AlfalfaGEDB | MS.gene055879

M. sativa cultivar XinJiangDaYe / MS.gene055879

KEGG: -
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: PF08387.13 PF12937.10

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene055879.t1	KEH19755.1	75.6	377	56	4	31	402	149	494	2.10E-150	542.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene055879.t1	Q9LX51	36.6	194	108	7	30	215	7	193	8.7e-20	99.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene055879.t1	A0A072U1T6	75.6	377	56	4	31	402	149	494	1.5e-150	542.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene055879	MS.gene07666	PPI
MS.gene63095	MS.gene055879	PPI
MS.gene055880	MS.gene055879	PPI
MS.gene043123	MS.gene055879	PPI
MS.gene055879	MS.gene72962	PPI
MS.gene25412	MS.gene055879	PPI
MS.gene055879	MS.gene09370	PPI
MS.gene055879	MS.gene043122	PPI
MS.gene25410	MS.gene055879	PPI
MS.gene055879	MS.gene021313	PPI
MS.gene055879	MS.gene92095	PPI
MS.gene055879	MS.gene07664	PPI
MS.gene072985	MS.gene055879	PPI
MS.gene055879	MS.gene89955	PPI
MS.gene055879	MS.gene84248	PPI
MS.gene072984	MS.gene055879	PPI
MS.gene055879	MS.gene007875	PPI
MS.gene055879	MS.gene72956	PPI
MS.gene055879	MS.gene09363	PPI
MS.gene09364	MS.gene055879	PPI
MS.gene055879	MS.gene062526	PPI
MS.gene09360	MS.gene055879	PPI
MS.gene055879	MS.gene72961	PPI
MS.gene25411	MS.gene055879	PPI
MS.gene72959	MS.gene055879	PPI
MS.gene055879	MS.gene26444	PPI
MS.gene34739	MS.gene055879	PPI
MS.gene34731	MS.gene055879	PPI
MS.gene065516	MS.gene055879	PPI
MS.gene055879	MS.gene014792	PPI
MS.gene055879	MS.gene89963	PPI
MS.gene055879	MS.gene98598	PPI
MS.gene055879	MS.gene60521	PPI
MS.gene067702	MS.gene055879	PPI
MS.gene63212	MS.gene055879	PPI
MS.gene055879	MS.gene25296	PPI
MS.gene055879	MS.gene050947	PPI
MS.gene055879	MS.gene07669	PPI
MS.gene055879	MS.gene07660	PPI
MS.gene055879	MS.gene03749	PPI
MS.gene055879	MS.gene056517	PPI
MS.gene044445	MS.gene055879	PPI
MS.gene055879	MS.gene073176	PPI
MS.gene055879	MS.gene72952	PPI
MS.gene038427	MS.gene055879	PPI
MS.gene055879	MS.gene072983	PPI
MS.gene055879	MS.gene72957	PPI
MS.gene055879	MS.gene07665	PPI
MS.gene055879	MS.gene050744	PPI
MS.gene03750	MS.gene055879	PPI
MS.gene055879	MS.gene07668	PPI
MS.gene055879	MS.gene060769	PPI
MS.gene055879	MS.gene09367	PPI
MS.gene63210	MS.gene055879	PPI
MS.gene72960	MS.gene055879	PPI
MS.gene89956	MS.gene055879	PPI
MS.gene055879	MS.gene03753	PPI
MS.gene055879	MS.gene053514	PPI
MS.gene055879	MS.gene09992	PPI
MS.gene055879	MS.gene93027	PPI
MS.gene065234	MS.gene055879	PPI
MS.gene34753	MS.gene055879	PPI
MS.gene61631	MS.gene055879	PPI
MS.gene055879	MS.gene03755	PPI
MS.gene055879	MS.gene89961	PPI
MS.gene055879	MS.gene63218	PPI
MS.gene055879	MS.gene91201	PPI
MS.gene055879	MS.gene03757	PPI
MS.gene03752	MS.gene055879	PPI
MS.gene005794	MS.gene055879	PPI
MS.gene055879	MS.gene36065	PPI
MS.gene055879	MS.gene07678	PPI
MS.gene055879	MS.gene047839	PPI
MS.gene78146	MS.gene055879	PPI
MS.gene055879	MS.gene09371	PPI
MS.gene49513	MS.gene055879	PPI
MS.gene055879	MS.gene017193	PPI
MS.gene69850	MS.gene055879	PPI
MS.gene055879	MS.gene63185	PPI
MS.gene055879	MS.gene95710	PPI
MS.gene98269	MS.gene055879	PPI
MS.gene63214	MS.gene055879	PPI
MS.gene32588	MS.gene055879	PPI
MS.gene63217	MS.gene055879	PPI
MS.gene032296	MS.gene055879	PPI
MS.gene055879	MS.gene07659	PPI
MS.gene68082	MS.gene055879	PPI
MS.gene36067	MS.gene055879	PPI
MS.gene89957	MS.gene055879	PPI
MS.gene055879	MS.gene07667	PPI
MS.gene055879	MS.gene99983	PPI
MS.gene055879	MS.gene64984	PPI
MS.gene055879	MS.gene07658	PPI
MS.gene055879	MS.gene07674	PPI
MS.gene060771	MS.gene055879	PPI
MS.gene055879	MS.gene34215	PPI
MS.gene055879	MS.gene88183	PPI
MS.gene63104	MS.gene055879	PPI
MS.gene92611	MS.gene055879	PPI
MS.gene055879	MS.gene03759	PPI
MS.gene055879	MS.gene03748	PPI
MS.gene055879	MS.gene48654	PPI
MS.gene053313	MS.gene055879	PPI
MS.gene25396	MS.gene055879	PPI
MS.gene055879	MS.gene34737	PPI
MS.gene09362	MS.gene055879	PPI
MS.gene055879	MS.gene063490	PPI
MS.gene055879	MS.gene84247	PPI
MS.gene055879	MS.gene03760	PPI
MS.gene055879	MS.gene03756	PPI
MS.gene48656	MS.gene055879	PPI
MS.gene055879	MS.gene062282	PPI
MS.gene055879	MS.gene060770	PPI
MS.gene63223	MS.gene055879	PPI
MS.gene072547	MS.gene055879	PPI
MS.gene055879	MS.gene72955	PPI
MS.gene055879	MS.gene63224	PPI
MS.gene055879	MS.gene34736	PPI
MS.gene055879	MS.gene25414	PPI
MS.gene72963	MS.gene055879	PPI
MS.gene055879	MS.gene34730	PPI
MS.gene055879	MS.gene25418	PPI
MS.gene34735	MS.gene055879	PPI
MS.gene055879	MS.gene005795	PPI
MS.gene09368	MS.gene055879	PPI
MS.gene054411	MS.gene055879	PPI
MS.gene055879	MS.gene34733	PPI
MS.gene055879	MS.gene85640	PPI
MS.gene055879	MS.gene03758	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene055879.t1	MTR_8g467790	68.330	461	56	5	1	402	65	494	0.0	556
MS.gene055879.t1	MTR_8g070950	64.783	460	139	7	3	461	1	438	0.0	555
MS.gene055879.t1	MTR_8g062080	55.814	473	173	12	3	462	1	450	2.85e-168	481
MS.gene055879.t1	MTR_8g062010	59.410	441	155	9	30	461	9	434	8.12e-165	472
MS.gene055879.t1	MTR_8g058965	56.000	475	161	10	20	462	3	461	1.24e-162	467
MS.gene055879.t1	MTR_8g062310	57.077	431	157	7	29	457	24	428	6.84e-162	464
MS.gene055879.t1	MTR_8g469020	54.095	464	166	10	30	461	7	455	1.74e-158	456
