Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64286.t1 | XP_013467168.1 | 98.4 | 742 | 12 | 0 | 1 | 742 | 1 | 742 | 0.00E+00 | 1419.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64286.t1 | Q55680 | 42.6 | 547 | 267 | 9 | 133 | 673 | 53 | 558 | 1.7e-121 | 438.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64286.t1 | A0A072VGN0 | 98.4 | 742 | 12 | 0 | 1 | 742 | 1 | 742 | 0.0e+00 | 1419.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene64286 | 0.894664 | 1.99E-75 | -1.69E-46 |
| MS.gene049173 | MS.gene64286 | 0.841106 | 5.81E-58 | -1.69E-46 |
| MS.gene049217 | MS.gene64286 | 0.823144 | 1.62E-53 | -1.69E-46 |
| MS.gene049222 | MS.gene64286 | 0.896483 | 3.53E-76 | -1.69E-46 |
| MS.gene049232 | MS.gene64286 | 0.899643 | 1.62E-77 | -1.69E-46 |
| MS.gene049285 | MS.gene64286 | 0.890945 | 6.22E-74 | -1.69E-46 |
| MS.gene049320 | MS.gene64286 | 0.87262 | 2.76E-67 | -1.69E-46 |
| MS.gene049396 | MS.gene64286 | 0.80408 | 2.56E-49 | -1.69E-46 |
| MS.gene04939 | MS.gene64286 | 0.836666 | 8.19E-57 | -1.69E-46 |
| MS.gene049600 | MS.gene64286 | 0.815177 | 1.06E-51 | -1.69E-46 |
| MS.gene049609 | MS.gene64286 | 0.844867 | 5.79E-59 | -1.69E-46 |
| MS.gene049633 | MS.gene64286 | 0.888606 | 5.09E-73 | -1.69E-46 |
| MS.gene049656 | MS.gene64286 | 0.812551 | 4.01E-51 | -1.69E-46 |
| MS.gene049657 | MS.gene64286 | 0.826064 | 3.33E-54 | -1.69E-46 |
| MS.gene049805 | MS.gene64286 | 0.831308 | 1.80E-55 | -1.69E-46 |
| MS.gene049865 | MS.gene64286 | 0.822702 | 2.06E-53 | -1.69E-46 |
| MS.gene05010 | MS.gene64286 | 0.870059 | 1.94E-66 | -1.69E-46 |
| MS.gene050163 | MS.gene64286 | 0.859399 | 4.25E-63 | -1.69E-46 |
| MS.gene050165 | MS.gene64286 | 0.861479 | 9.97E-64 | -1.69E-46 |
| MS.gene050170 | MS.gene64286 | 0.903094 | 4.95E-79 | -1.69E-46 |
| MS.gene050216 | MS.gene64286 | 0.826936 | 2.06E-54 | -1.69E-46 |
| MS.gene050323 | MS.gene64286 | 0.917002 | 9.02E-86 | -1.69E-46 |
| MS.gene050333 | MS.gene64286 | 0.848407 | 6.25E-60 | -1.69E-46 |
| MS.gene050338 | MS.gene64286 | -0.813286 | 2.76E-51 | -1.69E-46 |
| MS.gene050444 | MS.gene64286 | 0.817079 | 3.97E-52 | -1.69E-46 |
| MS.gene050496 | MS.gene64286 | 0.903109 | 4.87E-79 | -1.69E-46 |
| MS.gene050502 | MS.gene64286 | 0.829771 | 4.27E-55 | -1.69E-46 |
| MS.gene050504 | MS.gene64286 | 0.901768 | 1.92E-78 | -1.69E-46 |
| MS.gene050518 | MS.gene64286 | 0.881042 | 3.33E-70 | -1.69E-46 |
| MS.gene050577 | MS.gene64286 | 0.907178 | 6.71E-81 | -1.69E-46 |
| MS.gene050593 | MS.gene64286 | 0.80707 | 6.05E-50 | -1.69E-46 |
| MS.gene050612 | MS.gene64286 | 0.896172 | 4.76E-76 | -1.69E-46 |
| MS.gene050662 | MS.gene64286 | 0.81498 | 1.17E-51 | -1.69E-46 |
| MS.gene050675 | MS.gene64286 | 0.874294 | 7.56E-68 | -1.69E-46 |
| MS.gene050697 | MS.gene64286 | 0.837602 | 4.72E-57 | -1.69E-46 |
| MS.gene050699 | MS.gene64286 | 0.874316 | 7.43E-68 | -1.69E-46 |
| MS.gene050747 | MS.gene64286 | 0.869977 | 2.07E-66 | -1.69E-46 |
| MS.gene050772 | MS.gene64286 | 0.865722 | 4.80E-65 | -1.69E-46 |
| MS.gene05080 | MS.gene64286 | 0.87729 | 7.08E-69 | -1.69E-46 |
| MS.gene05081 | MS.gene64286 | 0.800712 | 1.27E-48 | -1.69E-46 |
| MS.gene050868 | MS.gene64286 | 0.89046 | 9.66E-74 | -1.69E-46 |
| MS.gene050871 | MS.gene64286 | 0.891117 | 5.32E-74 | -1.69E-46 |
| MS.gene050876 | MS.gene64286 | 0.871266 | 7.79E-67 | -1.69E-46 |
| MS.gene050904 | MS.gene64286 | 0.894415 | 2.52E-75 | -1.69E-46 |
| MS.gene050950 | MS.gene64286 | 0.861802 | 7.94E-64 | -1.69E-46 |
| MS.gene050986 | MS.gene64286 | 0.888753 | 4.46E-73 | -1.69E-46 |
| MS.gene05100 | MS.gene64286 | 0.826894 | 2.11E-54 | -1.69E-46 |
| MS.gene051268 | MS.gene64286 | 0.847952 | 8.35E-60 | -1.69E-46 |
