Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1202150 | sp|P43557|FMP32_YEAST | 27.711 | 166 | 95 | 3 | 59 | 199 | 41 | 206 | 3.48e-13 | 68.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1202150 | G7LD03 | 80.913 | 241 | 5 | 3 | 1 | 200 | 1 | 241 | 3.55e-125 | 362 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004060 | Msa1202150 | 0.819189 | 1.323667e-52 | -8.615850e-47 |
| Msa0004540 | Msa1202150 | 0.816526 | 5.283433e-52 | -8.615850e-47 |
| Msa0005000 | Msa1202150 | -0.800983 | 1.115585e-48 | -8.615850e-47 |
| Msa0006880 | Msa1202150 | 0.839271 | 1.750721e-57 | -8.615850e-47 |
| Msa0008410 | Msa1202150 | 0.809816 | 1.569607e-50 | -8.615850e-47 |
| Msa0010020 | Msa1202150 | 0.803520 | 3.352641e-49 | -8.615850e-47 |
| Msa0015680 | Msa1202150 | 0.807202 | 5.670629e-50 | -8.615850e-47 |
| Msa0026660 | Msa1202150 | 0.801217 | 9.990807e-49 | -8.615850e-47 |
| Msa0029260 | Msa1202150 | 0.826754 | 2.280157e-54 | -8.615850e-47 |
| Msa0032260 | Msa1202150 | 0.808282 | 3.343424e-50 | -8.615850e-47 |
| Msa0033880 | Msa1202150 | 0.849165 | 3.851568e-60 | -8.615850e-47 |
| Msa0037160 | Msa1202150 | 0.804261 | 2.352130e-49 | -8.615850e-47 |
| Msa0048180 | Msa1202150 | 0.816521 | 5.297921e-52 | -8.615850e-47 |
| Msa0055150 | Msa1202150 | 0.837777 | 4.254338e-57 | -8.615850e-47 |
| Msa0057140 | Msa1202150 | 0.807396 | 5.158505e-50 | -8.615850e-47 |
| Msa0090030 | Msa1202150 | 0.822723 | 2.033831e-53 | -8.615850e-47 |
| Msa0092170 | Msa1202150 | 0.807906 | 4.021097e-50 | -8.615850e-47 |
| Msa0097950 | Msa1202150 | 0.818486 | 1.911726e-52 | -8.615850e-47 |
| Msa0097990 | Msa1202150 | 0.806054 | 9.911040e-50 | -8.615850e-47 |
| Msa0098390 | Msa1202150 | -0.802358 | 5.825761e-49 | -8.615850e-47 |
| Msa0100800 | Msa1202150 | 0.809768 | 1.607204e-50 | -8.615850e-47 |
| Msa0105520 | Msa1202150 | 0.832758 | 7.871990e-56 | -8.615850e-47 |
| Msa0108870 | Msa1202150 | 0.806831 | 6.795880e-50 | -8.615850e-47 |
| Msa0115370 | Msa1202150 | 0.824850 | 6.455052e-54 | -8.615850e-47 |
| Msa0606810 | Msa1202150 | 0.808622 | 2.829183e-50 | -8.615850e-47 |
| Msa0610390 | Msa1202150 | 0.813957 | 1.967541e-51 | -8.615850e-47 |
| Msa0610500 | Msa1202150 | 0.802715 | 4.918902e-49 | -8.615850e-47 |
| Msa0626680 | Msa1202150 | 0.811878 | 5.616714e-51 | -8.615850e-47 |
| Msa0628290 | Msa1202150 | 0.818297 | 2.109431e-52 | -8.615850e-47 |
| Msa0641140 | Msa1202150 | 0.800076 | 1.707311e-48 | -8.615850e-47 |
| Msa0647930 | Msa1202150 | 0.830856 | 2.319590e-55 | -8.615850e-47 |
| Msa0647950 | Msa1202150 | 0.827349 | 1.643433e-54 | -8.615850e-47 |
| Msa0650920 | Msa1202150 | 0.802654 | 5.063733e-49 | -8.615850e-47 |
| Msa0651150 | Msa1202150 | 0.812151 | 4.897898e-51 | -8.615850e-47 |
| Msa0652300 | Msa1202150 | 0.842292 | 2.826241e-58 | -8.615850e-47 |
| Msa0652760 | Msa1202150 | 0.803378 | 3.587839e-49 | -8.615850e-47 |
| Msa0662630 | Msa1202150 | 0.807158 | 5.795974e-50 | -8.615850e-47 |
| Msa0664760 | Msa1202150 | 0.826535 | 2.571753e-54 | -8.615850e-47 |
| Msa0666230 | Msa1202150 | 0.826261 | 2.989935e-54 | -8.615850e-47 |
| Msa0689500 | Msa1202150 | 0.800867 | 1.178073e-48 | -8.615850e-47 |
| Msa0692940 | Msa1202150 | 0.801362 | 9.331505e-49 | -8.615850e-47 |
| Msa0694840 | Msa1202150 | 0.811986 | 5.320825e-51 | -8.615850e-47 |
| Msa0707390 | Msa1202150 | 0.804097 | 2.544432e-49 | -8.615850e-47 |
| Msa0714920 | Msa1202150 | 0.800258 | 1.568337e-48 | -8.615850e-47 |
| Msa0744100 | Msa1202150 | 0.809410 | 1.918322e-50 | -8.615850e-47 |
| Msa0756930 | Msa1202150 | 0.840981 | 6.265397e-58 | -8.615850e-47 |
| Msa0805500 | Msa1202150 | 0.802286 | 6.030350e-49 | -8.615850e-47 |
| Msa0818630 | Msa1202150 | 0.800292 | 1.543075e-48 | -8.615850e-47 |
| Msa0818770 | Msa1202150 | 0.802031 | 6.803504e-49 | -8.615850e-47 |
| Msa0819060 | Msa1202150 | 0.817136 | 3.856173e-52 | -8.615850e-47 |
| Msa0820250 | Msa1202150 | 0.806514 | 7.926466e-50 | -8.615850e-47 |
| Msa0825270 | Msa1202150 | 0.817041 | 4.049742e-52 | -8.615850e-47 |
| Msa0826500 | Msa1202150 | 0.817166 | 3.796924e-52 | -8.615850e-47 |
| Msa0827280 | Msa1202150 | 0.813604 | 2.352930e-51 | -8.615850e-47 |
| Msa0828680 | Msa1202150 | 0.810705 | 1.009296e-50 | -8.615850e-47 |
| Msa0830390 | Msa1202150 | 0.815756 | 7.854355e-52 | -8.615850e-47 |
| Msa0836500 | Msa1202150 | 0.843590 | 1.276437e-58 | -8.615850e-47 |
| Msa0127040 | Msa1202150 | 0.817713 | 2.859547e-52 | -8.615850e-47 |
| Msa0127850 | Msa1202150 | 0.858723 | 6.771531e-63 | -8.615850e-47 |
| Msa0131450 | Msa1202150 | 0.804809 | 1.807134e-49 | -8.615850e-47 |
| Msa0140300 | Msa1202150 | 0.844238 | 8.554872e-59 | -8.615850e-47 |
| Msa0165440 | Msa1202150 | 0.812153 | 4.891706e-51 | -8.615850e-47 |
| Msa0166750 | Msa1202150 | 0.816225 | 6.170649e-52 | -8.615850e-47 |
| Msa0169300 | Msa1202150 | 0.823602 | 1.268093e-53 | -8.615850e-47 |
| Msa0174000 | Msa1202150 | 0.842485 | 2.512628e-58 | -8.615850e-47 |
| Msa0177210 | Msa1202150 | 0.810929 | 9.026261e-51 | -8.615850e-47 |
| Msa0182280 | Msa1202150 | 0.811109 | 8.252206e-51 | -8.615850e-47 |
| Msa0193600 | Msa1202150 | 0.810372 | 1.190825e-50 | -8.615850e-47 |
| Msa0198530 | Msa1202150 | 0.802233 | 6.183944e-49 | -8.615850e-47 |
| Msa0227400 | Msa1202150 | 0.806655 | 7.400936e-50 | -8.615850e-47 |
| Msa0231880 | Msa1202150 | 0.800153 | 1.647049e-48 | -8.615850e-47 |
| Msa0381000 | Msa1202150 | 0.801428 | 9.047679e-49 | -8.615850e-47 |
| Msa0381700 | Msa1202150 | 0.805139 | 1.541684e-49 | -8.615850e-47 |
| Msa0384670 | Msa1202150 | 0.803510 | 3.368824e-49 | -8.615850e-47 |
| Msa0384880 | Msa1202150 | 0.803285 | 3.749104e-49 | -8.615850e-47 |
| Msa0405650 | Msa1202150 | 0.823298 | 1.493741e-53 | -8.615850e-47 |
| Msa0410300 | Msa1202150 | 0.808277 | 3.351686e-50 | -8.615850e-47 |