MS.gene055879.t1	MTR_8g062300	51.793	502	180	13	3	462	1	482	1.04e-151	440
MS.gene055879.t1	MTR_4g050250	52.283	438	154	13	3	403	1	420	1.25e-132	390
MS.gene055879.t1	MTR_2g083840	42.072	473	225	16	9	457	10	457	7.81e-90	281
MS.gene055879.t1	MTR_8g058970	38.833	497	239	17	5	457	2	477	2.37e-84	267
MS.gene055879.t1	MTR_8g468810	38.462	481	252	16	3	457	1	463	3.96e-84	266
MS.gene055879.t1	MTR_8g062270	39.606	457	233	15	27	456	13	453	1.64e-83	265
MS.gene055879.t1	MTR_4g032730	35.849	477	255	11	18	456	3	466	2.39e-78	251
MS.gene055879.t1	MTR_8g014260	39.175	485	231	22	3	457	1	451	4.07e-78	250
MS.gene055879.t1	MTR_8g467800	39.103	468	234	16	19	457	8	453	1.58e-72	236
MS.gene055879.t1	MTR_5g092960	36.170	470	254	13	18	456	7	461	1.29e-70	231
MS.gene055879.t1	MTR_2g086020	75.862	145	35	0	317	461	175	319	2.74e-70	226
MS.gene055879.t1	MTR_2g086020	44.000	150	58	5	57	194	2	137	6.67e-25	105
MS.gene055879.t1	MTR_8g445780	39.563	412	204	17	20	410	3	390	3.50e-70	228
MS.gene055879.t1	MTR_8g468760	37.310	461	218	15	23	456	2	418	5.51e-66	218
MS.gene055879.t1	MTR_8g468840	37.251	451	242	16	30	455	14	448	7.36e-66	218
MS.gene055879.t1	MTR_8g468810	38.046	389	199	15	3	367	1	371	2.25e-59	199
MS.gene055879.t1	MTR_8g014160	34.968	469	222	16	9	457	20	425	1.06e-52	183
MS.gene055879.t1	MTR_5g092960	36.870	377	199	11	18	367	7	371	2.81e-50	176
MS.gene055879.t1	MTR_8g468810	37.651	332	173	12	3	317	1	315	1.82e-49	172
MS.gene055879.t1	MTR_8g468810	37.651	332	173	12	3	317	1	315	2.59e-49	171
MS.gene055879.t1	MTR_8g468810	37.069	348	185	12	3	333	1	331	3.58e-49	172
MS.gene055879.t1	MTR_8g077460	33.925	451	204	21	23	457	3	375	5.73e-47	166
MS.gene055879.t1	MTR_8g014210	39.669	242	125	8	226	457	1	231	2.55e-40	144
MS.gene055879.t1	MTR_8g467800	40.532	301	142	12	19	297	8	293	5.98e-39	144
MS.gene055879.t1	MTR_4g024710	38.000	300	154	13	175	457	63	347	8.85e-39	144
MS.gene055879.t1	MTR_5g021550	44.633	177	66	10	7	169	4	162	1.08e-28	111
MS.gene055879.t1	MTR_7g056433	29.111	450	233	20	26	457	8	389	7.80e-28	114
MS.gene055879.t1	MTR_3g099800	60.920	87	33	1	369	454	19	105	9.92e-28	106
MS.gene055879.t1	MTR_1g041245	28.256	453	225	21	29	457	10	386	1.28e-27	114
MS.gene055879.t1	MTR_4g024745	35.640	289	156	13	168	440	10	284	1.90e-27	111
MS.gene055879.t1	MTR_5g008950	26.786	448	223	19	32	457	1	365	7.05e-25	105
MS.gene055879.t1	MTR_3g108150	27.816	435	245	18	30	456	13	386	9.49e-25	105
MS.gene055879.t1	MTR_8g014290	40.000	160	82	8	23	170	3	160	3.28e-23	96.3
MS.gene055879.t1	MTR_5g084070	28.345	441	273	18	24	449	7	419	7.67e-22	97.8
MS.gene055879.t1	MTR_7g088260	25.764	458	270	15	6	457	69	462	1.62e-21	97.1
MS.gene055879.t1	MTR_2g007450	28.105	459	247	20	26	454	12	417	2.65e-21	96.3
MS.gene055879.t1	MTR_7g032380	34.673	199	105	8	29	217	10	193	5.16e-21	94.4
MS.gene055879.t1	MTR_5g080710	27.488	422	271	14	22	429	25	425	5.33e-21	95.5
MS.gene055879.t1	MTR_3g023630	26.292	445	244	20	24	457	2	373	5.64e-21	94.7
MS.gene055879.t1	MTR_6g011460	25.828	453	236	18	29	457	45	421	2.90e-19	90.1
MS.gene055879.t1	MTR_4g024720	34.375	192	85	9	3	169	1	176	3.44e-19	86.3
MS.gene055879.t1	MTR_7g033915	26.411	443	225	19	28	456	9	364	6.79e-19	88.6
MS.gene055879.t1	MTR_7g056420	27.378	431	220	19	30	449	9	357	7.71e-19	90.1
MS.gene055879.t1	MTR_7g056430	27.378	431	220	19	30	449	9	357	9.05e-19	90.1
MS.gene055879.t1	MTR_7g098480	25.214	468	256	16	3	456	1	388	1.03e-18	89.0
MS.gene055879.t1	MTR_1g108820	26.185	443	254	17	24	454	2	383	1.29e-18	87.8
MS.gene055879.t1	MTR_5g073420	25.167	449	236	21	29	456	10	379	1.78e-18	87.4
MS.gene055879.t1	MTR_7g056447	36.548	197	94	9	30	214	9	186	1.98e-18	85.9
MS.gene055879.t1	MTR_3g108560	27.211	441	244	20	24	456	17	388	2.11e-18	87.0
MS.gene055879.t1	MTR_7g055943	35.533	197	103	11	29	215	39	221	5.21e-18	86.3
MS.gene055879.t1	MTR_8g085430	35.149	202	107	10	29	217	10	200	3.00e-17	83.2
MS.gene055879.t1	MTR_5g008920	34.328	201	108	8	25	217	7	191	3.16e-17	83.6
MS.gene055879.t1	MTR_2g036470	23.956	455	269	17	18	456	2	395	6.68e-17	82.8
MS.gene055879.t1	MTR_8g014230	42.857	84	46	2	367	450	17	98	9.48e-17	76.3
MS.gene055879.t1	MTR_6g022500	33.990	203	110	9	23	215	94	282	9.57e-17	82.8
MS.gene055879.t1	MTR_2g007500	34.826	201	93	10	29	217	13	187	1.17e-16	81.3
MS.gene055879.t1	MTR_6g022360	31.858	226	117	10	6	221	19	217	4.63e-16	80.1
MS.gene055879.t1	MTR_4g098590	26.442	416	221	18	32	424	1	354	1.37e-15	78.6
MS.gene055879.t1	MTR_7g114710	31.156	199	118	9	29	220	12	198	1.92e-15	78.2
MS.gene055879.t1	MTR_7g026500	32.864	213	120	9	18	217	2	204	1.94e-15	78.2
MS.gene055879.t1	MTR_7g033990	31.841	201	119	7	29	221	10	200	2.09e-15	78.2
MS.gene055879.t1	MTR_7g032370	32.967	182	98	8	45	217	5	171	2.11e-15	77.8
MS.gene055879.t1	MTR_7g032370	33.333	111	72	2	348	457	243	352	8.95e-11	63.5
MS.gene055879.t1	MTR_5g058000	32.683	205	116	9	24	220	2	192	4.49e-15	77.0
MS.gene055879.t1	MTR_7g115270	32.353	204	109	10	30	217	12	202	4.82e-15	77.0
MS.gene055879.t1	MTR_6g044560	25.257	487	219	23	23	457	171	564	6.58e-15	77.4
MS.gene055879.t1	MTR_7g098510	32.889	225	115	14	3	217	1	199	8.77e-15	76.3
MS.gene055879.t1	MTR_7g098510	35.455	110	71	0	348	457	282	391	4.87e-12	67.8
MS.gene055879.t1	MTR_7g034110	33.824	204	106	9	28	218	9	196	1.08e-14	75.5