| MS.gene051317 | MS.gene64286 | 0.869067 | 4.09E-66 | -1.69E-46 |
| MS.gene051509 | MS.gene64286 | 0.841918 | 3.55E-58 | -1.69E-46 |
| MS.gene051551 | MS.gene64286 | 0.848105 | 7.58E-60 | -1.69E-46 |
| MS.gene051651 | MS.gene64286 | -0.830978 | 2.17E-55 | -1.69E-46 |
| MS.gene051734 | MS.gene64286 | 0.809476 | 1.86E-50 | -1.69E-46 |
| MS.gene051810 | MS.gene64286 | 0.809728 | 1.64E-50 | -1.69E-46 |
| MS.gene051838 | MS.gene64286 | 0.840188 | 1.01E-57 | -1.69E-46 |
| MS.gene051874 | MS.gene64286 | 0.811492 | 6.81E-51 | -1.69E-46 |
| MS.gene051941 | MS.gene64286 | 0.835193 | 1.94E-56 | -1.69E-46 |
| MS.gene052066 | MS.gene64286 | 0.818747 | 1.67E-52 | -1.69E-46 |
| MS.gene052164 | MS.gene64286 | 0.901587 | 2.30E-78 | -1.69E-46 |
| MS.gene052482 | MS.gene64286 | 0.893935 | 3.95E-75 | -1.69E-46 |
| MS.gene052486 | MS.gene64286 | 0.902029 | 1.47E-78 | -1.69E-46 |
| MS.gene052494 | MS.gene64286 | -0.821613 | 3.68E-53 | -1.69E-46 |
| MS.gene052503 | MS.gene64286 | 0.879365 | 1.32E-69 | -1.69E-46 |
| MS.gene052504 | MS.gene64286 | 0.814479 | 1.51E-51 | -1.69E-46 |
| MS.gene052506 | MS.gene64286 | 0.846377 | 2.26E-59 | -1.69E-46 |
| MS.gene052615 | MS.gene64286 | 0.844661 | 6.58E-59 | -1.69E-46 |
| MS.gene052822 | MS.gene64286 | 0.853034 | 3.12E-61 | -1.69E-46 |
| MS.gene052823 | MS.gene64286 | 0.87831 | 3.11E-69 | -1.69E-46 |
| MS.gene052825 | MS.gene64286 | 0.86944 | 3.09E-66 | -1.69E-46 |
| MS.gene052872 | MS.gene64286 | 0.802663 | 5.04E-49 | -1.69E-46 |
| MS.gene052916 | MS.gene64286 | 0.82207 | 2.88E-53 | -1.69E-46 |
| MS.gene052966 | MS.gene64286 | 0.886687 | 2.75E-72 | -1.69E-46 |
| MS.gene053117 | MS.gene64286 | 0.802336 | 5.89E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene64286 | 0.878862 | 1.99E-69 | -1.69E-46 |
| MS.gene053207 | MS.gene64286 | 0.80945 | 1.88E-50 | -1.69E-46 |
| MS.gene053213 | MS.gene64286 | 0.859018 | 5.53E-63 | -1.69E-46 |
| MS.gene053286 | MS.gene64286 | 0.862931 | 3.57E-64 | -1.69E-46 |
| MS.gene053436 | MS.gene64286 | 0.857257 | 1.85E-62 | -1.69E-46 |
| MS.gene053479 | MS.gene64286 | 0.831412 | 1.69E-55 | -1.69E-46 |
| MS.gene053480 | MS.gene64286 | 0.860004 | 2.79E-63 | -1.69E-46 |
| MS.gene053574 | MS.gene64286 | 0.875122 | 3.95E-68 | -1.69E-46 |
| MS.gene053626 | MS.gene64286 | 0.863936 | 1.74E-64 | -1.69E-46 |
| MS.gene053632 | MS.gene64286 | 0.843892 | 1.06E-58 | -1.69E-46 |
| MS.gene053633 | MS.gene64286 | 0.873683 | 1.22E-67 | -1.69E-46 |
| MS.gene053824 | MS.gene64286 | 0.876819 | 1.03E-68 | -1.69E-46 |
| MS.gene053916 | MS.gene64286 | 0.830988 | 2.15E-55 | -1.69E-46 |
| MS.gene054003 | MS.gene64286 | 0.815428 | 9.29E-52 | -1.69E-46 |
| MS.gene054408 | MS.gene64286 | 0.849997 | 2.26E-60 | -1.69E-46 |
| MS.gene054595 | MS.gene64286 | 0.884132 | 2.49E-71 | -1.69E-46 |
| MS.gene054600 | MS.gene64286 | 0.863495 | 2.39E-64 | -1.69E-46 |
| MS.gene054642 | MS.gene64286 | 0.858564 | 7.55E-63 | -1.69E-46 |
| MS.gene054706 | MS.gene64286 | -0.817672 | 2.92E-52 | -1.69E-46 |
| MS.gene05470 | MS.gene64286 | 0.887202 | 1.76E-72 | -1.69E-46 |
| MS.gene054927 | MS.gene64286 | 0.802721 | 4.90E-49 | -1.69E-46 |
| MS.gene054954 | MS.gene64286 | 0.907225 | 6.38E-81 | -1.69E-46 |
| MS.gene055224 | MS.gene64286 | 0.832889 | 7.31E-56 | -1.69E-46 |
| MS.gene055251 | MS.gene64286 | -0.81898 | 1.48E-52 | -1.69E-46 |
| MS.gene055362 | MS.gene64286 | 0.877285 | 7.10E-69 | -1.69E-46 |
| MS.gene055502 | MS.gene64286 | 0.895977 | 5.74E-76 | -1.69E-46 |
| MS.gene055577 | MS.gene64286 | 0.881147 | 3.06E-70 | -1.69E-46 |
| MS.gene055722 | MS.gene64286 | 0.832041 | 1.18E-55 | -1.69E-46 |
| MS.gene055748 | MS.gene64286 | 0.894401 | 2.55E-75 | -1.69E-46 |
