | chr1_1:61147533-61147552 | None:intergenic | 40.0% | |
| TTTGCGAGGATTTGATGAAG+AGG | + | chr1_1:61147600-61147619 | Msa0033590:CDS | 40.0% | |
| !! | GCAGAAAATATGGCTCTAAG+AGG | + | chr1_1:61147724-61147743 | Msa0033590:CDS | 40.0% |
| ATCTCCTGTAGCTATCACTA+AGG | + | chr1_1:61147768-61147787 | Msa0033590:CDS | 40.0% | |
| ! | CTCTCTTTAAAGACCAGCAA+AGG | + | chr1_1:61147805-61147824 | Msa0033590:CDS | 40.0% |
| AGGACGCAAACCTAATACTA+AGG | + | chr1_1:61147864-61147883 | Msa0033590:CDS | 40.0% | |
| AATATTAAGCAAGGGGCTGA+AGG | - | chr1_1:61148233-61148252 | None:intergenic | 40.0% | |
| ATTGAACTCCAGTGTCCTTA+AGG | + | chr1_1:61148314-61148333 | Msa0033590:intron | 40.0% | |
| TTGAACTCCAGTGTCCTTAA+GGG | + | chr1_1:61148315-61148334 | Msa0033590:intron | 40.0% | |
| ! | TTCACTGCAGAATTTAGGAC+TGG | + | chr1_1:61148499-61148518 | Msa0033590:intron | 40.0% |
| ! | AATTTAGGACTGGAGTCTGT+TGG | + | chr1_1:61148509-61148528 | Msa0033590:CDS | 40.0% |
| GGTGTGAAGATTGCTAAAGA+TGG | + | chr1_1:61148530-61148549 | Msa0033590:CDS | 40.0% | |
| ATTCATCAACCTGGGTGAAT+AGG | - | chr1_1:61148635-61148654 | None:intergenic | 40.0% | |
| GTTCCTTCAATTTGGGCAAT+CGG | + | chr1_1:61148669-61148688 | Msa0033590:CDS | 40.0% | |
| GATGATATACAACCACACAC+TGG | - | chr1_1:61148856-61148875 | None:intergenic | 40.0% | |
| TGACACGAATTTGTATGGTG+AGG | + | chr1_1:61149063-61149082 | Msa0033590:intron | 40.0% | |
| ! | CATCATGACGAGAGCTTTAA+TGG | + | chr1_1:61149174-61149193 | Msa0033590:intron | 40.0% |
| CAGAAGATCATTGATCTCGA+TGG | - | chr1_1:61149590-61149609 | None:intergenic | 40.0% | |
| ! | AGCAAATTTTAGGCCACTGA+AGG | + | chr1_1:61149702-61149721 | Msa0033590:CDS | 40.0% |
| AGTTTCATAAAAACCCGGTC+TGG | - | chr1_1:61149745-61149764 | None:intergenic | 40.0% | |
| CTCTTTCGAATCTTCCTAGT+GGG | - | chr1_1:61150029-61150048 | None:intergenic | 40.0% | |
| AAGATATCAACGGAAGACAC+TGG | - | chr1_1:61150084-61150103 | None:intergenic | 40.0% | |
| TAGTATGCTGAACAGAATGC+AGG | - | chr1_1:61150120-61150139 | None:intergenic | 40.0% | |
| ATTGCTAGACTTCTTCGTGA+GGG | - | chr1_1:61150314-61150333 | None:intergenic | 40.0% | |
| TATTGCTAGACTTCTTCGTG+AGG | - | chr1_1:61150315-61150334 | None:intergenic | 40.0% | |
| TGGTTCTCTTAGCATGCTAT+TGG | + | chr1_1:61150481-61150500 | Msa0033590:intron | 40.0% | |
| ! | ACAGCTTTTGCTTCATTGTC+TGG | - | chr1_1:61150563-61150582 | None:intergenic | 40.0% |
| AATGAAGCAAAAGCTGTAGC+CGG | + | chr1_1:61150566-61150585 | Msa0033590:CDS | 40.0% | |
| TCATCCTTACCTTAAGGCAT+CGG | - | chr1_1:61150639-61150658 | None:intergenic | 40.0% | |
| CATTCGTCATGAACCATCAA+TGG | - | chr1_1:61150907-61150926 | None:intergenic | 40.0% | |
| ! | TTGATGGTTCATGACGAATG+TGG | + | chr1_1:61150907-61150926 | Msa0033590:intron | 40.0% |