| Msa0413730 | Msa1202150 | 0.819262 | 1.273541e-52 | -8.615850e-47 |
| Msa0436200 | Msa1202150 | 0.852765 | 3.724598e-61 | -8.615850e-47 |
| Msa0439230 | Msa1202150 | 0.812625 | 3.857878e-51 | -8.615850e-47 |
| Msa0458780 | Msa1202150 | 0.806819 | 6.836446e-50 | -8.615850e-47 |
| Msa0461590 | Msa1202150 | 0.825096 | 5.646419e-54 | -8.615850e-47 |
| Msa0474700 | Msa1202150 | 0.816982 | 4.175651e-52 | -8.615850e-47 |
| Msa0478580 | Msa1202150 | 0.808725 | 2.689861e-50 | -8.615850e-47 |
| Msa0980940 | Msa1202150 | 0.837123 | 6.256332e-57 | -8.615850e-47 |
| Msa0981430 | Msa1202150 | 0.816623 | 5.026331e-52 | -8.615850e-47 |
| Msa0997430 | Msa1202150 | 0.809564 | 1.778008e-50 | -8.615850e-47 |
| Msa1001350 | Msa1202150 | 0.826613 | 2.463841e-54 | -8.615850e-47 |
| Msa1006840 | Msa1202150 | 0.808165 | 3.541896e-50 | -8.615850e-47 |
| Msa1025260 | Msa1202150 | 0.802741 | 4.857460e-49 | -8.615850e-47 |
| Msa1025940 | Msa1202150 | 0.809630 | 1.720493e-50 | -8.615850e-47 |
| Msa1028290 | Msa1202150 | 0.808516 | 2.980613e-50 | -8.615850e-47 |
| Msa1040840 | Msa1202150 | 0.823517 | 1.327070e-53 | -8.615850e-47 |
| Msa1041520 | Msa1202150 | 0.809733 | 1.635015e-50 | -8.615850e-47 |
| Msa1055010 | Msa1202150 | 0.801075 | 1.068513e-48 | -8.615850e-47 |
| Msa1055410 | Msa1202150 | 0.804261 | 2.351548e-49 | -8.615850e-47 |
| Msa1081560 | Msa1202150 | 0.821880 | 3.190513e-53 | -8.615850e-47 |
| Msa1089840 | Msa1202150 | 0.815244 | 1.020960e-51 | -8.615850e-47 |
| Msa1093330 | Msa1202150 | 0.836004 | 1.206466e-56 | -8.615850e-47 |
| Msa0239450 | Msa1202150 | 0.829315 | 5.514655e-55 | -8.615850e-47 |
| Msa0239940 | Msa1202150 | 0.811631 | 6.357531e-51 | -8.615850e-47 |
| Msa0262480 | Msa1202150 | 0.818744 | 1.670531e-52 | -8.615850e-47 |
| Msa0267870 | Msa1202150 | 0.808957 | 2.399316e-50 | -8.615850e-47 |
| Msa0273650 | Msa1202150 | 0.812452 | 4.210125e-51 | -8.615850e-47 |
| Msa0291520 | Msa1202150 | 0.820113 | 8.141742e-53 | -8.615850e-47 |
| Msa0295590 | Msa1202150 | 0.805903 | 1.066178e-49 | -8.615850e-47 |
| Msa0300350 | Msa1202150 | 0.812229 | 4.709489e-51 | -8.615850e-47 |
| Msa0304660 | Msa1202150 | 0.802468 | 5.530673e-49 | -8.615850e-47 |
| Msa0308200 | Msa1202150 | 0.802301 | 5.988016e-49 | -8.615850e-47 |
| Msa0308220 | Msa1202150 | 0.812014 | 5.247359e-51 | -8.615850e-47 |
| Msa0313930 | Msa1202150 | 0.802783 | 4.762438e-49 | -8.615850e-47 |
| Msa0320610 | Msa1202150 | 0.812459 | 4.194148e-51 | -8.615850e-47 |
| Msa0331700 | Msa1202150 | 0.801301 | 9.606998e-49 | -8.615850e-47 |
| Msa0343190 | Msa1202150 | 0.846471 | 2.127097e-59 | -8.615850e-47 |
| Msa0358670 | Msa1202150 | 0.805588 | 1.241349e-49 | -8.615850e-47 |
| Msa1109350 | Msa1202150 | 0.805325 | 1.410025e-49 | -8.615850e-47 |
| Msa1112390 | Msa1202150 | 0.808241 | 3.410880e-50 | -8.615850e-47 |
| Msa1127130 | Msa1202150 | 0.817014 | 4.106320e-52 | -8.615850e-47 |
| Msa1133400 | Msa1202150 | 0.830598 | 2.683292e-55 | -8.615850e-47 |
| Msa1158230 | Msa1202150 | 0.817627 | 2.989599e-52 | -8.615850e-47 |
| Msa1158770 | Msa1202150 | 0.806860 | 6.700596e-50 | -8.615850e-47 |
| Msa1160360 | Msa1202150 | 0.805541 | 1.270024e-49 | -8.615850e-47 |
| Msa1166410 | Msa1202150 | 0.808061 | 3.726322e-50 | -8.615850e-47 |
| Msa1166870 | Msa1202150 | 0.800713 | 1.266449e-48 | -8.615850e-47 |
| Msa1174100 | Msa1202150 | 0.815141 | 1.076099e-51 | -8.615850e-47 |
| Msa1179980 | Msa1202150 | 0.811861 | 5.665258e-51 | -8.615850e-47 |
| Msa1184370 | Msa1202150 | 0.812761 | 3.603722e-51 | -8.615850e-47 |
| Msa1201830 | Msa1202150 | 0.858651 | 7.118868e-63 | -8.615850e-47 |
| Msa1202150 | Msa1202580 | 0.825057 | 5.769460e-54 | -8.615850e-47 |
| Msa1202150 | Msa1204250 | 0.803546 | 3.310188e-49 | -8.615850e-47 |
| Msa1202150 | Msa1207730 | 0.829760 | 4.299085e-55 | -8.615850e-47 |
| Msa1202150 | Msa1226610 | 0.817208 | 3.714827e-52 | -8.615850e-47 |
| Msa1202150 | Msa1227690 | 0.817551 | 3.109195e-52 | -8.615850e-47 |
| Msa1202150 | Msa1237940 | 0.807515 | 4.868248e-50 | -8.615850e-47 |
| Msa1202150 | Msa1254710 | 0.816982 | 4.175977e-52 | -8.615850e-47 |
| Msa1202150 | Msa1269300 | 0.807549 | 4.788422e-50 | -8.615850e-47 |
| Msa1202150 | Msa1270620 | 0.806461 | 8.136244e-50 | -8.615850e-47 |
| Msa1202150 | Msa1270690 | 0.811584 | 6.507584e-51 | -8.615850e-47 |
| Msa1202150 | Msa1280620 | 0.803283 | 3.754053e-49 | -8.615850e-47 |
| Msa1202150 | Msa1293480 | -0.800603 | 1.333960e-48 | -8.615850e-47 |
| Msa1202150 | Msa1294840 | 0.842400 | 2.647089e-58 | -8.615850e-47 |
| Msa1202150 | Msa1294960 | 0.900919 | 4.519914e-78 | -8.615850e-47 |
| Msa1202150 | Msa1295110 | 0.821368 | 4.191322e-53 | -8.615850e-47 |
| Msa1202150 | Msa1306990 | 0.808992 | 2.357976e-50 | -8.615850e-47 |
| Msa1202150 | Msa1330270 | 0.811207 | 7.855760e-51 | -8.615850e-47 |
| Msa1202150 | Msa1333110 | 0.803002 | 4.290972e-49 | -8.615850e-47 |
| Msa1202150 | Msa1340830 | 0.818549 | 1.849901e-52 | -8.615850e-47 |
| Msa1202150 | Msa1355700 | 0.825486 | 4.565922e-54 | -8.615850e-47 |
| Msa1202150 | Msa1362420 | 0.804262 | 2.350996e-49 | -8.615850e-47 |
| Msa1202150 | Msa1365860 | 0.825689 | 4.087994e-54 | -8.615850e-47 |
| Msa1202150 | Msa1369890 | 0.805007 | 1.643092e-49 | -8.615850e-47 |
| Msa1202150 | Msa1371090 | 0.803239 | 3.833321e-49 | -8.615850e-47 |
| Msa1202150 | Msa1376200 | 0.800413 | 1.458306e-48 | -8.615850e-47 |
| Msa1202150 | Msa1383350 | 0.812199 | 4.781557e-51 | -8.615850e-47 |
| Msa1202150 | Msa1424780 | 0.800570 | 1.354866e-48 | -8.615850e-47 |
| Msa1202150 | Msa1426920 | 0.814997 | 1.158308e-51 | -8.615850e-47 |
| Msa1202150 | Msa1432480 | 0.807115 | 5.916084e-50 | -8.615850e-47 |
| Msa1202150 | Msa1444310 | 0.812660 | 3.790720e-51 | -8.615850e-47 |
| Msa1202150 | Msa1450280 | 0.804340 | 2.263885e-49 | -8.615850e-47 |
