AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene011054


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene011054.t1 MTR_8g014260 53.846 442 173 10 16 431 15 451 2.23e-134 394
MS.gene011054.t1 MTR_8g445780 48.232 396 182 7 10 390 6 393 9.47e-98 298
MS.gene011054.t1 MTR_4g024710 55.326 291 123 5 146 431 59 347 1.13e-91 281
MS.gene011054.t1 MTR_4g024745 52.098 286 128 6 134 414 3 284 8.85e-77 240
MS.gene011054.t1 MTR_8g467800 39.341 455 227 17 11 431 14 453 4.29e-70 229
MS.gene011054.t1 MTR_8g077460 38.673 437 189 12 10 431 3 375 1.55e-69 225
MS.gene011054.t1 MTR_8g468810 37.768 466 236 17 8 431 10 463 4.34e-69 226
MS.gene011054.t1 MTR_2g083840 38.926 447 231 16 17 431 21 457 2.58e-67 221
MS.gene011054.t1 MTR_8g058970 38.413 479 224 19 10 431 13 477 3.64e-66 219
MS.gene011054.t1 MTR_5g092960 36.980 457 242 15 11 430 14 461 2.18e-64 214
MS.gene011054.t1 MTR_8g062270 38.085 449 232 17 17 430 16 453 8.06e-64 212
MS.gene011054.t1 MTR_8g014210 50.862 232 110 2 202 431 2 231 3.63e-62 201
MS.gene011054.t1 MTR_8g014160 36.996 446 191 14 16 431 40 425 1.07e-61 206
MS.gene011054.t1 MTR_4g032730 35.551 481 238 19 7 430 1 466 2.83e-59 201
MS.gene011054.t1 MTR_8g468840 36.384 448 239 18 15 428 12 447 2.83e-58 197
MS.gene011054.t1 MTR_8g468760 34.279 458 223 16 10 430 2 418 1.04e-51 179
MS.gene011054.t1 MTR_8g058965 34.188 468 247 22 10 431 4 456 1.25e-48 172
MS.gene011054.t1 MTR_8g469020 33.114 456 253 20 17 431 7 451 1.31e-47 169
MS.gene011054.t1 MTR_8g062310 33.949 433 239 19 17 431 25 428 2.61e-47 168
MS.gene011054.t1 MTR_8g062010 32.473 465 233 20 11 431 3 430 1.73e-46 166
MS.gene011054.t1 MTR_8g070950 31.965 463 226 21 16 431 14 434 3.12e-44 160
MS.gene011054.t1 MTR_8g468810 35.200 375 198 14 8 348 10 373 1.70e-43 156
MS.gene011054.t1 MTR_8g062080 32.080 452 249 20 13 431 19 445 2.13e-42 155
MS.gene011054.t1 MTR_8g467800 41.290 310 143 14 11 295 14 309 6.54e-41 149
MS.gene011054.t1 MTR_8g468810 36.562 320 165 11 8 298 10 320 2.73e-40 147
MS.gene011054.t1 MTR_8g468810 36.508 315 164 10 8 295 10 315 5.59e-40 145
MS.gene011054.t1 MTR_8g468810 36.508 315 164 10 8 295 10 315 1.06e-39 145
MS.gene011054.t1 MTR_5g092960 35.326 368 198 13 11 347 14 372 6.63e-37 139
MS.gene011054.t1 MTR_8g062300 30.851 470 252 21 17 431 26 477 5.30e-36 138
MS.gene011054.t1 MTR_5g021550 51.370 146 58 7 7 145 11 150 7.22e-32 119
MS.gene011054.t1 MTR_8g014230 57.609 92 36 2 342 431 14 104 3.70e-28 107
MS.gene011054.t1 MTR_4g050250 29.356 419 236 18 10 379 12 419 5.91e-28 115
MS.gene011054.t1 MTR_8g014290 44.079 152 62 7 10 145 3 147 2.62e-24 99.0
MS.gene011054.t1 MTR_5g084070 28.146 437 254 18 17 423 13 419 1.40e-21 96.7
MS.gene011054.t1 MTR_4g024720 39.286 196 96 9 11 190 13 201 4.11e-21 91.3
MS.gene011054.t1 MTR_3g108150 26.503 449 238 18 8 430 4 386 5.63e-21 94.4
MS.gene011054.t1 MTR_2g086020 45.614 114 57 3 323 431 202 315 6.15e-20 90.5
MS.gene011054.t1 MTR_5g008950 26.559 433 230 17 19 431 1 365 7.05e-20 91.3
MS.gene011054.t1 MTR_7g056430 28.537 417 224 14 15 423 7 357 7.77e-19 89.7
MS.gene011054.t1 MTR_7g056420 28.537 417 224 14 15 423 7 357 9.65e-19 89.4
MS.gene011054.t1 MTR_5g073420 28.571 441 227 18 12 430 5 379 2.96e-18 86.3
MS.gene011054.t1 MTR_4g056040 26.484 438 242 17 17 390 9 430 1.02e-17 85.5
MS.gene011054.t1 MTR_4g080787 27.918 437 251 19 11 401 13 431 6.71e-17 83.2
MS.gene011054.t1 MTR_5g080710 25.877 456 272 19 4 423 21 446 1.84e-15 78.6
MS.gene011054.t1 MTR_4g056020 26.961 408 248 14 17 390 9 400 2.81e-15 77.8
MS.gene011054.t1 MTR_4g056070 28.698 338 187 14 87 387 117 437 5.53e-15 77.0
MS.gene011054.t1 MTR_1g038710 26.107 429 253 17 17 401 19 427 8.88e-15 76.3
MS.gene011054.t1 MTR_4g055990 28.796 382 210 16 87 425 114 476 8.65e-14 73.6
MS.gene011054.t1 MTR_4g055990 28.796 382 210 16 87 425 114 476 1.20e-13 73.2
MS.gene011054.t1 MTR_4g024770 57.692 52 21 1 16 67 23 73 4.35e-13 64.7
MS.gene011054.t1 MTR_7g007340 34.375 192 98 10 8 193 4 173 8.68e-13 69.7
MS.gene011054.t1 MTR_4g080590 26.471 442 276 19 15 425 21 444 8.91e-13 70.1
MS.gene011054.t1 MTR_3g115430 35.455 110 62 4 327 431 20 125 4.76e-12 63.2
MS.gene011054.t1 MTR_1g067190 26.027 292 194 9 6 293 4 277 8.00e-12 66.6
MS.gene011054.t1 MTR_4g051640 48.611 72 35 2 15 86 28 97 1.13e-11 63.2
MS.gene011054.t1 MTR_1g041245 31.053 190 107 6 17 191 11 191 1.56e-11 65.9
MS.gene011054.t1 MTR_1g041245 38.532 109 60 2 330 431 278 386 2.33e-11 65.5
MS.gene011054.t1 MTR_7g098510 35.455 110 66 2 327 431 282 391 1.99e-11 65.9
MS.gene011054.t1 MTR_4g092430 33.803 142 72 5 16 137 42 181 2.55e-11 65.9
MS.gene011054.t1 MTR_4g092430 33.803 142 72 5 16 137 42 181 3.28e-11 65.5
MS.gene011054.t1 MTR_7g032380 34.483 116 71 2 17 132 11 121 4.87e-11 64.3
MS.gene011054.t1 MTR_3g036320 24.259 371 227 14 5 340 10 361 5.80e-11 64.3
MS.gene011054.t1 MTR_8g014180 69.565 46 10 2 10 55 13 54 7.34e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene011054.t1 AT4G26340 30.337 445 253 19 17 431 2 419 2.28e-35 135
MS.gene011054.t1 AT3G49030 29.530 447 257 15 16 430 20 440 7.79e-31 123
MS.gene011054.t1 AT4G26350 28.035 453 262 19 17 431 2 428 9.74e-27 111
MS.gene011054.t1 AT3G49030 27.854 438 250 13 16 430 20 414 1.66e-26 110
MS.gene011054.t1 AT5G56420 27.517 447 264 20 16 431 5 422 4.93e-25 106