MS.gene055879.t1	MTR_6g044572	25.572	481	213	24	29	457	1	388	1.90e-14	75.1
MS.gene055879.t1	MTR_5g061680	31.220	205	120	9	22	217	3	195	3.81e-14	73.6
MS.gene055879.t1	MTR_5g045510	30.102	196	119	7	29	218	11	194	8.05e-14	73.2
MS.gene055879.t1	MTR_4g039440	24.204	471	245	20	20	457	21	412	9.62e-14	73.2
MS.gene055879.t1	MTR_1089s0010	29.064	203	121	8	24	217	2	190	9.90e-14	72.8
MS.gene055879.t1	MTR_4g134150	35.859	198	94	11	30	217	14	188	1.46e-13	70.5
MS.gene055879.t1	MTR_3g107120	31.905	210	111	10	28	217	7	204	1.87e-13	72.4
MS.gene055879.t1	MTR_4g093690	31.336	217	116	11	26	227	14	212	2.02e-13	70.9
MS.gene055879.t1	MTR_1g085120	32.990	194	106	9	30	213	179	358	2.61e-13	72.0
MS.gene055879.t1	MTR_1g085120	32.990	194	106	9	30	213	167	346	2.68e-13	72.4
MS.gene055879.t1	MTR_3g105060	32.663	199	108	10	29	217	13	195	3.09e-13	71.2
MS.gene055879.t1	MTR_2g008310	25.682	440	247	16	29	457	1	371	3.26e-13	71.6
MS.gene055879.t1	MTR_1g085120	32.990	194	106	9	30	213	92	271	3.89e-13	71.6
MS.gene055879.t1	MTR_3g109982	30.472	233	115	10	30	256	13	204	5.35e-13	71.6
MS.gene055879.t1	MTR_3g110010	30.472	233	115	10	30	256	13	204	7.72e-13	71.2
MS.gene055879.t1	MTR_3g036250	29.949	197	117	9	30	217	5	189	1.57e-12	69.3
MS.gene055879.t1	MTR_7g033945	32.571	175	100	8	28	195	9	172	1.81e-12	66.2
MS.gene055879.t1	MTR_1g014450	32.453	265	154	11	30	279	16	270	3.18e-12	68.6
MS.gene055879.t1	MTR_5g012840	26.988	415	196	16	48	457	6	318	3.21e-12	67.8
MS.gene055879.t1	MTR_4g080590	25.355	422	265	14	30	425	23	420	4.80e-12	68.2
MS.gene055879.t1	MTR_4g024770	45.455	77	30	3	2	78	7	71	6.03e-12	61.6
MS.gene055879.t1	MTR_7g034115	32.673	202	107	9	29	218	10	194	2.32e-11	65.9
MS.gene055879.t1	MTR_2g101950	30.460	174	95	7	2	173	62	211	4.12e-11	64.7
MS.gene055879.t1	MTR_2g101950	30.460	174	95	7	2	173	20	169	5.42e-11	64.7
MS.gene055879.t1	MTR_1g038710	31.441	229	119	11	30	240	19	227	5.85e-11	64.7
MS.gene055879.t1	MTR_2g101950	30.460	174	95	7	2	173	62	211	7.02e-11	64.3
MS.gene055879.t1	MTR_2g101950	30.460	174	95	7	2	173	61	210	7.12e-11	64.3
MS.gene055879.t1	MTR_4g056040	31.760	233	102	11	26	215	5	223	7.69e-11	64.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene055879.t1	AT2G26030	27.862	463	268	21	30	454	4	438	2.62e-22	99.4
MS.gene055879.t1	AT2G26030	27.862	463	268	21	30	454	4	438	2.62e-22	99.4
MS.gene055879.t1	AT3G59200	36.598	194	108	7	30	215	7	193	6.80e-22	97.4
MS.gene055879.t1	AT3G59200	36.598	194	108	7	30	215	7	193	3.35e-21	96.7
MS.gene055879.t1	AT4G26340	29.139	453	263	21	29	457	1	419	1.34e-20	94.0
MS.gene055879.t1	AT5G53840	27.111	450	273	20	30	454	18	437	5.00e-20	92.8
MS.gene055879.t1	AT3G42770	26.106	452	277	16	32	455	1	423	5.30e-20	93.2
MS.gene055879.t1	AT1G16930	25.309	486	280	20	17	457	2	449	1.10e-19	91.7
MS.gene055879.t1	AT1G16930	25.309	486	280	20	17	457	2	449	1.10e-19	91.7
MS.gene055879.t1	AT1G16930	25.309	486	280	20	17	457	2	449	1.10e-19	91.7
MS.gene055879.t1	AT5G56560	26.484	438	286	14	31	457	6	418	1.18e-19	91.3
MS.gene055879.t1	AT5G56420	25.503	447	284	16	30	457	6	422	2.27e-19	90.5
MS.gene055879.t1	AT5G56420	25.503	447	284	16	30	457	6	422	2.27e-19	90.5
MS.gene055879.t1	AT5G56420	25.503	447	284	16	30	457	6	422	2.27e-19	90.5
MS.gene055879.t1	AT4G00160	28.825	451	280	20	30	459	16	446	3.72e-19	90.1
MS.gene055879.t1	AT4G10400	26.244	442	278	14	29	456	1	408	5.79e-19	89.0
MS.gene055879.t1	AT4G10400	26.244	442	278	14	29	456	1	408	5.79e-19	89.0
MS.gene055879.t1	AT4G10400	26.244	442	278	14	29	456	1	408	5.79e-19	89.0
MS.gene055879.t1	AT1G69630	25.641	468	300	14	13	450	1	450	9.77e-19	89.0
MS.gene055879.t1	AT3G52680	30.853	457	261	22	30	459	21	449	1.09e-18	88.6
MS.gene055879.t1	AT5G53635	26.134	463	265	16	32	456	2	425	1.44e-18	88.2
MS.gene055879.t1	AT5G56400	25.780	481	282	21	12	457	15	455	1.89e-18	87.8
MS.gene055879.t1	AT5G50270	29.148	446	243	19	29	439	1	408	4.20e-18	86.7
MS.gene055879.t1	AT2G04230	29.777	403	252	17	30	416	13	400	6.82e-18	86.3
MS.gene055879.t1	AT1G78750	26.042	480	292	21	13	454	1	455	7.91e-18	86.3
MS.gene055879.t1	AT1G78750	26.042	480	292	21	13	454	1	455	7.91e-18	86.3
MS.gene055879.t1	AT2G29930	26.625	477	270	22	30	456	12	458	1.14e-17	85.5
MS.gene055879.t1	AT2G29930	26.625	477	270	22	30	456	12	458	1.14e-17	85.5
MS.gene055879.t1	AT5G44950	27.074	458	275	21	30	454	4	435	1.20e-17	85.5
MS.gene055879.t1	AT4G13965	26.681	461	256	20	28	454	8	420	3.12e-17	84.0
MS.gene055879.t1	AT3G59230	36.139	202	111	8	30	218	12	208	3.34e-17	84.3
MS.gene055879.t1	AT5G56440	27.215	474	254	20	29	456	1	429	4.89e-17	83.6
MS.gene055879.t1	AT4G13985	31.604	212	128	8	14	215	3	207	1.70e-16	82.0
MS.gene055879.t1	AT5G56370	26.096	456	273	18	29	456	1	420	3.43e-16	80.9
MS.gene055879.t1	AT5G56370	26.096	456	273	18	29	456	1	420	3.43e-16	80.9
MS.gene055879.t1	AT1G13780	24.726	457	298	15	30	454	10	452	1.27e-15	79.3
MS.gene055879.t1	AT5G44980	27.872	470	260	20	28	456	2	433	4.64e-15	77.4
MS.gene055879.t1	AT5G44980	27.872	470	260	20	28	456	2	433	4.64e-15	77.4
MS.gene055879.t1	AT4G14103	33.508	191	116	7	30	215	8	192	6.87e-15	77.0
MS.gene055879.t1	AT4G14103	33.508	191	116	7	30	215	8	192	9.21e-15	76.3
MS.gene055879.t1	AT4G14103	33.508	191	116	7	30	215	8	192	9.21e-15	76.3
MS.gene055879.t1	AT4G00320	32.000	200	118	9	30	215	13	208	1.45e-14	76.3
