Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074257.t1 | AES70414.1 | 52 | 346 | 97 | 4 | 1 | 343 | 1 | 280 | 1.30E-87 | 334 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074257.t1 | G7J017 | 52.0 | 346 | 97 | 4 | 1 | 343 | 1 | 280 | 9.4e-88 | 334.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049159 | MS.gene074257 | 0.811217 | 7.82E-51 | -1.69E-46 |
MS.gene049501 | MS.gene074257 | 0.830371 | 3.05E-55 | -1.69E-46 |
MS.gene049756 | MS.gene074257 | 0.812781 | 3.57E-51 | -1.69E-46 |
MS.gene050226 | MS.gene074257 | 0.80242 | 5.66E-49 | -1.69E-46 |
MS.gene050227 | MS.gene074257 | 0.823559 | 1.30E-53 | -1.69E-46 |
MS.gene050228 | MS.gene074257 | 0.825592 | 4.31E-54 | -1.69E-46 |
MS.gene050303 | MS.gene074257 | 0.816365 | 5.74E-52 | -1.69E-46 |
MS.gene050438 | MS.gene074257 | 0.814721 | 1.33E-51 | -1.69E-46 |
MS.gene050442 | MS.gene074257 | 0.814493 | 1.50E-51 | -1.69E-46 |
MS.gene050719 | MS.gene074257 | 0.861553 | 9.47E-64 | -1.69E-46 |
MS.gene050721 | MS.gene074257 | 0.859621 | 3.64E-63 | -1.69E-46 |
MS.gene050724 | MS.gene074257 | 0.860026 | 2.75E-63 | -1.69E-46 |
MS.gene050780 | MS.gene074257 | 0.826582 | 2.51E-54 | -1.69E-46 |
MS.gene050807 | MS.gene074257 | 0.812248 | 4.67E-51 | -1.69E-46 |
MS.gene050815 | MS.gene074257 | 0.840025 | 1.11E-57 | -1.69E-46 |
MS.gene050824 | MS.gene074257 | 0.831364 | 1.74E-55 | -1.69E-46 |
MS.gene050844 | MS.gene074257 | 0.816895 | 4.37E-52 | -1.69E-46 |
MS.gene051243 | MS.gene074257 | 0.804174 | 2.45E-49 | -1.69E-46 |
MS.gene051247 | MS.gene074257 | 0.813183 | 2.91E-51 | -1.69E-46 |
MS.gene051265 | MS.gene074257 | 0.817504 | 3.19E-52 | -1.69E-46 |
MS.gene051328 | MS.gene074257 | 0.821709 | 3.50E-53 | -1.69E-46 |
MS.gene051700 | MS.gene074257 | 0.800676 | 1.29E-48 | -1.69E-46 |
MS.gene051719 | MS.gene074257 | 0.808708 | 2.71E-50 | -1.69E-46 |
MS.gene051744 | MS.gene074257 | 0.820379 | 7.08E-53 | -1.69E-46 |
MS.gene051790 | MS.gene074257 | 0.815058 | 1.12E-51 | -1.69E-46 |
MS.gene052012 | MS.gene074257 | 0.846122 | 2.65E-59 | -1.69E-46 |
MS.gene052020 | MS.gene074257 | 0.80081 | 1.21E-48 | -1.69E-46 |
MS.gene052286 | MS.gene074257 | 0.800908 | 1.16E-48 | -1.69E-46 |
MS.gene052323 | MS.gene074257 | 0.804893 | 1.74E-49 | -1.69E-46 |
MS.gene052376 | MS.gene074257 | 0.805184 | 1.51E-49 | -1.69E-46 |
MS.gene052561 | MS.gene074257 | 0.800667 | 1.29E-48 | -1.69E-46 |
