Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0658650 | KEH20775.1 | 92.523 | 107 | 8 | 0 | 1 | 107 | 1 | 107 | 4.72e-68 | 209 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006700 | Msa0658650 | 0.807903 | 4.027324e-50 | -8.615850e-47 |
| Msa0006820 | Msa0658650 | 0.812905 | 3.350366e-51 | -8.615850e-47 |
| Msa0008850 | Msa0658650 | 0.850379 | 1.764452e-60 | -8.615850e-47 |
| Msa0038310 | Msa0658650 | 0.819459 | 1.148768e-52 | -8.615850e-47 |
| Msa0047470 | Msa0658650 | 0.821414 | 4.088996e-53 | -8.615850e-47 |
| Msa0050500 | Msa0658650 | 0.817062 | 4.006702e-52 | -8.615850e-47 |
| Msa0050730 | Msa0658650 | 0.800284 | 1.549201e-48 | -8.615850e-47 |
| Msa0055280 | Msa0658650 | 0.816797 | 4.594757e-52 | -8.615850e-47 |
| Msa0060600 | Msa0658650 | 0.822552 | 2.229153e-53 | -8.615850e-47 |
| Msa0064550 | Msa0658650 | 0.815095 | 1.101930e-51 | -8.615850e-47 |
| Msa0068410 | Msa0658650 | 0.810628 | 1.048822e-50 | -8.615850e-47 |
| Msa0074760 | Msa0658650 | 0.800283 | 1.550110e-48 | -8.615850e-47 |
| Msa0083160 | Msa0658650 | 0.809454 | 1.876985e-50 | -8.615850e-47 |
| Msa0086090 | Msa0658650 | 0.824411 | 8.188313e-54 | -8.615850e-47 |
| Msa0100910 | Msa0658650 | 0.800719 | 1.263224e-48 | -8.615850e-47 |
| Msa0101060 | Msa0658650 | 0.816258 | 6.067993e-52 | -8.615850e-47 |
| Msa0103060 | Msa0658650 | 0.805910 | 1.062338e-49 | -8.615850e-47 |
| Msa0105340 | Msa0658650 | 0.808843 | 2.537799e-50 | -8.615850e-47 |
| Msa0605230 | Msa0658650 | 0.812711 | 3.694525e-51 | -8.615850e-47 |
| Msa0606060 | Msa0658650 | 0.805019 | 1.633746e-49 | -8.615850e-47 |
| Msa0607280 | Msa0658650 | 0.805911 | 1.062132e-49 | -8.615850e-47 |
| Msa0610280 | Msa0658650 | 0.901237 | 3.284039e-78 | -8.615850e-47 |
| Msa0617830 | Msa0658650 | 0.841196 | 5.503184e-58 | -8.615850e-47 |
| Msa0618520 | Msa0658650 | 0.807270 | 5.487152e-50 | -8.615850e-47 |
| Msa0620640 | Msa0658650 | 0.817920 | 2.567312e-52 | -8.615850e-47 |
| Msa0620750 | Msa0658650 | 0.824674 | 7.102207e-54 | -8.615850e-47 |
| Msa0622340 | Msa0658650 | 0.807472 | 4.971591e-50 | -8.615850e-47 |
| Msa0646390 | Msa0658650 | 0.822092 | 2.850204e-53 | -8.615850e-47 |
| Msa0647000 | Msa0658650 | 0.800044 | 1.733732e-48 | -8.615850e-47 |
| Msa0653710 | Msa0658650 | 0.804574 | 2.023190e-49 | -8.615850e-47 |
| Msa0654060 | Msa0658650 | 0.805955 | 1.039526e-49 | -8.615850e-47 |
| Msa0656270 | Msa0658650 | 0.851562 | 8.184138e-61 | -8.615850e-47 |
| Msa0656680 | Msa0658650 | 0.840832 | 6.855143e-58 | -8.615850e-47 |
| Msa0658650 | Msa0660820 | 0.805080 | 1.586526e-49 | -8.615850e-47 |
| Msa0658650 | Msa0669200 | 0.823758 | 1.166004e-53 | -8.615850e-47 |
| Msa0658650 | Msa0676100 | 0.806226 | 9.116590e-50 | -8.615850e-47 |