| TGATGGTTCATGACGAATGT+GGG | + | chr1_1:61150908-61150927 | Msa0033590:intron | 40.0% | |
| ATCTTGTGGGAAGCAAGTTT+AGG | + | chr1_1:61150990-61151009 | Msa0033590:intron | 40.0% | |
| TCTTGTGGGAAGCAAGTTTA+GGG | + | chr1_1:61150991-61151010 | Msa0033590:intron | 40.0% | |
| ! | AGCAAGTTTAGGGTCTGTAA+AGG | + | chr1_1:61151001-61151020 | Msa0033590:intron | 40.0% |
| !! | GATTAAGTTGGTTCAGCATG+TGG | + | chr1_1:61151130-61151149 | Msa0033590:intron | 40.0% |
| TTAGGAAAAGGGGAATTTGG+GGG | + | chr1_1:61151159-61151178 | Msa0033590:intron | 40.0% | |
| CATATTGCCGCTATAACACA+TGG | - | chr1_1:61151283-61151302 | None:intergenic | 40.0% | |
| AAGAAACTCCCAACCCAAAA+TGG | + | chr1_1:61151468-61151487 | Msa0033590:intron | 40.0% | |
| GTAAGGATACAAGAGACTAC+AGG | - | chr1_1:61151516-61151535 | None:intergenic | 40.0% | |
| ! | GGAAACATGTTGCATTGGTA+AGG | - | chr1_1:61151533-61151552 | None:intergenic | 40.0% |
| ! | AAAAGGGGGGAATGGAATTT+TGG | + | chr1_1:61151737-61151756 | Msa0033590:three_prime_UTR | 40.0% |
| ! | AAAGGGGGGAATGGAATTTT+GGG | + | chr1_1:61151738-61151757 | Msa0033590:three_prime_UTR | 40.0% |
| ATCCTGCACAAAATAGGATG+GGG | + | chr1_1:61151977-61151996 | Msa0033590:three_prime_UTR | 40.0% | |
| ACCAATGAAGCAAGCAGCAA+TGG | + | chr1_1:61145048-61145067 | Msa0033590:exon | 45.0% | |
| GTAAGGGAGAAGAACAAGAG+AGG | - | chr1_1:61145087-61145106 | None:intergenic | 45.0% | |
| !! | GAGAGTGTTTCGGGTAAGTA+AGG | - | chr1_1:61145104-61145123 | None:intergenic | 45.0% |
| !! | GGTGAAGAAGAGAGTGTTTC+GGG | - | chr1_1:61145113-61145132 | None:intergenic | 45.0% |
| ! | GCGAGAAAATGGGAAGGTTT+TGG | - | chr1_1:61145134-61145153 | None:intergenic | 45.0% |
| GAGTGAAGGAGCGAGAAAAT+GGG | - | chr1_1:61145144-61145163 | None:intergenic | 45.0% | |
| AGAGTGAAGGAGCGAGAAAA+TGG | - | chr1_1:61145145-61145164 | None:intergenic | 45.0% | |
| TGAAGAGGTCGAAGTCATAG+TGG | - | chr1_1:61145267-61145286 | None:intergenic | 45.0% | |
| AGCAGCGTTAGCACCAAAAT+TGG | - | chr1_1:61145335-61145354 | None:intergenic | 45.0% | |
| TCCGTTCTCCACTATCTCAT+CGG | + | chr1_1:61145366-61145385 | Msa0033590:CDS | 45.0% | |
| !! | TCCGATGAGATAGTGGAGAA+CGG | - | chr1_1:61145370-61145389 | None:intergenic | 45.0% |
| ACTATCTCATCGGATACCAC+CGG | + | chr1_1:61145376-61145395 | Msa0033590:CDS | 45.0% | |
| GAAACCCTAAGCTATGGAAG+AGG | - | chr1_1:61145424-61145443 | None:intergenic | 45.0% | |
| GGGTCCTATATTTAGAGACG+AGG | - | chr1_1:61146147-61146166 | None:intergenic | 45.0% | |
| CACTAGACTGATTGGGTTTG+GGG | + | chr1_1:61146339-61146358 | Msa0033590:intron | 45.0% | |
| ! | GTATCTAAAACCAGGGAAGC+CGG | + | chr1_1:61146610-61146629 | Msa0033590:intron | 45.0% |
| ATTAACCACGTATTTGGGCG+TGG | - | chr1_1:61146824-61146843 | None:intergenic | 45.0% | |