MS.gene052665 | MS.gene074257 | 0.808154 | 3.56E-50 | -1.69E-46 |
MS.gene052896 | MS.gene074257 | 0.805838 | 1.10E-49 | -1.69E-46 |
MS.gene053008 | MS.gene074257 | 0.806939 | 6.45E-50 | -1.69E-46 |
MS.gene053054 | MS.gene074257 | -0.805116 | 1.56E-49 | -1.69E-46 |
MS.gene053226 | MS.gene074257 | 0.809227 | 2.10E-50 | -1.69E-46 |
MS.gene054236 | MS.gene074257 | 0.803697 | 3.08E-49 | -1.69E-46 |
MS.gene054472 | MS.gene074257 | 0.805703 | 1.17E-49 | -1.69E-46 |
MS.gene05468 | MS.gene074257 | 0.817346 | 3.46E-52 | -1.69E-46 |
MS.gene054775 | MS.gene074257 | 0.805907 | 1.06E-49 | -1.69E-46 |
MS.gene055466 | MS.gene074257 | 0.818484 | 1.91E-52 | -1.69E-46 |
MS.gene055468 | MS.gene074257 | 0.804344 | 2.26E-49 | -1.69E-46 |
MS.gene055778 | MS.gene074257 | 0.816426 | 5.56E-52 | -1.69E-46 |
MS.gene055808 | MS.gene074257 | 0.80639 | 8.42E-50 | -1.69E-46 |
MS.gene055818 | MS.gene074257 | 0.816645 | 4.97E-52 | -1.69E-46 |
MS.gene05604 | MS.gene074257 | 0.807418 | 5.10E-50 | -1.69E-46 |
MS.gene056091 | MS.gene074257 | 0.812117 | 4.98E-51 | -1.69E-46 |
MS.gene056215 | MS.gene074257 | 0.818599 | 1.80E-52 | -1.69E-46 |
MS.gene056366 | MS.gene074257 | 0.820232 | 7.65E-53 | -1.69E-46 |
MS.gene056506 | MS.gene074257 | 0.803281 | 3.76E-49 | -1.69E-46 |
MS.gene056631 | MS.gene074257 | 0.817936 | 2.55E-52 | -1.69E-46 |
MS.gene056760 | MS.gene074257 | 0.807944 | 3.95E-50 | -1.69E-46 |
MS.gene057026 | MS.gene074257 | 0.807179 | 5.73E-50 | -1.69E-46 |
MS.gene057060 | MS.gene074257 | 0.802827 | 4.66E-49 | -1.69E-46 |
MS.gene057140 | MS.gene074257 | 0.821316 | 4.31E-53 | -1.69E-46 |
MS.gene057444 | MS.gene074257 | 0.813623 | 2.33E-51 | -1.69E-46 |
MS.gene058084 | MS.gene074257 | 0.834591 | 2.74E-56 | -1.69E-46 |
MS.gene058146 | MS.gene074257 | 0.819542 | 1.10E-52 | -1.69E-46 |
MS.gene058168 | MS.gene074257 | 0.804711 | 1.89E-49 | -1.69E-46 |
MS.gene058636 | MS.gene074257 | 0.81887 | 1.56E-52 | -1.69E-46 |
MS.gene058906 | MS.gene074257 | 0.850602 | 1.53E-60 | -1.69E-46 |
MS.gene05954 | MS.gene074257 | 0.815902 | 7.29E-52 | -1.69E-46 |
MS.gene059789 | MS.gene074257 | 0.805238 | 1.47E-49 | -1.69E-46 |
MS.gene059830 | MS.gene074257 | 0.808883 | 2.49E-50 | -1.69E-46 |
MS.gene059842 | MS.gene074257 | 0.8132 | 2.89E-51 | -1.69E-46 |
MS.gene06001 | MS.gene074257 | 0.824348 | 8.48E-54 | -1.69E-46 |