| Msa1202150 | Msa1452480 | 0.817613 | 3.011180e-52 | -8.615850e-47 |
| Msa1202150 | Msa1461280 | 0.800707 | 1.270201e-48 | -8.615850e-47 |
| Msa1202150 | Msa1466090 | 0.814638 | 1.391107e-51 | -8.615850e-47 |
| Msa0484290 | Msa1202150 | 0.800932 | 1.143018e-48 | -8.615850e-47 |
| Msa0484740 | Msa1202150 | 0.803214 | 3.879619e-49 | -8.615850e-47 |
| Msa0505380 | Msa1202150 | 0.819315 | 1.238651e-52 | -8.615850e-47 |
| Msa0524590 | Msa1202150 | 0.839587 | 1.449386e-57 | -8.615850e-47 |
| Msa0550540 | Msa1202150 | 0.803486 | 3.407527e-49 | -8.615850e-47 |
| Msa0550570 | Msa1202150 | 0.830343 | 3.097308e-55 | -8.615850e-47 |
| Msa0556790 | Msa1202150 | 0.813435 | 2.562854e-51 | -8.615850e-47 |
| Msa0556860 | Msa1202150 | 0.806362 | 8.533689e-50 | -8.615850e-47 |
| Msa0562940 | Msa1202150 | 0.819991 | 8.683522e-53 | -8.615850e-47 |
| Msa0578090 | Msa1202150 | 0.825937 | 3.569114e-54 | -8.615850e-47 |
| Msa0581070 | Msa1202150 | 0.803162 | 3.975784e-49 | -8.615850e-47 |
| Msa0586850 | Msa1202150 | 0.830680 | 2.562894e-55 | -8.615850e-47 |
| Msa0600600 | Msa1202150 | 0.811993 | 5.301135e-51 | -8.615850e-47 |
| Msa0850710 | Msa1202150 | 0.840597 | 7.901414e-58 | -8.615850e-47 |
| Msa0879850 | Msa1202150 | 0.844865 | 5.799720e-59 | -8.615850e-47 |
| Msa0879860 | Msa1202150 | 0.810913 | 9.100243e-51 | -8.615850e-47 |
| Msa0888940 | Msa1202150 | 0.834713 | 2.556467e-56 | -8.615850e-47 |
| Msa0897900 | Msa1202150 | 0.801151 | 1.030808e-48 | -8.615850e-47 |
| Msa0899350 | Msa1202150 | 0.816747 | 4.714126e-52 | -8.615850e-47 |
| Msa0901450 | Msa1202150 | 0.814805 | 1.277435e-51 | -8.615850e-47 |
| Msa0943170 | Msa1202150 | 0.804008 | 2.654156e-49 | -8.615850e-47 |
| Msa0944660 | Msa1202150 | 0.824044 | 9.989646e-54 | -8.615850e-47 |
| Msa0947530 | Msa1202150 | -0.809995 | 1.436482e-50 | -8.615850e-47 |
| Msa0959910 | Msa1202150 | 0.803699 | 3.078146e-49 | -8.615850e-47 |
| Msa0963020 | Msa1202150 | 0.803700 | 3.075922e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1202150 | MtrunA17_Chr8g0372241 | 80.913 | 241 | 5 | 3 | 1 | 200 | 1 | 241 | 6.84e-129 | 362 |
| Msa1202150 | MtrunA17_Chr5g0405011 | 62.869 | 237 | 47 | 7 | 1 | 200 | 1 | 233 | 7.81e-87 | 255 |
| Msa1202150 | MtrunA17_Chr3g0145131 | 69.006 | 171 | 28 | 2 | 55 | 200 | 56 | 226 | 2.49e-75 | 226 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1202150 | AT2G16460.1 | 68.041 | 194 | 31 | 5 | 38 | 200 | 37 | 230 | 3.71e-80 | 239 |
| Msa1202150 | AT3G51090.1 | 70.175 | 171 | 26 | 2 | 55 | 200 | 128 | 298 | 6.49e-74 | 225 |
| Msa1202150 | AT2G16460.2 | 69.118 | 136 | 28 | 4 | 38 | 159 | 37 | 172 | 3.62e-55 | 173 |
| Msa1202150 | AT3G51090.2 | 72.727 | 110 | 22 | 1 | 55 | 156 | 128 | 237 | 1.15e-47 | 157 |
| Msa1202150 | AT2G35090.1 | 31.507 | 146 | 79 | 3 | 55 | 200 | 33 | 157 | 1.33e-14 | 68.6 |
Find 52 sgRNAs with CRISPR-Local
Find 281 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCACTTCTGATTTGAATT+TGG | 0.134443 | 8_1:+55669668 | None:intergenic |
| TTATCTGGATTAAGAGAATT+AGG | 0.165634 | 8_1:-55670597 | Msa1202150:CDS |
| AAAGATCAAGAGTAGCTATT+TGG | 0.271903 | 8_1:-55666722 | Msa1202150:three_prime_UTR |
| AGACATATGCGACAATTATC+TGG | 0.294556 | 8_1:-55670612 | Msa1202150:CDS |
| TTGTAGGTTAGGAGATTAGA+AGG | 0.299979 | 8_1:-55670237 | Msa1202150:intron |
| CTCCGCATCTTGATGTAAAC+AGG | 0.312050 | 8_1:-55666785 | Msa1202150:exon |
| AAGGCCCAACTTTGCCTAAT+GGG | 0.340803 | 8_1:+55666625 | None:intergenic |
| ATAGCCTCAGCTTGCTTTGA+AGG | 0.349560 | 8_1:+55670204 | None:intergenic |
| AAAGGCCCAACTTTGCCTAA+TGG | 0.367455 | 8_1:+55666624 | None:intergenic |
| TGAAAATGTTTCTCAAGCTT+TGG | 0.367856 | 8_1:-55670145 | Msa1202150:intron |
| GATAAACACACGCATCTTAG+AGG | 0.372389 | 8_1:-55666513 | Msa1202150:three_prime_UTR |
| TATCTGGATTAAGAGAATTA+GGG | 0.388579 | 8_1:-55670596 | Msa1202150:CDS |
| TCATTCTTTAAGAGCACAAC+TGG | 0.394272 | 8_1:-55666882 | Msa1202150:CDS |
| AGCTCCCCATTAGGCAAAGT+TGG | 0.401817 | 8_1:-55666630 | Msa1202150:three_prime_UTR |
| CTTGTTTCAATCTCTGCCGT+TGG | 0.410054 | 8_1:-55666818 | Msa1202150:CDS |
| GAAGCTGAAGATGAAAAGTA+TGG | 0.427725 | 8_1:+55670516 | None:intergenic |
| TTGTTTCAATCTCTGCCGTT+GGG | 0.441684 | 8_1:-55666817 | Msa1202150:CDS |
| TGATTTGAATTTGGACAGGT+TGG | 0.450293 | 8_1:+55669677 | None:intergenic |
| CTTGATGTAAACAGGGTGTC+TGG | 0.457391 | 8_1:-55666777 | Msa1202150:exon |
| GATTGGATTTGAACCTTGAA+AGG | 0.467374 | 8_1:-55667608 | Msa1202150:CDS |
| ACTGAAGTAGATAATAATCC+AGG | 0.487623 | 8_1:+55666490 | None:intergenic |
| CTTCTGATTTGAATTTGGAC+AGG | 0.492497 | 8_1:+55669673 | None:intergenic |
| AGTCACTGCTGGACAGCGAT+TGG | 0.496124 | 8_1:-55667625 | Msa1202150:CDS |
| GCTCCCCATTAGGCAAAGTT+GGG | 0.515395 | 8_1:-55666629 | Msa1202150:three_prime_UTR |
| ATTGGATTTGAACCTTGAAA+GGG | 0.519704 | 8_1:-55667607 | Msa1202150:CDS |
| GTATTCATTCGCCATGCTTG+TGG | 0.526111 | 8_1:-55666562 | Msa1202150:three_prime_UTR |
| AGAAGATGCGTAGTGAATTG+AGG | 0.526242 | 8_1:-55667762 | Msa1202150:intron |
| AACATGAAACTGAAAAGCTT+AGG | 0.532342 | 8_1:-55667795 | Msa1202150:CDS |
| GAGATGGACAAAGTCACTGC+TGG | 0.542109 | 8_1:-55667636 | Msa1202150:CDS |
| TGTAGGTTAGGAGATTAGAA+GGG | 0.552033 | 8_1:-55670236 | Msa1202150:intron |
| GAAGGAACTAGCTCCCCATT+AGG | 0.556088 | 8_1:-55666639 | Msa1202150:three_prime_UTR |
| GTTAGGAGATTAGAAGGGCA+AGG | 0.559208 | 8_1:-55670231 | Msa1202150:CDS |
| ACACACGCATCTTAGAGGCC+TGG | 0.560712 | 8_1:-55666508 | Msa1202150:three_prime_UTR |
| AGGCCCAACTTTGCCTAATG+GGG | 0.580770 | 8_1:+55666626 | None:intergenic |
| TACATAACTAGTGGAGCTGA+AGG | 0.590124 | 8_1:-55666657 | Msa1202150:three_prime_UTR |
| ATTTGAAGCGAAGACGATGA+TGG | 0.595196 | 8_1:+55670558 | None:intergenic |
| GAGGTCATAAAATACTGCAT+AGG | 0.596780 | 8_1:-55666845 | Msa1202150:CDS |