MS.gene055879.t1	AT5G56690	32.804	189	117	6	32	215	4	187	1.87e-14	75.5
MS.gene055879.t1	AT1G48400	32.273	220	135	9	30	243	10	221	1.98e-14	75.9
MS.gene055879.t1	AT1G48400	31.818	220	136	8	30	243	10	221	2.68e-14	75.5
MS.gene055879.t1	AT5G60610	27.033	418	245	20	29	421	1	383	4.96e-14	73.9
MS.gene055879.t1	AT5G60610	27.033	418	245	20	29	421	1	383	4.96e-14	73.9
MS.gene055879.t1	AT3G59190	31.818	198	121	7	30	218	12	204	5.94e-14	73.9
MS.gene055879.t1	AT1G06630	32.995	197	115	7	30	215	12	202	6.87e-14	72.8
MS.gene055879.t1	AT4G09920	31.980	197	117	7	29	219	1	186	8.09e-14	72.4
MS.gene055879.t1	AT4G09920	31.980	197	117	7	29	219	1	186	8.09e-14	72.4
MS.gene055879.t1	AT4G09920	31.980	197	117	7	29	219	1	186	8.09e-14	72.4
MS.gene055879.t1	AT4G09920	31.980	197	117	7	29	219	1	186	9.56e-14	72.4
MS.gene055879.t1	AT4G09920	31.980	197	117	7	29	219	1	186	9.56e-14	72.4
MS.gene055879.t1	AT3G59190	31.795	195	119	7	30	215	12	201	1.05e-13	73.6
MS.gene055879.t1	AT3G58940	30.732	205	116	8	29	215	1	197	1.12e-13	73.6
MS.gene055879.t1	AT3G58940	30.732	205	116	8	29	215	1	197	1.12e-13	73.6
MS.gene055879.t1	AT3G52680	35.683	227	118	12	30	246	21	229	1.31e-13	72.4
MS.gene055879.t1	AT5G41840	31.000	200	121	9	30	215	14	210	3.19e-13	72.0
MS.gene055879.t1	AT3G58930	28.421	190	108	6	29	194	1	186	3.53e-13	71.6
MS.gene055879.t1	AT3G58930	28.421	190	108	6	29	194	1	186	3.53e-13	71.6
MS.gene055879.t1	AT1G80470	31.416	226	127	7	3	223	1	203	3.54e-13	71.6
MS.gene055879.t1	AT4G13960	33.854	192	116	6	29	215	1	186	3.57e-13	71.6
MS.gene055879.t1	AT4G13960	33.854	192	116	6	29	215	1	186	3.57e-13	71.6
MS.gene055879.t1	AT1G32375	31.313	198	111	8	29	215	1	184	5.35e-13	70.9
MS.gene055879.t1	AT1G32375	31.313	198	111	8	29	215	1	184	5.35e-13	70.9
MS.gene055879.t1	AT5G50270	34.673	199	102	8	29	215	1	183	9.19e-13	69.3
MS.gene055879.t1	AT5G22720	29.362	235	128	11	3	223	1	211	2.36e-12	69.3
MS.gene055879.t1	AT5G56380	25.275	455	298	18	29	457	1	439	3.12e-12	68.6
MS.gene055879.t1	AT5G56380	25.275	455	298	18	29	457	1	439	3.12e-12	68.6
MS.gene055879.t1	AT1G66310	27.830	212	125	8	14	215	3	196	3.18e-12	68.6
MS.gene055879.t1	AT1G66320	28.767	219	123	11	8	215	11	207	9.39e-12	67.4
MS.gene055879.t1	AT1G55030	25.436	401	255	15	30	415	9	380	1.72e-11	66.2
MS.gene055879.t1	AT1G55030	25.436	401	255	15	30	415	19	390	1.98e-11	66.2
MS.gene055879.t1	AT5G38590	32.812	192	112	7	29	215	1	180	2.11e-11	65.1
MS.gene055879.t1	AT5G22610	23.043	460	291	15	30	462	18	441	2.24e-11	66.2
MS.gene055879.t1	AT5G53640	30.808	198	110	8	30	219	22	200	3.17e-11	63.5
MS.gene055879.t1	AT5G38590	32.812	192	112	7	29	215	1	180	3.96e-11	65.1
MS.gene055879.t1	AT3G58930	36.957	92	56	2	29	119	1	91	4.44e-11	65.1
MS.gene055879.t1	AT3G58930	36.957	92	56	2	29	119	1	91	4.44e-11	65.1
MS.gene055879.t1	AT3G58930	36.957	92	56	2	29	119	1	91	4.44e-11	65.1
MS.gene055879.t1	AT3G56780	32.474	194	108	9	32	218	9	186	4.73e-11	64.7
MS.gene055879.t1	AT5G38392	29.744	195	128	5	29	215	1	194	5.24e-11	62.8
MS.gene055879.t1	AT3G56780	32.474	194	108	9	32	218	9	186	5.34e-11	64.7
MS.gene055879.t1	AT5G35995	33.161	193	108	8	30	215	5	183	5.80e-11	64.7
MS.gene055879.t1	AT5G35995	33.161	193	108	8	30	215	5	183	5.80e-11	64.7
MS.gene055879.t1	AT3G56780	32.474	194	108	9	32	218	9	186	6.21e-11	64.7
MS.gene055879.t1	AT3G49030	25.336	446	262	21	30	456	21	414	9.04e-11	63.9
MS.gene055879.t1	AT3G49150	31.122	196	115	8	30	215	16	201	9.44e-11	64.3

Find 109 sgRNAs with CRISPR-Local

Find 153 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AATGAAGGTTGAACATTCTT+TGG	0.224083	8.3:-42647092	MS.gene055879:CDS
GGTTGTTGCAGTTGATAAAA+AGG	0.239466	8.3:+42647535	None:intergenic
GTCAACAAACCTTGCTGCTT+TGG	0.276221	8.3:+42646434	None:intergenic
CTCGAAAATGGCGCAACCTT+TGG	0.284907	8.3:-42647830	MS.gene055879:CDS
TGTTGGCATCTTTCATAGTA+TGG	0.287676	8.3:-42646822	MS.gene055879:CDS
CGAGTCTCGTCTCTCGAAAA+TGG	0.288200	8.3:-42647842	MS.gene055879:CDS
TTTGCGGAACGGACTTGTTT+TGG	0.289001	8.3:-42646163	MS.gene055879:CDS
CCAAGTGAAATTGTCATTGA+TGG	0.289134	8.3:+42646895	None:intergenic
TCGAAAATGGCGCAACCTTT+GGG	0.333472	8.3:-42647829	MS.gene055879:CDS
CTCGGATGCTGTTGAGAATA+GGG	0.353987	8.3:+42646750	None:intergenic
TGGACTTACTTTGAGTTTGT+TGG	0.358033	8.3:-42646875	MS.gene055879:CDS
TGAAAACACTGCAGTCTTCT+CGG	0.360875	8.3:-42647124	MS.gene055879:intron
TCTCTCTGGCTGCCCCGTGC+TGG	0.363123	8.3:-42647005	MS.gene055879:CDS
GACCCAGCCGTATCTTCTTA+AGG	0.367551	8.3:-42646030	None:intergenic
TCGAAAGTTGCCTTTCTCTC+TGG	0.376627	8.3:-42647019	MS.gene055879:CDS
AACTCTGGATAATTTAGAAC+AGG	0.379423	8.3:+42646556	None:intergenic
GAGCACACTGTCAACGTAAT+AGG	0.392365	8.3:+42647719	None:intergenic
CACGGGGCAGCCAGAGAGAA+AGG	0.396494	8.3:+42647009	None:intergenic
TCTCGGATGCTGTTGAGAAT+AGG	0.418151	8.3:+42646749	None:intergenic
TTGATACACGGAAATGACTA+TGG	0.419324	8.3:-42648021	None:intergenic
ATTGATGGATTTCAACCTCT+TGG	0.423461	8.3:+42646910	None:intergenic
GGTCTTTAACCTCGATGATT+CGG	0.427275	8.3:-42647796	MS.gene055879:CDS
ATATCCTTCTACGTGAATAT+AGG	0.427940	8.3:+42646224	None:intergenic
CGACAGGATAAGCACTTTGC+CGG	0.435082	8.3:-42647922	MS.gene055879:CDS
GATGTCACAATGGGCATTGT+TGG	0.445070	8.3:-42646839	MS.gene055879:CDS
CTGCCCCGTGCTGGAAACTT+TGG	0.445641	8.3:-42646996	MS.gene055879:CDS