MS.gene060310 | MS.gene074257 | 0.806612 | 7.56E-50 | -1.69E-46 |
MS.gene060322 | MS.gene074257 | 0.807501 | 4.90E-50 | -1.69E-46 |
MS.gene060429 | MS.gene074257 | 0.844629 | 6.71E-59 | -1.69E-46 |
MS.gene060572 | MS.gene074257 | 0.842443 | 2.58E-58 | -1.69E-46 |
MS.gene060586 | MS.gene074257 | 0.808615 | 2.84E-50 | -1.69E-46 |
MS.gene060637 | MS.gene074257 | 0.814308 | 1.65E-51 | -1.69E-46 |
MS.gene060803 | MS.gene074257 | 0.812853 | 3.44E-51 | -1.69E-46 |
MS.gene060907 | MS.gene074257 | 0.824511 | 7.76E-54 | -1.69E-46 |
MS.gene061040 | MS.gene074257 | -0.818932 | 1.51E-52 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074257.t1 | MTR_3g053920 | 52.023 | 346 | 97 | 4 | 1 | 343 | 1 | 280 | 2.53e-110 | 330 |
MS.gene074257.t1 | MTR_2g061500 | 76.744 | 129 | 30 | 0 | 1 | 129 | 1 | 129 | 9.90e-69 | 217 |
MS.gene074257.t1 | MTR_7g011710 | 88.235 | 85 | 10 | 0 | 55 | 139 | 1 | 85 | 7.67e-49 | 166 |
MS.gene074257.t1 | MTR_0024s0060 | 94.805 | 77 | 4 | 0 | 451 | 527 | 50 | 126 | 9.83e-45 | 154 |
MS.gene074257.t1 | MTR_4g103530 | 70.297 | 101 | 29 | 1 | 55 | 155 | 1 | 100 | 5.25e-44 | 154 |
MS.gene074257.t1 | MTR_6g033215 | 34.682 | 173 | 111 | 1 | 29 | 199 | 122 | 294 | 4.47e-34 | 130 |
MS.gene074257.t1 | MTR_8g463110 | 65.487 | 113 | 36 | 1 | 289 | 398 | 1 | 113 | 1.79e-30 | 126 |
MS.gene074257.t1 | MTR_0010s0370 | 34.302 | 172 | 107 | 3 | 11 | 177 | 7 | 177 | 3.76e-28 | 111 |
MS.gene074257.t1 | MTR_0010s0350 | 34.302 | 172 | 107 | 3 | 11 | 177 | 7 | 177 | 3.76e-28 | 111 |
MS.gene074257.t1 | MTR_1g036720 | 31.731 | 104 | 69 | 1 | 11 | 112 | 7 | 110 | 1.02e-13 | 67.8 |
MS.gene074257.t1 | MTR_7g106180 | 25.333 | 150 | 104 | 3 | 32 | 175 | 19 | 166 | 2.24e-12 | 67.4 |
MS.gene074257.t1 | MTR_4g020545 | 31.034 | 116 | 64 | 2 | 63 | 178 | 79 | 178 | 7.02e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074257.t1 | AT5G16060 | 73.913 | 69 | 18 | 0 | 459 | 527 | 1 | 69 | 6.43e-31 | 115 |
MS.gene074257.t1 | AT2G17920 | 26.291 | 213 | 151 | 3 | 8 | 216 | 9 | 219 | 1.23e-18 | 87.0 |
MS.gene074257.t1 | AT5G36228 | 26.943 | 193 | 137 | 2 | 36 | 226 | 39 | 229 | 9.09e-17 | 82.4 |
MS.gene074257.t1 | AT2G41590 | 26.047 | 215 | 149 | 4 | 8 | 216 | 9 | 219 | 1.25e-16 | 82.0 |
MS.gene074257.t1 | AT5G18636 | 26.977 | 215 | 147 | 4 | 8 | 216 | 9 | 219 | 1.98e-16 | 81.6 |
MS.gene074257.t1 | AT2G02103 | 27.442 | 215 | 146 | 4 | 8 | 216 | 9 | 219 | 2.02e-16 | 81.6 |