| ACTGGAAGCAGCTAAATATG+AGG | 0.606726 | 8_1:-55666864 | Msa1202150:CDS |
| GCGGAGAACAGCAAGCCCAA+CGG | 0.607012 | 8_1:+55666802 | None:intergenic |
| ATCAGAAGTGCAGAGCTCAC+AGG | 0.616312 | 8_1:-55669658 | Msa1202150:intron |
| GTGCAAATATGCCACAAGCA+TGG | 0.622828 | 8_1:+55666551 | None:intergenic |
| AATTTACAGTACATAACTAG+TGG | 0.623466 | 8_1:-55666666 | Msa1202150:three_prime_UTR |
| TGGATTTGAACCTTGAAAGG+GGG | 0.629254 | 8_1:-55667605 | Msa1202150:intron |
| TTGGATTTGAACCTTGAAAG+GGG | 0.640554 | 8_1:-55667606 | Msa1202150:CDS |
| TCGCATATGTCTACAAATCG+CGG | 0.653170 | 8_1:+55670623 | None:intergenic |
| TCAGTTAACATTATAAAACC+AGG | 0.664965 | 8_1:-55666750 | Msa1202150:three_prime_UTR |
| ATGGCGAATGAATACACGAA+AGG | 0.669117 | 8_1:+55666570 | None:intergenic |
| AGTGCCTTCAAAGCAAGCTG+AGG | 0.676880 | 8_1:-55670208 | Msa1202150:CDS |
| ACCCTGTTTACATCAAGATG+CGG | 0.680795 | 8_1:+55666783 | None:intergenic |
| TCCGCATCTTGATGTAAACA+GGG | 0.681732 | 8_1:-55666784 | Msa1202150:exon |
| GTTAACATTATAAAACCAGG+TGG | 0.687516 | 8_1:-55666747 | Msa1202150:three_prime_UTR |
| TTTGTGATACAGGTATGAGA+TGG | 0.695301 | 8_1:-55667652 | Msa1202150:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTATAATTGCAATATATT+TGG | + | chr8_1:55666739-55666758 | None:intergenic | 15.0% |
| !! | ACTAAAAAAAACATCATATT+TGG | + | chr8_1:55666973-55666992 | None:intergenic | 15.0% |
| !! | TTAATTAATTATGACTTATG+AGG | - | chr8_1:55667424-55667443 | Msa1202150:intron | 15.0% |
| !! | AAATTTAAAAACCATATTGA+TGG | + | chr8_1:55667604-55667623 | None:intergenic | 15.0% |
| !! | TATTGTTTGCATTTATATAT+TGG | - | chr8_1:55667659-55667678 | Msa1202150:intron | 15.0% |
| !!! | AAAACAAAATTTCTTTTTGT+GGG | + | chr8_1:55667781-55667800 | None:intergenic | 15.0% |
| !! | TCTAAATCTTAAAATTGAAT+CGG | + | chr8_1:55668137-55668156 | None:intergenic | 15.0% |
| !! | TACAAAATGATTAAAAAACA+AGG | + | chr8_1:55668208-55668227 | None:intergenic | 15.0% |
| !!! | ATCTTTTAAATCAATTCTTT+AGG | - | chr8_1:55668947-55668966 | Msa1202150:intron | 15.0% |
| !!! | CATTAATTCATTTGATTTAT+TGG | - | chr8_1:55669159-55669178 | Msa1202150:intron | 15.0% |
| !!! | TTAATTTCAAACTCAATTTT+TGG | - | chr8_1:55669969-55669988 | Msa1202150:intron | 15.0% |
| !! | AGAGAAAAATAACAAAAAAG+GGG | + | chr8_1:55666658-55666677 | None:intergenic | 20.0% |
| !! | GAGAGAAAAATAACAAAAAA+GGG | + | chr8_1:55666659-55666678 | None:intergenic | 20.0% |
| !! | AGAGAGAAAAATAACAAAAA+AGG | + | chr8_1:55666660-55666679 | None:intergenic | 20.0% |
| !! | TCAGATTTATTGAATCAATT+TGG | - | chr8_1:55667142-55667161 | Msa1202150:intron | 20.0% |
| !!! | TTTGAAGTTGTATGATTTTT+AGG | - | chr8_1:55667468-55667487 | Msa1202150:intron | 20.0% |
| !!! | ATATATTGGCAAAACATTTT+AGG | - | chr8_1:55667673-55667692 | Msa1202150:intron | 20.0% |
| !!! | TATATTGGCAAAACATTTTA+GGG | - | chr8_1:55667674-55667693 | Msa1202150:intron | 20.0% |
| !!! | TTATTTTAACCTAATACTTG+GGG | + | chr8_1:55667717-55667736 | None:intergenic | 20.0% |
| !!! | CTTATTTTAACCTAATACTT+GGG | + | chr8_1:55667718-55667737 | None:intergenic | 20.0% |
| !! | CAAGTATTAGGTTAAAATAA+GGG | - | chr8_1:55667717-55667736 | Msa1202150:intron | 20.0% |
| !!! | CAAAACAAAATTTCTTTTTG+TGG | + | chr8_1:55667782-55667801 | None:intergenic | 20.0% |
| !!! | ATGATGGGTATTATATTTTA+GGG | + | chr8_1:55667912-55667931 | None:intergenic | 20.0% |
| !!! | AATGATGGGTATTATATTTT+AGG | + | chr8_1:55667913-55667932 | None:intergenic | 20.0% |
| !! | ACATCAATAAAACATGTTAA+TGG | - | chr8_1:55667946-55667965 | Msa1202150:intron | 20.0% |
| !!! | ACTTTCAAAACAATGTATTT+TGG | - | chr8_1:55668085-55668104 | Msa1202150:intron | 20.0% |
| !!! | CTTTCAAAACAATGTATTTT+GGG | - | chr8_1:55668086-55668105 | Msa1202150:intron | 20.0% |
| !!! | TTTGGTATTATTTTTTGTGA+AGG | - | chr8_1:55668411-55668430 | Msa1202150:intron | 20.0% |
| !!! | TTTTTTGTGAAGGATATAAT+TGG | - | chr8_1:55668421-55668440 | Msa1202150:intron | 20.0% |
| !!! | TTTTTGTGAAGGATATAATT+GGG | - | chr8_1:55668422-55668441 | Msa1202150:intron | 20.0% |
| !! | ACGAAACATATTTGAATATT+TGG | + | chr8_1:55668839-55668858 | None:intergenic | 20.0% |
| !! | AATAATACTTCATAGATATG+TGG | - | chr8_1:55668879-55668898 | Msa1202150:intron | 20.0% |
| !!! | GAAAAATTACCCAATTTTAA+TGG | + | chr8_1:55669668-55669687 | None:intergenic | 20.0% |
| !!! | ACTAAAATAGACAGAATTTT+TGG | + | chr8_1:55669787-55669806 | None:intergenic | 20.0% |
| !! | AATAGGGCATAAAAAAAAAA+AGG | + | chr8_1:55670450-55670469 | None:intergenic | 20.0% |
| !! | AGGAAATTGTAAAAAGAATA+GGG | + | chr8_1:55670466-55670485 | None:intergenic | 20.0% |
| !! | AAGGAAATTGTAAAAAGAAT+AGG | + | chr8_1:55670467-55670486 | None:intergenic | 20.0% |
| ! | TTATCTGGATTAAGAGAATT+AGG | - | chr8_1:55666456-55666475 | Msa1202150:three_prime_UTR | 25.0% |
| ! | TATCTGGATTAAGAGAATTA+GGG | - | chr8_1:55666457-55666476 | Msa1202150:three_prime_UTR | 25.0% |
| !!! | ATCTTTTTCACAATCTCAAT+TGG | - | chr8_1:55666569-55666588 | Msa1202150:three_prime_UTR | 25.0% |
| ! | TTGCAATATATTTGGATTGA+AGG | + | chr8_1:55666731-55666750 | None:intergenic | 25.0% |
| !! | GATTTCATGATTTGACTTAT+TGG | - | chr8_1:55666778-55666797 | Msa1202150:exon | 25.0% |
| !! | GTTTGAATTGTGATTTTTGT+AGG | - | chr8_1:55666800-55666819 | Msa1202150:CDS | 25.0% |
| !! | AATTGTGATTTTTGTAGGTT+AGG | - | chr8_1:55666805-55666824 | Msa1202150:CDS | 25.0% |
| !! | TTTTAGTCAATCGTCAATTT+AGG | - | chr8_1:55666986-55667005 | Msa1202150:intron | 25.0% |
| !! | GAAAAATTACTAGTTTGATC+AGG | - | chr8_1:55667114-55667133 | Msa1202150:intron | 25.0% |
| ! | ATTATTTATCATTGCAGGAA+GGG | - | chr8_1:55667551-55667570 | Msa1202150:intron | 25.0% |
| !!! | TATTTTAACCTAATACTTGG+GGG | + | chr8_1:55667716-55667735 | None:intergenic | 25.0% |
| !!! | CCTTATTTTAACCTAATACT+TGG | + | chr8_1:55667719-55667738 | None:intergenic | 25.0% |