| Msa0658650 | Msa0700070 | 0.851089 | 1.113657e-60 | -8.615850e-47 |
| Msa0658650 | Msa0703460 | 0.872621 | 2.763505e-67 | -8.615850e-47 |
| Msa0658650 | Msa0714340 | 0.838927 | 2.149719e-57 | -8.615850e-47 |
| Msa0658650 | Msa0714380 | 0.824114 | 9.615998e-54 | -8.615850e-47 |
| Msa0658650 | Msa0717150 | 0.807831 | 4.171117e-50 | -8.615850e-47 |
| Msa0658650 | Msa0724050 | 0.814883 | 1.228136e-51 | -8.615850e-47 |
| Msa0658650 | Msa0726610 | 0.821768 | 3.387546e-53 | -8.615850e-47 |
| Msa0658650 | Msa0732200 | 0.802395 | 5.726712e-49 | -8.615850e-47 |
| Msa0658650 | Msa0738860 | 0.802904 | 4.496896e-49 | -8.615850e-47 |
| Msa0658650 | Msa0738870 | 0.801415 | 9.103523e-49 | -8.615850e-47 |
| Msa0658650 | Msa0739570 | 0.803469 | 3.434999e-49 | -8.615850e-47 |
| Msa0658650 | Msa0739610 | 0.813453 | 2.539795e-51 | -8.615850e-47 |
| Msa0658650 | Msa0743640 | 0.817005 | 4.125561e-52 | -8.615850e-47 |
| Msa0658650 | Msa0750380 | 0.806656 | 7.399947e-50 | -8.615850e-47 |
| Msa0658650 | Msa0758220 | 0.806230 | 9.097716e-50 | -8.615850e-47 |
| Msa0658650 | Msa0763880 | 0.823676 | 1.218307e-53 | -8.615850e-47 |
| Msa0658650 | Msa0763910 | 0.818682 | 1.725293e-52 | -8.615850e-47 |
| Msa0658650 | Msa0771960 | 0.804695 | 1.909516e-49 | -8.615850e-47 |
| Msa0658650 | Msa0772150 | 0.803538 | 3.322845e-49 | -8.615850e-47 |
| Msa0658650 | Msa0773290 | 0.815293 | 9.959404e-52 | -8.615850e-47 |
| Msa0658650 | Msa0775260 | 0.810001 | 1.432004e-50 | -8.615850e-47 |
| Msa0658650 | Msa0782330 | 0.804926 | 1.708877e-49 | -8.615850e-47 |
| Msa0658650 | Msa0783270 | 0.820950 | 5.230602e-53 | -8.615850e-47 |
| Msa0658650 | Msa0787720 | 0.820410 | 6.961343e-53 | -8.615850e-47 |
| Msa0658650 | Msa0819360 | 0.811443 | 6.983586e-51 | -8.615850e-47 |
| Msa0658650 | Msa0824770 | 0.802940 | 4.419874e-49 | -8.615850e-47 |
| Msa0658650 | Msa0830720 | 0.820989 | 5.123252e-53 | -8.615850e-47 |
| Msa0658650 | Msa0844100 | 0.814469 | 1.516112e-51 | -8.615850e-47 |
| Msa0658650 | Msa0850740 | 0.812279 | 4.592077e-51 | -8.615850e-47 |
| Msa0658650 | Msa0853170 | 0.803389 | 3.568922e-49 | -8.615850e-47 |
| Msa0658650 | Msa0859520 | 0.820313 | 7.328864e-53 | -8.615850e-47 |
| Msa0658650 | Msa0859530 | 0.821261 | 4.436459e-53 | -8.615850e-47 |
| Msa0658650 | Msa0860270 | 0.800084 | 1.700861e-48 | -8.615850e-47 |
| Msa0658650 | Msa0863760 | 0.816971 | 4.200696e-52 | -8.615850e-47 |
| Msa0658650 | Msa0887070 | 0.806713 | 7.196806e-50 | -8.615850e-47 |
| Msa0658650 | Msa0899700 | 0.822948 | 1.802810e-53 | -8.615850e-47 |
| Msa0658650 | Msa0934830 | 0.812303 | 4.536853e-51 | -8.615850e-47 |
| Msa0658650 | Msa0950620 | 0.813916 | 2.008555e-51 | -8.615850e-47 |