| MS.gene055750 | MS.gene64286 | 0.913493 | 5.77E-84 | -1.69E-46 |
| MS.gene055751 | MS.gene64286 | 0.903536 | 3.14E-79 | -1.69E-46 |
| MS.gene055776 | MS.gene64286 | 0.877979 | 4.07E-69 | -1.69E-46 |
| MS.gene055849 | MS.gene64286 | 0.85396 | 1.69E-61 | -1.69E-46 |
| MS.gene05589 | MS.gene64286 | 0.924517 | 6.34E-90 | -1.69E-46 |
| MS.gene055941 | MS.gene64286 | 0.866319 | 3.11E-65 | -1.69E-46 |
| MS.gene056040 | MS.gene64286 | 0.835263 | 1.86E-56 | -1.69E-46 |
| MS.gene056046 | MS.gene64286 | 0.856549 | 2.99E-62 | -1.69E-46 |
| MS.gene056166 | MS.gene64286 | 0.868699 | 5.38E-66 | -1.69E-46 |
| MS.gene056266 | MS.gene64286 | 0.829278 | 5.63E-55 | -1.69E-46 |
| MS.gene056283 | MS.gene64286 | 0.82583 | 3.79E-54 | -1.69E-46 |
| MS.gene056374 | MS.gene64286 | 0.815438 | 9.24E-52 | -1.69E-46 |
| MS.gene056387 | MS.gene64286 | 0.842325 | 2.77E-58 | -1.69E-46 |
| MS.gene056446 | MS.gene64286 | 0.835746 | 1.40E-56 | -1.69E-46 |
| MS.gene056450 | MS.gene64286 | 0.822669 | 2.09E-53 | -1.69E-46 |
| MS.gene056504 | MS.gene64286 | 0.933894 | 9.35E-96 | -1.69E-46 |
| MS.gene056510 | MS.gene64286 | 0.918438 | 1.56E-86 | -1.69E-46 |
| MS.gene056549 | MS.gene64286 | 0.821685 | 3.54E-53 | -1.69E-46 |
| MS.gene056610 | MS.gene64286 | 0.806063 | 9.87E-50 | -1.69E-46 |
| MS.gene056657 | MS.gene64286 | 0.886122 | 4.50E-72 | -1.69E-46 |
| MS.gene056692 | MS.gene64286 | 0.850045 | 2.19E-60 | -1.69E-46 |
| MS.gene056878 | MS.gene64286 | 0.818845 | 1.58E-52 | -1.69E-46 |
| MS.gene057076 | MS.gene64286 | 0.856013 | 4.29E-62 | -1.69E-46 |
| MS.gene057086 | MS.gene64286 | 0.858406 | 8.42E-63 | -1.69E-46 |
| MS.gene057416 | MS.gene64286 | 0.82313 | 1.63E-53 | -1.69E-46 |
| MS.gene05753 | MS.gene64286 | 0.823453 | 1.37E-53 | -1.69E-46 |
| MS.gene057658 | MS.gene64286 | 0.815702 | 8.07E-52 | -1.69E-46 |
| MS.gene057687 | MS.gene64286 | 0.846761 | 1.77E-59 | -1.69E-46 |
| MS.gene057734 | MS.gene64286 | 0.82713 | 1.85E-54 | -1.69E-46 |
| MS.gene057831 | MS.gene64286 | 0.880709 | 4.39E-70 | -1.69E-46 |
| MS.gene057856 | MS.gene64286 | 0.800527 | 1.38E-48 | -1.69E-46 |
| MS.gene057857 | MS.gene64286 | 0.826958 | 2.04E-54 | -1.69E-46 |
| MS.gene057872 | MS.gene64286 | 0.854764 | 9.90E-62 | -1.69E-46 |
| MS.gene05787 | MS.gene64286 | 0.87746 | 6.17E-69 | -1.69E-46 |
| MS.gene058019 | MS.gene64286 | 0.809286 | 2.04E-50 | -1.69E-46 |
| MS.gene058157 | MS.gene64286 | 0.810107 | 1.36E-50 | -1.69E-46 |
| MS.gene058171 | MS.gene64286 | -0.80713 | 5.87E-50 | -1.69E-46 |
| MS.gene058175 | MS.gene64286 | -0.807305 | 5.39E-50 | -1.69E-46 |
| MS.gene058334 | MS.gene64286 | -0.86663 | 2.48E-65 | -1.69E-46 |
| MS.gene058338 | MS.gene64286 | 0.850072 | 2.15E-60 | -1.69E-46 |
| MS.gene05837 | MS.gene64286 | 0.867557 | 1.25E-65 | -1.69E-46 |
| MS.gene058419 | MS.gene64286 | 0.886774 | 2.55E-72 | -1.69E-46 |
| MS.gene058544 | MS.gene64286 | 0.85558 | 5.73E-62 | -1.69E-46 |
| MS.gene058719 | MS.gene64286 | 0.829326 | 5.48E-55 | -1.69E-46 |
| MS.gene058773 | MS.gene64286 | 0.853188 | 2.82E-61 | -1.69E-46 |
| MS.gene058838 | MS.gene64286 | 0.872773 | 2.46E-67 | -1.69E-46 |
| MS.gene059022 | MS.gene64286 | 0.880947 | 3.61E-70 | -1.69E-46 |
| MS.gene059023 | MS.gene64286 | 0.883467 | 4.38E-71 | -1.69E-46 |
| MS.gene05912 | MS.gene64286 | 0.842245 | 2.91E-58 | -1.69E-46 |
| MS.gene05913 | MS.gene64286 | 0.843609 | 1.26E-58 | -1.69E-46 |
| MS.gene059305 | MS.gene64286 | 0.800469 | 1.42E-48 | -1.69E-46 |
| MS.gene05934 | MS.gene64286 | 0.801497 | 8.76E-49 | -1.69E-46 |
| MS.gene059367 | MS.gene64286 | 0.865299 | 6.53E-65 | -1.69E-46 |
| MS.gene059368 | MS.gene64286 | 0.808012 | 3.82E-50 | -1.69E-46 |
| MS.gene059455 | MS.gene64286 | 0.81532 | 9.82E-52 | -1.69E-46 |