| ! | CCAAGTATTAGGTTAAAATA+AGG | - | chr8_1:55667716-55667735 | Msa1202150:intron | 25.0% |
| !! | AAAACATGTTAATGGATGTT+AGG | - | chr8_1:55667954-55667973 | Msa1202150:intron | 25.0% |
| !! | ATTAGAATAAAGACCCATTT+TGG | - | chr8_1:55668236-55668255 | Msa1202150:intron | 25.0% |
| ! | AAAATGTTAGGGAGTAATTT+GGG | + | chr8_1:55668312-55668331 | None:intergenic | 25.0% |
| !! | AAAAGATTAAAGACCCATTT+TGG | + | chr8_1:55668469-55668488 | None:intergenic | 25.0% |
| ! | TTCAAAAGTTTAAACTTCCA+TGG | - | chr8_1:55668528-55668547 | Msa1202150:intron | 25.0% |
| ! | TCAAAAGTTTAAACTTCCAT+GGG | - | chr8_1:55668529-55668548 | Msa1202150:intron | 25.0% |
| ! | TGATGATCTTCAGATATAAA+AGG | + | chr8_1:55668674-55668693 | None:intergenic | 25.0% |
| ! | ATTAAATGAGATAAACCTTG+AGG | + | chr8_1:55668790-55668809 | None:intergenic | 25.0% |
| ! | AGGTTTATCTCATTTAATCA+TGG | - | chr8_1:55668792-55668811 | Msa1202150:intron | 25.0% |
| ! | GGTTTATCTCATTTAATCAT+GGG | - | chr8_1:55668793-55668812 | Msa1202150:intron | 25.0% |
| !!! | CTATGAAGTATTATTTTGAC+AGG | + | chr8_1:55668874-55668893 | None:intergenic | 25.0% |
| ! | TGTACATTATATAAGCTTGT+TGG | - | chr8_1:55668998-55669017 | Msa1202150:intron | 25.0% |
| ! | ATTATGGCCAAGAAAAAAAA+CGG | + | chr8_1:55669104-55669123 | None:intergenic | 25.0% |
| !! | ATTTGATTTATTGGTGAGAA+TGG | - | chr8_1:55669168-55669187 | Msa1202150:intron | 25.0% |
| ! | TAATGAAAAGCTTATGATTC+AGG | - | chr8_1:55669214-55669233 | Msa1202150:intron | 25.0% |
| ! | AATGAAAAGCTTATGATTCA+GGG | - | chr8_1:55669215-55669234 | Msa1202150:intron | 25.0% |
| !! | TGATATTTTACTTCACTTAC+AGG | - | chr8_1:55669544-55669563 | Msa1202150:intron | 25.0% |
| ! | ACAGTAGAAACCATTAAAAT+TGG | - | chr8_1:55669655-55669674 | Msa1202150:intron | 25.0% |
| ! | CAGTAGAAACCATTAAAATT+GGG | - | chr8_1:55669656-55669675 | Msa1202150:intron | 25.0% |
| ! | ATAAAAAAGACACACTTTAG+GGG | + | chr8_1:55669698-55669717 | None:intergenic | 25.0% |
| ! | CATAAAAAAGACACACTTTA+GGG | + | chr8_1:55669699-55669718 | None:intergenic | 25.0% |
| ! | TTGATCACTTATAGTCAAAT+AGG | + | chr8_1:55669862-55669881 | None:intergenic | 25.0% |
| ! | TCAGTTAACATTATAAAACC+AGG | - | chr8_1:55670303-55670322 | Msa1202150:intron | 25.0% |
| ! | AATTTACAGTACATAACTAG+TGG | - | chr8_1:55670387-55670406 | Msa1202150:intron | 25.0% |
| TGAAAATGTTTCTCAAGCTT+TGG | - | chr8_1:55666908-55666927 | Msa1202150:intron | 30.0% | |
| ! | ACCGTCGATTATATTAACTT+CGG | - | chr8_1:55667083-55667102 | Msa1202150:intron | 30.0% |
| ! | TACTCAACTTTTACGAGTTT+AGG | - | chr8_1:55667191-55667210 | Msa1202150:intron | 30.0% |
| ! | ACTCAACTTTTACGAGTTTA+GGG | - | chr8_1:55667192-55667211 | Msa1202150:intron | 30.0% |
| !!! | TCCTTTTTTATGTGATTCTG+TGG | - | chr8_1:55667241-55667260 | Msa1202150:intron | 30.0% |
| !!! | CCTTTTTTATGTGATTCTGT+GGG | - | chr8_1:55667242-55667261 | Msa1202150:intron | 30.0% |
| ! | GTCGACTTTAATTTAGAATC+CGG | - | chr8_1:55667300-55667319 | Msa1202150:intron | 30.0% |
| TAATAGTAGTGAACATGCTA+GGG | - | chr8_1:55667507-55667526 | Msa1202150:intron | 30.0% | |
| TGTGCATTATTTATCATTGC+AGG | - | chr8_1:55667546-55667565 | Msa1202150:intron | 30.0% | |
| CATTATTTATCATTGCAGGA+AGG | - | chr8_1:55667550-55667569 | Msa1202150:intron | 30.0% | |
| TTATTTATCATTGCAGGAAG+GGG | - | chr8_1:55667552-55667571 | Msa1202150:intron | 30.0% | |
| ! | TAAAAACCATATTGATGGCA+TGG | + | chr8_1:55667599-55667618 | None:intergenic | 30.0% |
| ATGCTTAAACAATACCCTAA+GGG | - | chr8_1:55667871-55667890 | Msa1202150:intron | 30.0% | |
| TACAGAACAAAGACAATGAT+GGG | + | chr8_1:55667927-55667946 | None:intergenic | 30.0% | |
| AAGTCATCATTGGAAAAGTT+GGG | + | chr8_1:55667985-55668004 | None:intergenic | 30.0% | |
| ATAGAAAGAGAAGTCATCAT+TGG | + | chr8_1:55667995-55668014 | None:intergenic | 30.0% | |
| TTAGACAAAACTTCTGATGT+CGG | - | chr8_1:55668152-55668171 | Msa1202150:intron | 30.0% | |
| !!! | ATTTGGGTATTGAGTTTTGT+CGG | + | chr8_1:55668296-55668315 | None:intergenic | 30.0% |
| GAAAATGTTAGGGAGTAATT+TGG | + | chr8_1:55668313-55668332 | None:intergenic | 30.0% | |
| ! | ACTCCCTAACATTTTCATAA+TGG | - | chr8_1:55668317-55668336 | Msa1202150:intron | 30.0% |
| AAATTGTGAGGAACCAAAAT+GGG | - | chr8_1:55668453-55668472 | Msa1202150:intron | 30.0% | |
| CAAAAGTTTAAACTTCCATG+GGG | - | chr8_1:55668530-55668549 | Msa1202150:intron | 30.0% | |
| ACATCCGATATTTGTAAAAC+CGG | - | chr8_1:55668563-55668582 | Msa1202150:intron | 30.0% | |
| ! | CTATCCGGTTTTACAAATAT+CGG | + | chr8_1:55668570-55668589 | None:intergenic | 30.0% |
| !! | ATTTTAACCAAGAGAAGAGA+CGG | - | chr8_1:55668618-55668637 | Msa1202150:intron | 30.0% |
| ATTCATTAAGTCTCATTGTC+TGG | - | chr8_1:55668645-55668664 | Msa1202150:intron | 30.0% | |
| TCATTTAATCATGGGAGAAT+AGG | - | chr8_1:55668801-55668820 | Msa1202150:intron | 30.0% | |
| AACATACTTCTGTTGATATG+TGG | - | chr8_1:55668904-55668923 | Msa1202150:intron | 30.0% | |
| ATGTTGTTGTGTATTATGTG+AGG | - | chr8_1:55669023-55669042 | Msa1202150:intron | 30.0% | |
| ! | TTTTCATTATATACAGCACC+AGG | + | chr8_1:55669203-55669222 | None:intergenic | 30.0% |
| ATGAAAAGCTTATGATTCAG+GGG | - | chr8_1:55669216-55669235 | Msa1202150:intron | 30.0% | |
| AACATGAAACTGAAAAGCTT+AGG | - | chr8_1:55669258-55669277 | Msa1202150:intron | 30.0% | |
| !! | AGTTTTATAGTGCAATCGTA+TGG | - | chr8_1:55669378-55669397 | Msa1202150:intron | 30.0% |
| ATTGGATTTGAACCTTGAAA+GGG | - | chr8_1:55669446-55669465 | Msa1202150:intron | 30.0% | |
| !!! | AATTCTTGTTTTCACTGCTA+TGG | - | chr8_1:55669520-55669539 | Msa1202150:intron | 30.0% |
| TAAAAAAGACACACTTTAGG+GGG | + | chr8_1:55669697-55669716 | None:intergenic | 30.0% | |
| CCATAAAAAAGACACACTTT+AGG | + | chr8_1:55669700-55669719 | None:intergenic | 30.0% | |