MS.gene011054.t1 AT5G56420 27.517 447 264 20 16 431 5 422 4.93e-25 106
MS.gene011054.t1 AT5G56420 27.517 447 264 20 16 431 5 422 4.93e-25 106
MS.gene011054.t1 AT3G50710 27.803 446 271 17 17 431 2 427 3.17e-24 104
MS.gene011054.t1 AT4G13965 27.438 441 267 18 17 431 10 423 5.51e-24 103
MS.gene011054.t1 AT4G10400 25.629 437 272 16 17 430 2 408 5.97e-24 103
MS.gene011054.t1 AT4G10400 25.629 437 272 16 17 430 2 408 5.97e-24 103
MS.gene011054.t1 AT4G10400 25.629 437 272 16 17 430 2 408 5.97e-24 103
MS.gene011054.t1 AT5G56820 26.096 456 262 17 11 430 9 425 2.16e-22 99.4
MS.gene011054.t1 AT1G66290 24.783 460 283 20 8 429 17 451 1.09e-21 97.4
MS.gene011054.t1 AT5G56380 27.074 458 271 17 17 431 2 439 1.43e-21 97.1
MS.gene011054.t1 AT5G56380 27.074 458 271 17 17 431 2 439 1.43e-21 97.1
MS.gene011054.t1 AT5G22730 27.451 459 267 20 16 429 27 464 6.32e-21 95.1
MS.gene011054.t1 AT5G22730 27.451 459 267 20 16 429 27 464 6.32e-21 95.1
MS.gene011054.t1 AT3G52680 28.884 457 251 23 16 430 20 444 8.81e-21 94.7
MS.gene011054.t1 AT4G00160 28.062 449 267 18 16 430 15 441 1.21e-20 94.4
MS.gene011054.t1 AT2G26860 26.619 417 258 14 17 404 2 399 1.36e-20 93.6
MS.gene011054.t1 AT2G26860 26.619 417 258 14 17 404 2 399 1.36e-20 93.6
MS.gene011054.t1 AT5G60610 27.251 422 235 18 17 402 2 387 5.30e-20 91.7
MS.gene011054.t1 AT5G60610 27.251 422 235 18 17 402 2 387 5.30e-20 91.7
MS.gene011054.t1 AT2G04230 26.170 470 258 18 16 431 12 446 1.14e-19 91.3
MS.gene011054.t1 AT1G69630 26.432 454 271 18 17 429 18 449 6.06e-19 89.0
MS.gene011054.t1 AT5G56440 26.350 463 257 17 17 430 2 429 1.05e-18 88.2
MS.gene011054.t1 AT5G50270 26.526 426 265 16 17 413 2 408 2.54e-18 87.0
MS.gene011054.t1 AT1G22000 25.738 474 267 17 4 429 14 450 2.54e-18 87.4
MS.gene011054.t1 AT5G56370 25.885 452 264 16 17 430 2 420 2.68e-18 87.0
MS.gene011054.t1 AT5G56370 25.885 452 264 16 17 430 2 420 2.68e-18 87.0
MS.gene011054.t1 AT5G38590 27.119 413 247 15 17 403 2 386 4.86e-18 86.3
MS.gene011054.t1 AT5G53840 24.717 441 294 18 12 429 13 438 1.22e-17 85.1
MS.gene011054.t1 AT3G26930 27.473 455 260 17 16 431 20 443 1.77e-17 84.7
MS.gene011054.t1 AT5G27750 24.190 463 293 14 17 431 5 457 2.70e-17 84.3
MS.gene011054.t1 AT5G22610 26.872 454 264 19 11 428 12 433 2.76e-17 84.3
MS.gene011054.t1 AT5G44950 25.652 460 270 19 16 429 3 436 5.74e-17 83.2
MS.gene011054.t1 AT1G51370 29.075 454 244 25 16 429 18 433 6.91e-17 82.8
MS.gene011054.t1 AT5G56400 26.503 449 270 19 17 431 33 455 1.13e-16 82.4
MS.gene011054.t1 AT5G22610 26.667 465 281 19 11 428 12 463 1.17e-16 82.4
MS.gene011054.t1 AT5G53635 26.222 450 268 18 19 430 2 425 1.22e-16 82.0
MS.gene011054.t1 AT3G26922 31.290 310 172 14 13 300 9 299 2.09e-16 80.1
MS.gene011054.t1 AT3G26922 31.290 310 172 14 13 300 9 299 2.09e-16 80.1
MS.gene011054.t1 AT5G56560 24.550 444 278 14 16 431 4 418 5.56e-16 80.1
MS.gene011054.t1 AT5G22660 25.828 453 275 17 16 428 12 443 8.56e-16 79.7
MS.gene011054.t1 AT3G59200 28.000 275 154 11 17 263 7 265 8.96e-16 79.0
MS.gene011054.t1 AT3G59200 28.000 275 154 11 17 263 7 265 1.48e-15 79.0
MS.gene011054.t1 AT5G38570 25.532 423 257 16 17 430 2 375 1.67e-15 78.2
MS.gene011054.t1 AT3G26922 31.987 297 162 14 13 300 9 274 1.72e-15 77.0
MS.gene011054.t1 AT5G41840 27.461 386 201 15 17 340 14 382 2.02e-15 78.6
MS.gene011054.t1 AT3G58880 26.545 437 265 14 17 410 3 426 2.62e-15 78.2
MS.gene011054.t1 AT1G78760 25.000 444 286 15 16 429 15 441 3.93e-15 77.4
MS.gene011054.t1 AT3G49020 26.862 443 279 19 16 431 21 445 3.97e-15 77.4
MS.gene011054.t1 AT4G14103 28.418 373 212 17 13 347 4 359 7.29e-15 76.6
MS.gene011054.t1 AT5G62970 25.053 471 272 17 17 430 2 448 8.60e-15 76.6
MS.gene011054.t1 AT5G35995 25.105 474 277 16 14 430 2 454 9.27e-15 76.3
MS.gene011054.t1 AT5G35995 25.105 474 277 16 14 430 2 454 9.27e-15 76.3
MS.gene011054.t1 AT4G14103 28.455 369 209 17 13 343 4 355 2.24e-14 74.7
MS.gene011054.t1 AT4G14103 28.455 369 209 17 13 343 4 355 2.24e-14 74.7
MS.gene011054.t1 AT5G56390 24.009 454 274 14 17 430 2 424 3.89e-14 74.3
MS.gene011054.t1 AT1G66310 25.000 436 290 13 17 429 19 440 5.27e-14 73.9
MS.gene011054.t1 AT5G18770 26.316 456 274 20 16 428 23 459 6.29e-14 73.9
MS.gene011054.t1 AT3G51530 24.726 457 271 15 16 431 29 453 1.42e-13 72.8
MS.gene011054.t1 AT5G44490 25.771 454 279 19 16 429 16 451 1.76e-13 72.4
MS.gene011054.t1 AT5G44490 25.771 454 279 19 16 429 16 451 1.79e-13 72.4
MS.gene011054.t1 AT3G52680 29.014 355 192 18 16 342 20 342 2.05e-13 71.6
MS.gene011054.t1 AT1G13780 24.009 454 294 18 17 429 10 453 4.81e-13 71.2
MS.gene011054.t1 AT3G60040 24.938 405 248 15 16 384 12 396 5.33e-13 71.2
MS.gene011054.t1 AT5G22730 28.862 246 142 10 16 237 27 263 5.90e-13 70.5
MS.gene011054.t1 AT5G38590 30.417 240 133 9 17 237 2 226 7.15e-13 69.3
MS.gene011054.t1 AT3G60040 24.938 405 248 15 16 384 229 613 9.94e-13 70.5
MS.gene011054.t1 AT1G16930 23.602 483 283 19 1 431 1 449 1.00e-12 70.1
MS.gene011054.t1 AT1G16930 23.602 483 283 19 1 431 1 449 1.00e-12 70.1
MS.gene011054.t1 AT1G16930 23.602 483 283 19 1 431 1 449 1.00e-12 70.1
MS.gene011054.t1 AT3G60040 24.938 405 248 15 16 384 231 615 1.02e-12 70.5
MS.gene011054.t1 AT3G60040 24.938 405 248 15 16 384 231 615 1.09e-12 70.5