| Msa0658650 | Msa0964680 | 0.832240 | 1.057960e-55 | -8.615850e-47 |
| Msa0658650 | Msa0971860 | 0.838448 | 2.857919e-57 | -8.615850e-47 |
| Msa0658650 | Msa0978000 | 0.805671 | 1.192784e-49 | -8.615850e-47 |
| Msa0658650 | Msa1043870 | 0.808402 | 3.152268e-50 | -8.615850e-47 |
| Msa0658650 | Msa1044040 | 0.802169 | 6.372051e-49 | -8.615850e-47 |
| Msa0658650 | Msa1055360 | 0.803974 | 2.698677e-49 | -8.615850e-47 |
| Msa0658650 | Msa1088440 | 0.825436 | 4.692829e-54 | -8.615850e-47 |
| Msa0658650 | Msa1102540 | 0.800656 | 1.301156e-48 | -8.615850e-47 |
| Msa0658650 | Msa1198450 | 0.852498 | 4.438768e-61 | -8.615850e-47 |
| Msa0658650 | Msa1218650 | 0.812413 | 4.293637e-51 | -8.615850e-47 |
| Msa0658650 | Msa1241820 | 0.816821 | 4.538502e-52 | -8.615850e-47 |
| Msa0658650 | Msa1282920 | 0.809811 | 1.573623e-50 | -8.615850e-47 |
| Msa0658650 | Msa1284030 | 0.807066 | 6.061569e-50 | -8.615850e-47 |
| Msa0658650 | Msa1292730 | 0.811948 | 5.422645e-51 | -8.615850e-47 |
| Msa0658650 | Msa1302780 | 0.815063 | 1.120184e-51 | -8.615850e-47 |
| Msa0658650 | Msa1306200 | 0.814203 | 1.736462e-51 | -8.615850e-47 |
| Msa0658650 | Msa1323060 | 0.823207 | 1.568608e-53 | -8.615850e-47 |
| Msa0658650 | Msa1335720 | 0.800283 | 1.549573e-48 | -8.615850e-47 |
| Msa0658650 | Msa1361190 | 0.811945 | 5.431587e-51 | -8.615850e-47 |
| Msa0658650 | Msa1365210 | 0.809825 | 1.562684e-50 | -8.615850e-47 |
| Msa0658650 | Msa1378470 | 0.807946 | 3.941566e-50 | -8.615850e-47 |
| Msa0658650 | Msa1415270 | 0.825063 | 5.748605e-54 | -8.615850e-47 |
| Msa0658650 | Msa1419110 | 0.806498 | 7.988300e-50 | -8.615850e-47 |
| Msa0658650 | Msa1421870 | 0.805052 | 1.608078e-49 | -8.615850e-47 |
| Msa0658650 | Msa1431730 | 0.830395 | 3.008152e-55 | -8.615850e-47 |
| Msa0658650 | Msa1435470 | 0.810735 | 9.942178e-51 | -8.615850e-47 |
| Msa0658650 | Msa1439230 | 0.811626 | 6.373587e-51 | -8.615850e-47 |
| Msa0658650 | Msa1440180 | 0.810132 | 1.341921e-50 | -8.615850e-47 |
| Msa0658650 | Msa1449740 | 0.811729 | 6.052313e-51 | -8.615850e-47 |
| Msa0658650 | Msa1450020 | 0.822838 | 1.911922e-53 | -8.615850e-47 |
| Msa0658650 | Msa1458920 | 0.811757 | 5.968876e-51 | -8.615850e-47 |
| Msa0132620 | Msa0658650 | 0.806257 | 8.979322e-50 | -8.615850e-47 |
| Msa0141670 | Msa0658650 | 0.800401 | 1.466435e-48 | -8.615850e-47 |
| Msa0151690 | Msa0658650 | 0.826633 | 2.437237e-54 | -8.615850e-47 |
| Msa0155610 | Msa0658650 | 0.850185 | 2.000097e-60 | -8.615850e-47 |
| Msa0164360 | Msa0658650 | 0.802733 | 4.877856e-49 | -8.615850e-47 |
| Msa0198440 | Msa0658650 | 0.822737 | 2.018786e-53 | -8.615850e-47 |
| Msa0200840 | Msa0658650 | 0.810811 | 9.575213e-51 | -8.615850e-47 |