MS.gene074257.t1 | AT5G25200 | 26.977 | 215 | 147 | 4 | 8 | 216 | 9 | 219 | 2.16e-16 | 81.3 |
MS.gene074257.t1 | AT3G57587 | 25.822 | 213 | 152 | 3 | 8 | 216 | 9 | 219 | 6.09e-16 | 80.1 |
MS.gene074257.t1 | AT3G31430 | 26.374 | 182 | 128 | 3 | 36 | 215 | 134 | 311 | 7.56e-16 | 79.3 |
MS.gene074257.t1 | AT2G13450 | 26.087 | 184 | 130 | 4 | 35 | 215 | 38 | 218 | 1.07e-13 | 73.6 |
MS.gene074257.t1 | AT3G47920 | 25.676 | 148 | 106 | 2 | 71 | 216 | 3 | 148 | 1.88e-13 | 71.6 |
Find 138 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GACTCCTCAGAGTTGATATT+TGG | 0.207509 | 6.2:-14274019 | None:intergenic |
CTCTGTCGATTTGAACCATT+TGG | 0.283665 | 6.2:+14273304 | MS.gene074257:CDS |
CGCGGCACAACAGCTGGAAT+TGG | 0.287618 | 6.2:-14273722 | None:intergenic |
GTTTCAATTCCATCACAAAA+TGG | 0.292352 | 6.2:+14273193 | MS.gene074257:CDS |
CAGACTCGGTGGCTAGGTTA+AGG | 0.302707 | 6.2:-14273022 | None:intergenic |
CTGATGACGGTGTCCGCAAT+TGG | 0.305345 | 6.2:+14273633 | MS.gene074257:CDS |
ATTTGAACCATTTGGACATC+TGG | 0.317788 | 6.2:+14273312 | MS.gene074257:CDS |
CCTAGCTGACCGCGAGATTC+AGG | 0.319010 | 6.2:+14273085 | MS.gene074257:CDS |
TGAATCCTCAAAGGTTGAAA+TGG | 0.320325 | 6.2:+14279045 | MS.gene074257:CDS |
ATACTTGATCACTGTTTGAT+TGG | 0.333436 | 6.2:+14273056 | MS.gene074257:CDS |
GAGCCAACACGGGCAGTAAT+AGG | 0.333659 | 6.2:-14273671 | None:intergenic |
GGAGAACACTTTCTGTTGTT+TGG | 0.342847 | 6.2:+14279967 | MS.gene074257:CDS |
CAGGTCCACGGTCTCCCTTT+TGG | 0.353445 | 6.2:+14273338 | MS.gene074257:CDS |
CCGAATGTTGGTCAAGGTAT+AGG | 0.382070 | 6.2:+14273371 | MS.gene074257:CDS |
CATGTTTGAGAGCAGAAATC+TGG | 0.382675 | 6.2:-14273847 | None:intergenic |
ACAATCGAAACACGCTTGCC+TGG | 0.390301 | 6.2:-14273146 | None:intergenic |
CCTTCTCATCTCAATATTGC+TGG | 0.391864 | 6.2:+14272972 | MS.gene074257:CDS |
AGCCATACGCTCGCTGAAAT+AGG | 0.391985 | 6.2:-14273111 | None:intergenic |
CAAATTGAAAATTGATATTG+AGG | 0.397704 | 6.2:+14275136 | MS.gene074257:CDS |
TGATGACGGTGTCCGCAATT+GGG | 0.399168 | 6.2:+14273634 | MS.gene074257:CDS |
TTCTGTTGTTTGGCAATGTC+GGG | 0.399664 | 6.2:+14279977 | MS.gene074257:CDS |
TCGGCTTCAAACTTGATTGC+TGG | 0.401036 | 6.2:+14273959 | MS.gene074257:CDS |
GCTGGTCGCCCCATTGTCCT+TGG | 0.401153 | 6.2:+14273977 | MS.gene074257:CDS |
GACTCCAACTCGAACAAATC+CGG | 0.402388 | 6.2:-14273611 | None:intergenic |