| MS.gene059526 | MS.gene64286 | -0.804796 | 1.82E-49 | -1.69E-46 |
| MS.gene059667 | MS.gene64286 | 0.87193 | 4.70E-67 | -1.69E-46 |
| MS.gene059677 | MS.gene64286 | 0.871642 | 5.85E-67 | -1.69E-46 |
| MS.gene059703 | MS.gene64286 | -0.816702 | 4.82E-52 | -1.69E-46 |
| MS.gene059718 | MS.gene64286 | 0.868923 | 4.55E-66 | -1.69E-46 |
| MS.gene059756 | MS.gene64286 | 0.844113 | 9.25E-59 | -1.69E-46 |
| MS.gene059801 | MS.gene64286 | 0.864355 | 1.29E-64 | -1.69E-46 |
| MS.gene059837 | MS.gene64286 | 0.874864 | 4.84E-68 | -1.69E-46 |
| MS.gene059865 | MS.gene64286 | 0.918762 | 1.04E-86 | -1.69E-46 |
| MS.gene05995 | MS.gene64286 | 0.805663 | 1.20E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene64286 | 0.831776 | 1.38E-55 | -1.69E-46 |
| MS.gene06000 | MS.gene64286 | 0.910673 | 1.44E-82 | -1.69E-46 |
| MS.gene06027 | MS.gene64286 | 0.823754 | 1.17E-53 | -1.69E-46 |
| MS.gene060295 | MS.gene64286 | 0.827189 | 1.80E-54 | -1.69E-46 |
| MS.gene060482 | MS.gene64286 | 0.82552 | 4.48E-54 | -1.69E-46 |
| MS.gene060526 | MS.gene64286 | 0.820782 | 5.72E-53 | -1.69E-46 |
| MS.gene060593 | MS.gene64286 | -0.802427 | 5.64E-49 | -1.69E-46 |
| MS.gene060595 | MS.gene64286 | -0.854708 | 1.03E-61 | -1.69E-46 |
| MS.gene060703 | MS.gene64286 | 0.905322 | 4.85E-80 | -1.69E-46 |
| MS.gene060762 | MS.gene64286 | 0.889925 | 1.57E-73 | -1.69E-46 |
| MS.gene060778 | MS.gene64286 | 0.915647 | 4.59E-85 | -1.69E-46 |
| MS.gene06077 | MS.gene64286 | 0.901888 | 1.70E-78 | -1.69E-46 |
| MS.gene060823 | MS.gene64286 | -0.826719 | 2.32E-54 | -1.69E-46 |
| MS.gene060835 | MS.gene64286 | 0.833786 | 4.37E-56 | -1.69E-46 |
| MS.gene06092 | MS.gene64286 | 0.821538 | 3.83E-53 | -1.69E-46 |
| MS.gene06097 | MS.gene64286 | 0.869778 | 2.40E-66 | -1.69E-46 |
| MS.gene060982 | MS.gene64286 | 0.942052 | 1.42E-101 | -1.69E-46 |
| MS.gene061044 | MS.gene64286 | -0.835586 | 1.54E-56 | -1.69E-46 |
| MS.gene061150 | MS.gene64286 | 0.844161 | 8.97E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64286.t1 | MTR_1g046620 | 99.324 | 740 | 5 | 0 | 1 | 740 | 1 | 740 | 0.0 | 1496 |
| MS.gene64286.t1 | MTR_6g038750 | 38.063 | 599 | 323 | 10 | 133 | 731 | 78 | 628 | 1.55e-133 | 412 |
| MS.gene64286.t1 | MTR_4g026450 | 42.888 | 464 | 256 | 5 | 132 | 589 | 100 | 560 | 2.99e-131 | 406 |
| MS.gene64286.t1 | MTR_0053s0030 | 37.186 | 597 | 330 | 10 | 132 | 708 | 88 | 659 | 7.29e-123 | 384 |
| MS.gene64286.t1 | MTR_1g009860 | 39.093 | 463 | 259 | 7 | 148 | 600 | 95 | 544 | 1.59e-101 | 325 |
| MS.gene64286.t1 | MTR_1g009860 | 39.093 | 463 | 259 | 7 | 148 | 600 | 95 | 544 | 6.60e-101 | 325 |
| MS.gene64286.t1 | MTR_3g105760 | 36.437 | 494 | 282 | 7 | 199 | 677 | 136 | 612 | 1.31e-97 | 317 |
| MS.gene64286.t1 | MTR_1g095480 | 32.845 | 478 | 289 | 8 | 126 | 574 | 132 | 606 | 2.33e-79 | 266 |
| MS.gene64286.t1 | MTR_1g095480 | 32.311 | 489 | 299 | 8 | 126 | 585 | 132 | 617 | 3.69e-78 | 268 |
| MS.gene64286.t1 | MTR_3g082750 | 34.169 | 439 | 259 | 9 | 142 | 558 | 150 | 580 | 1.41e-64 | 228 |
| MS.gene64286.t1 | MTR_8g091710 | 32.688 | 413 | 238 | 10 | 187 | 562 | 198 | 607 | 3.94e-55 | 202 |
| MS.gene64286.t1 | MTR_3g094740 | 32.614 | 417 | 239 | 10 | 173 | 552 | 195 | 606 | 8.08e-55 | 201 |
| MS.gene64286.t1 | MTR_3g094740 | 32.614 | 417 | 239 | 10 | 173 | 552 | 195 | 606 | 1.12e-54 | 201 |
| MS.gene64286.t1 | MTR_0224s0030 | 29.630 | 216 | 150 | 1 | 370 | 585 | 20 | 233 | 6.97e-37 | 140 |
| MS.gene64286.t1 | MTR_5g068050 | 26.190 | 378 | 240 | 7 | 187 | 529 | 128 | 501 | 9.05e-34 | 137 |
| MS.gene64286.t1 | MTR_4g104070 | 28.276 | 290 | 176 | 8 | 177 | 443 | 62 | 342 | 5.36e-29 | 122 |
| MS.gene64286.t1 | MTR_1g008980 | 26.781 | 351 | 220 | 11 | 144 | 468 | 9 | 348 | 1.03e-23 | 107 |