| Msa0200870 | Msa0658650 | 0.809745 | 1.625897e-50 | -8.615850e-47 |
| Msa0203180 | Msa0658650 | 0.836985 | 6.786250e-57 | -8.615850e-47 |
| Msa0216210 | Msa0658650 | 0.825223 | 5.269319e-54 | -8.615850e-47 |
| Msa0401340 | Msa0658650 | 0.826314 | 2.904324e-54 | -8.615850e-47 |
| Msa0411000 | Msa0658650 | 0.803915 | 2.775937e-49 | -8.615850e-47 |
| Msa0418430 | Msa0658650 | 0.800960 | 1.127880e-48 | -8.615850e-47 |
| Msa0419620 | Msa0658650 | -0.813808 | 2.121721e-51 | -8.615850e-47 |
| Msa0421800 | Msa0658650 | 0.803964 | 2.710758e-49 | -8.615850e-47 |
| Msa0431830 | Msa0658650 | 0.805839 | 1.099686e-49 | -8.615850e-47 |
| Msa0448080 | Msa0658650 | 0.800511 | 1.392896e-48 | -8.615850e-47 |
| Msa0448120 | Msa0658650 | 0.815547 | 8.740546e-52 | -8.615850e-47 |
| Msa0467800 | Msa0658650 | 0.811570 | 6.554092e-51 | -8.615850e-47 |
| Msa0467880 | Msa0658650 | 0.813690 | 2.253421e-51 | -8.615850e-47 |
| Msa0243470 | Msa0658650 | 0.833060 | 6.622513e-56 | -8.615850e-47 |
| Msa0246300 | Msa0658650 | 0.821869 | 3.209496e-53 | -8.615850e-47 |
| Msa0252180 | Msa0658650 | 0.823359 | 1.445517e-53 | -8.615850e-47 |
| Msa0265580 | Msa0658650 | 0.805884 | 1.076158e-49 | -8.615850e-47 |
| Msa0278670 | Msa0658650 | 0.818728 | 1.684890e-52 | -8.615850e-47 |
| Msa0281940 | Msa0658650 | 0.835794 | 1.363282e-56 | -8.615850e-47 |
| Msa0282170 | Msa0658650 | 0.821277 | 4.397586e-53 | -8.615850e-47 |
| Msa0284870 | Msa0658650 | 0.859012 | 5.551727e-63 | -8.615850e-47 |
| Msa0292180 | Msa0658650 | 0.802795 | 4.734543e-49 | -8.615850e-47 |
| Msa0306130 | Msa0658650 | 0.800323 | 1.520864e-48 | -8.615850e-47 |
| Msa0318070 | Msa0658650 | 0.817443 | 3.288901e-52 | -8.615850e-47 |
| Msa0323630 | Msa0658650 | 0.807792 | 4.251979e-50 | -8.615850e-47 |
| Msa0354390 | Msa0658650 | 0.801928 | 7.142804e-49 | -8.615850e-47 |
| Msa0358290 | Msa0658650 | 0.800340 | 1.509122e-48 | -8.615850e-47 |
| Msa0514260 | Msa0658650 | 0.800133 | 1.662665e-48 | -8.615850e-47 |
| Msa0534420 | Msa0658650 | 0.811479 | 6.858173e-51 | -8.615850e-47 |
| Msa0538260 | Msa0658650 | 0.802185 | 6.324130e-49 | -8.615850e-47 |
| Msa0549740 | Msa0658650 | 0.838254 | 3.206661e-57 | -8.615850e-47 |
| Msa0566980 | Msa0658650 | 0.823505 | 1.335915e-53 | -8.615850e-47 |
| Msa0568610 | Msa0658650 | 0.805305 | 1.423218e-49 | -8.615850e-47 |
| Msa0576600 | Msa0658650 | 0.838077 | 3.561555e-57 | -8.615850e-47 |
| Msa0577230 | Msa0658650 | 0.819647 | 1.040547e-52 | -8.615850e-47 |
| Msa0593810 | Msa0658650 | 0.802347 | 5.857161e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0658650 | MtrunA17_Chr8g0381641 | 92.523 | 107 | 8 | 0 | 1 | 107 | 1 | 107 | 4.34e-72 | 209 |