AGACTCGGTGGCTAGGTTAA+GGG | 0.413831 | 6.2:-14273021 | None:intergenic |
TGTTGGCGCGGCACAACAGC+TGG | 0.414143 | 6.2:-14273728 | None:intergenic |
ACCACCCATTTCAACCTTTG+AGG | 0.417630 | 6.2:-14279050 | None:intergenic |
AATCAAACAGTGATCAAGTA+TGG | 0.418765 | 6.2:-14273054 | None:intergenic |
ATTGTCCTTGGATTACCTGC+TGG | 0.419937 | 6.2:+14273989 | MS.gene074257:CDS |
CACCACTAGCATAAAAGTTT+CGG | 0.420951 | 6.2:-14273778 | None:intergenic |
ATGGCTCGTGCTTGGAAGCC+AGG | 0.426942 | 6.2:+14273128 | MS.gene074257:CDS |
GGATACGGTCCATTACTATA+TGG | 0.430033 | 6.2:-14273262 | None:intergenic |
GGATTGTCGAAAACAATTGC+AGG | 0.434771 | 6.2:+14275157 | MS.gene074257:CDS |
GCAGGTAATCCAAGGACAAT+GGG | 0.439594 | 6.2:-14273986 | None:intergenic |
CTGTTCTTCTGAATCCTCAA+AGG | 0.445378 | 6.2:+14279036 | MS.gene074257:CDS |
AATTCAGAACCCGTATCATC+TGG | 0.446003 | 6.2:-14274043 | None:intergenic |
AAATTTAAATATGAGAAACT+TGG | 0.446273 | 6.2:+14273539 | MS.gene074257:CDS |
GGTCTCACCCTTGCTGAAGA+AGG | 0.447306 | 6.2:+14272993 | MS.gene074257:CDS |
TGGTTCAAATCGACAGAGAC+AGG | 0.447558 | 6.2:-14273299 | None:intergenic |
GGACACCACCAGGGACTTGT+TGG | 0.447634 | 6.2:-14273745 | None:intergenic |
TGTTTCAGGTGCGGATTGCT+TGG | 0.449390 | 6.2:+14273569 | MS.gene074257:CDS |
TTGTTACCTTCTTCTTCTAC+AGG | 0.456951 | 6.2:+14273932 | MS.gene074257:CDS |
TTCGGTTGAATGCAGCCAAA+AGG | 0.459459 | 6.2:-14273353 | None:intergenic |
CCTTTCAGCTCCTGCGACTG+AGG | 0.462379 | 6.2:+14279008 | MS.gene074257:intron |
AATAGAGTTACGGACATCAT+AGG | 0.469134 | 6.2:-14273417 | None:intergenic |
GCGGCACAACAGCTGGAATT+GGG | 0.474044 | 6.2:-14273721 | None:intergenic |
ACGGACTTTCAGACGCATAT+AGG | 0.475542 | 6.2:-14273447 | None:intergenic |
ACGGACCGTCCTCAAGAATA+CGG | 0.476194 | 6.2:-14273223 | None:intergenic |
TTTCTGTTGTTTGGCAATGT+CGG | 0.476827 | 6.2:+14279976 | MS.gene074257:CDS |
CCTATACCTTGACCAACATT+CGG | 0.476916 | 6.2:-14273371 | None:intergenic |
TGAGGAGTCTCCAGATGATA+CGG | 0.477080 | 6.2:+14274033 | MS.gene074257:CDS |
CCATCAGTAGGGACACCACC+AGG | 0.481579 | 6.2:-14273755 | None:intergenic |
TGCCTATTTCAGCGAGCGTA+TGG | 0.489265 | 6.2:+14273109 | MS.gene074257:CDS |
CTGAATTGAAGAAGAGAAAG+AGG | 0.490319 | 6.2:+14274059 | MS.gene074257:CDS |
GAATCCTCAAAGGTTGAAAT+GGG | 0.491464 | 6.2:+14279046 | MS.gene074257:CDS |
CAAAAGGGAGACCGTGGACC+TGG | 0.497401 | 6.2:-14273337 | None:intergenic |
