AlfalfaGEDB | Msa1280360

M. sativa cultivar zhongmu-4 / Msa1280360

KEGG: K13459
GO: -
PFAM: PF07961.14

Nr:

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Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1280360	XP_029127708.1	43.702	2755	1346	57	469	3073	1	2700	0.0	1847
Msa1280360	XP_029127708.1	46.365	2655	1307	42	3	2577	52	2669	0.0	1962

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Swissprot:

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Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
No data available in table

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Trembl:

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Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1280360	R4HCF6	23.614	830	441	31	30	749	4523	5269	2.32e-19	109
Msa1280360	R4HCF6	31.014	503	297	12	1	470	4777	5262	1.25e-43	189
Msa1280360	R4HCF6	32.543	2867	1704	63	347	3041	877	3685	0.0	1102
Msa1280360	R4HCF6	33.842	3147	1883	67	28	3041	1133	4213	0.0	1332
Msa1280360	R4HCF6	35.188	3163	1866	61	10	3041	1624	4733	0.0	1449
Msa1280360	R4HCF6	35.698	3157	1848	56	19	3042	2161	5268	0.0	1472

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TFs/TRs:

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Gene ID	Type	Classification
No data available in table

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Protein Kinases:

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Gene ID	Type	Classification
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Network:

Co-expression Network

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Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0004180	Msa1280360	-0.807878	4.076336e-50	-8.615850e-47
Msa0014960	Msa1280360	-0.801191	1.011491e-48	-8.615850e-47
Msa0016380	Msa1280360	-0.800671	1.292032e-48	-8.615850e-47
Msa0024320	Msa1280360	-0.801015	1.098966e-48	-8.615850e-47
Msa0036550	Msa1280360	0.823546	1.306764e-53	-8.615850e-47
Msa0040930	Msa1280360	0.802911	4.480939e-49	-8.615850e-47
Msa0042210	Msa1280360	-0.812647	3.816196e-51	-8.615850e-47
Msa0065400	Msa1280360	-0.806301	8.793282e-50	-8.615850e-47
Msa0065520	Msa1280360	-0.812327	4.482776e-51	-8.615850e-47
Msa0075820	Msa1280360	-0.807361	5.248211e-50	-8.615850e-47

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PPI

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Gene1	Gene2	Type
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Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1280360	MtrunA17_Chr1g0167981	29.368	2135	1346	58	31	2091	1041	3087	0.0	740
Msa1280360	MtrunA17_Chr1g0167981	28.271	2331	1428	65	908	3065	823	3082	0.0	723
Msa1280360	MtrunA17_Chr1g0167981	27.378	1819	1115	46	1407	3071	805	2571	8.10e-146	513
Msa1280360	MtrunA17_Chr1g0167981	28.151	1087	679	33	4	1047	2060	3087	2.40e-90	331
Msa1280360	MtrunA17_Chr1g0172051	28.333	2340	1437	60	894	3067	815	3080	0.0	740
Msa1280360	MtrunA17_Chr1g0172051	28.665	2128	1360	59	32	2091	1046	3083	0.0	709
Msa1280360	MtrunA17_Chr1g0172051	29.252	1617	996	50	27	1587	1583	3107	1.28e-149	525
Msa1280360	MtrunA17_Chr1g0172051	26.687	1289	759	34	1925	3071	799	2043	1.26e-82	305
Msa1280360	MtrunA17_Chr1g0163891	28.107	2366	1429	65	894	3073	828	3107	0.0	735
Msa1280360	MtrunA17_Chr1g0163891	29.638	2129	1344	58	32	2090	1059	3103	0.0	729

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Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
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Find 554 sgRNAs with CRISPR-Local

Find 1090 sgRNAs with CRISPR-GE

CRISPR-Local

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CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAAAGTGTTAAAGCACCTTG+AGG	0.687457	8_3:+18537002	Msa1280360:CDS
AAAATTGATGTATTGGAGCT+CGG	0.549751	8_3:-18540531	None:intergenic
AAACAAGGAAGAATATAAGA+CGG	0.632665	8_3:-18548161	None:intergenic
AAACAAGGAAGAATATTAGA+TGG	0.398001	8_3:-18546045	None:intergenic
AAACAAGGATGAATATAAGA+TGG	0.506766	8_3:-18539571	None:intergenic
AAACCCATCCTCGATGATTT+TGG	0.129707	8_3:-18549060	None:intergenic
AAACCTAATGAGGTTAAATG+AGG	0.524474	8_3:-18539937	None:intergenic
AAAGATGGTGTTGCTATTGC+AGG	0.359538	8_3:+18537329	Msa1280360:CDS
AAAGTCTTGTCACAGCTTAA+GGG	0.360173	8_3:+18551391	Msa1280360:CDS
AAAGTTGTTTCTTCTACAAC+AGG	0.368057	8_3:+18549655	Msa1280360:CDS