| !!! | CCTAAAGTGTGTCTTTTTTA+TGG | - | chr8_1:55669697-55669716 | Msa1202150:CDS | 30.0% |
| CACTTATAGTCAAATAGGTT+TGG | + | chr8_1:55669857-55669876 | None:intergenic | 30.0% | |
| ! | AAGCTTTGTATGTGATTCTT+TGG | + | chr8_1:55670047-55670066 | None:intergenic | 30.0% |
| ! | AGAAAATCGACTTCTACTAA+AGG | + | chr8_1:55670078-55670097 | None:intergenic | 30.0% |
| ! | AAGAAAAGATGCCCAATTTT+TGG | + | chr8_1:55670119-55670138 | None:intergenic | 30.0% |
| AAATTTGCGTCATGATATTC+AGG | - | chr8_1:55670144-55670163 | Msa1202150:intron | 30.0% | |
| GTTAACATTATAAAACCAGG+TGG | - | chr8_1:55670306-55670325 | Msa1202150:intron | 30.0% | |
| AAAGATCAAGAGTAGCTATT+TGG | - | chr8_1:55670331-55670350 | Msa1202150:intron | 30.0% | |
| ACTGAAGTAGATAATAATCC+AGG | + | chr8_1:55670566-55670585 | None:intergenic | 30.0% | |
| AGACATATGCGACAATTATC+TGG | - | chr8_1:55666441-55666460 | Msa1202150:three_prime_UTR | 35.0% | |
| GAAGCTGAAGATGAAAAGTA+TGG | + | chr8_1:55666540-55666559 | None:intergenic | 35.0% | |
| TCTCAATTGGTCAAATCCAA+TGG | - | chr8_1:55666582-55666601 | Msa1202150:three_prime_UTR | 35.0% | |
| TTGTAGGTTAGGAGATTAGA+AGG | - | chr8_1:55666816-55666835 | Msa1202150:CDS | 35.0% | |
| TGTAGGTTAGGAGATTAGAA+GGG | - | chr8_1:55666817-55666836 | Msa1202150:CDS | 35.0% | |
| CCCGAAGTTAATATAATCGA+CGG | + | chr8_1:55667087-55667106 | None:intergenic | 35.0% | |
| ! | CCGTCGATTATATTAACTTC+GGG | - | chr8_1:55667084-55667103 | Msa1202150:intron | 35.0% |
| TACGAGTTTAGGGACTAAAT+TGG | - | chr8_1:55667202-55667221 | Msa1202150:intron | 35.0% | |
| CCCACAGAATCACATAAAAA+AGG | + | chr8_1:55667245-55667264 | None:intergenic | 35.0% | |
| GTTTGTGTTACCAAATGTTG+TGG | - | chr8_1:55667278-55667297 | Msa1202150:intron | 35.0% | |
| TTAAAGTCGACCACAACATT+TGG | + | chr8_1:55667291-55667310 | None:intergenic | 35.0% | |
| ACAAAATAGCTCACATTAGC+CGG | + | chr8_1:55667322-55667341 | None:intergenic | 35.0% | |
| TGATTTGAATTTGGACAGGT+TGG | + | chr8_1:55667379-55667398 | None:intergenic | 35.0% | |
| ! | CTTCTGATTTGAATTTGGAC+AGG | + | chr8_1:55667383-55667402 | None:intergenic | 35.0% |
| ! | CTGCACTTCTGATTTGAATT+TGG | + | chr8_1:55667388-55667407 | None:intergenic | 35.0% |
| GTAATAGTAGTGAACATGCT+AGG | - | chr8_1:55667506-55667525 | Msa1202150:intron | 35.0% | |
| TGAGCTAGATACACTAATTC+AGG | - | chr8_1:55667628-55667647 | Msa1202150:CDS | 35.0% | |
| TTCCTTACACAATACTGTTC+GGG | + | chr8_1:55667758-55667777 | None:intergenic | 35.0% | |
| GTTCCTTACACAATACTGTT+CGG | + | chr8_1:55667759-55667778 | None:intergenic | 35.0% | |
| GATGCTTAAACAATACCCTA+AGG | - | chr8_1:55667870-55667889 | Msa1202150:intron | 35.0% | |
| GTACAGAACAAAGACAATGA+TGG | + | chr8_1:55667928-55667947 | None:intergenic | 35.0% | |
| GAAGTCATCATTGGAAAAGT+TGG | + | chr8_1:55667986-55668005 | None:intergenic | 35.0% | |
| ! | ATTTTGGGCACTTGTGAAAT+TGG | - | chr8_1:55668101-55668120 | Msa1202150:intron | 35.0% |
| AAATTGTGAGGGACCAAAAT+GGG | + | chr8_1:55668252-55668271 | None:intergenic | 35.0% | |
| !!! | TTTGGGTATTGAGTTTTGTC+GGG | + | chr8_1:55668295-55668314 | None:intergenic | 35.0% |
| GGGCCATTATGAAAATGTTA+GGG | + | chr8_1:55668323-55668342 | None:intergenic | 35.0% | |
| TGGGCCATTATGAAAATGTT+AGG | + | chr8_1:55668324-55668343 | None:intergenic | 35.0% | |
| ! | TAGTCCCTGATGTTTTCATA+CGG | + | chr8_1:55668390-55668409 | None:intergenic | 35.0% |
| GAAAACATCAGGGACTAATT+TGG | - | chr8_1:55668393-55668412 | Msa1202150:intron | 35.0% | |
| GAAATTGTGAGGAACCAAAA+TGG | - | chr8_1:55668452-55668471 | Msa1202150:intron | 35.0% | |
| CCTTTGCTTTCTATACTATC+CGG | + | chr8_1:55668585-55668604 | None:intergenic | 35.0% | |
| ! | TTTTAACCAAGAGAAGAGAC+GGG | - | chr8_1:55668619-55668638 | Msa1202150:intron | 35.0% |
| TGAAGATCATCAGACCAAAT+GGG | - | chr8_1:55668682-55668701 | Msa1202150:intron | 35.0% | |
| CAAGAATCCTATCATAGCAA+CGG | + | chr8_1:55668748-55668767 | None:intergenic | 35.0% | |
| GTTGCTATGATAGGATTCTT+GGG | - | chr8_1:55668747-55668766 | Msa1202150:intron | 35.0% | |
| AAATGAGATAAACCTTGAGG+AGG | + | chr8_1:55668787-55668806 | None:intergenic | 35.0% | |
| AGGAGAGTAAATCTAGTAGT+TGG | - | chr8_1:55668967-55668986 | Msa1202150:intron | 35.0% | |
| ! | GAGGGCATATGTCTTAAAAT+GGG | - | chr8_1:55669065-55669084 | Msa1202150:intron | 35.0% |
| !!! | TATGCGTCCGTTTTTTTTCT+TGG | - | chr8_1:55669094-55669113 | Msa1202150:intron | 35.0% |
| CATGTTGCAACAGTGAAAAA+TGG | + | chr8_1:55669244-55669263 | None:intergenic | 35.0% | |
| GTGAATTGAGGTATATTCAC+CGG | - | chr8_1:55669303-55669322 | Msa1202150:intron | 35.0% | |
| AAATCAAATGAGCACAGCTA+TGG | + | chr8_1:55669352-55669371 | None:intergenic | 35.0% | |
| ! | AATCGTATGGTTTGTGATAC+AGG | - | chr8_1:55669391-55669410 | Msa1202150:intron | 35.0% |
| TTTGTGATACAGGTATGAGA+TGG | - | chr8_1:55669401-55669420 | Msa1202150:intron | 35.0% | |
| GATTGGATTTGAACCTTGAA+AGG | - | chr8_1:55669445-55669464 | Msa1202150:intron | 35.0% | |
| TTGGATTTGAACCTTGAAAG+GGG | - | chr8_1:55669447-55669466 | Msa1202150:intron | 35.0% | |
| ACTTACCCTATCAAGTTTGT+TGG | + | chr8_1:55669619-55669638 | None:intergenic | 35.0% | |
| !! | GCTTCTGGTAGTGTATTTTT+GGG | - | chr8_1:55669726-55669745 | Msa1202150:intron | 35.0% |
| !! | CTTCTGGTAGTGTATTTTTG+GGG | - | chr8_1:55669727-55669746 | Msa1202150:intron | 35.0% |
| !!! | TTCTGGTAGTGTATTTTTGG+GGG | - | chr8_1:55669728-55669747 | Msa1202150:intron | 35.0% |
| GATCAAATGTAGCTTATGCT+TGG | - | chr8_1:55669876-55669895 | Msa1202150:intron | 35.0% | |
| ! | TCATTCTTTAAGAGCACAAC+TGG | - | chr8_1:55670171-55670190 | Msa1202150:CDS | 35.0% |
| GAGGTCATAAAATACTGCAT+AGG | - | chr8_1:55670208-55670227 | Msa1202150:CDS | 35.0% | |
| TCGCATATGTCTACAAATCG+CGG | + | chr8_1:55666433-55666452 | None:intergenic | 40.0% | |
| ! | ATTTGAAGCGAAGACGATGA+TGG | + | chr8_1:55666498-55666517 | None:intergenic | 40.0% |