GCGCGGACGACATGTCGGTT+TGG | 0.498637 | 6.2:+14275096 | MS.gene074257:CDS |
CATAGGATTTGAGCTCTCCT+AGG | 0.503764 | 6.2:-14273400 | None:intergenic |
GCGAGCGTATGGCTCGTGCT+TGG | 0.503834 | 6.2:+14273120 | MS.gene074257:CDS |
CAAGGTATAGGTAGTTTCCT+AGG | 0.509370 | 6.2:+14273383 | MS.gene074257:CDS |
ATGTGATTTCACCATTCTGA+AGG | 0.511369 | 6.2:-14274090 | None:intergenic |
GCAGTAATAGGCTTCAAGTC+AGG | 0.519143 | 6.2:-14273659 | None:intergenic |
CCTGGACCCAGATGTCCAAA+TGG | 0.520091 | 6.2:-14273319 | None:intergenic |
TTCTTCTTCTACAGGTAACT+CGG | 0.521316 | 6.2:+14273940 | MS.gene074257:CDS |
TTTGAACCATTTGGACATCT+GGG | 0.522382 | 6.2:+14273313 | MS.gene074257:CDS |
AGCTTTACGGAGCAAAATGA+AGG | 0.524128 | 6.2:+14279887 | MS.gene074257:intron |
GGTTGTCAACAGCAAGCATT+CGG | 0.525663 | 6.2:-14273826 | None:intergenic |
TTGCCCGGATTTGTTCGAGT+TGG | 0.526596 | 6.2:+14273607 | MS.gene074257:CDS |
TAAAAGTTTCGGCCATCAGT+AGG | 0.527470 | 6.2:-14273767 | None:intergenic |
CCTGAATCTCGCGGTCAGCT+AGG | 0.527672 | 6.2:-14273085 | None:intergenic |
TCGGTTGAATGCAGCCAAAA+GGG | 0.527729 | 6.2:-14273352 | None:intergenic |
CGATAATTTCCATATAGTAA+TGG | 0.528326 | 6.2:+14273253 | MS.gene074257:CDS |
GACATCTGGGTCCAGGTCCA+CGG | 0.529066 | 6.2:+14273326 | MS.gene074257:CDS |
CCATTTGGACATCTGGGTCC+AGG | 0.529652 | 6.2:+14273319 | MS.gene074257:CDS |
CCTGGTGGTGTCCCTACTGA+TGG | 0.532190 | 6.2:+14273755 | MS.gene074257:CDS |
AGGTGCTGTGAATAGAGTTA+CGG | 0.536220 | 6.2:-14273427 | None:intergenic |
ATATTTGGAAGCGGTCCAGC+AGG | 0.538609 | 6.2:-14274004 | None:intergenic |
GAAATATGCTGAGTGTGCTA+TGG | 0.542058 | 6.2:+14279944 | MS.gene074257:CDS |
GATGACGGTGTCCGCAATTG+GGG | 0.542604 | 6.2:+14273635 | MS.gene074257:CDS |
ACACACTGATAAAGTTTGCC+CGG | 0.543305 | 6.2:+14273592 | MS.gene074257:CDS |
GTGCCGCGCCAACAAGTCCC+TGG | 0.545699 | 6.2:+14273737 | MS.gene074257:CDS |
AAATATGCTGAGTGTGCTAT+GGG | 0.546403 | 6.2:+14279945 | MS.gene074257:CDS |
GGCTGCATTCAACCGAATGT+TGG | 0.550237 | 6.2:+14273359 | MS.gene074257:CDS |
ACTCCAACTCGAACAAATCC+GGG | 0.552252 | 6.2:-14273610 | None:intergenic |
ATTGAGATGAGAAGGATCCA+TGG | 0.555964 | 6.2:-14272964 | None:intergenic |
CCAGCAATATTGAGATGAGA+AGG | 0.557320 | 6.2:-14272972 | None:intergenic |
ATGTTTCAGACTCGGTGGCT+AGG | 0.557537 | 6.2:-14273028 | None:intergenic |
GGACAACACCAGGTTGGATA+CGG | 0.557706 | 6.2:-14273277 | None:intergenic |