| TTGTGCAGCTGTGTAATACG+TGG | + | chr1_1:61147001-61147020 | Msa0033590:intron | 45.0% | |
| AGAATCATCCCACCTTTCCA+CGG | - | chr1_1:61147228-61147247 | None:intergenic | 45.0% | |
| GGAAAGGTGGGATGATTCTT+TGG | + | chr1_1:61147229-61147248 | Msa0033590:intron | 45.0% | |
| CCATCAACATCAACTGTGTG+AGG | - | chr1_1:61147355-61147374 | None:intergenic | 45.0% | |
| ! | CCTCACACAGTTGATGTTGA+TGG | + | chr1_1:61147352-61147371 | Msa0033590:CDS | 45.0% |
| CCCTTCATTCCTGATATTCC+TGG | + | chr1_1:61147421-61147440 | Msa0033590:CDS | 45.0% | |
| CCAACAATGGCAATCTTCTC+AGG | - | chr1_1:61147496-61147515 | None:intergenic | 45.0% | |
| CCTGAGAAGATTGCCATTGT+TGG | + | chr1_1:61147493-61147512 | Msa0033590:CDS | 45.0% | |
| GAGAAGATTGCCATTGTTGG+TGG | + | chr1_1:61147496-61147515 | Msa0033590:CDS | 45.0% | |
| GAAGATTGCCATTGTTGGTG+GGG | + | chr1_1:61147498-61147517 | Msa0033590:CDS | 45.0% | |
| ! | AAGATTGCCATTGTTGGTGG+GGG | + | chr1_1:61147499-61147518 | Msa0033590:CDS | 45.0% |
| AATGTAACCCCCACCAACAA+TGG | - | chr1_1:61147509-61147528 | None:intergenic | 45.0% | |
| TACATTGCCTTGGAGTTTGC+TGG | + | chr1_1:61147523-61147542 | Msa0033590:CDS | 45.0% | |
| GATGAAGAGGTAAGCAAGCA+TGG | + | chr1_1:61147613-61147632 | Msa0033590:intron | 45.0% | |
| CTACAGGAGATTCCTCAGTA+TGG | - | chr1_1:61147759-61147778 | None:intergenic | 45.0% | |
| ! | TGAGCCAACTAAGAAGCATG+TGG | - | chr1_1:61148357-61148376 | None:intergenic | 45.0% |
| TCAAGAACATGCAAGCCGTA+TGG | - | chr1_1:61148384-61148403 | None:intergenic | 45.0% | |
| ! | AGTGTTACTCCTATTCACCC+AGG | + | chr1_1:61148623-61148642 | Msa0033590:intron | 45.0% |
| TCTCCGATTGCCCAAATTGA+AGG | - | chr1_1:61148675-61148694 | None:intergenic | 45.0% | |
| CAATCGGAGATGCTACAAAC+AGG | + | chr1_1:61148685-61148704 | Msa0033590:CDS | 45.0% | |
| ! | TCTCACTCCAGTTGCTTTGA+TGG | + | chr1_1:61148713-61148732 | Msa0033590:CDS | 45.0% |
| ! | ACTCCAGTTGCTTTGATGGA+GGG | + | chr1_1:61148717-61148736 | Msa0033590:CDS | 45.0% |
| ! | AACTCCTCCAATTGGTGGTT+GGG | - | chr1_1:61149524-61149543 | None:intergenic | 45.0% |
| GCACAGGCTGTAGAACAATA+TGG | + | chr1_1:61149661-61149680 | Msa0033590:intron | 45.0% | |
| TTCTGGGTTTGCACATGTGT+GGG | + | chr1_1:61149791-61149810 | Msa0033590:CDS | 45.0% | |
| TGATGCTCCTGAAATTGTGC+AGG | + | chr1_1:61149816-61149835 | Msa0033590:CDS | 45.0% | |
| GCAGACTTTGATGCTACTGT+AGG | + | chr1_1:61149960-61149979 | Msa0033590:CDS | 45.0% | |
| GCTCTTTCGAATCTTCCTAG+TGG | - | chr1_1:61150030-61150049 | None:intergenic | 45.0% | |
| TCGAAAGAGCCTTGATTCAC+AGG | + | chr1_1:61150040-61150059 | Msa0033590:CDS | 45.0% | |
| AAGTAATCATGGCCTGCACA+GGG | - | chr1_1:61150251-61150270 | None:intergenic | 45.0% | |