MS.gene011054.t1 AT3G60040 24.938 405 248 15 16 384 232 616 1.17e-12 70.5
MS.gene011054.t1 AT1G66320 23.918 439 276 18 27 429 39 455 1.20e-12 69.7
MS.gene011054.t1 AT5G44980 25.109 458 273 20 16 430 3 433 1.57e-12 69.3
MS.gene011054.t1 AT5G44980 25.109 458 273 20 16 430 3 433 1.57e-12 69.3
MS.gene011054.t1 AT1G55660 24.406 463 277 22 17 430 53 491 3.44e-12 68.6
MS.gene011054.t1 AT5G22700 26.263 396 234 16 17 375 6 380 4.61e-12 68.2
MS.gene011054.t1 AT5G22700 26.263 396 234 16 17 375 6 380 4.61e-12 68.2
MS.gene011054.t1 AT5G22700 26.263 396 234 16 17 375 6 380 4.61e-12 68.2
MS.gene011054.t1 AT5G22700 26.263 396 234 16 17 375 6 380 4.61e-12 68.2
MS.gene011054.t1 AT5G22700 26.263 396 234 16 17 375 43 417 5.21e-12 67.8
MS.gene011054.t1 AT1G05080 26.134 463 268 18 11 430 7 438 5.80e-12 67.8
MS.gene011054.t1 AT1G51370 28.354 395 211 22 16 374 18 376 7.85e-12 67.0
MS.gene011054.t1 AT5G56410 25.166 453 278 17 17 425 2 437 8.18e-12 67.4
MS.gene011054.t1 AT1G66300 23.009 452 300 17 10 430 21 455 1.62e-11 66.2
MS.gene011054.t1 AT3G49480 26.364 440 243 19 11 402 6 412 2.09e-11 65.9
MS.gene011054.t1 AT3G58900 25.959 443 249 16 17 401 2 423 2.32e-11 65.9
MS.gene011054.t1 AT1G55660 26.860 242 149 11 17 239 53 285 2.58e-11 65.5
MS.gene011054.t1 AT5G50270 27.419 248 146 10 17 242 2 237 4.54e-11 63.9
MS.gene011054.t1 AT5G22720 25.053 471 269 22 16 430 22 464 5.77e-11 64.7
MS.gene011054.t1 AT4G27050 27.122 483 249 26 17 430 4 452 7.02e-11 64.3
MS.gene011054.t1 AT4G27050 27.122 483 249 26 17 430 4 452 7.02e-11 64.3
MS.gene011054.t1 AT4G27050 27.122 483 249 26 17 430 4 452 7.02e-11 64.3
MS.gene011054.t1 AT4G27050 27.122 483 249 26 17 430 4 452 7.02e-11 64.3
MS.gene011054.t1 AT4G27050 27.122 483 249 26 17 430 4 452 7.02e-11 64.3
MS.gene011054.t1 AT3G26922 28.920 287 165 12 35 300 2 270 9.20e-11 62.8
MS.gene011054.t1 AT3G26922 28.920 287 165 12 35 300 2 270 9.20e-11 62.8

Find 95 sgRNAs with CRISPR-Local

Find 231 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCGTGTCAATTCAGTTTA+TGG 0.168165 8.3:-74321915 MS.gene011054:CDS
CTTCTCGCTGGCGGCATCTT+TGG 0.184792 8.3:-74322097 MS.gene011054:CDS
CTGTGGATCCCATCCTAAAA+TGG 0.225518 8.3:+74318870 None:intergenic
TTGGCCTCTATCGAATTTAA+AGG 0.246775 8.3:-74318817 MS.gene011054:CDS
TCAAAATTGTCCTAAGCTTC+AGG 0.325849 8.3:-74319037 MS.gene011054:CDS
GCATCTTTGGAAGCGTCTTC+AGG 0.340880 8.3:-74322084 MS.gene011054:CDS
TACTCTGTTATCAACGACTA+TGG 0.341595 8.3:-74321939 MS.gene011054:CDS
CGGAATGGTGATTGGGTAAT+GGG 0.349347 8.3:+74320136 None:intergenic
AGAGACGGAGGTCGAGTTCC+TGG 0.370251 8.3:+74321862 None:intergenic
ATCGAATTTAAAGGATTTCA+AGG 0.370652 8.3:-74318808 MS.gene011054:CDS
TCAAATATGCCAAGGGCCTC+TGG 0.389596 8.3:-74318670 MS.gene011054:CDS
GGTTGGATTATCGCCGTCAT+TGG 0.404527 8.3:-74321894 MS.gene011054:CDS
GATGAGGTGCATTAATTTCA+AGG 0.406719 8.3:+74320170 None:intergenic
AACGAAAACACTGAATCTAT+TGG 0.416144 8.3:+74322028 None:intergenic
TGTGGATCCCATCCTAAAAT+GGG 0.430201 8.3:+74318871 None:intergenic
CTTCTACTGCAGCATCATAA+AGG 0.436950 8.3:+74320266 None:intergenic
AAATCCTTTAAATTCGATAG+AGG 0.443135 8.3:+74318813 None:intergenic
TCAACAAATTCCATCTCATC+TGG 0.451148 8.3:+74318781 None:intergenic
ACCTCCTCGACGCCCTCTCC+AGG 0.456333 8.3:-74320021 MS.gene011054:CDS
GACACTGATTATCTCTGATC+TGG 0.456612 8.3:-74318728 MS.gene011054:CDS
CCTCAAAATTCAATGTGAAA+AGG 0.456622 8.3:-74319013 MS.gene011054:intron
ACGGAATGGTGATTGGGTAA+TGG 0.464210 8.3:+74320135 None:intergenic
CAAGTGGGATACGAGACAAT+TGG 0.465078 8.3:+74318837 None:intergenic
AAACATCACGGAATGGTGAT+TGG 0.473011 8.3:+74320128 None:intergenic
CGTCATTGGAGCTGTTCTCC+AGG 0.485313 8.3:-74321880 MS.gene011054:CDS
AAGTGGGATACGAGACAATT+GGG 0.488447 8.3:+74318838 None:intergenic
CATCTCAGTCAAATAGAAGT+TGG 0.498714 8.3:+74318641 None:intergenic
CTTGACGGAAGGGTGAAGTC+AGG 0.500444 8.3:+74321819 None:intergenic
AACATCACGGAATGGTGATT+GGG 0.501399 8.3:+74320129 None:intergenic
GTGTCAATTCAGTTTATGGT+TGG 0.508399 8.3:-74321911 MS.gene011054:CDS
TGGCACATTCCAGAGGCCCT+TGG 0.520229 8.3:+74318661 None:intergenic
GTATAACTTGCATGATGTGC+TGG 0.523758 8.3:-74320098 MS.gene011054:CDS
TTTAGAGCTCATGCTACCCT+CGG 0.527579 8.3:-74319088 MS.gene011054:intron
CAAAACTAGATGTTTAGTCC+TGG 0.529825 8.3:+74320003 None:intergenic
TCAAGGATTACCAGATGAGA+TGG 0.532915 8.3:-74318791 MS.gene011054:CDS
CAATTGTCTCGTATCCCACT+TGG 0.537114 8.3:-74318836 MS.gene011054:CDS
AGATCGGATTAGTGCTATAC+CGG 0.537689 8.3:-74322189 MS.gene011054:CDS
TAATGTCGCGAGGACGATCA+CGG 0.539594 8.3:+74321985 None:intergenic
TAACATTCACTCTCCTCAAG+TGG 0.541733 8.3:-74320344 MS.gene011054:CDS
GAATGTCATACTTCTTACTC+TGG 0.544482 8.3:+74318704 None:intergenic
ACGAGACAATTGGGATCACT+TGG 0.554217 8.3:+74318847 None:intergenic
AAAGATTATCAAATATGCCA+AGG 0.557773 8.3:-74318678 MS.gene011054:CDS
TTTCTTCTTCCGGTGGAATG+TGG 0.558506 8.3:+74322222 None:intergenic
AAGAAAACGGAGTAGAAGAT+CGG 0.561955 8.3:-74322205 MS.gene011054:CDS
ATTCCACCGGAAGAAGAAAA+CGG 0.563172 8.3:-74322218 MS.gene011054:CDS
TCTGTGAATGCACTCCTATG+TGG 0.565897 8.3:-74320319 MS.gene011054:CDS
ATGAGGTGCATTAATTTCAA+GGG 0.568681 8.3:+74320171 None:intergenic
AACACTGAATCTATTGGCCG+AGG 0.572569 8.3:+74322034 None:intergenic
TTGTTGAGTAGAACATCGTC+CGG 0.574769 8.3:+74322170 None:intergenic