| TTTCTCTCTCTGTGCATGTT+TGG | - | chr8_1:55666671-55666690 | Msa1202150:three_prime_UTR | 40.0% | |
| !! | TCTCAAGCTTTGGTGTCAAA+AGG | - | chr8_1:55666918-55666937 | Msa1202150:intron | 40.0% |
| GAGTTTAGGGACTAAATTGG+TGG | - | chr8_1:55667205-55667224 | Msa1202150:intron | 40.0% | |
| !! | GAGGAAGTGTTTGTTATGTG+TGG | - | chr8_1:55667443-55667462 | Msa1202150:intron | 40.0% |
| TGGCATGGCATTAGTAAAGT+AGG | + | chr8_1:55667584-55667603 | None:intergenic | 40.0% | |
| CTAATGCCATGCCATCAATA+TGG | - | chr8_1:55667590-55667609 | Msa1202150:intron | 40.0% | |
| CATCATTTCCCCCAAGTATT+AGG | - | chr8_1:55667705-55667724 | Msa1202150:intron | 40.0% | |
| AATGCTAACAAGTGCCCTTA+GGG | + | chr8_1:55667888-55667907 | None:intergenic | 40.0% | |
| AAATGCTAACAAGTGCCCTT+AGG | + | chr8_1:55667889-55667908 | None:intergenic | 40.0% | |
| GCAACAACAAAAGTTTGAGC+AGG | + | chr8_1:55668186-55668205 | None:intergenic | 40.0% | |
| GAAATTGTGAGGGACCAAAA+TGG | + | chr8_1:55668253-55668272 | None:intergenic | 40.0% | |
| !!! | TTGGGTATTGAGTTTTGTCG+GGG | + | chr8_1:55668294-55668313 | None:intergenic | 40.0% |
| AATGAGTCAGGGACTGAATT+GGG | + | chr8_1:55668343-55668362 | None:intergenic | 40.0% | |
| ! | AGTCCCTGATGTTTTCATAC+GGG | + | chr8_1:55668389-55668408 | None:intergenic | 40.0% |
| GATGTTAATAAGCTTCCCCA+TGG | + | chr8_1:55668548-55668567 | None:intergenic | 40.0% | |
| CCGGATAGTATAGAAAGCAA+AGG | - | chr8_1:55668582-55668601 | Msa1202150:intron | 40.0% | |
| ! | AATTTTCCCGTCTCTTCTCT+TGG | + | chr8_1:55668628-55668647 | None:intergenic | 40.0% |
| CTGAAGATCATCAGACCAAA+TGG | - | chr8_1:55668681-55668700 | Msa1202150:intron | 40.0% | |
| GAAGATCATCAGACCAAATG+GGG | - | chr8_1:55668683-55668702 | Msa1202150:intron | 40.0% | |
| CGTTGCTATGATAGGATTCT+TGG | - | chr8_1:55668746-55668765 | Msa1202150:intron | 40.0% | |
| TTATGTGAGGAAATTGCTGC+CGG | - | chr8_1:55669036-55669055 | Msa1202150:intron | 40.0% | |
| ! | GGAGGGCATATGTCTTAAAA+TGG | - | chr8_1:55669064-55669083 | Msa1202150:intron | 40.0% |
| !!! | TGAGAATGGTTTTGTTTGCC+TGG | - | chr8_1:55669182-55669201 | Msa1202150:intron | 40.0% |
| AGAAGATGCGTAGTGAATTG+AGG | - | chr8_1:55669291-55669310 | Msa1202150:intron | 40.0% | |
| ! | TGGTCAAGATTTGCTCAAAC+CGG | + | chr8_1:55669325-55669344 | None:intergenic | 40.0% |
| TGGATTTGAACCTTGAAAGG+GGG | - | chr8_1:55669448-55669467 | Msa1202150:intron | 40.0% | |
| ACTTCACTTACAGGAGAACT+AGG | - | chr8_1:55669553-55669572 | Msa1202150:intron | 40.0% | |
| CTTCACTTACAGGAGAACTA+GGG | - | chr8_1:55669554-55669573 | Msa1202150:intron | 40.0% | |
| ACCTGACCAACAAACTTGAT+AGG | - | chr8_1:55669610-55669629 | Msa1202150:intron | 40.0% | |
| CCTGACCAACAAACTTGATA+GGG | - | chr8_1:55669611-55669630 | Msa1202150:intron | 40.0% | |
| !! | TTTTTATGGAAGCACGCTTC+TGG | - | chr8_1:55669711-55669730 | Msa1202150:intron | 40.0% |
| !! | CGCTTCTGGTAGTGTATTTT+TGG | - | chr8_1:55669725-55669744 | Msa1202150:intron | 40.0% |
| TTGCAGCTCATGCCAAAAAT+TGG | - | chr8_1:55670104-55670123 | Msa1202150:intron | 40.0% | |
| TGCAGCTCATGCCAAAAATT+GGG | - | chr8_1:55670105-55670124 | Msa1202150:intron | 40.0% | |
| ACTGGAAGCAGCTAAATATG+AGG | - | chr8_1:55670189-55670208 | Msa1202150:CDS | 40.0% | |
| TTGTTTCAATCTCTGCCGTT+GGG | - | chr8_1:55670236-55670255 | Msa1202150:intron | 40.0% | |
| TCCGCATCTTGATGTAAACA+GGG | - | chr8_1:55670269-55670288 | Msa1202150:intron | 40.0% | |
| ACCCTGTTTACATCAAGATG+CGG | + | chr8_1:55670273-55670292 | None:intergenic | 40.0% | |
| ! | ACTCTTGATCTTTTTCCACC+TGG | + | chr8_1:55670324-55670343 | None:intergenic | 40.0% |
| TACATAACTAGTGGAGCTGA+AGG | - | chr8_1:55670396-55670415 | Msa1202150:intron | 40.0% | |
| ATGGCGAATGAATACACGAA+AGG | + | chr8_1:55670486-55670505 | None:intergenic | 40.0% | |
| GATAAACACACGCATCTTAG+AGG | - | chr8_1:55670540-55670559 | Msa1202150:CDS | 40.0% | |
| GAGGAACAAGTGTTTGCCAT+TGG | + | chr8_1:55666601-55666620 | None:intergenic | 45.0% | |
| CTTGTTCCTCGTTGACACAT+TGG | - | chr8_1:55666611-55666630 | Msa1202150:three_prime_UTR | 45.0% | |
| GTTAGGAGATTAGAAGGGCA+AGG | - | chr8_1:55666822-55666841 | Msa1202150:CDS | 45.0% | |
| ! | ATAGCCTCAGCTTGCTTTGA+AGG | + | chr8_1:55666852-55666871 | None:intergenic | 45.0% |
| TTTATCATTGCAGGAAGGGG+AGG | - | chr8_1:55667555-55667574 | Msa1202150:intron | 45.0% | |
| TGCCCGAACAGTATTGTGTA+AGG | - | chr8_1:55667753-55667772 | Msa1202150:intron | 45.0% | |
| AAGCAGTGAGCGGAATGAAA+TGG | + | chr8_1:55668027-55668046 | None:intergenic | 45.0% | |
| AATGCAATCGAAGCAGTGAG+CGG | + | chr8_1:55668037-55668056 | None:intergenic | 45.0% | |
| ! | GTTTTGTCGGGGACTGAATT+GGG | + | chr8_1:55668283-55668302 | None:intergenic | 45.0% |
| !! | AGTTTTGTCGGGGACTGAAT+TGG | + | chr8_1:55668284-55668303 | None:intergenic | 45.0% |
| CAATGAGTCAGGGACTGAAT+TGG | + | chr8_1:55668344-55668363 | None:intergenic | 45.0% | |
| TCCCTGACTCATTGTAACAG+AGG | - | chr8_1:55668350-55668369 | Msa1202150:intron | 45.0% | |
| CCCTCTGTTACAATGAGTCA+GGG | + | chr8_1:55668354-55668373 | None:intergenic | 45.0% | |
| CCCTGACTCATTGTAACAGA+GGG | - | chr8_1:55668351-55668370 | Msa1202150:intron | 45.0% | |
| CCTGACTCATTGTAACAGAG+GGG | - | chr8_1:55668352-55668371 | Msa1202150:intron | 45.0% | |
| TCCCCCGTATGAAAACATCA+GGG | - | chr8_1:55668383-55668402 | Msa1202150:intron | 45.0% | |
| ! | TCCCTGATGTTTTCATACGG+GGG | + | chr8_1:55668387-55668406 | None:intergenic | 45.0% |
| ! | GTCCCTGATGTTTTCATACG+GGG | + | chr8_1:55668388-55668407 | None:intergenic | 45.0% |
| AAGGATATAATTGGGCCGCA+AGG | - | chr8_1:55668430-55668449 | Msa1202150:intron | 45.0% | |
| GGTTCCTCACAATTTCCTTG+CGG | + | chr8_1:55668448-55668467 | None:intergenic | 45.0% | |
| GAAGTCACAAACACCCCATT+TGG | + | chr8_1:55668699-55668718 | None:intergenic | 45.0% | |
| TGTGTGTCCGTTGCTATGAT+AGG | - | chr8_1:55668738-55668757 | Msa1202150:intron | 45.0% | |