| Msa0658650 | MtrunA17_Chr8g0381621 | 74.286 | 105 | 22 | 4 | 1 | 103 | 1 | 102 | 6.90e-49 | 150 |
| Msa0658650 | MtrunA17_Chr8g0381631 | 57.831 | 83 | 22 | 2 | 25 | 107 | 44 | 113 | 1.31e-21 | 82.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 26 sgRNAs with CRISPR-Local
Find 29 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTGTTGTGGTTTCGGTTT+TGG | 0.230297 | 4_3:-68852084 | None:intergenic |
| ACCCGTAATTGTTGTGGTTT+CGG | 0.263916 | 4_3:-68852090 | None:intergenic |
| AACCGAAACCACAACAATTA+CGG | 0.350207 | 4_3:+68852088 | Msa0658650:CDS |
| GATTGATCTTCCTCAACTAT+TGG | 0.360870 | 4_3:-68852196 | None:intergenic |
| CCTCATTGATGACATGAGTT+TGG | 0.382010 | 4_3:-68852368 | None:intergenic |
| ACCGAAACCACAACAATTAC+GGG | 0.390353 | 4_3:+68852089 | Msa0658650:CDS |
| AGATCAATCCTACTATTTAG+AGG | 0.394992 | 4_3:+68852210 | Msa0658650:CDS |
| TTACGAACCCACATACTATC+CGG | 0.475257 | 4_3:+68852132 | Msa0658650:CDS |
| ACGACGAACCTCTAAATAGT+AGG | 0.482372 | 4_3:-68852218 | None:intergenic |
| AGACCGATCGACGAGGTTTG+AGG | 0.483942 | 4_3:+68852254 | Msa0658650:CDS |
| TACGAACCCACATACTATCC+GGG | 0.510321 | 4_3:+68852133 | Msa0658650:CDS |
| GATCGACGAGGTTTGAGGTA+TGG | 0.517220 | 4_3:+68852259 | Msa0658650:CDS |
| GCGTCGTGTTGCAATATATG+AGG | 0.518107 | 4_3:+68852171 | Msa0658650:CDS |
| ATACCTCAAACCTCGTCGAT+CGG | 0.542925 | 4_3:-68852257 | None:intergenic |
| GTGATGCCCCGGATAGTATG+TGG | 0.565451 | 4_3:-68852140 | None:intergenic |
| TTATTCAACACGAGCATAGG+AGG | 0.567055 | 4_3:+68852335 | Msa0658650:CDS |
| CAAACTCATGTCATCAATGA+GGG | 0.571315 | 4_3:+68852369 | Msa0658650:CDS |
| GACTCCACCCGTAATTGTTG+TGG | 0.580902 | 4_3:-68852096 | None:intergenic |
| CCAAACTCATGTCATCAATG+AGG | 0.606593 | 4_3:+68852368 | Msa0658650:CDS |
| ATATGAGGAACCAATAGTTG+AGG | 0.635820 | 4_3:+68852186 | Msa0658650:CDS |
| TCAACACGAGCATAGGAGGA+CGG | 0.662040 | 4_3:+68852339 | Msa0658650:CDS |
| GAAACCACAACAATTACGGG+TGG | 0.673197 | 4_3:+68852092 | Msa0658650:CDS |
| ACGAACCCACATACTATCCG+GGG | 0.676259 | 4_3:+68852134 | Msa0658650:CDS |
| TGATGCCCCGGATAGTATGT+GGG | 0.689506 | 4_3:-68852139 | None:intergenic |
| GAGACTGAGACCGATCGACG+AGG | 0.700755 | 4_3:+68852247 | Msa0658650:CDS |
| AAGTGTTGATGAAGAAGCTG+AGG | 0.703686 | 4_3:+68852309 | Msa0658650:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AGATCAATCCTACTATTTAG+AGG | + | chr4_3:68852210-68852229 | Msa0658650:CDS | 30.0% | |
| ! | AATTGTTGTGGTTTCGGTTT+TGG | - | chr4_3:68852087-68852106 | None:intergenic | 35.0% |
| AACCGAAACCACAACAATTA+CGG | + | chr4_3:68852088-68852107 | Msa0658650:CDS | 35.0% | |
| ATATGAGGAACCAATAGTTG+AGG | + | chr4_3:68852186-68852205 | Msa0658650:CDS | 35.0% | |
| GATTGATCTTCCTCAACTAT+TGG | - | chr4_3:68852199-68852218 | None:intergenic | 35.0% | |