AAGCAAGTACAGTAGAGCAT+TGG 0.578214 8.3:+74319059 None:intergenic
CAATTGGGATCACTTGGCTG+TGG 0.578716 8.3:+74318853 None:intergenic
CTGCGACGAGTCTTTCGCCT+CGG 0.578994 8.3:-74322051 MS.gene011054:CDS
GTAAACAAATTGCTTTAGAG+AGG 0.581757 8.3:+74320389 None:intergenic
ATAAGCAGTGTCTTCAACGA+TGG 0.584997 8.3:+74320367 None:intergenic
GCGAGGACGATCACGGAGGA+AGG 0.586418 8.3:+74321992 None:intergenic
CCCACGGTATGTCTTCTCGC+TGG 0.589239 8.3:-74322109 MS.gene011054:CDS
AAGGGTGAAGTCAGGTTCGT+CGG 0.597747 8.3:+74321827 None:intergenic
ACGCCTCCCCACTCAAACAG+TGG 0.597784 8.3:-74322138 MS.gene011054:CDS
AGAGCAATACTAAGCTGCAA+AGG 0.600547 8.3:+74319324 None:intergenic
TTTGAGTGGGGAGGCGTGAG+AGG 0.604427 8.3:+74322144 None:intergenic
TCCTGGAGAGGGCGTCGAGG+AGG 0.608190 8.3:+74320020 None:intergenic
ATGGTGATTGGGTAATGGGA+AGG 0.609971 8.3:+74320140 None:intergenic
GGTGCATTAATTTCAAGGGA+AGG 0.612357 8.3:+74320175 None:intergenic
AAGATTATCAAATATGCCAA+GGG 0.612890 8.3:-74318677 MS.gene011054:CDS
GGTGAAAACCACTGTTTGAG+TGG 0.617650 8.3:+74322130 None:intergenic
CTGGAGAACAGCTCCAATGA+CGG 0.621242 8.3:+74321881 None:intergenic
CTAGATGTTTAGTCCTGGAG+AGG 0.621490 8.3:+74320008 None:intergenic
TATACTTGTGTGAAACATCA+CGG 0.625520 8.3:+74320116 None:intergenic
CCCACCACCAAAATTGCTGT+CGG 0.626005 8.3:+74320198 None:intergenic
AACCATAAACTGAATTGACA+CGG 0.626049 8.3:+74321913 None:intergenic
GTCGAGGAGGTTGAGTAATG+CGG 0.628415 8.3:+74320033 None:intergenic
GCATTCACAGAAGCCACTTG+AGG 0.629944 8.3:+74320331 None:intergenic
ATGGGAAGGTATTCAAGATG+AGG 0.632184 8.3:+74320154 None:intergenic
GTGGATCCCATCCTAAAATG+GGG 0.635041 8.3:+74318872 None:intergenic
CGGCATCGTCGCAATAGAGA+CGG 0.639381 8.3:+74321847 None:intergenic
AGAGCATTGGTGTTAACCGA+GGG 0.640809 8.3:+74319072 None:intergenic
AGATCTCAACCACATTCCAC+CGG 0.642122 8.3:-74322231 MS.gene011054:CDS
GTGAAAACCACTGTTTGAGT+GGG 0.643702 8.3:+74322131 None:intergenic
TTTGAGTGCTACAACAACCA+AGG 0.643950 8.3:-74319984 MS.gene011054:intron
AAATTCGATAGAGGCCAAGT+GGG 0.648999 8.3:+74318822 None:intergenic
TAGAGCATTGGTGTTAACCG+AGG 0.649652 8.3:+74319071 None:intergenic
TAGATGTTTAGTCCTGGAGA+GGG 0.652970 8.3:+74320009 None:intergenic
TAAATTCGATAGAGGCCAAG+TGG 0.654305 8.3:+74318821 None:intergenic
GCCAGCGAGAAGACATACCG+TGG 0.659818 8.3:+74322108 None:intergenic
AAACCACTGTTTGAGTGGGG+AGG 0.663731 8.3:+74322135 None:intergenic
TGGATCCCATCCTAAAATGG+GGG 0.667551 8.3:+74318873 None:intergenic
CCAGCGAGAAGACATACCGT+GGG 0.672646 8.3:+74322109 None:intergenic
TAGAAGTTGGCACATTCCAG+AGG 0.676073 8.3:+74318654 None:intergenic
TTGTGTGAAACATCACGGAA+TGG 0.677306 8.3:+74320121 None:intergenic
ACGGTATGTCTTCTCGCTGG+CGG 0.680201 8.3:-74322106 MS.gene011054:CDS
TAGTCCTGGAGAGGGCGTCG+AGG 0.686944 8.3:+74320017 None:intergenic
TGAAAACCACTGTTTGAGTG+GGG 0.707035 8.3:+74322132 None:intergenic
CATCGTCGCAATAGAGACGG+AGG 0.707735 8.3:+74321850 None:intergenic
ACGGAGGAAGGTAAGAACAG+CGG 0.745697 8.3:+74322004 None:intergenic
TGTCGCGAGGACGATCACGG+AGG 0.765476 8.3:+74321988 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+TGG - chr8.3:74319446-74319465 MS.gene011054:intron 0.0%
!! TTAATATTAATATTAATTAA+TGG + chr8.3:74319411-74319430 None:intergenic 0.0%
!! TCATTATATTAGTATTTATT+TGG - chr8.3:74319824-74319843 MS.gene011054:intron 10.0%
!!! AAATTCAAGTATTTTTTATT+GGG + chr8.3:74319603-74319622 None:intergenic 10.0%
!!! TAAATTCAAGTATTTTTTAT+TGG + chr8.3:74319604-74319623 None:intergenic 10.0%
!! AATTAATCAGGTTATATATT+AGG + chr8.3:74321935-74321954 None:intergenic 15.0%
!! TAAATTACTAGATCAAAATT+TGG + chr8.3:74319475-74319494 None:intergenic 15.0%
!!! CATCATTAAAAATCATTTTA+AGG - chr8.3:74319940-74319959 MS.gene011054:intron 15.0%
!!! CTTAAAATGATTTTTAATGA+TGG + chr8.3:74319942-74319961 None:intergenic 15.0%
!!! TTATAGTTTTTATACTCAAA+AGG - chr8.3:74319704-74319723 MS.gene011054:intron 15.0%
!! AAAAACTTTGTAAAGGATAT+TGG - chr8.3:74320233-74320252 MS.gene011054:CDS 20.0%
!! AAATATATAGCAAAGATACA+GGG - chr8.3:74320040-74320059 MS.gene011054:CDS 20.0%
!! AATAAGAGAGATCAAATATA+GGG + chr8.3:74321157-74321176 None:intergenic 20.0%
!! AATTAACAAAAATTAGAGAG+TGG - chr8.3:74319741-74319760 MS.gene011054:intron 20.0%
!! TTAAAATCATGTTACATTCT+CGG + chr8.3:74319550-74319569 None:intergenic 20.0%
!! TTGTTAATTGAAGCTTAATT+TGG - chr8.3:74321892-74321911 MS.gene011054:CDS 20.0%
!!! AATTTTCAAACTTAAACTCA+TGG - chr8.3:74321437-74321456 MS.gene011054:intron 20.0%
!!! AGATTCAGATTTTCAATTTT+TGG + chr8.3:74320592-74320611 None:intergenic 20.0%
!!! AGCAATAAAACAAGAATTTT+TGG - chr8.3:74320145-74320164 MS.gene011054:CDS 20.0%
!!! ATAAAAGTTCAGTTTTTTCA+AGG + chr8.3:74320662-74320681 None:intergenic 20.0%
!!! ATTTTCAAACTTAAACTCAT+GGG - chr8.3:74321438-74321457 MS.gene011054:intron 20.0%
!!! GATTCAGATTTTCAATTTTT+GGG + chr8.3:74320591-74320610 None:intergenic 20.0%
! AAAGATTATCAAATATGCCA+AGG - chr8.3:74322203-74322222 MS.gene011054:CDS 25.0%
! AAATATTTCACTATCCGATA+CGG + chr8.3:74321253-74321272 None:intergenic 25.0%
! AAATCCTTTAAATTCGATAG+AGG + chr8.3:74322071-74322090 None:intergenic 25.0%
! AAGATTATCAAATATGCCAA+GGG - chr8.3:74322204-74322223 MS.gene011054:CDS 25.0%
! ACTAAAATAAAACCTAACCT+TGG + chr8.3:74320917-74320936 None:intergenic 25.0%
! ATAAGAGAGATCAAATATAG+GGG + chr8.3:74321156-74321175 None:intergenic 25.0%