ACGGAACTTTCGAATGTTGC+GGG	0.447410	8.3:+42647683	None:intergenic
GTGTGGATCCGCGCTGCCAC+TGG	0.452333	8.3:-42647624	MS.gene055879:CDS
GAAACTTTGGATACTATCCT+TGG	0.454621	8.3:-42646983	MS.gene055879:CDS
CAAACTCGACATATGTGAAC+TGG	0.455894	8.3:-42647044	MS.gene055879:CDS
CCGTCGTTTCGTGCTAGATT+CGG	0.456510	8.3:+42647998	None:intergenic
CTGACCTATATTCACGTAGA+AGG	0.457325	8.3:-42646228	MS.gene055879:CDS
CAACCTTTGGGAGCAACTCC+AGG	0.459999	8.3:-42647817	MS.gene055879:CDS
AACCTCTTGGAGCTGGAGAA+AGG	0.461989	8.3:+42646923	None:intergenic
GGATTTCAACCTCTTGGAGC+TGG	0.469371	8.3:+42646916	None:intergenic
AGTTTGAGCTGCTTCAATGA+TGG	0.472353	8.3:+42647061	None:intergenic
CAGAAGATTTGAGTTAAAGC+AGG	0.472414	8.3:+42646501	None:intergenic
GAGATAGAGTTGTTGAAGGT+GGG	0.478321	8.3:+42647599	None:intergenic
CCATCAATGACAATTTCACT+TGG	0.483121	8.3:-42646895	MS.gene055879:CDS
AAGATTAACAAATGTATCAA+AGG	0.488317	8.3:-42646079	MS.gene055879:CDS
ATGGCCACGGAGGTTCTTGT+TGG	0.489662	8.3:+42647867	None:intergenic
TTATGAGAACTTGAAGCATA+TGG	0.489867	8.3:+42646458	None:intergenic
CGGCTGGGTCAAATTTAAGT+TGG	0.491245	8.3:+42646043	None:intergenic
GAAAGGTGGAACAGCAAGCT+TGG	0.492232	8.3:+42646940	None:intergenic
CGATATAATTTACGAAACTC+TGG	0.497719	8.3:+42646541	None:intergenic
ATATACAACAGCAGTGGATC+CGG	0.503058	8.3:+42647903	None:intergenic
GAGAGTAGAAGAACATAATG+AGG	0.505265	8.3:-42647976	MS.gene055879:CDS
GTAACTAAACAATCAGCGTC+TGG	0.505331	8.3:+42647570	None:intergenic
TCCGGCTGCCATGTTCTCAA+TGG	0.513864	8.3:+42646285	None:intergenic
CTTCTACGTGAATATAGGTC+AGG	0.517873	8.3:+42646229	None:intergenic
ATGTATTCCGATGTCACAAT+GGG	0.521692	8.3:-42646848	MS.gene055879:CDS
GTATCCAAAGTTTCCAGCAC+GGG	0.524915	8.3:+42646992	None:intergenic
CACCTTTCTCCAGCTCCAAG+AGG	0.524936	8.3:-42646925	MS.gene055879:CDS
AACAATGCCCATTGTGACAT+CGG	0.525809	8.3:+42646841	None:intergenic
CCTTGAGATAGAGTTGTTGA+AGG	0.528422	8.3:+42647595	None:intergenic
AAGAAGAGGATGACATCGAC+AGG	0.529459	8.3:-42647938	MS.gene055879:CDS
TTCGAATGTTGCGGGATCTG+CGG	0.532075	8.3:+42647691	None:intergenic
TCACCTTAAGAAGATACGGC+TGG	0.534230	8.3:+42646027	None:intergenic
AGATTAACAAATGTATCAAA+GGG	0.543019	8.3:-42646078	MS.gene055879:CDS
ACTTACTTTGAGTTTGTTGG+TGG	0.543367	8.3:-42646872	MS.gene055879:CDS
TTTGCGTCATTCAACATCAA+AGG	0.544190	8.3:-42646690	MS.gene055879:intron
GACGGAACTTTCGAATGTTG+CGG	0.546251	8.3:+42647682	None:intergenic
GGAGGTTCTTGTTGGTAGGA+AGG	0.547604	8.3:+42647875	None:intergenic
TGAGATAGAGTTGTTGAAGG+TGG	0.549898	8.3:+42647598	None:intergenic
ATTCACGTAGAAGGATATCA+AGG	0.549942	8.3:-42646219	MS.gene055879:CDS
TCTCGGTGCAATCGAAATGA+AGG	0.552075	8.3:-42647107	MS.gene055879:CDS
AACAACCACCATTGAGAACA+TGG	0.552420	8.3:-42646293	MS.gene055879:CDS
AGATAGAGTTGTTGAAGGTG+GGG	0.554762	8.3:+42647600	None:intergenic
ACCATTGAGAACATGGCAGC+CGG	0.564288	8.3:-42646286	MS.gene055879:CDS
TCGAGAGACGAGACTCGTGA+TGG	0.564524	8.3:+42647848	None:intergenic
CCGCGTATCCACAGCTGAGA+CGG	0.564606	8.3:+42647664	None:intergenic
TTGTTGAAGGTGGGGTCCAG+TGG	0.565930	8.3:+42647608	None:intergenic
CACCTTAAGAAGATACGGCT+GGG	0.567952	8.3:+42646028	None:intergenic
AAGGTATGTCTCTGTATCCA+AGG	0.569147	8.3:+42646966	None:intergenic
GGCTGCCATGTTCTCAATGG+TGG	0.577603	8.3:+42646288	None:intergenic
TGTCATCTCGAATGTAATCT+CGG	0.579797	8.3:+42646732	None:intergenic
AGAAGATTTGAGTTAAAGCA+GGG	0.583843	8.3:+42646502	None:intergenic
AGTAGAAGAACATAATGAGG+AGG	0.589087	8.3:-42647973	MS.gene055879:CDS
TCAGAAACTCTTGTTGACTC+CGG	0.591556	8.3:+42646267	None:intergenic
CCACGGAGGTTCTTGTTGGT+AGG	0.593149	8.3:+42647871	None:intergenic
TATGTATTCCGATGTCACAA+TGG	0.598832	8.3:-42646849	MS.gene055879:CDS
CGAAAGTTCCGTCTCAGCTG+TGG	0.601146	8.3:-42647672	MS.gene055879:CDS
GACGAGACTCGTGATGGCCA+CGG	0.603936	8.3:+42647854	None:intergenic
AGACCTGGAGTTGCTCCCAA+AGG	0.608549	8.3:+42647814	None:intergenic
AATCATCGAGGTTAAAGACC+TGG	0.609410	8.3:+42647799	None:intergenic
CTACGTGAATATAGGTCAGG+TGG	0.614772	8.3:+42646232	None:intergenic
TTTAGAACAGGGGTATGAAG+TGG	0.615375	8.3:+42646568	None:intergenic
CCGTCTCAGCTGTGGATACG+CGG	0.621941	8.3:-42647664	MS.gene055879:CDS
TCTCATAATCCAAAGCAGCA+AGG	0.625493	8.3:-42646443	MS.gene055879:intron
TGGCATCTTTCATAGTATGG+TGG	0.633161	8.3:-42646819	MS.gene055879:CDS
CCTTCAACAACTCTATCTCA+AGG	0.634083	8.3:-42647595	MS.gene055879:CDS
GGAACAGCAAGCTTGGTCAA+AGG	0.634890	8.3:+42646947	None:intergenic
AGTATCCAAAGTTTCCAGCA+CGG	0.634951	8.3:+42646991	None:intergenic
ATGAGAACAAGTTTAAAGTG+TGG	0.635470	8.3:-42647641	MS.gene055879:CDS
TTTGTAATCACAGCCAGTGG+GGG	0.637232	8.3:+42647758	None:intergenic
CTCTTGGAGCTGGAGAAAGG+TGG	0.641361	8.3:+42646926	None:intergenic
ACTCTGGATAATTTAGAACA+GGG	0.645860	8.3:+42646557	None:intergenic
GAGAGTATATACAACAGCAG+TGG	0.653102	8.3:+42647897	None:intergenic
CTCTGGATAATTTAGAACAG+GGG	0.658606	8.3:+42646558	None:intergenic
AGATTACATTCGAGATGACA+CGG	0.661631	8.3:-42646729	MS.gene055879:CDS
TACGTGAATATAGGTCAGGT+GGG	0.668797	8.3:+42646233	None:intergenic
TATCCAAAGTTTCCAGCACG+GGG	0.677397	8.3:+42646993	None:intergenic
GGTGGGGTCCAGTGGCAGCG+CGG	0.687223	8.3:+42647616	None:intergenic
GATTACATTCGAGATGACAC+GGG	0.690284	8.3:-42646728	MS.gene055879:CDS
TAACTTACGTGAGGGAAACG+AGG	0.692646	8.3:+42647514	None:intergenic