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CRISPR-GE

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sgRNA_sequence	Strand	Position	Region	GC_content
ATTATGACCTACAAAAACTC+TGG	+	chr8_3:18535733-18535752	Msa1280360:CDS	30.0%
GCTTAAAAGAATTGGAAGTT+CGG	+	chr8_3:18535874-18535893	Msa1280360:CDS	30.0%
TTACTGTGAAATATTCACTG+TGG	+	chr8_3:18536265-18536284	Msa1280360:CDS	30.0%
TAATTCCTCCAGAAAAGAAA+TGG	-	chr8_3:18536533-18536552	None:intergenic	30.0%
AACAGGTTTACAAATAAAGG+AGG	+	chr8_3:18536585-18536604	Msa1280360:CDS	30.0%
AATTCGAATGTTCTTTGATG+TGG	+	chr8_3:18536627-18536646	Msa1280360:CDS	30.0%
TTAAATGTTATCAGTTGTCC+TGG	+	chr8_3:18536865-18536884	Msa1280360:CDS	30.0%
TGACAAAGAATCTAGAGATA+TGG	-	chr8_3:18537118-18537137	None:intergenic	30.0%
TATGGCATTTATAACATGCT+AGG	+	chr8_3:18537430-18537449	Msa1280360:intron	30.0%
TAGTTACCATGATTCTAAAC+AGG	+	chr8_3:18537469-18537488	Msa1280360:CDS	30.0%

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Chromosome	Type	Strat	End	Strand	Name
chr8_3	gene	18535708	18551966	18535708	ID=Msa1280360;Name=Msa1280360
chr8_3	mRNA	18535708	18551966	18535708	ID=Msa1280360-mRNA-1;Parent=Msa1280360;Name=Msa1280360-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0\|0.75\|0.38\|0.92\|1\|0.92\|13\|0\|3073
chr8_3	exon	18535708	18536421	18535708	ID=Msa1280360-mRNA-1:exon:7056;Parent=Msa1280360-mRNA-1
chr8_3	exon	18536529	18537350	18536529	ID=Msa1280360-mRNA-1:exon:7057;Parent=Msa1280360-mRNA-1
chr8_3	exon	18537452	18537502	18537452	ID=Msa1280360-mRNA-1:exon:7058;Parent=Msa1280360-mRNA-1
chr8_3	exon	18539421	18540143	18539421	ID=Msa1280360-mRNA-1:exon:7059;Parent=Msa1280360-mRNA-1
chr8_3	exon	18540242	18541078	18540242	ID=Msa1280360-mRNA-1:exon:7060;Parent=Msa1280360-mRNA-1
chr8_3	exon	18541946	18542671	18541946	ID=Msa1280360-mRNA-1:exon:7061;Parent=Msa1280360-mRNA-1
chr8_3	exon	18542771	18543610	18542771	ID=Msa1280360-mRNA-1:exon:7062;Parent=Msa1280360-mRNA-1
chr8_3	exon	18545895	18546620	18545895	ID=Msa1280360-mRNA-1:exon:7063;Parent=Msa1280360-mRNA-1
chr8_3	exon	18546721	18547560	18546721	ID=Msa1280360-mRNA-1:exon:7064;Parent=Msa1280360-mRNA-1
chr8_3	exon	18548011	18548730	18548011	ID=Msa1280360-mRNA-1:exon:7065;Parent=Msa1280360-mRNA-1
chr8_3	exon	18548831	18549676	18548831	ID=Msa1280360-mRNA-1:exon:7066;Parent=Msa1280360-mRNA-1
chr8_3	exon	18549919	18550473	18549919	ID=Msa1280360-mRNA-1:exon:7067;Parent=Msa1280360-mRNA-1
chr8_3	exon	18551145	18551966	18551145	ID=Msa1280360-mRNA-1:exon:7068;Parent=Msa1280360-mRNA-1
chr8_3	CDS	18535708	18536421	18535708	ID=Msa1280360-mRNA-1:cds;Parent=Msa1280360-mRNA-1
chr8_3	CDS	18536529	18537350	18536529	ID=Msa1280360-mRNA-1:cds;Parent=Msa1280360-mRNA-1
chr8_3	CDS	18537452	18537502	18537452	ID=Msa1280360-mRNA-1:cds;Parent=Msa1280360-mRNA-1
chr8_3	CDS	18539421	18540143	18539421	ID=Msa1280360-mRNA-1:cds;Parent=Msa1280360-mRNA-1
chr8_3	CDS	18540242	18541078	18540242	ID=Msa1280360-mRNA-1:cds;Parent=Msa1280360-mRNA-1
chr8_3	CDS	18541946	18542671	18541946	ID=Msa1280360-mRNA-1:cds;Parent=Msa1280360-mRNA-1
chr8_3	CDS	18542771	18543610	18542771	ID=Msa1280360-mRNA-1:cds;Parent=Msa1280360-mRNA-1
chr8_3	CDS	18545895	18546620	18545895	ID=Msa1280360-mRNA-1:cds;Parent=Msa1280360-mRNA-1
chr8_3	CDS	18546721	18547560	18546721	ID=Msa1280360-mRNA-1:cds;Parent=Msa1280360-mRNA-1
chr8_3	CDS	18548011	18548730	18548011	ID=Msa1280360-mRNA-1:cds;Parent=Msa1280360-mRNA-1
chr8_3	CDS	18548831	18549676	18548831	ID=Msa1280360-mRNA-1:cds;Parent=Msa1280360-mRNA-1
chr8_3	CDS	18549919	18550473	18549919	ID=Msa1280360-mRNA-1:cds;Parent=Msa1280360-mRNA-1
chr8_3	CDS	18551145	18551966	18551145	ID=Msa1280360-mRNA-1:cds;Parent=Msa1280360-mRNA-1