! ATCGAATTTAAAGGATTTCA+AGG - chr8.3:74322073-74322092 MS.gene011054:CDS 25.0%
! CAAATATATAGCAAAGATAC+AGG - chr8.3:74320039-74320058 MS.gene011054:CDS 25.0%
! GAATAAGAGAGATCAAATAT+AGG + chr8.3:74321158-74321177 None:intergenic 25.0%
! TAATCAGGTTATATATTAGG+TGG + chr8.3:74321932-74321951 None:intergenic 25.0%
! TACTTGTGTACACAATAAAT+AGG - chr8.3:74321202-74321221 MS.gene011054:intron 25.0%
! TTCATTGTAATAGTAAGTGT+CGG - chr8.3:74319342-74319361 MS.gene011054:CDS 25.0%
! TTTGTTGCAAAAGAAACTTA+AGG + chr8.3:74321612-74321631 None:intergenic 25.0%
!! AAGTTTCTTTTGCAACAAAT+TGG - chr8.3:74321613-74321632 MS.gene011054:intron 25.0%
!! TTTTCAAACTTAAACTCATG+GGG - chr8.3:74321439-74321458 MS.gene011054:intron 25.0%
!!! ACTTTCATTTGCTGTTATTT+TGG - chr8.3:74321385-74321404 MS.gene011054:intron 25.0%
!!! ATTCTTGTTTTATTGCTCTT+TGG + chr8.3:74320142-74320161 None:intergenic 25.0%
!!! TTTTTTGTGGTAGTAGTTTA+TGG - chr8.3:74319771-74319790 MS.gene011054:intron 25.0%
AACCATAAACTGAATTGACA+CGG + chr8.3:74318971-74318990 None:intergenic 30.0%
AACGAAAACACTGAATCTAT+TGG + chr8.3:74318856-74318875 None:intergenic 30.0%
AATATTTCACTATCCGATAC+GGG + chr8.3:74321252-74321271 None:intergenic 30.0%
ATGAGGTGCATTAATTTCAA+GGG + chr8.3:74320713-74320732 None:intergenic 30.0%
ATGCCTTTGATCTTAAGTAT+TGG - chr8.3:74320389-74320408 MS.gene011054:CDS 30.0%
CAATGAAGACTTGAATAAGA+TGG + chr8.3:74321974-74321993 None:intergenic 30.0%
CCTCAAAATTCAATGTGAAA+AGG - chr8.3:74321868-74321887 MS.gene011054:CDS 30.0%
GAAGTGAAATTCGATAAACA+AGG - chr8.3:74319197-74319216 MS.gene011054:intron 30.0%
GGGAAGAAAAAACTTTGTAA+AGG - chr8.3:74320100-74320119 MS.gene011054:CDS 30.0%
GGTACTAAAGTTAGATAGAT+AGG + chr8.3:74321471-74321490 None:intergenic 30.0%
GTGTTCAAACCAAAAAACAT+GGG + chr8.3:74320829-74320848 None:intergenic 30.0%
TACTTGAATATATCCCGTAT+CGG - chr8.3:74321236-74321255 MS.gene011054:intron 30.0%
TATACTTGTGTGAAACATCA+CGG + chr8.3:74320768-74320787 None:intergenic 30.0%
TGCTTTGTATAAAACTGAAC+TGG - chr8.3:74320980-74320999 MS.gene011054:intron 30.0%
TGTCAACAAGTTATGAAATC+TGG + chr8.3:74321295-74321314 None:intergenic 30.0%
TTAAATTACTCTGTTCAGCA+AGG + chr8.3:74321492-74321511 None:intergenic 30.0%
! AACATTTTGAATGTTGGAGT+GGG - chr8.3:74320197-74320216 MS.gene011054:CDS 30.0%
! ATCTCAGAGACAAGAATTTT+TGG - chr8.3:74320014-74320033 MS.gene011054:CDS 30.0%
! ATGTGCTTTATTAAGTGCTT+TGG - chr8.3:74321314-74321333 MS.gene011054:intron 30.0%
! CATAAGGTCTAAAACATTGT+TGG - chr8.3:74321096-74321115 MS.gene011054:intron 30.0%
! CCTTTTCACATTGAATTTTG+AGG + chr8.3:74321871-74321890 None:intergenic 30.0%
! GTTGAGAATGTTTTGCAAAA+AGG - chr8.3:74322118-74322137 MS.gene011054:CDS 30.0%
! TTTTTGTACTAATTGCTGCT+TGG - chr8.3:74321698-74321717 MS.gene011054:intron 30.0%
!! ATATTGGTTTGTTTGGCATA+CGG - chr8.3:74320249-74320268 MS.gene011054:CDS 30.0%
!! ATTAGCCTTAAGACATTGAT+GGG - chr8.3:74319886-74319905 MS.gene011054:intron 30.0%
!! CTGGTTCTACTTGATTAAAA+GGG + chr8.3:74321276-74321295 None:intergenic 30.0%
!! GTAAACAAATTGCTTTAGAG+AGG + chr8.3:74320495-74320514 None:intergenic 30.0%
!! GTAAAGGATATTGGTTTGTT+TGG - chr8.3:74320242-74320261 MS.gene011054:CDS 30.0%
!! TATTAGCCTTAAGACATTGA+TGG - chr8.3:74319885-74319904 MS.gene011054:intron 30.0%
!! TCTGGTTCTACTTGATTAAA+AGG + chr8.3:74321277-74321296 None:intergenic 30.0%
!!! TCAGTTTTTTCAAGGTTGAT+GGG + chr8.3:74320654-74320673 None:intergenic 30.0%
!!! TTCAGTTTTTTCAAGGTTGA+TGG + chr8.3:74320655-74320674 None:intergenic 30.0%
AACTTGCAGAGTTTGAATAC+AGG - chr8.3:74321064-74321083 MS.gene011054:intron 35.0%
AAGAAAACGGAGTAGAAGAT+CGG - chr8.3:74318676-74318695 MS.gene011054:CDS 35.0%
ACAGCATGACACTTACATAT+TGG + chr8.3:74320340-74320359 None:intergenic 35.0%
ACTTGCAGAGTTTGAATACA+GGG - chr8.3:74321065-74321084 MS.gene011054:intron 35.0%
AGTATTTAACACGCAGTCAT+GGG - chr8.3:74319972-74319991 MS.gene011054:intron 35.0%
AGTTTCCCATCAATGTCTTA+AGG + chr8.3:74319894-74319913 None:intergenic 35.0%
ATGATGGCATTTAGTGCAAT+TGG + chr8.3:74319926-74319945 None:intergenic 35.0%
ATGTTGAATGTTGGAGAGAT+TGG - chr8.3:74320079-74320098 MS.gene011054:CDS 35.0%
CAAAACTAGATGTTTAGTCC+TGG + chr8.3:74320881-74320900 None:intergenic 35.0%
CACATTATTCTGAGTCAGAA+AGG - chr8.3:74319272-74319291 MS.gene011054:intron 35.0%
CATACACTCTACTGAATCAA+AGG + chr8.3:74319863-74319882 None:intergenic 35.0%
GAATGTCATACTTCTTACTC+TGG + chr8.3:74322180-74322199 None:intergenic 35.0%
GATGAGGTGCATTAATTTCA+AGG + chr8.3:74320714-74320733 None:intergenic 35.0%
GCACCAATACTTAAGATCAA+AGG + chr8.3:74320395-74320414 None:intergenic 35.0%
GGTGTTCAAACCAAAAAACA+TGG + chr8.3:74320830-74320849 None:intergenic 35.0%
GTGTCAATTCAGTTTATGGT+TGG - chr8.3:74318970-74318989 MS.gene011054:intron 35.0%
TACTCTGTTATCAACGACTA+TGG - chr8.3:74318942-74318961 MS.gene011054:intron 35.0%
TCAAAATTGTCCTAAGCTTC+AGG - chr8.3:74321844-74321863 MS.gene011054:CDS 35.0%
TCAACAAATTCCATCTCATC+TGG + chr8.3:74322103-74322122 None:intergenic 35.0%
TGAATAAGATGGAACATTCG+TGG + chr8.3:74321963-74321982 None:intergenic 35.0%
TGTATAAAACTGAACTGGCT+TGG - chr8.3:74320985-74321004 MS.gene011054:intron 35.0%
TGTTGAATGTTGGAGAGATT+GGG - chr8.3:74320080-74320099 MS.gene011054:CDS 35.0%
TTCCGTGTCAATTCAGTTTA+TGG - chr8.3:74318966-74318985 MS.gene011054:intron 35.0%
TTCGTGGCAATGAATTAATC+AGG + chr8.3:74321947-74321966 None:intergenic 35.0%
TTGGCCTCTATCGAATTTAA+AGG - chr8.3:74322064-74322083 MS.gene011054:CDS 35.0%
! AAGGTCTAAAACATTGTTGG+TGG - chr8.3:74321099-74321118 MS.gene011054:intron 35.0%
! ACATTTTGAATGTTGGAGTG+GGG - chr8.3:74320198-74320217 MS.gene011054:CDS 35.0%
! CAACATTTTGAATGTTGGAG+TGG - chr8.3:74320196-74320215 MS.gene011054:CDS 35.0%
! CTGCACAACATTTTGAATGT+TGG - chr8.3:74320191-74320210 MS.gene011054:CDS 35.0%
! TTTTATGCCGACAGCAATTT+TGG - chr8.3:74320676-74320695 MS.gene011054:intron 35.0%
! TTTTTACAAGCTTCCCACAA+TGG + chr8.3:74321017-74321036 None:intergenic 35.0%
!! GGTTTTATGACTTACTTTCG+TGG - chr8.3:74321335-74321354 MS.gene011054:intron 35.0%
!!! GAGTGGAAAGAACTTTTTTG+TGG - chr8.3:74319758-74319777 MS.gene011054:intron 35.0%
!!! GATCTCTATCCCATGTTTTT+TGG - chr8.3:74320817-74320836 MS.gene011054:intron 35.0%
AAACATCACGGAATGGTGAT+TGG + chr8.3:74320756-74320775 None:intergenic 40.0%
AAATATAGGGGCAGGAAATG+TGG + chr8.3:74321144-74321163 None:intergenic 40.0%
AAATTCGATAGAGGCCAAGT+GGG + chr8.3:74322062-74322081 None:intergenic 40.0%
AACATCACGGAATGGTGATT+GGG + chr8.3:74320755-74320774 None:intergenic 40.0%
AAGCAAGTACAGTAGAGCAT+TGG + chr8.3:74321825-74321844 None:intergenic 40.0%
AAGTGGGATACGAGACAATT+GGG + chr8.3:74322046-74322065 None:intergenic 40.0%
AGAGCAATACTAAGCTGCAA+AGG + chr8.3:74321560-74321579 None:intergenic 40.0%
ATAAGCAGTGTCTTCAACGA+TGG + chr8.3:74320517-74320536 None:intergenic 40.0%
ATTCCACCGGAAGAAGAAAA+CGG - chr8.3:74318663-74318682 MS.gene011054:CDS 40.0%
CAGTATTTAACACGCAGTCA+TGG - chr8.3:74319971-74319990 MS.gene011054:intron 40.0%
CTGCACAACATGTTGAATGT+TGG - chr8.3:74320070-74320089 MS.gene011054:CDS 40.0%
CTTCTACTGCAGCATCATAA+AGG + chr8.3:74320618-74320637 None:intergenic 40.0%
CTTGCAGAGTTTGAATACAG+GGG - chr8.3:74321066-74321085 MS.gene011054:intron 40.0%
GGTGCATTAATTTCAAGGGA+AGG + chr8.3:74320709-74320728 None:intergenic 40.0%
GTGAAAACCACTGTTTGAGT+GGG + chr8.3:74318753-74318772 None:intergenic 40.0%
TAAATTCGATAGAGGCCAAG+TGG + chr8.3:74322063-74322082 None:intergenic 40.0%
TAACATTCACTCTCCTCAAG+TGG - chr8.3:74320537-74320556 MS.gene011054:intron 40.0%
TAGATGTTTAGTCCTGGAGA+GGG + chr8.3:74320875-74320894 None:intergenic 40.0%
TCAAGGATTACCAGATGAGA+TGG - chr8.3:74322090-74322109 MS.gene011054:CDS 40.0%
TGAAAACCACTGTTTGAGTG+GGG + chr8.3:74318752-74318771 None:intergenic 40.0%
TGTGGATCCCATCCTAAAAT+GGG + chr8.3:74322013-74322032 None:intergenic 40.0%
TTCAAGTCTTCATTGCCTAC+AGG - chr8.3:74321979-74321998 MS.gene011054:CDS 40.0%
TTGGTATTGTGGACAAACAG+TGG - chr8.3:74321717-74321736 MS.gene011054:intron 40.0%
TTGTGTGAAACATCACGGAA+TGG + chr8.3:74320763-74320782 None:intergenic 40.0%
TTGTTGAGTAGAACATCGTC+CGG + chr8.3:74318714-74318733 None:intergenic 40.0%
TTGTTTGGCATACGGTCTTA+TGG - chr8.3:74320257-74320276 MS.gene011054:CDS 40.0%
TTTGAGTGCTACAACAACCA+AGG - chr8.3:74320897-74320916 MS.gene011054:intron 40.0%
! ATACGGTCTTATGGACGATT+TGG - chr8.3:74320266-74320285 MS.gene011054:CDS 40.0%
! CTAATTGCTGCTTGGTATTG+TGG - chr8.3:74321706-74321725 MS.gene011054:intron 40.0%
! GACACTGATTATCTCTGATC+TGG - chr8.3:74322153-74322172 MS.gene011054:CDS 40.0%
! GTATAACTTGCATGATGTGC+TGG - chr8.3:74320783-74320802 MS.gene011054:intron 40.0%
! TCTACTCCGTTTTCTTCTTC+CGG + chr8.3:74318672-74318691 None:intergenic 40.0%
!! AGATCGGATTAGTGCTATAC+CGG - chr8.3:74318692-74318711 MS.gene011054:CDS 40.0%
!! ATACAGGGGCATCAAACATA+AGG - chr8.3:74321080-74321099 MS.gene011054:intron 40.0%
!! ATGGGAAGGTATTCAAGATG+AGG + chr8.3:74320730-74320749 None:intergenic 40.0%
!! ATTTTGAGGACCTGAAGCTT+AGG + chr8.3:74321857-74321876 None:intergenic 40.0%
!! CAATTTTTGGGCAACCACAT+AGG + chr8.3:74320579-74320598 None:intergenic 40.0%
!! CGCATATTTTTAATGTCGCG+AGG + chr8.3:74318909-74318928 None:intergenic 40.0%
AACACTGAATCTATTGGCCG+AGG + chr8.3:74318850-74318869 None:intergenic 45.0%
AACCTAGTTTCTCTCAGGCA+TGG - chr8.3:74319101-74319120 MS.gene011054:intron 45.0%
AATGTTGGAGTGGGGAGATT+GGG - chr8.3:74320206-74320225 MS.gene011054:CDS 45.0%
ACGAGACAATTGGGATCACT+TGG + chr8.3:74322037-74322056 None:intergenic 45.0%
ACGGAATGGTGATTGGGTAA+TGG + chr8.3:74320749-74320768 None:intergenic 45.0%
AGATCTCAACCACATTCCAC+CGG - chr8.3:74318650-74318669 MS.gene011054:CDS 45.0%
ATGCCTGAGAGAAACTAGGT+TGG + chr8.3:74319102-74319121 None:intergenic 45.0%
CAAGTGGGATACGAGACAAT+TGG + chr8.3:74322047-74322066 None:intergenic 45.0%
CAATTGTCTCGTATCCCACT+TGG - chr8.3:74322045-74322064 MS.gene011054:CDS 45.0%
CGGAATGGTGATTGGGTAAT+GGG + chr8.3:74320748-74320767 None:intergenic 45.0%
CTAGATGTTTAGTCCTGGAG+AGG + chr8.3:74320876-74320895 None:intergenic 45.0%
CTGTGGATCCCATCCTAAAA+TGG + chr8.3:74322014-74322033 None:intergenic 45.0%
GAGAGATCAAATATAGGGGC+AGG + chr8.3:74321152-74321171 None:intergenic 45.0%
GGTGAAAACCACTGTTTGAG+TGG + chr8.3:74318754-74318773 None:intergenic 45.0%
GTGCTACAACAACCAAGGTT+AGG - chr8.3:74320902-74320921 MS.gene011054:intron 45.0%
GTGGATCCCATCCTAAAATG+GGG + chr8.3:74322012-74322031 None:intergenic 45.0%
TAGAAGTTGGCACATTCCAG+AGG + chr8.3:74322230-74322249 None:intergenic 45.0%
TCAAAATGTTGTGCAGCTGC+AGG + chr8.3:74320187-74320206 None:intergenic 45.0%
TCTGTGAATGCACTCCTATG+TGG - chr8.3:74320562-74320581 MS.gene011054:intron 45.0%