CCGAATCTAGCACGAAACGA+CGG	0.701387	8.3:-42647998	MS.gene055879:CDS
AGATCGGGTCCGAATCATCG+AGG	0.739682	8.3:+42647787	None:intergenic
CCTACCAACAAGAACCTCCG+TGG	0.745052	8.3:-42647871	MS.gene055879:CDS
GAGACTCGTGATGGCCACGG+AGG	0.750604	8.3:+42647857	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAGTTTATTTAATCAATCTT+TGG	-	chr8.3:42647634-42647653	MS.gene055879:CDS	15.0%
!!	TTATATCTGTAAATTGTAAT+TGG	-	chr8.3:42647403-42647422	MS.gene055879:intron	15.0%
!!!	AGTAAATAACATATGTTTTA+GGG	+	chr8.3:42646701-42646720	None:intergenic	15.0%
!!!	GTAAGTTATAATTTTACAAA+GGG	+	chr8.3:42646563-42646582	None:intergenic	15.0%
!!!	TGTAAGTTATAATTTTACAA+AGG	+	chr8.3:42646564-42646583	None:intergenic	15.0%
!!!	TGTTTTTATTGATATTTCAA+TGG	-	chr8.3:42647910-42647929	MS.gene055879:CDS	15.0%
!!	AAGATTAACAAATGTATCAA+AGG	-	chr8.3:42647961-42647980	MS.gene055879:CDS	20.0%
!!	ACAAATATATTATTGAGTCA+TGG	-	chr8.3:42647696-42647715	MS.gene055879:CDS	20.0%
!!	AGATTAACAAATGTATCAAA+GGG	-	chr8.3:42647962-42647981	MS.gene055879:CDS	20.0%
!!	ATAGGATTAAAACAAATTTG+AGG	+	chr8.3:42646810-42646829	None:intergenic	20.0%
!!!	AAGGTGATGTTTTATTTTTA+TGG	-	chr8.3:42647369-42647388	MS.gene055879:intron	20.0%
!!!	GAGTAAATAACATATGTTTT+AGG	+	chr8.3:42646702-42646721	None:intergenic	20.0%
!!!	TTGTTAATCTTTTGATAGAA+CGG	+	chr8.3:42647952-42647971	None:intergenic	20.0%
!	ATAAGCTTGTAAGAAAGTAA+CGG	-	chr8.3:42646595-42646614	MS.gene055879:intron	25.0%
!	CTCAATAATATATTTGTGTG+CGG	+	chr8.3:42647693-42647712	None:intergenic	25.0%
!	TAAAACTCTAGCAATTTCAT+AGG	+	chr8.3:42646828-42646847	None:intergenic	25.0%
!	TATATTATTGAGTCATGGAA+TGG	-	chr8.3:42647701-42647720	MS.gene055879:CDS	25.0%
!	TTGACTACAAAAGATCTATT+GGG	+	chr8.3:42646624-42646643	None:intergenic	25.0%
!	TTTGACTACAAAAGATCTAT+TGG	+	chr8.3:42646625-42646644	None:intergenic	25.0%
!!!	CATTTGCTGAATATATTTTG+CGG	-	chr8.3:42647861-42647880	MS.gene055879:CDS	25.0%
!!!	GCTAACTCTACTTTTTTATA+GGG	+	chr8.3:42646777-42646796	None:intergenic	25.0%
	AATGAAGGTTGAACATTCTT+TGG	-	chr8.3:42646948-42646967	MS.gene055879:CDS	30.0%
	ATATCCTTCTACGTGAATAT+AGG	+	chr8.3:42647819-42647838	None:intergenic	30.0%
	CGATATAATTTACGAAACTC+TGG	+	chr8.3:42647502-42647521	None:intergenic	30.0%
	TTATGAGAACTTGAAGCATA+TGG	+	chr8.3:42647585-42647604	None:intergenic	30.0%
	TTCTCAATGAAATGAAGCTA+GGG	+	chr8.3:42646754-42646773	None:intergenic	30.0%
!	AACTCTGGATAATTTAGAAC+AGG	+	chr8.3:42647487-42647506	None:intergenic	30.0%
!	ACTCTGGATAATTTAGAACA+GGG	+	chr8.3:42647486-42647505	None:intergenic	30.0%
!	AGAAGATTTGAGTTAAAGCA+GGG	+	chr8.3:42647541-42647560	None:intergenic	30.0%
!	ATGAGAACAAGTTTAAAGTG+TGG	-	chr8.3:42646399-42646418	MS.gene055879:intron	30.0%
!!	AGTTGATAAAAAGGGAAGAA+GGG	+	chr8.3:42646499-42646518	None:intergenic	30.0%
!!	GTTGTTGCAGTTGATAAAAA+GGG	+	chr8.3:42646507-42646526	None:intergenic	30.0%
!!!	CATATGTTTTAGGGTTTGTT+TGG	+	chr8.3:42646692-42646711	None:intergenic	30.0%
!!!	GGCTAACTCTACTTTTTTAT+AGG	+	chr8.3:42646778-42646797	None:intergenic	30.0%
	AGATTACATTCGAGATGACA+CGG	-	chr8.3:42647311-42647330	MS.gene055879:intron	35.0%
	AGTAGAAGAACATAATGAGG+AGG	-	chr8.3:42646067-42646086	MS.gene055879:CDS	35.0%
	ATGTATTCCGATGTCACAAT+GGG	-	chr8.3:42647192-42647211	MS.gene055879:intron	35.0%
	ATTCACGTAGAAGGATATCA+AGG	-	chr8.3:42647821-42647840	MS.gene055879:CDS	35.0%
	CATTGTAGTAACTTACGTGA+GGG	+	chr8.3:42646537-42646556	None:intergenic	35.0%
	CCAAGTGAAATTGTCATTGA+TGG	+	chr8.3:42647148-42647167	None:intergenic	35.0%
	CCATCAATGACAATTTCACT+TGG	-	chr8.3:42647145-42647164	MS.gene055879:intron	35.0%
	GAAACTTTGGATACTATCCT+TGG	-	chr8.3:42647057-42647076	MS.gene055879:CDS	35.0%
	GAGAGTAGAAGAACATAATG+AGG	-	chr8.3:42646064-42646083	MS.gene055879:CDS	35.0%
	GTTCTCAATGAAATGAAGCT+AGG	+	chr8.3:42646755-42646774	None:intergenic	35.0%
	TACACGAAAACAACAAGTGA+TGG	+	chr8.3:42647442-42647461	None:intergenic	35.0%
	TATGTATTCCGATGTCACAA+TGG	-	chr8.3:42647191-42647210	MS.gene055879:intron	35.0%
	TGTCATCTCGAATGTAATCT+CGG	+	chr8.3:42647311-42647330	None:intergenic	35.0%
	TGTTGGCATCTTTCATAGTA+TGG	-	chr8.3:42647218-42647237	MS.gene055879:intron	35.0%
	TTTGCGTCATTCAACATCAA+AGG	-	chr8.3:42647350-42647369	MS.gene055879:intron	35.0%
!	ACAAATTTGAGGCATAAGTC+AGG	+	chr8.3:42646799-42646818	None:intergenic	35.0%
!	ACTGCAGTGTTTTCAAAAGA+CGG	+	chr8.3:42646911-42646930	None:intergenic	35.0%
!	CAGAAGATTTGAGTTAAAGC+AGG	+	chr8.3:42647542-42647561	None:intergenic	35.0%
!	CTCTGGATAATTTAGAACAG+GGG	+	chr8.3:42647485-42647504	None:intergenic	35.0%
!	GCTGAATATATTTTGCGGAA+CGG	-	chr8.3:42647866-42647885	MS.gene055879:CDS	35.0%
!	TGGACTTACTTTGAGTTTGT+TGG	-	chr8.3:42647165-42647184	MS.gene055879:intron	35.0%
!	TTTTTGTAATCACAGCCAGT+GGG	+	chr8.3:42646287-42646306	None:intergenic	35.0%
!!	ACTTACTTTGAGTTTGTTGG+TGG	-	chr8.3:42647168-42647187	MS.gene055879:intron	35.0%
!!	ATTGATGGATTTCAACCTCT+TGG	+	chr8.3:42647133-42647152	None:intergenic	35.0%
!!	CAGTTGATAAAAAGGGAAGA+AGG	+	chr8.3:42646500-42646519	None:intergenic	35.0%
!!	GGTTGTTGCAGTTGATAAAA+AGG	+	chr8.3:42646508-42646527	None:intergenic	35.0%
	AACAACCACCATTGAGAACA+TGG	-	chr8.3:42647747-42647766	MS.gene055879:CDS	40.0%
	AACAATGCCCATTGTGACAT+CGG	+	chr8.3:42647202-42647221	None:intergenic	40.0%
	AAGGTATGTCTCTGTATCCA+AGG	+	chr8.3:42647077-42647096	None:intergenic	40.0%