| TGTGCAGGCCATGATTACTT+GGG | + | chr1_1:61150251-61150270 | Msa0033590:intron | 45.0% | |
| TAGACTTCTTCGTGAGGGAA+GGG | - | chr1_1:61150309-61150328 | None:intergenic | 45.0% | |
| AGAAACTTGCCGATGCCTTA+AGG | + | chr1_1:61150627-61150646 | Msa0033590:three_prime_UTR | 45.0% | |
| TAGGTTTAGGTGCTCTCTCT+TGG | + | chr1_1:61150757-61150776 | Msa0033590:intron | 45.0% | |
| TAGGAAAAGGGGAATTTGGG+GGG | + | chr1_1:61151160-61151179 | Msa0033590:intron | 45.0% | |
| GGAATTTGGGGGGTAGATTA+CGG | + | chr1_1:61151170-61151189 | Msa0033590:intron | 45.0% | |
| GAATTTGGGGGGTAGATTAC+GGG | + | chr1_1:61151171-61151190 | Msa0033590:intron | 45.0% | |
| GTAGATTACGGGTAACTGAG+AGG | + | chr1_1:61151182-61151201 | Msa0033590:intron | 45.0% | |
| !!! | CATTCCTGCCATTTTGGGTT+GGG | - | chr1_1:61151479-61151498 | None:intergenic | 45.0% |
| !!! | ACATTCCTGCCATTTTGGGT+TGG | - | chr1_1:61151480-61151499 | None:intergenic | 45.0% |
| TGTCTTGAAAGCTCAGTTGC+CGG | - | chr1_1:61151687-61151706 | None:intergenic | 45.0% | |
| GGGGTGAGCTCATTTGAAAA+GGG | + | chr1_1:61151721-61151740 | Msa0033590:three_prime_UTR | 45.0% | |
| GGGTGAGCTCATTTGAAAAG+GGG | + | chr1_1:61151722-61151741 | Msa0033590:three_prime_UTR | 45.0% | |
| GGTGAGCTCATTTGAAAAGG+GGG | + | chr1_1:61151723-61151742 | Msa0033590:three_prime_UTR | 45.0% | |
| GTGAGCTCATTTGAAAAGGG+GGG | + | chr1_1:61151724-61151743 | Msa0033590:three_prime_UTR | 45.0% | |
| CTCATTTGAAAAGGGGGGAA+TGG | + | chr1_1:61151729-61151748 | Msa0033590:three_prime_UTR | 45.0% | |
| ! | TACCCCATCCTATTTTGTGC+AGG | - | chr1_1:61151982-61152001 | None:intergenic | 45.0% |
| !! | AATAGTTTAAAAAAAAAAAA+TGG | - | chr1_1:61149098-61149117 | None:intergenic | 5.0% |
| !!! | TTTAATTTTATATCATTTTT+TGG | - | chr1_1:61151316-61151335 | None:intergenic | 5.0% |
| ! | GCCATTGCTGCTTGCTTCAT+TGG | - | chr1_1:61145052-61145071 | None:intergenic | 50.0% |
| GAAGGAGCGAGAAAATGGGA+AGG | - | chr1_1:61145140-61145159 | None:intergenic | 50.0% | |
| ! | GAGAGAAGGTGTGAGAGTGA+AGG | - | chr1_1:61145158-61145177 | None:intergenic | 50.0% |
| !! | AGGGTTTTGGTGGAGAGAGA+AGG | - | chr1_1:61145172-61145191 | None:intergenic | 50.0% |
| GGGAGGGGATTGAGAGATTA+GGG | - | chr1_1:61145191-61145210 | None:intergenic | 50.0% | |
| !! | TCGAAGTCATAGTGGATGGC+GGG | - | chr1_1:61145259-61145278 | None:intergenic | 50.0% |
| !! | GTCGAAGTCATAGTGGATGG+CGG | - | chr1_1:61145260-61145279 | None:intergenic | 50.0% |
| ! | GAGGTCGAAGTCATAGTGGA+TGG | - | chr1_1:61145263-61145282 | None:intergenic | 50.0% |
| GACTTCGACCTCTTCACCAT+CGG | + | chr1_1:61145271-61145290 | Msa0033590:CDS | 50.0% | |
| TGGAAGCAAAGCGTGAAGCA+CGG | - | chr1_1:61145315-61145334 | None:intergenic | 50.0% | |
| GGTGGTATCCGATGAGATAG+TGG | - | chr1_1:61145377-61145396 | None:intergenic | 50.0% | |