TGCCTGAGAGAAACTAGGTT+GGG + chr8.3:74319101-74319120 None:intergenic 45.0%
TGGATCCCATCCTAAAATGG+GGG + chr8.3:74322011-74322030 None:intergenic 45.0%
TTGGAGACAGACAAGTGCTT+TGG - chr8.3:74321404-74321423 MS.gene011054:intron 45.0%
TTTCTTCTTCCGGTGGAATG+TGG + chr8.3:74318662-74318681 None:intergenic 45.0%
! CAAACAGTGGTTTTCACCCA+CGG - chr8.3:74318756-74318775 MS.gene011054:CDS 45.0%
! TATGCCGACAGCAATTTTGG+TGG - chr8.3:74320679-74320698 MS.gene011054:intron 45.0%
! TTTAGAGCTCATGCTACCCT+CGG - chr8.3:74321793-74321812 MS.gene011054:intron 45.0%
!! AGAGCATTGGTGTTAACCGA+GGG + chr8.3:74321812-74321831 None:intergenic 45.0%
!! ATGGTGATTGGGTAATGGGA+AGG + chr8.3:74320744-74320763 None:intergenic 45.0%
!! TAGAGCATTGGTGTTAACCG+AGG + chr8.3:74321813-74321832 None:intergenic 45.0%
!! ATATAAATAAATCATATTAT+GGG + chr8.3:74321665-74321684 None:intergenic 5.0%
!! TAATATGATTTATTTATATA+TGG - chr8.3:74321666-74321685 MS.gene011054:intron 5.0%
!! TATATAAATAAATCATATTA+TGG + chr8.3:74321666-74321685 None:intergenic 5.0%
!!! TAATTTTTTCAAAATTTAAT+TGG + chr8.3:74319317-74319336 None:intergenic 5.0%
!!! TTTATTTTTATTTTTTTTGA+AGG - chr8.3:74319491-74319510 MS.gene011054:intron 5.0%
AAACCACTGTTTGAGTGGGG+AGG + chr8.3:74318749-74318768 None:intergenic 50.0%
AAGGGTGAAGTCAGGTTCGT+CGG + chr8.3:74319057-74319076 None:intergenic 50.0%
ACGGAGGAAGGTAAGAACAG+CGG + chr8.3:74318880-74318899 None:intergenic 50.0%
AGCCATGCCTGAGAGAAACT+AGG + chr8.3:74319106-74319125 None:intergenic 50.0%
ATGTGAAGAGGCTTGACGGA+AGG + chr8.3:74319076-74319095 None:intergenic 50.0%
CAATTGGGATCACTTGGCTG+TGG + chr8.3:74322031-74322050 None:intergenic 50.0%
CCCACCACCAAAATTGCTGT+CGG + chr8.3:74320686-74320705 None:intergenic 50.0%
CTGGAGAACAGCTCCAATGA+CGG + chr8.3:74319003-74319022 None:intergenic 50.0%
GAATGTTGGAGTGGGGAGAT+TGG - chr8.3:74320205-74320224 MS.gene011054:CDS 50.0%
GCATTCACAGAAGCCACTTG+AGG + chr8.3:74320553-74320572 None:intergenic 50.0%
GGACATGTGAAGAGGCTTGA+CGG + chr8.3:74319080-74319099 None:intergenic 50.0%
GGCAGGAAATGTGGCAGATT+AGG + chr8.3:74321135-74321154 None:intergenic 50.0%
GGCTTGGCTATGTCCATTGT+GGG - chr8.3:74321001-74321020 MS.gene011054:intron 50.0%
GGTTGGATTATCGCCGTCAT+TGG - chr8.3:74318987-74319006 MS.gene011054:intron 50.0%
GTCCCAACCTAGTTTCTCTC+AGG - chr8.3:74319096-74319115 MS.gene011054:intron 50.0%
GTCGAGGAGGTTGAGTAATG+CGG + chr8.3:74320851-74320870 None:intergenic 50.0%
GTGGACAAACAGTGGCTGTT+TGG - chr8.3:74321725-74321744 MS.gene011054:intron 50.0%
TAATGTCGCGAGGACGATCA+CGG + chr8.3:74318899-74318918 None:intergenic 50.0%
TCAAATATGCCAAGGGCCTC+TGG - chr8.3:74322211-74322230 MS.gene011054:CDS 50.0%
TGTGAAGAGGCTTGACGGAA+GGG + chr8.3:74319075-74319094 None:intergenic 50.0%
! AATTGGTGTGTCGACGTGTC+AGG + chr8.3:74319300-74319319 None:intergenic 50.0%
! ACTCCGTTTTCTTCTTCCGG+TGG + chr8.3:74318669-74318688 None:intergenic 50.0%
! ATTGGTGTGTCGACGTGTCA+GGG + chr8.3:74319299-74319318 None:intergenic 50.0%
! CTAGGTTGGGACATGTGAAG+AGG + chr8.3:74319088-74319107 None:intergenic 50.0%
! TGGCTTGGCTATGTCCATTG+TGG - chr8.3:74321000-74321019 MS.gene011054:intron 50.0%
!! CCGACAGCAATTTTGGTGGT+GGG - chr8.3:74320683-74320702 MS.gene011054:intron 50.0%
!! GCATCTTTGGAAGCGTCTTC+AGG - chr8.3:74318797-74318816 MS.gene011054:CDS 50.0%
!! TGCAGTCCCCCATTTTAGGA+TGG - chr8.3:74322002-74322021 MS.gene011054:CDS 50.0%
!!! GCAGTCCCCCATTTTAGGAT+GGG - chr8.3:74322003-74322022 MS.gene011054:CDS 50.0%
AAATGGGGGACTGCACCTGT+AGG + chr8.3:74321997-74322016 None:intergenic 55.0%
ACGGTATGTCTTCTCGCTGG+CGG - chr8.3:74318775-74318794 MS.gene011054:CDS 55.0%
CATCGTCGCAATAGAGACGG+AGG + chr8.3:74319034-74319053 None:intergenic 55.0%
CCAGCGAGAAGACATACCGT+GGG + chr8.3:74318775-74318794 None:intergenic 55.0%
CGGCATCGTCGCAATAGAGA+CGG + chr8.3:74319037-74319056 None:intergenic 55.0%
CGTCATTGGAGCTGTTCTCC+AGG - chr8.3:74319001-74319020 MS.gene011054:intron 55.0%
CTTGACGGAAGGGTGAAGTC+AGG + chr8.3:74319065-74319084 None:intergenic 55.0%
! CAGGTGCAGTCCCCCATTTT+AGG - chr8.3:74321998-74322017 MS.gene011054:CDS 55.0%
! GTGTCGTGTCGTCTTGGTGT+TGG - chr8.3:74319364-74319383 MS.gene011054:intron 55.0%
!! GCCGACAGCAATTTTGGTGG+TGG - chr8.3:74320682-74320701 MS.gene011054:intron 55.0%
ACGCCTCCCCACTCAAACAG+TGG - chr8.3:74318743-74318762 MS.gene011054:CDS 60.0%
AGAGACGGAGGTCGAGTTCC+TGG + chr8.3:74319022-74319041 None:intergenic 60.0%
CCCACGGTATGTCTTCTCGC+TGG - chr8.3:74318772-74318791 MS.gene011054:CDS 60.0%
CTGCGACGAGTCTTTCGCCT+CGG - chr8.3:74318830-74318849 MS.gene011054:CDS 60.0%
CTTCTCGCTGGCGGCATCTT+TGG - chr8.3:74318784-74318803 MS.gene011054:CDS 60.0%
GCCAGCGAGAAGACATACCG+TGG + chr8.3:74318776-74318795 None:intergenic 60.0%
TGGCACATTCCAGAGGCCCT+TGG + chr8.3:74322223-74322242 None:intergenic 60.0%
! TTTGAGTGGGGAGGCGTGAG+AGG + chr8.3:74318740-74318759 None:intergenic 60.0%
!! GTGTCGGTGTCGTGTCGTCT+TGG - chr8.3:74319358-74319377 MS.gene011054:intron 60.0%
GCGAGGACGATCACGGAGGA+AGG + chr8.3:74318892-74318911 None:intergenic 65.0%
TGTCGCGAGGACGATCACGG+AGG + chr8.3:74318896-74318915 None:intergenic 65.0%
!! TAGTCCTGGAGAGGGCGTCG+AGG + chr8.3:74320867-74320886 None:intergenic 65.0%
ACCTCCTCGACGCCCTCTCC+AGG - chr8.3:74320860-74320879 MS.gene011054:intron 70.0%