	AATCATCGAGGTTAAAGACC+TGG	+	chr8.3:42646244-42646263	None:intergenic	40.0%
	AGATAGAGTTGTTGAAGGTG+GGG	+	chr8.3:42646443-42646462	None:intergenic	40.0%
	AGTATCCAAAGTTTCCAGCA+CGG	+	chr8.3:42647052-42647071	None:intergenic	40.0%
	AGTTTGAGCTGCTTCAATGA+TGG	+	chr8.3:42646982-42647001	None:intergenic	40.0%
	ATATACAACAGCAGTGGATC+CGG	+	chr8.3:42646140-42646159	None:intergenic	40.0%
	CAAACTCGACATATGTGAAC+TGG	-	chr8.3:42646996-42647015	MS.gene055879:CDS	40.0%
	CCATTGTAGTAACTTACGTG+AGG	+	chr8.3:42646538-42646557	None:intergenic	40.0%
	CCTCACGTAAGTTACTACAA+TGG	-	chr8.3:42646535-42646554	MS.gene055879:CDS	40.0%
	CCTTCAACAACTCTATCTCA+AGG	-	chr8.3:42646445-42646464	MS.gene055879:CDS	40.0%
	CCTTGAGATAGAGTTGTTGA+AGG	+	chr8.3:42646448-42646467	None:intergenic	40.0%
	CTGACCTATATTCACGTAGA+AGG	-	chr8.3:42647812-42647831	MS.gene055879:CDS	40.0%
	CTTCTACGTGAATATAGGTC+AGG	+	chr8.3:42647814-42647833	None:intergenic	40.0%
	GAGATAGAGTTGTTGAAGGT+GGG	+	chr8.3:42646444-42646463	None:intergenic	40.0%
	GATTACATTCGAGATGACAC+GGG	-	chr8.3:42647312-42647331	MS.gene055879:intron	40.0%
	GGAAGAAGAAGAAGAAGAAG+AGG	-	chr8.3:42646088-42646107	MS.gene055879:CDS	40.0%
	GGTCTTTAACCTCGATGATT+CGG	-	chr8.3:42646244-42646263	MS.gene055879:CDS	40.0%
	GTAACTAAACAATCAGCGTC+TGG	+	chr8.3:42646473-42646492	None:intergenic	40.0%
	TACGTGAATATAGGTCAGGT+GGG	+	chr8.3:42647810-42647829	None:intergenic	40.0%
	TCTCATAATCCAAAGCAGCA+AGG	-	chr8.3:42647597-42647616	MS.gene055879:CDS	40.0%
	TGAAAACACTGCAGTCTTCT+CGG	-	chr8.3:42646916-42646935	MS.gene055879:CDS	40.0%
	TGAGATAGAGTTGTTGAAGG+TGG	+	chr8.3:42646445-42646464	None:intergenic	40.0%
	TGGCATCTTTCATAGTATGG+TGG	-	chr8.3:42647221-42647240	MS.gene055879:intron	40.0%
!	CTTTTTGTAATCACAGCCAG+TGG	+	chr8.3:42646288-42646307	None:intergenic	40.0%
!	GAGAGTATATACAACAGCAG+TGG	+	chr8.3:42646146-42646165	None:intergenic	40.0%
!	TGTTTTCAAAAGACGGACAC+AGG	+	chr8.3:42646904-42646923	None:intergenic	40.0%
!	TTGTTTTCGTGTACAACCAG+TGG	-	chr8.3:42647449-42647468	MS.gene055879:intron	40.0%
!	TTTAGAACAGGGGTATGAAG+TGG	+	chr8.3:42647475-42647494	None:intergenic	40.0%
!	TTTTGTAATCACAGCCAGTG+GGG	+	chr8.3:42646286-42646305	None:intergenic	40.0%
!!	TCAGAAACTCTTGTTGACTC+CGG	+	chr8.3:42647776-42647795	None:intergenic	40.0%
	AAGAAGAGGATGACATCGAC+AGG	-	chr8.3:42646102-42646121	MS.gene055879:CDS	45.0%
	ACGGAACTTTCGAATGTTGC+GGG	+	chr8.3:42646360-42646379	None:intergenic	45.0%
	CGGCTGGGTCAAATTTAAGT+TGG	+	chr8.3:42648000-42648019	None:intergenic	45.0%
	CTACGTGAATATAGGTCAGG+TGG	+	chr8.3:42647811-42647830	None:intergenic	45.0%
	CTCGGATGCTGTTGAGAATA+GGG	+	chr8.3:42647293-42647312	None:intergenic	45.0%
	GACGGAACTTTCGAATGTTG+CGG	+	chr8.3:42646361-42646380	None:intergenic	45.0%
	GAGCACACTGTCAACGTAAT+AGG	+	chr8.3:42646324-42646343	None:intergenic	45.0%
	GTATCCAAAGTTTCCAGCAC+GGG	+	chr8.3:42647051-42647070	None:intergenic	45.0%
	TAACTTACGTGAGGGAAACG+AGG	+	chr8.3:42646529-42646548	None:intergenic	45.0%
	TATCCAAAGTTTCCAGCACG+GGG	+	chr8.3:42647050-42647069	None:intergenic	45.0%
	TCGAAAATGGCGCAACCTTT+GGG	-	chr8.3:42646211-42646230	MS.gene055879:CDS	45.0%
	TCGAAAGTTGCCTTTCTCTC+TGG	-	chr8.3:42647021-42647040	MS.gene055879:CDS	45.0%
	TCTCGGATGCTGTTGAGAAT+AGG	+	chr8.3:42647294-42647313	None:intergenic	45.0%
	TTTGTAATCACAGCCAGTGG+GGG	+	chr8.3:42646285-42646304	None:intergenic	45.0%
!	GATGTCACAATGGGCATTGT+TGG	-	chr8.3:42647201-42647220	MS.gene055879:intron	45.0%
!	GTCAACAAACCTTGCTGCTT+TGG	+	chr8.3:42647609-42647628	None:intergenic	45.0%
!	TCTCGGTGCAATCGAAATGA+AGG	-	chr8.3:42646933-42646952	MS.gene055879:CDS	45.0%
!!	TTTGCGGAACGGACTTGTTT+TGG	-	chr8.3:42647877-42647896	MS.gene055879:CDS	45.0%
	AACCTCTTGGAGCTGGAGAA+AGG	+	chr8.3:42647120-42647139	None:intergenic	50.0%
	ACCATTGAGAACATGGCAGC+CGG	-	chr8.3:42647754-42647773	MS.gene055879:CDS	50.0%
	CCGAATCTAGCACGAAACGA+CGG	-	chr8.3:42646042-42646061	MS.gene055879:CDS	50.0%
	CCGTCGTTTCGTGCTAGATT+CGG	+	chr8.3:42646045-42646064	None:intergenic	50.0%
	CGACAGGATAAGCACTTTGC+CGG	-	chr8.3:42646118-42646137	MS.gene055879:CDS	50.0%
	CGAGTCTCGTCTCTCGAAAA+TGG	-	chr8.3:42646198-42646217	MS.gene055879:CDS	50.0%
	CTCGAAAATGGCGCAACCTT+TGG	-	chr8.3:42646210-42646229	MS.gene055879:CDS	50.0%
	GAAAGGTGGAACAGCAAGCT+TGG	+	chr8.3:42647103-42647122	None:intergenic	50.0%
	GGAACAGCAAGCTTGGTCAA+AGG	+	chr8.3:42647096-42647115	None:intergenic	50.0%
	GGAATGGTGTCCCTTATTGC+TGG	-	chr8.3:42647717-42647736	MS.gene055879:CDS	50.0%
	GGATTTCAACCTCTTGGAGC+TGG	+	chr8.3:42647127-42647146	None:intergenic	50.0%
	GTTCCTCCTGCCAGCAATAA+GGG	+	chr8.3:42647730-42647749	None:intergenic	50.0%
	TGTTCCTCCTGCCAGCAATA+AGG	+	chr8.3:42647731-42647750	None:intergenic	50.0%
	TTCGAATGTTGCGGGATCTG+CGG	+	chr8.3:42646352-42646371	None:intergenic	50.0%
!	GGAGGTTCTTGTTGGTAGGA+AGG	+	chr8.3:42646168-42646187	None:intergenic	50.0%
	AGACCTGGAGTTGCTCCCAA+AGG	+	chr8.3:42646229-42646248	None:intergenic	55.0%
	AGATCGGGTCCGAATCATCG+AGG	+	chr8.3:42646256-42646275	None:intergenic	55.0%
	ATGGCCACGGAGGTTCTTGT+TGG	+	chr8.3:42646176-42646195	None:intergenic	55.0%
	CACCTTTCTCCAGCTCCAAG+AGG	-	chr8.3:42647115-42647134	MS.gene055879:intron	55.0%
	CCACGGAGGTTCTTGTTGGT+AGG	+	chr8.3:42646172-42646191	None:intergenic	55.0%