| ! | AGGAGTGGGTTTACTGAGTC+AGG | + | chr1_1:61146527-61146546 | Msa0033590:intron | 50.0% |
| GAAGCCGGTTATCCCGTATT+TGG | + | chr1_1:61146625-61146644 | Msa0033590:intron | 50.0% | |
| GTTAACCACGCCCAAATACG+TGG | + | chr1_1:61146816-61146835 | Msa0033590:intron | 50.0% | |
| !! | GTCAAGTTGATTGAAGGCCG+TGG | + | chr1_1:61147208-61147227 | Msa0033590:CDS | 50.0% |
| GTTGATTGAAGGCCGTGGAA+AGG | + | chr1_1:61147213-61147232 | Msa0033590:CDS | 50.0% | |
| ATTGAAGGCCGTGGAAAGGT+GGG | + | chr1_1:61147217-61147236 | Msa0033590:intron | 50.0% | |
| ! | CGACAAAAGCAGGTTTTGCG+AGG | + | chr1_1:61147586-61147605 | Msa0033590:CDS | 50.0% |
| GCTGCCTTAGTGATAGCTAC+AGG | - | chr1_1:61147775-61147794 | None:intergenic | 50.0% | |
| GCTATCACTAAGGCAGCTGA+TGG | + | chr1_1:61147778-61147797 | Msa0033590:CDS | 50.0% | |
| !! | AAAGACCAGCAAAGGTACCG+TGG | + | chr1_1:61147813-61147832 | Msa0033590:CDS | 50.0% |
| ACTCCAGTGTCCTTAAGGGT+TGG | + | chr1_1:61148319-61148338 | Msa0033590:intron | 50.0% | |
| TAGCCAACCCTTAAGGACAC+TGG | - | chr1_1:61148325-61148344 | None:intergenic | 50.0% | |
| ! | CACTCCAGTTGCTTTGATGG+AGG | + | chr1_1:61148716-61148735 | Msa0033590:CDS | 50.0% |
| ACTCCCTCCATCAAAGCAAC+TGG | - | chr1_1:61148723-61148742 | None:intergenic | 50.0% | |
| ! | AGTTGCTTTGATGGAGGGAG+TGG | + | chr1_1:61148722-61148741 | Msa0033590:CDS | 50.0% |
| TGACTTCAGTGACCAGTGTG+TGG | + | chr1_1:61148841-61148860 | Msa0033590:intron | 50.0% | |
| !! | TGTGTGATCAAGCTTGCTGC+CGG | + | chr1_1:61149275-61149294 | Msa0033590:intron | 50.0% |
| GCAGCAACTACAACAACCAC+CGG | - | chr1_1:61149297-61149316 | None:intergenic | 50.0% | |
| GTGTTCTCCCAACCACCAAT+TGG | + | chr1_1:61149514-61149533 | Msa0033590:CDS | 50.0% | |
| TTCTCCCAACCACCAATTGG+AGG | + | chr1_1:61149517-61149536 | Msa0033590:CDS | 50.0% | |
| ! | CAACTCCTCCAATTGGTGGT+TGG | - | chr1_1:61149525-61149544 | None:intergenic | 50.0% |
| CAACCACCAATTGGAGGAGT+TGG | + | chr1_1:61149523-61149542 | Msa0033590:CDS | 50.0% | |
| AGACCAACTCCTCCAATTGG+TGG | - | chr1_1:61149529-61149548 | None:intergenic | 50.0% | |
| GTGAGACCAACTCCTCCAAT+TGG | - | chr1_1:61149532-61149551 | None:intergenic | 50.0% | |
| AGGAGCAGGTGAATGACCTA+TGG | + | chr1_1:61149554-61149573 | Msa0033590:intron | 50.0% | |
| ! | CGATGGATTTAGCCTGCCAT+AGG | - | chr1_1:61149573-61149592 | None:intergenic | 50.0% |
| ! | GTTCTGGGTTTGCACATGTG+TGG | + | chr1_1:61149790-61149809 | Msa0033590:CDS | 50.0% |
| TCTGGGTTTGCACATGTGTG+GGG | + | chr1_1:61149792-61149811 | Msa0033590:CDS | 50.0% | |
| CTGAGGAGTTTGTCACCATG+AGG | + | chr1_1:61150000-61150019 | Msa0033590:CDS | 50.0% | |
| CAAGTAATCATGGCCTGCAC+AGG | - | chr1_1:61150252-61150271 | None:intergenic | 50.0% | |
| CTGTGCAGGCCATGATTACT+TGG | + | chr1_1:61150250-61150269 | Msa0033590:intron | 50.0% | |