| MS.gene64286.t1 | MTR_3g070410 | 25.616 | 406 | 243 | 12 | 174 | 535 | 76 | 466 | 1.14e-21 | 100 |
| MS.gene64286.t1 | MTR_4g091510 | 26.471 | 306 | 187 | 8 | 183 | 455 | 209 | 509 | 4.52e-21 | 98.6 |
| MS.gene64286.t1 | MTR_4g091510 | 26.471 | 306 | 187 | 8 | 183 | 455 | 214 | 514 | 4.92e-21 | 98.6 |
| MS.gene64286.t1 | MTR_8g464860 | 25.000 | 288 | 187 | 6 | 187 | 446 | 210 | 496 | 1.28e-18 | 90.9 |
| MS.gene64286.t1 | MTR_5g077080 | 26.449 | 276 | 172 | 9 | 198 | 455 | 98 | 360 | 1.45e-18 | 90.5 |
| MS.gene64286.t1 | MTR_2g011640 | 25.753 | 299 | 195 | 7 | 183 | 455 | 262 | 559 | 1.97e-18 | 90.5 |
| MS.gene64286.t1 | MTR_1g085610 | 25.874 | 286 | 188 | 10 | 197 | 469 | 240 | 514 | 2.39e-13 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64286.t1 | AT3G24190 | 81.233 | 746 | 131 | 4 | 1 | 737 | 1 | 746 | 0.0 | 1213 |
| MS.gene64286.t1 | AT1G79600 | 42.581 | 465 | 258 | 5 | 132 | 590 | 95 | 556 | 8.41e-129 | 400 |
| MS.gene64286.t1 | AT1G71810 | 37.931 | 551 | 301 | 10 | 121 | 670 | 62 | 572 | 1.02e-122 | 383 |
| MS.gene64286.t1 | AT5G24970 | 36.576 | 514 | 278 | 8 | 183 | 669 | 136 | 628 | 1.10e-101 | 329 |
| MS.gene64286.t1 | AT4G31390 | 38.696 | 460 | 265 | 6 | 148 | 600 | 131 | 580 | 2.48e-101 | 327 |
| MS.gene64286.t1 | AT5G24970 | 36.576 | 514 | 278 | 8 | 183 | 669 | 175 | 667 | 9.67e-101 | 327 |
| MS.gene64286.t1 | AT5G24970 | 35.992 | 514 | 278 | 9 | 183 | 669 | 136 | 625 | 3.10e-97 | 317 |
| MS.gene64286.t1 | AT4G31390 | 36.304 | 460 | 251 | 6 | 148 | 600 | 131 | 555 | 6.91e-91 | 298 |
| MS.gene64286.t1 | AT4G31390 | 39.695 | 393 | 220 | 6 | 217 | 602 | 1 | 383 | 2.62e-88 | 286 |
| MS.gene64286.t1 | AT2G39190 | 33.958 | 480 | 290 | 7 | 129 | 584 | 142 | 618 | 1.03e-82 | 280 |
| MS.gene64286.t1 | AT3G07700 | 34.867 | 413 | 249 | 8 | 169 | 568 | 171 | 576 | 4.58e-64 | 227 |
| MS.gene64286.t1 | AT3G07700 | 34.867 | 413 | 249 | 8 | 169 | 568 | 171 | 576 | 4.58e-64 | 227 |
| MS.gene64286.t1 | AT3G07700 | 34.867 | 413 | 249 | 8 | 169 | 568 | 171 | 576 | 4.58e-64 | 227 |
| MS.gene64286.t1 | AT3G07700 | 33.784 | 444 | 241 | 11 | 169 | 568 | 171 | 605 | 1.02e-59 | 215 |
| MS.gene64286.t1 | AT5G64940 | 33.411 | 428 | 242 | 10 | 174 | 562 | 210 | 633 | 1.17e-53 | 198 |
| MS.gene64286.t1 | AT5G64940 | 33.411 | 428 | 242 | 10 | 174 | 562 | 210 | 633 | 1.17e-53 | 198 |
| MS.gene64286.t1 | AT5G05200 | 27.105 | 380 | 234 | 7 | 187 | 529 | 129 | 502 | 3.38e-33 | 135 |
| MS.gene64286.t1 | AT2G39190 | 36.564 | 227 | 137 | 5 | 129 | 352 | 142 | 364 | 7.67e-33 | 131 |
| MS.gene64286.t1 | AT4G24810 | 28.070 | 285 | 183 | 7 | 177 | 443 | 16 | 296 | 5.94e-31 | 124 |
| MS.gene64286.t1 | AT4G24810 | 25.916 | 382 | 254 | 11 | 177 | 537 | 16 | 389 | 6.11e-31 | 127 |
| MS.gene64286.t1 | AT4G24810 | 25.916 | 382 | 254 | 11 | 177 | 537 | 16 | 389 | 6.11e-31 | 127 |
| MS.gene64286.t1 | AT4G24810 | 28.070 | 285 | 183 | 7 | 177 | 443 | 16 | 296 | 8.56e-31 | 123 |
| MS.gene64286.t1 | AT4G24810 | 25.916 | 382 | 254 | 11 | 177 | 537 | 59 | 432 | 1.26e-30 | 126 |
| MS.gene64286.t1 | AT4G24810 | 25.707 | 389 | 253 | 12 | 177 | 537 | 16 | 396 | 2.23e-29 | 122 |
| MS.gene64286.t1 | AT5G50330 | 24.679 | 312 | 209 | 6 | 177 | 468 | 59 | 364 | 7.87e-27 | 115 |
| MS.gene64286.t1 | AT1G65950 | 32.353 | 272 | 161 | 11 | 174 | 431 | 89 | 351 | 8.95e-26 | 112 |
| MS.gene64286.t1 | AT1G65950 | 27.830 | 424 | 252 | 17 | 174 | 575 | 89 | 480 | 9.22e-26 | 112 |
| MS.gene64286.t1 | AT5G24810 | 28.387 | 310 | 185 | 9 | 184 | 468 | 98 | 395 | 2.90e-22 | 103 |
| MS.gene64286.t1 | AT5G50330 | 22.756 | 312 | 199 | 7 | 177 | 468 | 59 | 348 | 4.48e-21 | 97.4 |