| ATCGATTGTGATCCTCCTCA+AGG | - | chr8_1:55668772-55668791 | Msa1202150:intron | 45.0% | |
| TATGTGAGGAAATTGCTGCC+GGG | - | chr8_1:55669037-55669056 | Msa1202150:intron | 45.0% | |
| TCAAATGAGCACAGCTATGG+TGG | + | chr8_1:55669349-55669368 | None:intergenic | 45.0% | |
| TCTTCACTTACCCCCTTTCA+AGG | + | chr8_1:55669461-55669480 | None:intergenic | 45.0% | |
| !! | CCCTATCAAGTTTGTTGGTC+AGG | + | chr8_1:55669614-55669633 | None:intergenic | 45.0% |
| !! | TTTGGGGGCTTTGAGCATAT+AGG | - | chr8_1:55669743-55669762 | Msa1202150:intron | 45.0% |
| !! | TTGGGGGCTTTGAGCATATA+GGG | - | chr8_1:55669744-55669763 | Msa1202150:intron | 45.0% |
| CTTGTTTCAATCTCTGCCGT+TGG | - | chr8_1:55670235-55670254 | Msa1202150:intron | 45.0% | |
| CTCCGCATCTTGATGTAAAC+AGG | - | chr8_1:55670268-55670287 | Msa1202150:intron | 45.0% | |
| ! | CTTGATGTAAACAGGGTGTC+TGG | - | chr8_1:55670276-55670295 | Msa1202150:intron | 45.0% |
| AAGGCCCAACTTTGCCTAAT+GGG | + | chr8_1:55670431-55670450 | None:intergenic | 45.0% | |
| AAAGGCCCAACTTTGCCTAA+TGG | + | chr8_1:55670432-55670451 | None:intergenic | 45.0% | |
| GTATTCATTCGCCATGCTTG+TGG | - | chr8_1:55670491-55670510 | Msa1202150:CDS | 45.0% | |
| GTGCAAATATGCCACAAGCA+TGG | + | chr8_1:55670505-55670524 | None:intergenic | 45.0% | |
| !! | TAAAGAAAAATATAAAATTA+TGG | + | chr8_1:55669120-55669139 | None:intergenic | 5.0% |
| CAAGAGCCAATGTGTCAACG+AGG | + | chr8_1:55666620-55666639 | None:intergenic | 50.0% | |
| AGTGCCTTCAAAGCAAGCTG+AGG | - | chr8_1:55666845-55666864 | Msa1202150:CDS | 50.0% | |
| ! | ATCAGAAGTGCAGAGCTCAC+AGG | - | chr8_1:55667395-55667414 | Msa1202150:intron | 50.0% |
| GGGTCGCAAGGAAATTGTGA+GGG | + | chr8_1:55668263-55668282 | None:intergenic | 50.0% | |
| TGGGTCGCAAGGAAATTGTG+AGG | + | chr8_1:55668264-55668283 | None:intergenic | 50.0% | |
| CCCCTCTGTTACAATGAGTC+AGG | + | chr8_1:55668355-55668374 | None:intergenic | 50.0% | |
| GTCCCCCGTATGAAAACATC+AGG | - | chr8_1:55668382-55668401 | Msa1202150:intron | 50.0% | |
| ATGAGCACAGCTATGGTGGT+TGG | + | chr8_1:55669345-55669364 | None:intergenic | 50.0% | |
| GAGATGGACAAAGTCACTGC+TGG | - | chr8_1:55669417-55669436 | Msa1202150:intron | 50.0% | |
| CACTTACAGGAGAACTAGGG+AGG | - | chr8_1:55669557-55669576 | Msa1202150:intron | 50.0% | |
| ! | AAAGACACACTTTAGGGGGC+AGG | + | chr8_1:55669693-55669712 | None:intergenic | 50.0% |
| !! | TGGGGGCTTTGAGCATATAG+GGG | - | chr8_1:55669745-55669764 | Msa1202150:intron | 50.0% |
| GAAGGAACTAGCTCCCCATT+AGG | - | chr8_1:55670414-55670433 | Msa1202150:intron | 50.0% | |
| AGCTCCCCATTAGGCAAAGT+TGG | - | chr8_1:55670423-55670442 | Msa1202150:intron | 50.0% | |
| GCTCCCCATTAGGCAAAGTT+GGG | - | chr8_1:55670424-55670443 | Msa1202150:intron | 50.0% | |
| AGGCCCAACTTTGCCTAATG+GGG | + | chr8_1:55670430-55670449 | None:intergenic | 50.0% | |
| TGGGCCGCAAGGAAATTGTG+AGG | - | chr8_1:55668441-55668460 | Msa1202150:intron | 55.0% | |
| AGGAAATTGCTGCCGGGACT+GGG | - | chr8_1:55669043-55669062 | Msa1202150:intron | 55.0% | |
| AGTCACTGCTGGACAGCGAT+TGG | - | chr8_1:55669428-55669447 | Msa1202150:intron | 55.0% | |
| !! | GGGGGCTTTGAGCATATAGG+GGG | - | chr8_1:55669746-55669765 | Msa1202150:intron | 55.0% |
| ACACACGCATCTTAGAGGCC+TGG | - | chr8_1:55670545-55670564 | Msa1202150:CDS | 55.0% | |
| GGGGACTGAATTGGGTCGCA+AGG | + | chr8_1:55668275-55668294 | None:intergenic | 60.0% | |
| GAGGAAATTGCTGCCGGGAC+TGG | - | chr8_1:55669042-55669061 | Msa1202150:intron | 60.0% | |
| AAATTGCTGCCGGGACTGGG+AGG | - | chr8_1:55669046-55669065 | Msa1202150:intron | 60.0% | |
| AATTGCTGCCGGGACTGGGA+GGG | - | chr8_1:55669047-55669066 | Msa1202150:intron | 60.0% | |
| GACATATGCCCTCCCAGTCC+CGG | + | chr8_1:55669058-55669077 | None:intergenic | 60.0% | |
| GCGGAGAACAGCAAGCCCAA+CGG | + | chr8_1:55670254-55670273 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 55666426 | 55670649 | 55666426 | ID=Msa1202150;Name=Msa1202150 |
| chr8_1 | mRNA | 55666426 | 55670649 | 55666426 | ID=Msa1202150-mRNA-1;Parent=Msa1202150;Name=Msa1202150-mRNA-1;_AED=0.23;_eAED=0.24;_QI=0|0.33|0.57|1|0.66|0.71|7|364|200 |
| chr8_1 | exon | 55666426 | 55666909 | 55666426 | ID=Msa1202150-mRNA-1:exon:18042;Parent=Msa1202150-mRNA-1 |
| chr8_1 | exon | 55667481 | 55667496 | 55667481 | ID=Msa1202150-mRNA-1:exon:18041;Parent=Msa1202150-mRNA-1 |
| chr8_1 | exon | 55667606 | 55667662 | 55667606 | ID=Msa1202150-mRNA-1:exon:18040;Parent=Msa1202150-mRNA-1 |
| chr8_1 | exon | 55667763 | 55667839 | 55667763 | ID=Msa1202150-mRNA-1:exon:18039;Parent=Msa1202150-mRNA-1 |
| chr8_1 | exon | 55669659 | 55669718 | 55669659 | ID=Msa1202150-mRNA-1:exon:18038;Parent=Msa1202150-mRNA-1 |
| chr8_1 | exon | 55670146 | 55670253 | 55670146 | ID=Msa1202150-mRNA-1:exon:18037;Parent=Msa1202150-mRNA-1 |
| chr8_1 | exon | 55670485 | 55670649 | 55670485 | ID=Msa1202150-mRNA-1:exon:18036;Parent=Msa1202150-mRNA-1 |
| chr8_1 | CDS | 55670485 | 55670649 | 55670485 | ID=Msa1202150-mRNA-1:cds;Parent=Msa1202150-mRNA-1 |
| chr8_1 | CDS | 55670146 | 55670253 | 55670146 | ID=Msa1202150-mRNA-1:cds;Parent=Msa1202150-mRNA-1 |
| chr8_1 | CDS | 55669659 | 55669718 | 55669659 | ID=Msa1202150-mRNA-1:cds;Parent=Msa1202150-mRNA-1 |
| chr8_1 | CDS | 55667763 | 55667839 | 55667763 | ID=Msa1202150-mRNA-1:cds;Parent=Msa1202150-mRNA-1 |
| chr8_1 | CDS | 55667606 | 55667662 | 55667606 | ID=Msa1202150-mRNA-1:cds;Parent=Msa1202150-mRNA-1 |
| chr8_1 | CDS | 55667481 | 55667496 | 55667481 | ID=Msa1202150-mRNA-1:cds;Parent=Msa1202150-mRNA-1 |
| chr8_1 | CDS | 55666790 | 55666909 | 55666790 | ID=Msa1202150-mRNA-1:cds;Parent=Msa1202150-mRNA-1 |
| chr8_1 | three_prime_UTR | 55666426 | 55666789 | 55666426 | ID=Msa1202150-mRNA-1:three_prime_utr;Parent=Msa1202150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