GGTTAAACCTTCTTCAGCAA+GGG | 0.559658 | 6.2:-14273000 | None:intergenic |
GCTCTGCTGCTCATAACAAA+TGG | 0.559814 | 6.2:+14273690 | MS.gene074257:CDS |
TTTGCTGCTGATGGGGATGA+GGG | 0.559997 | 6.2:+14274115 | MS.gene074257:CDS |
GATGGAATTGAAACAGGAAT+CGG | 0.561181 | 6.2:-14273184 | None:intergenic |
AAGCCTATTACTGCCCGTGT+TGG | 0.565704 | 6.2:+14273668 | MS.gene074257:CDS |
AACAGAACAACCTCAGTCGC+AGG | 0.566314 | 6.2:-14279018 | None:intergenic |
GAGTTACCTGTAGAAGAAGA+AGG | 0.567956 | 6.2:-14273938 | None:intergenic |
GAGGAGTCTCCAGATGATAC+GGG | 0.568242 | 6.2:+14274034 | MS.gene074257:CDS |
AGGGAGCGGTGACATTAATA+CGG | 0.569148 | 6.2:-14273466 | None:intergenic |
GGGTTAAACCTTCTTCAGCA+AGG | 0.569775 | 6.2:-14273001 | None:intergenic |
AGCAGGTAATCCAAGGACAA+TGG | 0.575184 | 6.2:-14273987 | None:intergenic |
AAAAGTTTCGGCCATCAGTA+GGG | 0.584343 | 6.2:-14273766 | None:intergenic |
GGATGCTGCCCGTATTCTTG+AGG | 0.589247 | 6.2:+14273214 | MS.gene074257:CDS |
ACAGAGACAGGGACAACACC+AGG | 0.589318 | 6.2:-14273287 | None:intergenic |
GTTTCGATTGTCAAAACTGA+TGG | 0.590182 | 6.2:+14273158 | MS.gene074257:CDS |
TTCGAGTTGGAGTCTGATGA+CGG | 0.591216 | 6.2:+14273620 | MS.gene074257:CDS |
TCCTCAAAGGTTGAAATGGG+TGG | 0.593357 | 6.2:+14279049 | MS.gene074257:CDS |
GTGAAGAAGAAAGTCGAAGA+AGG | 0.598683 | 6.2:+14279100 | MS.gene074257:CDS |
GCGGTCCAGCAGGTAATCCA+AGG | 0.598979 | 6.2:-14273994 | None:intergenic |
TCAAGTCAGGACCCCAATTG+CGG | 0.604199 | 6.2:-14273646 | None:intergenic |
CGGACCGTCCTCAAGAATAC+GGG | 0.605163 | 6.2:-14273222 | None:intergenic |
ACGGAGCAAAATGAAGGTGA+AGG | 0.608873 | 6.2:+14279893 | MS.gene074257:CDS |
AGGATGCTGACCCTTCAGAA+TGG | 0.609247 | 6.2:+14274079 | MS.gene074257:CDS |
TCAGAGTTGATATTTGGAAG+CGG | 0.611255 | 6.2:-14274013 | None:intergenic |
TATGAGCAGCAGAGCCAACA+CGG | 0.611835 | 6.2:-14273682 | None:intergenic |
TGTGATTTCACCATTCTGAA+GGG | 0.612785 | 6.2:-14274089 | None:intergenic |
TGCATGCGCGGACGACATGT+CGG | 0.616440 | 6.2:+14275091 | MS.gene074257:CDS |
TATGGTGGATGTTTCAGACT+CGG | 0.621383 | 6.2:-14273036 | None:intergenic |
CAAACAGTGATCAAGTATGG+TGG | 0.622174 | 6.2:-14273051 | None:intergenic |
AGACAGGGACAACACCAGGT+TGG | 0.622978 | 6.2:-14273283 | None:intergenic |
AATCTTGTCAAAACAAAACA+TGG | 0.624436 | 6.2:+14273887 | MS.gene074257:CDS |
GCTGCCCGTATTCTTGAGGA+CGG | 0.624513 | 6.2:+14273218 | MS.gene074257:CDS |