!! TCCTGGAGAGGGCGTCGAGG+AGG + chr8.3:74320864-74320883 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 74318645 74322258 74318645 ID=MS.gene011054
chr8.3 mRNA 74318645 74322258 74318645 ID=MS.gene011054.t1;Parent=MS.gene011054
chr8.3 exon 74321825 74322258 74321825 ID=MS.gene011054.t1.exon1;Parent=MS.gene011054.t1
chr8.3 CDS 74321825 74322258 74321825 ID=cds.MS.gene011054.t1;Parent=MS.gene011054.t1
chr8.3 exon 74319985 74320435 74319985 ID=MS.gene011054.t1.exon2;Parent=MS.gene011054.t1
chr8.3 CDS 74319985 74320435 74319985 ID=cds.MS.gene011054.t1;Parent=MS.gene011054.t1
chr8.3 exon 74319301 74319361 74319301 ID=MS.gene011054.t1.exon3;Parent=MS.gene011054.t1
chr8.3 CDS 74319301 74319361 74319301 ID=cds.MS.gene011054.t1;Parent=MS.gene011054.t1
chr8.3 exon 74319014 74319105 74319014 ID=MS.gene011054.t1.exon4;Parent=MS.gene011054.t1
chr8.3 CDS 74319014 74319105 74319014 ID=cds.MS.gene011054.t1;Parent=MS.gene011054.t1
chr8.3 exon 74318645 74318902 74318645 ID=MS.gene011054.t1.exon5;Parent=MS.gene011054.t1
chr8.3 CDS 74318645 74318902 74318645 ID=cds.MS.gene011054.t1;Parent=MS.gene011054.t1
Gene Sequence

>MS.gene011054

ATGGAAGATCTCAACCACATTCCACCGGAAGAAGAAAACGGAGTAGAAGATCGGATTAGTGCTATACCGGACGATGTTCTACTCAACAACATCCTCTCACGCCTCCCCACTCAAACAGTGGTTTTCACCCACGGTATGTCTTCTCGCTGGCGGCATCTTTGGAAGCGTCTTCAGGTTCTTGATTTCTGCGACGAGTCTTTCGCCTCGGCCAATAGATTCAGTGTTTTCGTTTCCGCTGTTCTTACCTTCCTCCGTGATCGTCCTCGCGACATTAAAAATATGCGTTTACACTGTGCTTACTCTGTTATCAACGACTATGGTTTCCGTGTCAATTCAGTTTATGGTTGGATTATCGCCGTCATTGGAGCTGTTCTCCAGGAACTCGACCTCCGTCTCTATTGCGACGATGCCGACGAACCTGACTTCACCCTTCCGTCAAGCCTCTTCACATGTCCCAACCTAGTTTCTCTCAGGCATGGCTTTCTATTTATTAATTGAGTTAATCTAAAATTAGAATATTATAATTAATTATGATTAGTAGAGTTATTAAGTGAAGTGAAATTCGATAAACAAGGATATACGAGCAGATACAAATAATAACAATAACATATATTTTTACTCTAAAGTCACATTATTCTGAGTCAGAAAGGACCCTGACACGTCGACACACCAATTAAATTTTGAAAAAATTACATAATTCATTGTAATAGTAAGTGTCGGTGTCGTGTCGTCTTGGTGTTGGACATCGAGATACACAGTCTCACCATTAATTAATATTAATATTAAAATTAAAAAATTTAATATATATATATATATATATATGGTTACCAAATTTTGATCTAGTAATTTATTTTTATTTTTTTTGAAGGAAGTAATTTTTCTTAATATTTAATAAATATTTGCCGAGAATGTAACATGATTTTAAACTACTAAATTTACATTTTTGTTAATTTTACCCAATAAAAAATACTTGAATTTACAATTTGTCAAAAATAATAAAAGTATTTATCACTATGAATTTAAAATAGTATCATTTACATTTCATACAATTAATCATAATTATAGTTTTTATACTCAAAAGGAAAAAAACAAAAAAAATTAACAAAAATTAGAGAGTGGAAAGAACTTTTTTGTGGTAGTAGTTTATGGTACATTATGAGTCAAAATACTTTGATTTAGTCATTATATTAGTATTTATTTGGAACTACGCTAAAGCCTTTGATTCAGTAGAGTGTATGAGTATTAGCCTTAAGACATTGATGGGAAACTAAAAGTCTACCAATTGCACTAAATGCCATCATTAAAAATCATTTTAAGGAAAATTAACAGTATTTAACACGCAGTCATGGGAAAATTAATAGCAACTAAAATCTCAGAGACAAGAATTTTTGGTGCAAATATATAGCAAAGATACAGGGTGTGCAGCTGCACAACATGTTGAATGTTGGAGAGATTGGGAAGAAAAAACTTTGTAAAACTAAAATCTCAGAGTGTCCAAAGAGCAATAAAACAAGAATTTTTGGTGCAAATAGCAAAGATCCTGCAGCTGCACAACATTTTGAATGTTGGAGTGGGGAGATTGGGAAGAAAAAACTTTGTAAAGGATATTGGTTTGTTTGGCATACGGTCTTATGGACGATTTGGAAAGCGAGAAATGATAAGATATTCAATAATCTACTTAATTGAACTTAACCAATATGTAAGTGTCATGCTGTTGTCTGTTTGAAATCAATGTACATATGATATGCCTTTGATCTTAAGTATTGGTGCTACGTAGTTATGAAATGTGATGTAACTTATATCGTTGTTTGTTTGTTTATCAGTATTCGTGACAGAATTCATTTGCACCTCTCTAAAGCAATTTGTTTACCATCGTTGAAGACACTGCTTATTAACATTCACTCTCCTCAAGTGGCTTCTGTGAATGCACTCCTATGTGGTTGCCCAAAAATTGAAAATCTGAATCTTAGCCTTTATGATGCTGCAGTAGAAGACATAATTTTCATCCCATCAACCTTGAAAAAACTGAACTTTTATGCCGACAGCAATTTTGGTGGTGGGCCTTCCCTTGAAATTAATGCACCTCATCTTGAATACCTTCCCATTACCCAATCACCATTCCGTGATGTTTCACACAAGTATAACTTGCATGATGTGCTGGAAGCAACTCTTGATCTCTATCCCATGTTTTTTGGTTTGAACACCGCATTACTCAACCTCCTCGACGCCCTCTCCAGGACTAAACATCTAGTTTTGAGTGCTACAACAACCAAGGTTAGGTTTTATTTTAGTTATTTAATGTTAACTTCATCATTTGTAGAAAACTTAACATTCTTGCTTTGTATAAAACTGAACTGGCTTGGCTATGTCCATTGTGGGAAGCTTGTAAAAAAGCAGCAGTATTTTGTAATTTTGTGTTAACTTGCAGAGTTTGAATACAGGGGCATCAAACATAAGGTCTAAAACATTGTTGGTGGAAATGATGCACCTAATCTGCCACATTTCCTGCCCCTATATTTGATCTCTCTTATTCTTGTTTATTTCAGTTATAACTTTTTACTTGTGTACACAATAAATAGGTTAAAGCTTTTTACTTGAATATATCCCGTATCGGATAGTGAAATATTTCCCTTTTAATCAAGTAGAACCAGATTTCATAACTTGTTGACATGTGCTTTATTAAGTGCTTTGGTTTTATGACTTACTTTCGTGGCTAAAGCACGATCTTTACTATAATCTCACTTTCATTTGCTGTTATTTTGGAGACAGACAAGTGCTTTGGTTTCAACTAGAATTTTCAAACTTAAACTCATGGGGATTATGCCTATCTATCTAACTTTAGTACCTTGCTGAACAGAGTAATTTAATTAGATGCAATGCTTTGCAGCTTAGTATAGAGAAATTGTGAGAATCCTTTGCAGCTTAGTATTGCTCTACTATGTTCAATGTTTTTAACAAGTTAGTCCTTAAGTTTCTTTTGCAACAAATTGGTCTTTAAGAGATGTCAAATTATATCTCCCATAATATGATTTATTTATATATGGATAGAAATATTTTTGTACTAATTGCTGCTTGGTATTGTGGACAAACAGTGGCTGTTTGGTAAATCTGATGATCAACTTTTTCAAAAATTTAGCTGTTTGCTTCGTTTAGAGCTCATGCTACCCTCGGTTAACACCAATGCTCTACTGTACTTGCTTCAAAATTGTCCTAAGCTTCAGGTCCTCAAAATTCAATGTGAAAAGGTTTGTTAATTGAAGCTTAATTTGGTCTCTATAACTACACCACCTAATATATAACCTGATTAATTCATTGCCACGAATGTTCCATCTTATTCAAGTCTTCATTGCCTACAGGTGCAGTCCCCCATTTTAGGATGGGATCCACAGCCAAGTGATCCCAATTGTCTCGTATCCCACTTGGCCTCTATCGAATTTAAAGGATTTCAAGGATTACCAGATGAGATGGAATTTGTTGAGAATGTTTTGCAAAAAGGACTTGTTTTGAAGACACTGATTATCTCTGATCTGGACCAGAGTAAGAAGTATGACATTCTCAAAAGATTATCAAATATGCCAAGGGCCTCTGGAATGTGCCAACTTCTATTTGACTGA

Protein sequence

>MS.gene011054.t1

MEDLNHIPPEEENGVEDRISAIPDDVLLNNILSRLPTQTVVFTHGMSSRWRHLWKRLQVLDFCDESFASANRFSVFVSAVLTFLRDRPRDIKNMRLHCAYSVINDYGFRVNSVYGWIIAVIGAVLQELDLRLYCDDADEPDFTLPIRDRIHLHLSKAICLPSLKTLLINIHSPQVASVNALLCGCPKIENLNLSLYDAAVEDIIFIPSTLKKLNFYADSNFGGGPSLEINAPHLEYLPITQSPFRDVSHKYNLHDVLEATLDLYPMFFGLNTALLNLLDALSRTKHLVLSATTTKRNCENPLQLSIALLCSMFLTKLMLPSVNTNALLYLLQNCPKLQVLKIQCEKVQSPILGWDPQPSDPNCLVSHLASIEFKGFQGLPDEMEFVENVLQKGLVLKTLIISDLDQSKKYDILKRLSNMPRASGMCQLLFD