| AGACTTCTTCGTGAGGGAAG+GGG | - | chr1_1:61150308-61150327 | None:intergenic | 50.0% | |
| CTAGACTTCTTCGTGAGGGA+AGG | - | chr1_1:61150310-61150329 | None:intergenic | 50.0% | |
| !! | AAGGCATCGGCAAGTTTCTC+TGG | - | chr1_1:61150626-61150645 | None:intergenic | 50.0% |
| CTTGCCGATGCCTTAAGGTA+AGG | + | chr1_1:61150632-61150651 | Msa0033590:intron | 50.0% | |
| AACTCCCAACCCAAAATGGC+AGG | + | chr1_1:61151472-61151491 | Msa0033590:intron | 50.0% | |
| ACGCCGGAAACATGTTGCAT+TGG | - | chr1_1:61151538-61151557 | None:intergenic | 50.0% | |
| CGGGGTGAGCTCATTTGAAA+AGG | + | chr1_1:61151720-61151739 | Msa0033590:three_prime_UTR | 50.0% | |
| GTTGGAGTTGAGACACAGCA+TGG | + | chr1_1:61151886-61151905 | Msa0033590:three_prime_UTR | 50.0% | |
| GGGGAGGGGATTGAGAGATT+AGG | - | chr1_1:61145192-61145211 | None:intergenic | 55.0% | |
| GTCCGCGCTGAATCGCAAAA+CGG | + | chr1_1:61145226-61145245 | Msa0033590:CDS | 55.0% | |
| !! | CGAAGTCATAGTGGATGGCG+GGG | - | chr1_1:61145258-61145277 | None:intergenic | 55.0% |
| ATCTCATCGGATACCACCGG+AGG | + | chr1_1:61145379-61145398 | Msa0033590:CDS | 55.0% | |
| GCTGAGTTGCAGAGGCTTAC+TGG | + | chr1_1:61147154-61147173 | Msa0033590:CDS | 55.0% | |
| GATTGAAGGCCGTGGAAAGG+TGG | + | chr1_1:61147216-61147235 | Msa0033590:intron | 55.0% | |
| TGGTGGGGGTTACATTGCCT+TGG | + | chr1_1:61147513-61147532 | Msa0033590:CDS | 55.0% | |
| !! | ACCAGCAAAGGTACCGTGGA+TGG | + | chr1_1:61147817-61147836 | Msa0033590:CDS | 55.0% |
| ACCATCCACGGTACCTTTGC+TGG | - | chr1_1:61147821-61147840 | None:intergenic | 55.0% | |
| ! | TGGAGGAGTTGGTCTCACAG+AGG | + | chr1_1:61149534-61149553 | Msa0033590:CDS | 55.0% |
| ! | AGTTGGTCTCACAGAGGAGC+AGG | + | chr1_1:61149540-61149559 | Msa0033590:CDS | 55.0% |
| GCAGGTGAATGACCTATGGC+AGG | + | chr1_1:61149558-61149577 | Msa0033590:intron | 55.0% | |
| CAAACTCCTCAGCTGCGGTT+GGG | - | chr1_1:61149992-61150011 | None:intergenic | 55.0% | |
| ACAAACTCCTCAGCTGCGGT+TGG | - | chr1_1:61149993-61150012 | None:intergenic | 55.0% | |
| GGTGACAAACTCCTCAGCTG+CGG | - | chr1_1:61149997-61150016 | None:intergenic | 55.0% | |
| TCACCATGAGGACTCCCACT+AGG | + | chr1_1:61150012-61150031 | Msa0033590:CDS | 55.0% | |
| CTTCCTAGTGGGAGTCCTCA+TGG | - | chr1_1:61150018-61150037 | None:intergenic | 55.0% | |
| GACTTCTTCGTGAGGGAAGG+GGG | - | chr1_1:61150307-61150326 | None:intergenic | 55.0% | |
| GCTCGCACGCACGCTACATT+TGG | - | chr1_1:61144907-61144926 | None:intergenic | 60.0% | |
| !! | CGCCGTTTTGCGATTCAGCG+CGG | - | chr1_1:61145231-61145250 | None:intergenic | 60.0% |
| !! | TACCAGCGCCGATGGTGAAG+AGG | - | chr1_1:61145282-61145301 | None:intergenic | 60.0% |
| !! | TTCACCATCGGCGCTGGTAG+TGG | + | chr1_1:61145283-61145302 | Msa0033590:CDS | 60.0% |