| MS.gene64286.t1 | AT2G40090 | 29.560 | 318 | 195 | 11 | 175 | 467 | 79 | 392 | 6.89e-21 | 97.8 |
| MS.gene64286.t1 | AT1G61640 | 27.083 | 288 | 171 | 10 | 195 | 449 | 221 | 502 | 7.00e-20 | 94.7 |
| MS.gene64286.t1 | AT1G61640 | 26.761 | 284 | 177 | 8 | 195 | 449 | 221 | 502 | 1.13e-19 | 94.4 |
| MS.gene64286.t1 | AT1G11390 | 24.825 | 286 | 189 | 5 | 195 | 455 | 224 | 508 | 1.69e-19 | 93.6 |
| MS.gene64286.t1 | AT5G24810 | 26.686 | 341 | 182 | 11 | 184 | 468 | 98 | 426 | 4.31e-19 | 93.2 |
| MS.gene64286.t1 | AT4G01660 | 27.304 | 293 | 175 | 11 | 197 | 469 | 238 | 512 | 5.62e-16 | 82.4 |
| MS.gene64286.t1 | AT1G61640 | 26.442 | 208 | 134 | 7 | 195 | 389 | 221 | 422 | 4.38e-11 | 66.6 |
Find 221 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATACTTTGCCCTTATAATT+AGG | 0.089687 | 1.3:-28287961 | MS.gene64286:CDS |
| GCTTTACGTTACACTATATA+TGG | 0.194317 | 1.3:-28287219 | MS.gene64286:CDS |
| TCAAGAACTCCAGCACTTTC+TGG | 0.201641 | 1.3:+28285997 | None:intergenic |
| AGCTAGTATTACTGCATATT+GGG | 0.247428 | 1.3:-28293936 | MS.gene64286:CDS |
| CCCCGATAGCCCTAATTATA+AGG | 0.248780 | 1.3:+28287951 | None:intergenic |
| ATACTTTGCCCTTATAATTA+GGG | 0.262467 | 1.3:-28287960 | MS.gene64286:CDS |
| ATCTCTCGGACAGGTATATA+AGG | 0.270512 | 1.3:-28292048 | MS.gene64286:CDS |
| AAACCTGTCAACGGTGTCTC+TGG | 0.278838 | 1.3:-28294765 | MS.gene64286:CDS |
| AATTAGGGCTATCGGGGTTC+TGG | 0.286988 | 1.3:-28287945 | MS.gene64286:CDS |
| AAGGGCCGCCTGAAGGAAAA+TGG | 0.288141 | 1.3:-28292029 | MS.gene64286:CDS |
| GTAGGTACCATACCGAAAAT+AGG | 0.294048 | 1.3:+28286092 | None:intergenic |
| CAGCTAGTATTACTGCATAT+TGG | 0.297042 | 1.3:-28293937 | MS.gene64286:CDS |
| AATTATACCTGTGCAATATA+TGG | 0.302271 | 1.3:+28287869 | None:intergenic |
| ACGTGAAATTGTGACATCTT+TGG | 0.305343 | 1.3:-28292878 | MS.gene64286:CDS |
| AACTTTATCCTCTTCGGTTA+TGG | 0.312758 | 1.3:+28286034 | None:intergenic |
| GTATACTTGCTGTAAGTTCT+TGG | 0.331390 | 1.3:+28290423 | None:intergenic |
| CCCTTATAATTAGGGCTATC+GGG | 0.332300 | 1.3:-28287952 | MS.gene64286:CDS |
| CGTGAAATTGTGACATCTTT+GGG | 0.332945 | 1.3:-28292877 | MS.gene64286:CDS |
| GGATCTAAATTGACTCCATC+TGG | 0.344181 | 1.3:+28288112 | None:intergenic |
| TTATTTCAGCTGCTTGATAC+TGG | 0.344397 | 1.3:-28289545 | MS.gene64286:intron |
| TTCTTAGCAGATTATCTTCT+CGG | 0.345784 | 1.3:-28285718 | MS.gene64286:intron |
| GGTTGTTGTGGCGGTTGGAA+TGG | 0.348299 | 1.3:+28294895 | None:intergenic |
| CTAATTATAAGGGCAAAGTA+TGG | 0.349214 | 1.3:+28287962 | None:intergenic |
| TTTAACGAAGTCTTTCACTA+TGG | 0.351984 | 1.3:+28288147 | None:intergenic |
| CCTGAAGGAAAATGGGGATT+TGG | 0.353495 | 1.3:-28292021 | MS.gene64286:CDS |
| GTTGTTGTGGCGGTTGGAAT+GGG | 0.354393 | 1.3:+28294896 | None:intergenic |
| GTCTTTGACCAGGCTTTAGA+AGG | 0.356423 | 1.3:-28288067 | MS.gene64286:CDS |
| CAGTATAACTTTATCCTCTT+CGG | 0.369075 | 1.3:+28286028 | None:intergenic |
| TTGACCGACGATCAAAAGTA+TGG | 0.371660 | 1.3:-28288214 | MS.gene64286:CDS |
| GCCCTTATAATTAGGGCTAT+CGG | 0.378622 | 1.3:-28287953 | MS.gene64286:CDS |
| AGGGAGGTTGTTGTGGCGGT+TGG | 0.379114 | 1.3:+28294890 | None:intergenic |
| CAGGTCTTTCTTCATCATTT+CGG | 0.380540 | 1.3:+28291646 | None:intergenic |
| CCGGTCAGAATATCTCTTGC+CGG | 0.382765 | 1.3:-28287064 | MS.gene64286:CDS |
| GTTGTAACCGGAGCAGGTTT+AGG | 0.383753 | 1.3:+28294822 | None:intergenic |
| CCATTGATTTATTCATTATC+CGG | 0.385394 | 1.3:-28291956 | MS.gene64286:CDS |
| TACACTATATATGGGAAATC+TGG | 0.386187 | 1.3:-28287210 | MS.gene64286:CDS |
| AGGTCTCCATTGACGTGGTT+GGG | 0.391236 | 1.3:-28291745 | MS.gene64286:CDS |
| ACGAAGTCTTTCACTATGGC+TGG | 0.396425 | 1.3:+28288151 | None:intergenic |
| GTGCAGTTATTATCTGTTGC+TGG | 0.398582 | 1.3:-28293881 | MS.gene64286:CDS |