| ! | CTTTTATTCAACACGAGCAT+AGG | + | chr4_3:68852332-68852351 | Msa0658650:CDS | 35.0% |
| CAAACTCATGTCATCAATGA+GGG | + | chr4_3:68852369-68852388 | Msa0658650:CDS | 35.0% | |
| ACCGAAACCACAACAATTAC+GGG | + | chr4_3:68852089-68852108 | Msa0658650:CDS | 40.0% | |
| ACCCGTAATTGTTGTGGTTT+CGG | - | chr4_3:68852093-68852112 | None:intergenic | 40.0% | |
| TTACGAACCCACATACTATC+CGG | + | chr4_3:68852132-68852151 | Msa0658650:CDS | 40.0% | |
| ACGACGAACCTCTAAATAGT+AGG | - | chr4_3:68852221-68852240 | None:intergenic | 40.0% | |
| !! | AAGTGTTGATGAAGAAGCTG+AGG | + | chr4_3:68852309-68852328 | Msa0658650:CDS | 40.0% |
| TTATTCAACACGAGCATAGG+AGG | + | chr4_3:68852335-68852354 | Msa0658650:CDS | 40.0% | |
| ! | CCTCATTGATGACATGAGTT+TGG | - | chr4_3:68852371-68852390 | None:intergenic | 40.0% |
| CCAAACTCATGTCATCAATG+AGG | + | chr4_3:68852368-68852387 | Msa0658650:CDS | 40.0% | |
| GAAACCACAACAATTACGGG+TGG | + | chr4_3:68852092-68852111 | Msa0658650:CDS | 45.0% | |
| TACGAACCCACATACTATCC+GGG | + | chr4_3:68852133-68852152 | Msa0658650:CDS | 45.0% | |
| ! | TTGCAACACGACGCTTTTGA+TGG | - | chr4_3:68852165-68852184 | None:intergenic | 45.0% |
| GCGTCGTGTTGCAATATATG+AGG | + | chr4_3:68852171-68852190 | Msa0658650:CDS | 45.0% | |
| ATACCTCAAACCTCGTCGAT+CGG | - | chr4_3:68852260-68852279 | None:intergenic | 45.0% | |
| GACTCCACCCGTAATTGTTG+TGG | - | chr4_3:68852099-68852118 | None:intergenic | 50.0% | |
| ACGAACCCACATACTATCCG+GGG | + | chr4_3:68852134-68852153 | Msa0658650:CDS | 50.0% | |
| TGATGCCCCGGATAGTATGT+GGG | - | chr4_3:68852142-68852161 | None:intergenic | 50.0% | |
| ! | GATCGACGAGGTTTGAGGTA+TGG | + | chr4_3:68852259-68852278 | Msa0658650:CDS | 50.0% |
| TCAACACGAGCATAGGAGGA+CGG | + | chr4_3:68852339-68852358 | Msa0658650:CDS | 50.0% | |
| GTGATGCCCCGGATAGTATG+TGG | - | chr4_3:68852143-68852162 | None:intergenic | 55.0% | |
| !!! | CGCTTTTGATGGTGATGCCC+CGG | - | chr4_3:68852154-68852173 | None:intergenic | 55.0% |
| AGACCGATCGACGAGGTTTG+AGG | + | chr4_3:68852254-68852273 | Msa0658650:CDS | 55.0% | |
| GAGACTGAGACCGATCGACG+AGG | + | chr4_3:68852247-68852266 | Msa0658650:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 68852076 | 68852399 | 68852076 | ID=Msa0658650;Name=Msa0658650 |
| chr4_3 | mRNA | 68852076 | 68852399 | 68852076 | ID=Msa0658650-mRNA-1;Parent=Msa0658650;Name=Msa0658650-mRNA-1;_AED=0.34;_eAED=0.34;_QI=0|-1|0|1|-1|1|1|0|107 |
| chr4_3 | exon | 68852076 | 68852399 | 68852076 | ID=Msa0658650-mRNA-1:exon:20024;Parent=Msa0658650-mRNA-1 |
| chr4_3 | CDS | 68852076 | 68852399 | 68852076 | ID=Msa0658650-mRNA-1:cds;Parent=Msa0658650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