| ! | TCGGATACCACCGGAGGTGT+CGG | + | chr1_1:61145385-61145404 | Msa0033590:CDS | 60.0% |
| ! | TACGGGATAACCGGCTTCCC+TGG | - | chr1_1:61146623-61146642 | None:intergenic | 60.0% |
| !! | GTGATCAAGCTTGCTGCCGG+TGG | + | chr1_1:61149278-61149297 | Msa0033590:intron | 60.0% |
| GGTTGGGAGAACACAGCAGC+AGG | - | chr1_1:61149508-61149527 | None:intergenic | 60.0% | |
| CACTGAAGGCCACCCTCTCT+GGG | + | chr1_1:61149716-61149735 | Msa0033590:CDS | 60.0% | |
| CATTCACCCAACCGCAGCTG+AGG | + | chr1_1:61149983-61150002 | Msa0033590:CDS | 60.0% | |
| CGATTCAGCGCGGACAGCGA+AGG | - | chr1_1:61145221-61145240 | None:intergenic | 65.0% | |
| GACCTCTTCACCATCGGCGC+TGG | + | chr1_1:61145277-61145296 | Msa0033590:CDS | 65.0% | |
| !! | ACCATCGGCGCTGGTAGTGG+CGG | + | chr1_1:61145286-61145305 | Msa0033590:CDS | 65.0% |
| !! | GATACCACCGGAGGTGTCGG+CGG | + | chr1_1:61145388-61145407 | Msa0033590:CDS | 65.0% |
| TTACGTGCCGCCGACACCTC+CGG | - | chr1_1:61145398-61145417 | None:intergenic | 65.0% | |
| CCAGAGAGGGTGGCCTTCAG+TGG | - | chr1_1:61149718-61149737 | None:intergenic | 65.0% | |
| CCACTGAAGGCCACCCTCTC+TGG | + | chr1_1:61149715-61149734 | Msa0033590:CDS | 65.0% | |
| GTCTGGAAGCCCAGAGAGGG+TGG | - | chr1_1:61149728-61149747 | None:intergenic | 65.0% | |
| CCGGTCTGGAAGCCCAGAGA+GGG | - | chr1_1:61149731-61149750 | None:intergenic | 65.0% | |
| CCCTCTCTGGGCTTCCAGAC+CGG | + | chr1_1:61149728-61149747 | Msa0033590:CDS | 65.0% | |
| CCTCTCTGGGCTTCCAGACC+GGG | + | chr1_1:61149729-61149748 | Msa0033590:CDS | 65.0% | |
| TGAGGGAAGGGGGTGACAGC+AGG | - | chr1_1:61150297-61150316 | None:intergenic | 65.0% | |
| CAGCGCGGACAGCGAAGGTG+CGG | - | chr1_1:61145216-61145235 | None:intergenic | 70.0% | |
| ! | ACCGCCACTACCAGCGCCGA+TGG | - | chr1_1:61145290-61145309 | None:intergenic | 70.0% |
| CCCGGTCTGGAAGCCCAGAG+AGG | - | chr1_1:61149732-61149751 | None:intergenic | 70.0% | |
| ! | AGCGAAGGTGCGGCGGGGAG+GGG | - | chr1_1:61145206-61145225 | None:intergenic | 75.0% |
| ! | CAGCGAAGGTGCGGCGGGGA+GGG | - | chr1_1:61145207-61145226 | None:intergenic | 75.0% |
| ! | ACAGCGAAGGTGCGGCGGGG+AGG | - | chr1_1:61145208-61145227 | None:intergenic | 75.0% |
| ! | CGGACAGCGAAGGTGCGGCG+GGG | - | chr1_1:61145211-61145230 | None:intergenic | 75.0% |
| ! | GCGGACAGCGAAGGTGCGGC+GGG | - | chr1_1:61145212-61145231 | None:intergenic | 75.0% |
| ! | CGCGGACAGCGAAGGTGCGG+CGG | - | chr1_1:61145213-61145232 | None:intergenic | 75.0% |
| ! | CGTGCCGCCGACACCTCCGG+TGG | - | chr1_1:61145395-61145414 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 61144888 | 61152029 | 61144888 | ID=Msa0033590;Name=Msa0033590 |
| chr1_1 | mRNA | 61144888 | 61152029 | 61144888 | ID=Msa0033590-mRNA-1;Parent=Msa0033590;Name=Msa0033590-mRNA-1;_AED=0.08;_eAED=0.08;_QI=164|1|1|1|0.9|0.81|11|420|553 |