Gene Sequence

>Msa1280360

ATGGATGAGATCAGTCTGTCAGAACATTATGACCTACAAAAACTCTGGAATGGTGGCGCTAGTGATATGAAAAAAAGTTTGTTGTACAATTTGAAAACTTTGAGGTTGGAAAACTGTGAAAATCTATCATGTGCAATTCCATCTAATATCTTTCTTTGTCTTAAGAGCTTAAAAGAATTGGAAGTTCGGAATTGTAACAAAGTGGGGGTAATTTTTGAAAAATTTGACAACGATGGAATTCTATCCCAATTGAAGAATTTGACTTTAGAAGGGCTATCAGAATTGAAGCATGTGTGGGGCGAGAATTATCAAGGAAATCTCAAGTTTCAAAATCTGCTACATGTCTCTGTTAGTGATTGTAATGGTCTGAAAATGCTATTTCCAGCTTCCGTAGCCAAAAATATTAAAAAGCTGGAGACACTTCAAATAGAATCTTGTCAAAATTTGACTGAAATTGTTGGCAAGGAAGTACATGTTGCTGCAGATAGAGCAGAATTGTTTGTGTTCCCTTGTTTAACTTCACTTTATCTTTATGACTTGCCAGAGCTCACTTACTTTTACTGTGAAATATTCACTGTGGAATGCCTTGAGTTATGTAAGTTACTGGTGTTGGATTGTTCTAAGTTTGAGCTATTTCAATGTGCACGTCTCGAGGGTGATGGTGAAGGTAGTAGTACTTCAATCAATAGACAACCTCTTTTCTCGAATCTGGAGGCCATTTCTTTTCTGGAGGAATTATCAGTTGATTGGAAACACTCGTCAGTGTTAAGAACAGGTTTACAAATAAAGGAGGACCTCAAATTTTTAAAAGAAATTCGAATGTTCTTTGATGTGGATGATAATGAGAAGCCCACTTTACCCTTCGGTATACTTGATAAGGCACCCAATGTACAAGACTTGAGTATAGAGTGGTGCGAAAGCCTTGAGATATTCCAAACTCCAAACTTCAAAATTAGTGAACAGTTGAAAACATTGACGCTGTTCAGAGTGTCTGAGCCCTGGTCAGAGGATTCATCATGGTTAAACATAGTATCTGAGAAACTCTACAATTTAAATGTTATCAGTTGTCCTGGTTTGACAAAATTATTCCTTTCTCCTGCAGTATCTAACTCCTCCTCCTCCTCTCTGAAAAAATTGTATATTAAAGAATGTCATGGATTAGAGTATTTATTCACATCCTCAGTGACAAAAGTGTTAAAGCACCTTGAGGAGATTGAAGTTAAGGAAAGTCAATTAATTAAAGGAATAGTAGAAATGGAGCAAGATGGAACACCATTCCAAGGGCTCGAGCGGCTATACTCCATATCTCTAGATTCTTTGTCAAGCCTTGAATACTTTTATTCGGGTGATGATACTTTGGAGTTACCATCTCTGGCCCTAGTGAACATTCAACACTGCCCCAGGATGGAGGTTTTCTCTCGAGGAGAGATAAACGCCAAATCTTTTAGAGGAATTCATAATTCGGTTGAACAACATGATGAATTAGTTTTCCACAATGATCTTAACGCCTCAGTAAAGATGGTGTTGCTATTGCAGGTGTATACTGCTTTCCCTAGTTACCATGATTCTAAACAGGGGCGGAGCCAGATGCTCTCTGAAGGCATGTACGGGGAGAACTTTTCAGAATATCCGGAGCTCCAAGAAGCATGGCATGACAGACATAGTCTCCAAAACAATTTATTTTTCAACTTGACAACATTGAAGCTGGTCAATTGTGATATTCAACCGTATGCAGTTCCATCTTATATTCATCCTTGTTTAACGAGTTTGAAAGAACTAGATGTACGGAATTGTAACAAGGTAAAGGTAATTTTTGCTAAGAATGAGACTGAGGCTATTCCAACCAAATTGAAAATTTTGACTCTGGAAGATCTATCTGAACTGACACTTGTTTGGGAGAAGAACTTTCAAGAAATCCTCAAATTTCAAAATCTACAAGAAGTTAGTGTGATAGGTTGTAAAAGAATACAAACTCTATTTCCTGATGTCCTTGCTGAAAATCTAAAAAAGCTCAAGAAACTTGATGTTAAATCTTGTGATGCTTTGCGAGAAATTGTAGGAAAGGAAGACGTAGTAACAGGCTCAGAAAAAAAGTTTCCATTCCCTCATTTAACCTCATTAGGTTTTCAGGAATTGCCATTGTTTACGTACTTTTACCCTGAAATATTTACTGTTGAGTTCCCCAAGTTAAATGTTTTCTATGTTCTGGATTGTCCTAAGTTCGAGCTTTTTCAAGTGGCACATCTGGAGGGTGAGGCTGAAAGCGTTGGTACTAGGATTAATCGACATCCCCTGATCCCAGATCTTAATGCCATTTCCATGGTGGAAGAGCTATCACTCGATTGGAATCACATTTCAGTGGTAAGGTTGGGACAACTTGAGAAAGATCTCAAATATTTGAACCGAGCTAACTTTTACTTTGATGTGGATAAGAATGAGACTCCTTCTTTGCATTTTGGAATACTCGAGAAGGCACCGAATTTACAAGAAATGTTGTTAGGCATGATCAATAGTATTGAGATATTCCTCATAAAAATACCCAAAATCATTGAGCATGGGCTTCTCGTACAGTTGAAAATATTGACATTAAGCACAGTATCCGAGCTCCAATACATCAATTTTGAGAACTCGTGGTTAAACTTGGTCTGTGACAAGCTCCATGAATTAAATGTTATCAATTGTCATGGTTTGATTAAGTTATTCCATTATCCGTCTGCAGTATCTTTCTCCTGTATGAAAGAATTGTATATAAGTGGATGTAATGAGTTGATGTATTTATTCACATCCTCAATGGCAGAGGTGTTAACATCCCTCGAGAAGATCACCGTCACAGAAAGTCAGTCTATTAAAGAAATAGTGGCAAAGGAGCAAAATGGAACATCCGAATGGGTCAAATTTGAGCGGCTAAGCTACATAGATCTAAATTCTTTATCAACTTTGGAATGTTTTTATTCAGGTAATGAGGGTTTGCAGTTACCCTCTCTGAATCAAGTGGACATATGGCAGTGTCCCAACGTGAGAATTTTCTCAAGAGGGGAGATAAATGCTGAATCTTTCAGAGGAATCCAAGCTTCGTCTGATTCAAATGATCAATTGGTGTTCCACAATGATCTTAACGCCTCAGTAAAAAGGGTGTTTCTACTGCAGATGCTTTCTGAAGGTATGGATTGGACGGAAATTTCAAAATATCCCGAGCTACAAGAAGCATGGCATGATGAATTTTGTCTCCAAAACAATATGTTTTACAGCTTGAAAACATTGAAGCTGTACAACTGTGATATCAAACAATATGCAATTCCATCTAATATTCTTCCTTGCTTAAAGAGTTTGAAAGAATTGGAAGTGCGGAATTGTAGCAGAATAGAGGTAATTTTTTCTAAGAATGACACTGAGGCAATTCCATTCCAATTGATCAATTTGACATTGAAAGGGTTACCGGAGCTTAAATTTATATGGGAGAAGAATTCTAAGGGACTCCACAGCTTCCAAAATATGGAACAAGTCAGTGTCAAAAGATGTGAAAGTATATTAACTCTATTTCCTGCAGACCTTGCTGAAAATCTTAAGATGCTCGAGAAACTTAAAATTAAATCTTGTGATCAGTTGCGAGAACTTGTTGGAATGGAAGAAGACGCATCCACAGGATTAATAAAAAAGTTTGTCTTCCCTCGTTTAACATCATTGGATCTTTATATGTTGCCAGAGCTGACTTGGTTTTACTCAGAATTATTCTCGGTGGAGTGCCCCAAGTTAAATGATATCTCAGTGCTGGATTGTCCTAAGTTGGAGCTATTTGAAGGTGCACAGGGTTCGGGTTACATTGAAAGTGCTGGTTCTTCATTTAATAGACAACCACTTTTATCTGACCTTACTGCCTTTTCCATCCTGGAGGAATTATCAGTCGATTGGAAACACATTTCAGTGTTAAGGTTAGGACAACATGCTAAATATTTTAAACATTTGAAGAAAATTTGCTTGTTCTTTGATGCTGATGACAATGAGAAGCCCTCTTTGCCTCTTGAAGTACTTGAGAAGGCCCCAAATTTACAGGAAATTGTCTTAGGGTTGATCAACAGTCTCGAGATATTCCTCACTCAAAACTCCAAATTTAGTGAGCACAGGATTCTTGGACAGTTGAAAATATTGACCATGACAGACATATCTGAGCTCCAATACATCAATTTAGAAGACACATGGTTAGATGCAGTCTGTGAGAATCTGCACAATTTAAAAGTTATGGATTGTCCTAGTATGAAAAAATTATTCCACTCCCCTTGTGCAACATCTTTCACGTGTCTGAAAGAGTTGTATATAAGCGGATGTCATGGGTTGAGGTATTTATTCACATCCTCAATGGCAAAGGTGTTAACGCCCCTTGAGAAGATCACCGTCAAAGAAAGTCAGTCAATTATAGAAATAGTGGCGAAGGATCAAGATGGAACAATTTCACAAGGGCTCAAGTTTGACCGGCTAAGCTACATAGATCTAAATTCTTTATCTAGCTTGGAATGTTTTTATGCAGGCAATGAGAGTTTGCAGTTGCCATCTCTTACTCAAGTGGACATATGGCAGTGTCCCAAGGTGGAAACTTTCTCTCAAGGAGAGATAAATGCAAAATCTTTTAAAGGAATTCAAGCTTCATCTGACTCAAATGATGAACTGGTCTTCCACTATGATCTTAATACCTCCGTAAAAAGGGTATTTCTACTACAGATGCTTTCTGAAGGTATGGATTGGATGGAAATTTCAAAATATCCCGAGCTACAAGAATCATGGCATGATGAATTTTGTCTCCAACACAATATGTTTTACAGCTTGAAAACTTTGAAGCTGTACAACTGTGATATCAAACAATATGCAATTCCATCTAATATTCTTCCTTGTTTAAAGAGTTTGAAAGAATTGGAAGTGCGGAATTGTAGCAGAATAGAGGTAATTTTTTCTAAGAATGACACTGAGGCAATTCCATTCCAATTGATCAATTTGACATTGAAAGGGTTACCGGAGCTTAAATTTATATGGGAGAAGAATTCTAAGGGACTCCACAGCTTCCAAAATATGGAACAAGTCAGTGTCAAAAGATGTGAAAGTATATTAACTCTATTCCCTGCAGACCTTGCTGAAAATCTTAAGATGCTCGAGAAACTTAAAATTAAATCTTGTGATCAGTTGCGAGAACTTGTTGGAATGGAAGAAGAGGCATCCACAGGATTAATAAAAAAGTTTGTCTTCCCTCGTTTAACATCATTGGATCTTTATAAGTTGCCAGAGCTGACTTGGTTTTACTCAGAATTATTCTCGGTGGAGTGCCCCGAGTTAAATGATATCTCAGTGCTGGATTGTCCTAAGTTGGAGCTATTTGAAGGAGCACAGGGTTCAGGTTACACTGAAAGTGCTGGTTCTTCATTTAATAGGCAACCACTTTTATCAGATCTTACTGCCTTTTCCATCCTGGAGGAATTATCACTCGATTGGAAACACATTTCAGTGTTAAGGTTAGGACAACATGCTAAAGATTTCAAATATTTGAAGAAAATTAGCTTGTTCTTTGATGATGATGACAATGAGAAGCTCACTTTGCCTCTTGAAATACTTCAGAAGTCCCCAAATTTACAAGAAATTGTCTTAGGGTTGATAAACAGTCTCGAGATATTCGTCACTACAAACTGCAAATTTAGTGAGCACAAGATTCTTGGACAGTTAAAAATATTGACCATGAGAGATATATCTGAGCTCCAATACATCAATTTAGAGAGTTCATGGTTAAATGTAGTCTGTGAGAAGCTCCATGTTTTAAATGTTAACGATTGTCCTAGTTTGAAAACAATATTCCACTCTCCTTGTGCAACATCTTTCATTTGTCTTAAAGAGTTGAATATAAGCGGGTGTCATGGGTTGAAGTATTTATTTACATCCTCAACGACAAAGGTGTTAATGTCCCTTGAGAAAATCATCGTTAAGGAAAGTAATTCAATTACAGAAATAATTGCAAAAGAGAAAGATGAAACAACTCCTCAACTTATCGAATTTGAGCGGCTATACTGCATAGATCTAAATTCTTTGTCAAACCTTGAATGTTTTTATTCAGGATATGACACTTTCCTGATTCCAGCTCTTACTCAAGTGGATATATGGCAGTGCCCCAAGTTGAAAGTTTTCTCTCGAGGAGAGACAAGTGCTGAATCTTTTGGAGGAATCCAAGCTTCGTCTGATTCAAATGATCAATTGGTGTTCCATAATGATCTTAACGCCTCAGTAAAAAGGGTGTTTCTACTGCAGATGCTCACTAATGGCATGGATGGGAAGAACTTTTCAGAACATCCTGAGCTACAAGAAGCATGGCATGATAGAAATACTCTGGAAAACAATTGGTTTTACAACTTGACTACGATGAAGCTAGTCAATTGTGATATCAAACAATATGCAATTCCGTCTTATATTCTTCCTTGTTTAAAGAGTTTGAAAGAACTAGAAGTACGCAATTGTAACAAGGTAAAGGTAATTTTTGCTAAGAATGACACTGAGGTTATTCCGACCAAATTGAACAATTTGACTCTGGACGGTCTATCCAATCTGACACTAGTTTGGGAGAAGAACTTTCAAGGAATCCTCAAATTTCAAAATCTACAAGAAGTTAGTGTTATAGGTTGTAAAAGTATACAAACTCTATTTCCTGATGTCCTTGCTGAAAATCTAAAAAAGCTCAAGAAACTTGAAGTTAAATCCTGTCATGGGTTGCGAGAAATTGTAGGAAAGGACGATACTGTAATAAGCCCAGAAAAAAAGTTCCTATTCCCTCATTTAATCTCATTAGATTTTTTTAATTTGCCAGATCTCACATACTTTTACCCTGAAATATTTACTGTGGAGTGCCCCAAGTTAAATGAGTTCTCTGTGGTGGATTGTCCTAAGTTGGAGCTATTTCAAGATGCACATCTCGAGTGTGACACTGAAATTGGTACTTCAATTATTAGACAACCCCTGATCCGGGACCTTAATGCCATTTCCATGGTGGAAGAGCTATCACTCAATTTGAAACACATTTCAGTGTTAAAGTTGGGACAACATGTAGAAGATTTCAAAAACTTGAACAAAGCTAACTTGTACTTTGATGTGGATAAGAATGAGAAGCCTTCTGTGCTCTTTGGAATACTTGAGAAGGCACCAAATTTACAATATTTGTGGTTAGGATGCATCAATAGTAATGAGATATTCCTCATACCAAATCCCAAAATCATCGAGGATGGGTTTCTTGGACGGTTGAAAATATTGAAACTGTACTTGGTATCTGAGCTCCGATACATCAATTTAGAACACTCATGGTTAGATGCAGTCTGTGAGAAGCTGCACAATTTAAATGTTACAAATTGTCACGGTTTGAATAAGTTATTCCGTTATCCATCTGCAGTATCCTTCTCCTGTATGAGAGAACTGTATATAAGTGTATGTCATGGCTTGAGATATTTATTCAGATCCTCTGTGGCAAATCTGTTAACATCCCTCGAGAAGATCACCGTCACAGAAAGTAAGTCAATTATATGTATAGTGGCACAGGAGCTAGATGAAACAACTGATCAAGGGGTCAAATTTGAGCGGCTGTGCTACATATATCTAAATTCTTTATCAAGCCTGGAGTGTTTTTATTCTGGCAATGGGTGTTTGCAGTTGCCGTCTCTGACTGAAGCGTACATATGGAAGTGTCCAAAGATGAAAATTTTCTCTCGAGGGGAGATAAACGCTGAATCTTTTAGAGGAATCCAAGCTTTGTCCGATTCAAATGATCAGTTGGTCTTGTACAATGATGATCTTAACGCTTCGGTAGAAAAGTTGTTTCTTCTACAACAGGATCATTTAGTTTTTGAGGACTCTCCTTTGTTGAAATTGATTTGGCTCAAGTCAGAGACTGTCCCGGACTGGTGTTTCTGCAATTTAATTTCTTTGGTTGTGGATGGGTGTGAATTTTTAACAGATGCGGTACTACCTTCTCATTTACTTCCTTTCCTAAGTAAACTGAAAACACTGGAAGTGCGGAACTGTAATTCTATTAAGGCAATATTTGTTAATACAAAGATTGGACCTCAAGGAACTCTTGGCCTTCCATTGCTGAAAAAGCTATGGGTGGAAAACTGTAAAAAATTACTGGAGATTGTTGCAAAGAAAGAAATAGCCACCGAAGAAGCAAATGAACTGATTACTCTTTTCCCAATGATAACAATTTTGAAGTTACGGATTTTACACAATCTGAAGTGCATTTATCCTGGGGTGCGCATTCTAGAGTGGCCTACGTTGAAAGAATTACATGTTACACATTGTCCCAAGCTGAAATTTTTTGAAACAGAATTTCAAAGTTCTCGATATAGTTTTCCATCAACCCGGCAAGCCTTTGTCTCGCTTGATAAGGTTACTCCGAGCCTGAATGTGCTGACACTTGGTAAGTTAGAAGCAAAGATGATTGATCAAGGAAAACTTCATGTTGATCTCCAAGAATTAAACACCCTCAGATTGCCGTGCTTTCATGATAAAACAGATGTCTATCCATTTGTTTTTCATTCAAAGGCGGCACTACCCGGTACGAAATACCTTGTGGTGCGACATAGTGCCTTCAAAGAGATATTCCCCTCTCAAACACCTGACGTTGACTGTACTAAAGTCTTGTCACAGCTTAAGGGATTGGAGCTTCATAGTCTCCCCCAGCTTGAATCCATAGGATTTGAACGCTCCTGGGTAGGCCCGTTCATTGAAAATCTTCAAACCATAAATGTTTGGTATTGTTCCCGTTTGAGAAACTTGACACCATCCATTGTGTCTTTCTCCAAACTGAAAAGGCTTGATGTAAAAGATTGTGGCAGATTGAAATACTTGTTCACATCCTCTACTGCCAAAACTTTGAGCGTACTGAAAGAGATGAAGCTAGTCAATTGTGAATCAATAATAGAAATTGTGGCTAAAGAGGAAGATGAACCAAATGAAGGTGAGATTCTATTCACGGAGCTTAGTATTGTGACTCTTGGCTCGTTACCTAAGCTTGAAAGCTTTTACTCGGAGAGTTTCACTTTGAATTTCTCATCCTTGAAAGAAGTGTCATTCACGCAATGCAACACCACAAAAGTTTTCCGTGTTGGTGATAAAGTACCAGATGAATTGAAGGTGACAATAGATGGAGTCTTTTGGGAAGGTGACACAAAAGAAGTAATCATGCAACAGATTGATGAGGCAACCTGA