TGCAGCCAAAAGGGAGACCG+TGG | 0.627289 | 6.2:-14273343 | None:intergenic |
CCACCAGGGACTTGTTGGCG+CGG | 0.628689 | 6.2:-14273740 | None:intergenic |
TGGAAAGTACGTGTCAGTAA+CGG | 0.636011 | 6.2:+14273500 | MS.gene074257:CDS |
TACAAGGCTATCTGCATGCG+CGG | 0.638021 | 6.2:+14275079 | MS.gene074257:CDS |
ATTCAACCGAATGTTGGTCA+AGG | 0.645233 | 6.2:+14273365 | MS.gene074257:CDS |
GTAATGGACCGTATCCAACC+TGG | 0.648100 | 6.2:+14273269 | MS.gene074257:CDS |
ATACTCATGATATTGTTACA+AGG | 0.649922 | 6.2:+14275063 | MS.gene074257:CDS |
GTATTCTTGAGGACGGTCCG+TGG | 0.660005 | 6.2:+14273225 | MS.gene074257:CDS |
GGTTCAAATCGACAGAGACA+GGG | 0.661504 | 6.2:-14273298 | None:intergenic |
ATGAGCAGCAGAGCCAACAC+GGG | 0.665368 | 6.2:-14273681 | None:intergenic |
AATAGGCAGCCTGAATCTCG+CGG | 0.670036 | 6.2:-14273094 | None:intergenic |
GGTGGATGTTTCAGACTCGG+TGG | 0.677598 | 6.2:-14273033 | None:intergenic |
TGGAAATTATCGTACAGCCA+CGG | 0.677628 | 6.2:-14273242 | None:intergenic |
CATCAGTAGGGACACCACCA+GGG | 0.683261 | 6.2:-14273754 | None:intergenic |
CAGGTAATCCAAGGACAATG+GGG | 0.695542 | 6.2:-14273985 | None:intergenic |
CCGCGCCAACAAGTCCCTGG+TGG | 0.707620 | 6.2:+14273740 | MS.gene074257:CDS |
GCTTCCAAATATCAACTCTG+AGG | 0.722304 | 6.2:+14274015 | MS.gene074257:CDS |
AATATGCTGAGTGTGCTATG+GGG | 0.810113 | 6.2:+14279946 | MS.gene074257:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.2 | gene | 14272966 | 14280040 | 14272966 | ID=MS.gene074257 |
chr6.2 | mRNA | 14272966 | 14280040 | 14272966 | ID=MS.gene074257.t1;Parent=MS.gene074257 |
chr6.2 | exon | 14272966 | 14274159 | 14272966 | ID=MS.gene074257.t1.exon1;Parent=MS.gene074257.t1 |
chr6.2 | CDS | 14272966 | 14274159 | 14272966 | ID=cds.MS.gene074257.t1;Parent=MS.gene074257.t1 |
chr6.2 | exon | 14275056 | 14275187 | 14275056 | ID=MS.gene074257.t1.exon2;Parent=MS.gene074257.t1 |
chr6.2 | CDS | 14275056 | 14275187 | 14275056 | ID=cds.MS.gene074257.t1;Parent=MS.gene074257.t1 |
chr6.2 | exon | 14279016 | 14279121 | 14279016 | ID=MS.gene074257.t1.exon3;Parent=MS.gene074257.t1 |
chr6.2 | CDS | 14279016 | 14279121 | 14279016 | ID=cds.MS.gene074257.t1;Parent=MS.gene074257.t1 |
chr6.2 | exon | 14279889 | 14280040 | 14279889 | ID=MS.gene074257.t1.exon4;Parent=MS.gene074257.t1 |
chr6.2 | CDS | 14279889 | 14280040 | 14279889 | ID=cds.MS.gene074257.t1;Parent=MS.gene074257.t1 |
Gene Sequence |
Protein sequence |