	CCTACCAACAAGAACCTCCG+TGG	-	chr8.3:42646169-42646188	MS.gene055879:CDS	55.0%
	CGAAAGTTCCGTCTCAGCTG+TGG	-	chr8.3:42646368-42646387	MS.gene055879:intron	55.0%
	CTCTTGGAGCTGGAGAAAGG+TGG	+	chr8.3:42647117-42647136	None:intergenic	55.0%
	GGCTGCCATGTTCTCAATGG+TGG	+	chr8.3:42647755-42647774	None:intergenic	55.0%
	TCCGGCTGCCATGTTCTCAA+TGG	+	chr8.3:42647758-42647777	None:intergenic	55.0%
	TCGAGAGACGAGACTCGTGA+TGG	+	chr8.3:42646195-42646214	None:intergenic	55.0%
	TGGTGTCCCTTATTGCTGGC+AGG	-	chr8.3:42647721-42647740	MS.gene055879:CDS	55.0%
	TGTCCCTTATTGCTGGCAGG+AGG	-	chr8.3:42647724-42647743	MS.gene055879:CDS	55.0%
	TTGTTGAAGGTGGGGTCCAG+TGG	+	chr8.3:42646435-42646454	None:intergenic	55.0%
!	CAACCTTTGGGAGCAACTCC+AGG	-	chr8.3:42646223-42646242	MS.gene055879:CDS	55.0%
	CCGCGTATCCACAGCTGAGA+CGG	+	chr8.3:42646379-42646398	None:intergenic	60.0%
	CCGTCTCAGCTGTGGATACG+CGG	-	chr8.3:42646376-42646395	MS.gene055879:intron	60.0%
	CTGCCCCGTGCTGGAAACTT+TGG	-	chr8.3:42647044-42647063	MS.gene055879:CDS	60.0%
	GACGAGACTCGTGATGGCCA+CGG	+	chr8.3:42646189-42646208	None:intergenic	60.0%
!	CAGGGGTATGAAGTGGCCAC+TGG	+	chr8.3:42647468-42647487	None:intergenic	60.0%
!!	CAGTGGGGGTGTCGAAGATC+GGG	+	chr8.3:42646271-42646290	None:intergenic	60.0%
!!	CCAGTGGGGGTGTCGAAGAT+CGG	+	chr8.3:42646272-42646291	None:intergenic	60.0%
	CACGGGGCAGCCAGAGAGAA+AGG	+	chr8.3:42647034-42647053	None:intergenic	65.0%
	CCGATCTTCGACACCCCCAC+TGG	-	chr8.3:42646269-42646288	MS.gene055879:CDS	65.0%
	GAGACTCGTGATGGCCACGG+AGG	+	chr8.3:42646186-42646205	None:intergenic	65.0%
	GTGTGGATCCGCGCTGCCAC+TGG	-	chr8.3:42646416-42646435	MS.gene055879:intron	70.0%
	TCTCTCTGGCTGCCCCGTGC+TGG	-	chr8.3:42647035-42647054	MS.gene055879:CDS	70.0%
	GGTGGGGTCCAGTGGCAGCG+CGG	+	chr8.3:42646427-42646446	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.3	gene	42646032	42648030	42646032	ID=MS.gene055879
chr8.3	mRNA	42646032	42648030	42646032	ID=MS.gene055879.t1;Parent=MS.gene055879
chr8.3	exon	42647522	42648030	42647522	ID=MS.gene055879.t1.exon1;Parent=MS.gene055879.t1
chr8.3	CDS	42647522	42648030	42647522	ID=cds.MS.gene055879.t1;Parent=MS.gene055879.t1
chr8.3	exon	42646691	42647132	42646691	ID=MS.gene055879.t1.exon2;Parent=MS.gene055879.t1
chr8.3	CDS	42646691	42647132	42646691	ID=cds.MS.gene055879.t1;Parent=MS.gene055879.t1
chr8.3	exon	42646444	42646593	42646444	ID=MS.gene055879.t1.exon3;Parent=MS.gene055879.t1
chr8.3	CDS	42646444	42646593	42646444	ID=cds.MS.gene055879.t1;Parent=MS.gene055879.t1
chr8.3	exon	42646032	42646319	42646032	ID=MS.gene055879.t1.exon4;Parent=MS.gene055879.t1
chr8.3	CDS	42646032	42646319	42646032	ID=cds.MS.gene055879.t1;Parent=MS.gene055879.t1

Gene Sequence

>MS.gene055879

ATGACTATGGCCGAATCTAGCACGAAACGACGGAGAGTAGAAGAACATAATGAGGAGGAAGAAGAAGAAGAAGAAGAGGATGACATCGACAGGATAAGCACTTTGCCGGATCCACTGCTGTTGTATATACTCTCCTTCCTACCAACAAGAACCTCCGTGGCCATCACGAGTCTCGTCTCTCGAAAATGGCGCAACCTTTGGGAGCAACTCCAGGTCTTTAACCTCGATGATTCGGACCCGATCTTCGACACCCCCACTGGCTGTGATTACAAAAAGTTCAAAAAGTTTGCCTATTACGTTGACAGTGTGCTCGCTCTCCGCAGATCCCGCAACATTCGAAAGTTCCGTCTCAGCTGTGGATACGCGGATGAGAACAAGTTTAAAGTGTGGATCCGCGCTGCCACTGGACCCCACCTTCAACAACTCTATCTCAAGGTTCCAGACGCTGATTGTTTAGTTACACTCCCTTCTTCCCTTTTTATCAACTGCAACAACCTCGTTTCCCTCACGTAAGTTACTACAATGGCTCCCTTTGTAAAATTATAACTTACAAGCTATAAACTATAAGCTTGTAAGAAAGTAACGGTAACCCAATAGATCTTTTGTAGTCAAATGAGCTTACAAGACATAAGTTATAAGCTATAAAATTATGTCATACCAAACAAACCCTAAAACATATGTTATTTACTCTTTTTTTTTTTTTTTTTCGATTTTGTTTTCCCTAGCTTCATTTCATTGAGAACCCTATAAAAAAGTAGAGTTAGCCTGACTTATGCCTCAAATTTGTTTTAATCCTATGAAATTGCTAGAGTTTTACAGATTATGTCTAAATTTCTAACAAGTAAACAAATATACATTGTTATCTATAACCTGTGTCCGTCTTTTGAAAACACTGCAGTCTTCTCGGTGCAATCGAAATGAAGGTTGAACATTCTTTGGTTCATTTTCCATCATTGAAGCAGCTCAAACTCGACATATGTGAACTGGATTCGAAAGTTGCCTTTCTCTCTGGCTGCCCCGTGCTGGAAACTTTGGATACTATCCTTGGATACAGAGACATACCTTTGACCAAGCTTGCTGTTCCACCTTTCTCCAGCTCCAAGAGGTTGAAATCCATCAATGACAATTTCACTTGGACTTACTTTGAGTTTGTTGGTGGTATGTATTCCGATGTCACAATGGGCATTGTTGGCATCTTTCATAGTATGGTGGAAGCATTTCTTGATGTCTTTTTCTCGAGTGAGAGTGAATTTGTCGACCCTATTCTCAACAGCATCCGAGATTACATTCGAGATGACACGGGTGAAGTTCGATTACTTTTGCGTCATTCAACATCAAAGGTGATGTTTTATTTTTATGGTTTATATGTTTTTATATCTGTAAATTGTAATTGGTACTAATATTGCACCATCACTTGTTGTTTTCGTGTACAACCAGTGGCCACTTCATACCCCTGTTCTAAATTATCCAGAGTTTCGTAAATTATATCGTCTAAAGTTCATTCTTCCCTGCTTTAACTCAAATCTTCTGCTCAACGTGCTTGCGAAATGCCATATGCTTCAAGTTCTCATAATCCAAAGCAGCAAGGTTTGTTGACTTCTCAAGTTTATTTAATCAATCTTTGGTCTGTCTATATATATGCACGCATATGTATCTATCCGCACACAAATATATTATTGAGTCATGGAATGGTGTCCCTTATTGCTGGCAGGAGGAACAACCACCATTGAGAACATGGCAGCCGGAGTCAACAAGAGTTTCTGAATGTCTCAAGTCCCACCTGACCTATATTCACGTAGAAGGATATCAAGGACTTGAAGATGAGCTAACATTTGCTGAATATATTTTGCGGAACGGACTTGTTTTGGAGACAATGCTTGTTTTTATTGATATTTCAATGGACATAACGAACAAGTACCGTTCTATCAAAAGATTAACAAATGTATCAAAGGGCTCTGTCAAATGCCAACTTAAATTTGACCCAGCCGTATCTTCTTAA

Protein sequence

>MS.gene055879.t1

MTMAESSTKRRRVEEHNEEEEEEEEEDDIDRISTLPDPLLLYILSFLPTRTSVAITSLVSRKWRNLWEQLQVFNLDDSDPIFDTPTGCDYKKFKKFAYYVDSVLALRRSRNIRKFRLSCGYADENKFKVWIRAATGPHLQQLYLKVPDADCLVTLPSSLFINCNNLVSLTLLGAIEMKVEHSLVHFPSLKQLKLDICELDSKVAFLSGCPVLETLDTILGYRDIPLTKLAVPPFSSSKRLKSINDNFTWTYFEFVGGMYSDVTMGIVGIFHSMVEAFLDVFFSSESEFVDPILNSIRDYIRDDTGEVRLLLRHSTSKWPLHTPVLNYPEFRKLYRLKFILPCFNSNLLLNVLAKCHMLQVLIIQSSKEEQPPLRTWQPESTRVSECLKSHLTYIHVEGYQGLEDELTFAEYILRNGLVLETMLVFIDISMDITNKYRSIKRLTNVSKGSVKCQLKFDPAVSS