| TTTGCAAGCACTGGCAAGAT+AGG | 0.409252 | 1.3:+28288091 | None:intergenic |
| CATTATCCGGAACCTTGGTT+TGG | 0.410931 | 1.3:-28291943 | MS.gene64286:CDS |
| CCGTCAACGGTTCTTCTTCA+AGG | 0.412132 | 1.3:-28294800 | MS.gene64286:CDS |
| AGAGACACCGTTGACAGGTT+TGG | 0.413955 | 1.3:+28294767 | None:intergenic |
| TATGTGAATGAAGGTGAAAA+TGG | 0.419960 | 1.3:-28291680 | MS.gene64286:CDS |
| TAAGAGAGTGAGAGCGCAAA+TGG | 0.424054 | 1.3:-28294622 | MS.gene64286:CDS |
| TAGGTCTCCATTGACGTGGT+TGG | 0.426485 | 1.3:-28291746 | MS.gene64286:CDS |
| GAACCGTTGACGGTTGTAAC+CGG | 0.426598 | 1.3:+28294810 | None:intergenic |
| CCCCTCCACCTTCTAAAGCC+TGG | 0.432654 | 1.3:+28288059 | None:intergenic |
| AGCTTGGGCTTATTACTAAC+CGG | 0.433633 | 1.3:-28287083 | MS.gene64286:CDS |
| TGGAAAGCTACCGGCGGCAA+TGG | 0.437249 | 1.3:+28292182 | None:intergenic |
| GGTCCAGCATACATAAAACT+TGG | 0.438925 | 1.3:-28292856 | MS.gene64286:CDS |
| GGCTCTTCGAAAATTTCCTC+AGG | 0.440365 | 1.3:-28291922 | MS.gene64286:intron |
| CTGGAAGGGATAGCTTTAGT+AGG | 0.442898 | 1.3:-28287926 | MS.gene64286:CDS |
| TCATCAACAATGGCAAAATC+AGG | 0.448007 | 1.3:+28287899 | None:intergenic |
| TTTATTTGCATTCAGAGAAT+CGG | 0.451265 | 1.3:-28294663 | MS.gene64286:intron |
| AGAGGATCTGAAAGGGAGTA+TGG | 0.453042 | 1.3:-28287109 | MS.gene64286:CDS |
| GCCCGTGTTTCCACTGGCTG+CGG | 0.453117 | 1.3:+28287015 | None:intergenic |
| GCTGCAGGTGACAGTATATC+AGG | 0.453190 | 1.3:+28292814 | None:intergenic |
| AATGGAAGAAGATGAACAAT+TGG | 0.455274 | 1.3:-28294604 | MS.gene64286:CDS |
| AAACTTGCAATACTTGACTT+TGG | 0.456974 | 1.3:-28289470 | MS.gene64286:intron |
| GAAGAGCCAAACCAAGGTTC+CGG | 0.457788 | 1.3:+28291937 | None:intergenic |
| CCCGATAGCCCTAATTATAA+GGG | 0.458006 | 1.3:+28287952 | None:intergenic |
| TTCTCGGGTTGCGTGGGATG+TGG | 0.458420 | 1.3:-28293849 | MS.gene64286:CDS |
| TGCAACTCTGTCATTGCTGC+AGG | 0.460173 | 1.3:+28292799 | None:intergenic |
| ATAACCAGAATGAGGTTGCC+AGG | 0.461543 | 1.3:-28292912 | MS.gene64286:intron |
| TCTGTCAAGCACATCTAGTC+AGG | 0.463598 | 1.3:-28285961 | MS.gene64286:intron |
| CTTTACGTTACACTATATAT+GGG | 0.466517 | 1.3:-28287218 | MS.gene64286:CDS |
| CCTCGTCCAAAAGAAATTCT+CGG | 0.466532 | 1.3:+28286953 | None:intergenic |
| GTCGGAGAATTAGTTAATGT+TGG | 0.469559 | 1.3:-28290333 | MS.gene64286:CDS |
| ATTTGCAGATGATGTGGCTA+TGG | 0.471517 | 1.3:-28292268 | MS.gene64286:CDS |
| AGTCATCTGCTACCTAAAAC+AGG | 0.471762 | 1.3:-28290310 | MS.gene64286:intron |
| TTTATCCTCTTCGGTTATGG+TGG | 0.473199 | 1.3:+28286037 | None:intergenic |
| GTGAAAGACTTCGTTAAACT+TGG | 0.475881 | 1.3:-28288142 | MS.gene64286:CDS |
| AGGGCCGCCCGTGTTTCCAC+TGG | 0.477558 | 1.3:+28287009 | None:intergenic |
| TTCGGTATGGTACCTACCAT+TGG | 0.478269 | 1.3:-28286086 | MS.gene64286:CDS |
| TACCATTTGTTCCCTTGTCA+CGG | 0.478757 | 1.3:+28286151 | None:intergenic |
| CTCCATTGACGTGGTTGGGT+TGG | 0.481448 | 1.3:-28291741 | MS.gene64286:CDS |
| AGGGCCGCCTGAAGGAAAAT+GGG | 0.482279 | 1.3:-28292028 | MS.gene64286:CDS |
| AACCAACCCAACCACGTCAA+TGG | 0.482943 | 1.3:+28291739 | None:intergenic |
| CCTTGAAGAAGAACCGTTGA+CGG | 0.483993 | 1.3:+28294800 | None:intergenic |
| TTGACGGTTGTAACCGGAGC+AGG | 0.484211 | 1.3:+28294816 | None:intergenic |
| GTAACTGTCTCGAGAACAAA+AGG | 0.487145 | 1.3:+28291978 | None:intergenic |
| AACCTGTCAACGGTGTCTCT+GGG | 0.487214 | 1.3:-28294764 | MS.gene64286:CDS |
| ACACCGTTGACAGGTTTGGC+AGG | 0.488797 | 1.3:+28294771 | None:intergenic |
| TGCCGTGACAAGGGAACAAA+TGG | 0.489394 | 1.3:-28286153 | MS.gene64286:CDS |
| CCGGATAATGAATAAATCAA+TGG | 0.495772 | 1.3:+28291956 | None:intergenic |
| CACCGATCCTAAACCTGCTC+CGG | 0.497252 | 1.3:-28294829 | MS.gene64286:CDS |
| GACCAGGCTTTAGAAGGTGG+AGG | 0.497384 | 1.3:-28288061 | MS.gene64286:CDS |