Protein sequence

>Msa1280360

MDEISLSEHYDLQKLWNGGASDMKKSLLYNLKTLRLENCENLSCAIPSNIFLCLKSLKELEVRNCNKVGVIFEKFDNDGILSQLKNLTLEGLSELKHVWGENYQGNLKFQNLLHVSVSDCNGLKMLFPASVAKNIKKLETLQIESCQNLTEIVGKEVHVAADRAELFVFPCLTSLYLYDLPELTYFYCEIFTVECLELCKLLVLDCSKFELFQCARLEGDGEGSSTSINRQPLFSNLEAISFLEELSVDWKHSSVLRTGLQIKEDLKFLKEIRMFFDVDDNEKPTLPFGILDKAPNVQDLSIEWCESLEIFQTPNFKISEQLKTLTLFRVSEPWSEDSSWLNIVSEKLYNLNVISCPGLTKLFLSPAVSNSSSSSLKKLYIKECHGLEYLFTSSVTKVLKHLEEIEVKESQLIKGIVEMEQDGTPFQGLERLYSISLDSLSSLEYFYSGDDTLELPSLALVNIQHCPRMEVFSRGEINAKSFRGIHNSVEQHDELVFHNDLNASVKMVLLLQVYTAFPSYHDSKQGRSQMLSEGMYGENFSEYPELQEAWHDRHSLQNNLFFNLTTLKLVNCDIQPYAVPSYIHPCLTSLKELDVRNCNKVKVIFAKNETEAIPTKLKILTLEDLSELTLVWEKNFQEILKFQNLQEVSVIGCKRIQTLFPDVLAENLKKLKKLDVKSCDALREIVGKEDVVTGSEKKFPFPHLTSLGFQELPLFTYFYPEIFTVEFPKLNVFYVLDCPKFELFQVAHLEGEAESVGTRINRHPLIPDLNAISMVEELSLDWNHISVVRLGQLEKDLKYLNRANFYFDVDKNETPSLHFGILEKAPNLQEMLLGMINSIEIFLIKIPKIIEHGLLVQLKILTLSTVSELQYINFENSWLNLVCDKLHELNVINCHGLIKLFHYPSAVSFSCMKELYISGCNELMYLFTSSMAEVLTSLEKITVTESQSIKEIVAKEQNGTSEWVKFERLSYIDLNSLSTLECFYSGNEGLQLPSLNQVDIWQCPNVRIFSRGEINAESFRGIQASSDSNDQLVFHNDLNASVKRVFLLQMLSEGMDWTEISKYPELQEAWHDEFCLQNNMFYSLKTLKLYNCDIKQYAIPSNILPCLKSLKELEVRNCSRIEVIFSKNDTEAIPFQLINLTLKGLPELKFIWEKNSKGLHSFQNMEQVSVKRCESILTLFPADLAENLKMLEKLKIKSCDQLRELVGMEEDASTGLIKKFVFPRLTSLDLYMLPELTWFYSELFSVECPKLNDISVLDCPKLELFEGAQGSGYIESAGSSFNRQPLLSDLTAFSILEELSVDWKHISVLRLGQHAKYFKHLKKICLFFDADDNEKPSLPLEVLEKAPNLQEIVLGLINSLEIFLTQNSKFSEHRILGQLKILTMTDISELQYINLEDTWLDAVCENLHNLKVMDCPSMKKLFHSPCATSFTCLKELYISGCHGLRYLFTSSMAKVLTPLEKITVKESQSIIEIVAKDQDGTISQGLKFDRLSYIDLNSLSSLECFYAGNESLQLPSLTQVDIWQCPKVETFSQGEINAKSFKGIQASSDSNDELVFHYDLNTSVKRVFLLQMLSEGMDWMEISKYPELQESWHDEFCLQHNMFYSLKTLKLYNCDIKQYAIPSNILPCLKSLKELEVRNCSRIEVIFSKNDTEAIPFQLINLTLKGLPELKFIWEKNSKGLHSFQNMEQVSVKRCESILTLFPADLAENLKMLEKLKIKSCDQLRELVGMEEEASTGLIKKFVFPRLTSLDLYKLPELTWFYSELFSVECPELNDISVLDCPKLELFEGAQGSGYTESAGSSFNRQPLLSDLTAFSILEELSLDWKHISVLRLGQHAKDFKYLKKISLFFDDDDNEKLTLPLEILQKSPNLQEIVLGLINSLEIFVTTNCKFSEHKILGQLKILTMRDISELQYINLESSWLNVVCEKLHVLNVNDCPSLKTIFHSPCATSFICLKELNISGCHGLKYLFTSSTTKVLMSLEKIIVKESNSITEIIAKEKDETTPQLIEFERLYCIDLNSLSNLECFYSGYDTFLIPALTQVDIWQCPKLKVFSRGETSAESFGGIQASSDSNDQLVFHNDLNASVKRVFLLQMLTNGMDGKNFSEHPELQEAWHDRNTLENNWFYNLTTMKLVNCDIKQYAIPSYILPCLKSLKELEVRNCNKVKVIFAKNDTEVIPTKLNNLTLDGLSNLTLVWEKNFQGILKFQNLQEVSVIGCKSIQTLFPDVLAENLKKLKKLEVKSCHGLREIVGKDDTVISPEKKFLFPHLISLDFFNLPDLTYFYPEIFTVECPKLNEFSVVDCPKLELFQDAHLECDTEIGTSIIRQPLIRDLNAISMVEELSLNLKHISVLKLGQHVEDFKNLNKANLYFDVDKNEKPSVLFGILEKAPNLQYLWLGCINSNEIFLIPNPKIIEDGFLGRLKILKLYLVSELRYINLEHSWLDAVCEKLHNLNVTNCHGLNKLFRYPSAVSFSCMRELYISVCHGLRYLFRSSVANLLTSLEKITVTESKSIICIVAQELDETTDQGVKFERLCYIYLNSLSSLECFYSGNGCLQLPSLTEAYIWKCPKMKIFSRGEINAESFRGIQALSDSNDQLVLYNDDLNASVEKLFLLQQDHLVFEDSPLLKLIWLKSETVPDWCFCNLISLVVDGCEFLTDAVLPSHLLPFLSKLKTLEVRNCNSIKAIFVNTKIGPQGTLGLPLLKKLWVENCKKLLEIVAKKEIATEEANELITLFPMITILKLRILHNLKCIYPGVRILEWPTLKELHVTHCPKLKFFETEFQSSRYSFPSTRQAFVSLDKVTPSLNVLTLGKLEAKMIDQGKLHVDLQELNTLRLPCFHDKTDVYPFVFHSKAALPGTKYLVVRHSAFKEIFPSQTPDVDCTKVLSQLKGLELHSLPQLESIGFERSWVGPFIENLQTINVWYCSRLRNLTPSIVSFSKLKRLDVKDCGRLKYLFTSSTAKTLSVLKEMKLVNCESIIEIVAKEEDEPNEGEILFTELSIVTLGSLPKLESFYSESFTLNFSSLKEVSFTQCNTTKVFRVGDKVPDELKVTIDGVFWEGDTKEVIMQQIDEAT*