| chr1_1 | exon | 61144888 | 61145413 | 61144888 | ID=Msa0033590-mRNA-1:exon:19178;Parent=Msa0033590-mRNA-1 |
| chr1_1 | exon | 61147009 | 61147234 | 61147009 | ID=Msa0033590-mRNA-1:exon:19179;Parent=Msa0033590-mRNA-1 |
| chr1_1 | exon | 61147343 | 61147621 | 61147343 | ID=Msa0033590-mRNA-1:exon:19180;Parent=Msa0033590-mRNA-1 |
| chr1_1 | exon | 61147709 | 61147885 | 61147709 | ID=Msa0033590-mRNA-1:exon:19181;Parent=Msa0033590-mRNA-1 |
| chr1_1 | exon | 61148509 | 61148562 | 61148509 | ID=Msa0033590-mRNA-1:exon:19182;Parent=Msa0033590-mRNA-1 |
| chr1_1 | exon | 61148645 | 61148793 | 61148645 | ID=Msa0033590-mRNA-1:exon:19183;Parent=Msa0033590-mRNA-1 |
| chr1_1 | exon | 61149498 | 61149561 | 61149498 | ID=Msa0033590-mRNA-1:exon:19184;Parent=Msa0033590-mRNA-1 |
| chr1_1 | exon | 61149667 | 61149837 | 61149667 | ID=Msa0033590-mRNA-1:exon:19185;Parent=Msa0033590-mRNA-1 |
| chr1_1 | exon | 61149924 | 61150061 | 61149924 | ID=Msa0033590-mRNA-1:exon:19186;Parent=Msa0033590-mRNA-1 |
| chr1_1 | exon | 61150554 | 61150648 | 61150554 | ID=Msa0033590-mRNA-1:exon:19187;Parent=Msa0033590-mRNA-1 |
| chr1_1 | exon | 61151663 | 61152029 | 61151663 | ID=Msa0033590-mRNA-1:exon:19188;Parent=Msa0033590-mRNA-1 |
| chr1_1 | five_prime_UTR | 61144888 | 61145051 | 61144888 | ID=Msa0033590-mRNA-1:five_prime_utr;Parent=Msa0033590-mRNA-1 |
| chr1_1 | CDS | 61145052 | 61145413 | 61145052 | ID=Msa0033590-mRNA-1:cds;Parent=Msa0033590-mRNA-1 |
| chr1_1 | CDS | 61147009 | 61147234 | 61147009 | ID=Msa0033590-mRNA-1:cds;Parent=Msa0033590-mRNA-1 |
| chr1_1 | CDS | 61147343 | 61147621 | 61147343 | ID=Msa0033590-mRNA-1:cds;Parent=Msa0033590-mRNA-1 |
| chr1_1 | CDS | 61147709 | 61147885 | 61147709 | ID=Msa0033590-mRNA-1:cds;Parent=Msa0033590-mRNA-1 |
| chr1_1 | CDS | 61148509 | 61148562 | 61148509 | ID=Msa0033590-mRNA-1:cds;Parent=Msa0033590-mRNA-1 |
| chr1_1 | CDS | 61148645 | 61148793 | 61148645 | ID=Msa0033590-mRNA-1:cds;Parent=Msa0033590-mRNA-1 |
| chr1_1 | CDS | 61149498 | 61149561 | 61149498 | ID=Msa0033590-mRNA-1:cds;Parent=Msa0033590-mRNA-1 |
| chr1_1 | CDS | 61149667 | 61149837 | 61149667 | ID=Msa0033590-mRNA-1:cds;Parent=Msa0033590-mRNA-1 |
| chr1_1 | CDS | 61149924 | 61150061 | 61149924 | ID=Msa0033590-mRNA-1:cds;Parent=Msa0033590-mRNA-1 |
| chr1_1 | CDS | 61150554 | 61150595 | 61150554 | ID=Msa0033590-mRNA-1:cds;Parent=Msa0033590-mRNA-1 |
| chr1_1 | three_prime_UTR | 61150596 | 61150648 | 61150596 | ID=Msa0033590-mRNA-1:three_prime_utr;Parent=Msa0033590-mRNA-1 |
| chr1_1 | three_prime_UTR | 61151663 | 61152029 | 61151663 | ID=Msa0033590-mRNA-1:three_prime_utr;Parent=Msa0033590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