| TGCATTCTGAACTCCTAGTA+AGG | 0.499806 | 1.3:+28286118 | None:intergenic |
| GTAAGAATTATGTCCTTACT+AGG | 0.500477 | 1.3:-28286131 | MS.gene64286:CDS |
| AAAGGGAGTATGGCTGAGCT+TGG | 0.501167 | 1.3:-28287099 | MS.gene64286:CDS |
| TAGGTACCATACCGAAAATA+GGG | 0.501824 | 1.3:+28286093 | None:intergenic |
| GGTTGGGTTGGTTGACGAGT+GGG | 0.502534 | 1.3:-28291729 | MS.gene64286:CDS |
| TCTTAGCAGATTATCTTCTC+GGG | 0.503708 | 1.3:-28285717 | MS.gene64286:intron |
| TAATTATAAGGGCAAAGTAT+GGG | 0.504028 | 1.3:+28287963 | None:intergenic |
| CGGTCAGAATATCTCTTGCC+GGG | 0.507660 | 1.3:-28287063 | MS.gene64286:CDS |
| GGAAAGCTACCGGCGGCAAT+GGG | 0.509268 | 1.3:+28292183 | None:intergenic |
| GTGCTGGAGTTCTTGACTGC+AGG | 0.510421 | 1.3:-28285990 | MS.gene64286:CDS |
| GGAGGGTTCTTACAACAGAA+TGG | 0.511423 | 1.3:-28290395 | MS.gene64286:CDS |
| TTCACGTATTTCAATAGCCC+TGG | 0.512127 | 1.3:+28292894 | None:intergenic |
| CAATATGCAGTAATACTAGC+TGG | 0.516377 | 1.3:+28293938 | None:intergenic |
| AATATGATCCGCACTCCTGA+TGG | 0.516841 | 1.3:-28289494 | MS.gene64286:CDS |
| GCTCTAATTGAAGAGGAACT+TGG | 0.518860 | 1.3:-28292246 | MS.gene64286:CDS |
| AACCGCAGCCAGTGGAAACA+CGG | 0.518965 | 1.3:-28287017 | MS.gene64286:CDS |
| TTACTGATAGAGACTCTTGA+CGG | 0.519048 | 1.3:-28287265 | MS.gene64286:intron |
| CGGTGGCGACAGCGGAGATA+CGG | 0.520949 | 1.3:+28294847 | None:intergenic |
| GCTTGCAAAGGTCTTTGACC+AGG | 0.523145 | 1.3:-28288077 | MS.gene64286:CDS |
| ACCCCAGAGACACCGTTGAC+AGG | 0.523907 | 1.3:+28294762 | None:intergenic |
| TCAAAGACCTTTGCAAGCAC+TGG | 0.524525 | 1.3:+28288082 | None:intergenic |
| GAATGGGAGGAGCGGAGTAA+AGG | 0.525076 | 1.3:+28294912 | None:intergenic |
| AGGGCTATCGGGGTTCTGGA+AGG | 0.528388 | 1.3:-28287941 | MS.gene64286:CDS |
| TCTCTCGGACAGGTATATAA+GGG | 0.528745 | 1.3:-28292047 | MS.gene64286:CDS |
| GACGGAGAGGGAGGTTGTTG+TGG | 0.530054 | 1.3:+28294883 | None:intergenic |
| GAGGTGGAGAGGATCTGAAA+GGG | 0.530444 | 1.3:-28287116 | MS.gene64286:CDS |
| TTATTCATTATCCGGAACCT+TGG | 0.531153 | 1.3:-28291948 | MS.gene64286:CDS |
| TCCTTCATTTGCAGATGATG+TGG | 0.531156 | 1.3:-28292274 | MS.gene64286:CDS |
| GGTGTTACAGACTGGAATCC+CGG | 0.531571 | 1.3:+28287045 | None:intergenic |
| CGGATGAATCCCCTCGGCTA+AGG | 0.532282 | 1.3:-28287245 | MS.gene64286:CDS |
| TTTGACCAGGCTTTAGAAGG+TGG | 0.532307 | 1.3:-28288064 | MS.gene64286:CDS |
| AATTGCTCATCTCATCCATC+GGG | 0.532594 | 1.3:-28288179 | MS.gene64286:CDS |
| AAACATCAACTTTCAGGAGC+TGG | 0.534626 | 1.3:-28288032 | MS.gene64286:CDS |
| TTTCATGCTGATCCTCACCC+GGG | 0.534686 | 1.3:-28289518 | MS.gene64286:CDS |
| GTTGTGGCGGTTGGAATGGG+AGG | 0.535522 | 1.3:+28294899 | None:intergenic |
| ACCAGGCTTTAGAAGGTGGA+GGG | 0.538065 | 1.3:-28288060 | MS.gene64286:CDS |
| GTGGGATGTGGTTAACAAGA+AGG | 0.539335 | 1.3:-28293837 | MS.gene64286:CDS |
| GCTACCGGCGGCAATGGGAG+AGG | 0.540075 | 1.3:+28292188 | None:intergenic |
| TTATCCTCTTCGGTTATGGT+GGG | 0.540872 | 1.3:+28286038 | None:intergenic |
| AAACTTGGTTTCATCCCAGA+TGG | 0.540981 | 1.3:-28288127 | MS.gene64286:CDS |
| TGCTAAAAGCGGAGGTGGAG+AGG | 0.541034 | 1.3:-28287127 | MS.gene64286:CDS |
| GCCACATCATCTGCAAATGA+AGG | 0.542980 | 1.3:+28292273 | None:intergenic |
| TCCACTGGCTGCGGTTGTTG+AGG | 0.543113 | 1.3:+28287024 | None:intergenic |
| AAGGGAGTATGGCTGAGCTT+GGG | 0.543384 | 1.3:-28287098 | MS.gene64286:CDS |
| GTATTGGACTCACCTGTGGC+AGG | 0.546086 | 1.3:+28291627 | None:intergenic |
| CCGCCTGCCAAACCTGTCAA+CGG | 0.550645 | 1.3:-28294774 | MS.gene64286:CDS |
| TGGTTGGGTTGGTTGACGAG+TGG | 0.551378 | 1.3:-28291730 | MS.gene64286:CDS |
| TCTTCATCATTTCGGCGAAG+CGG | 0.553476 | 1.3:+28291654 | None:intergenic |
| GGGCTATCGGGGTTCTGGAA+GGG | 0.553995 | 1.3:-28287940 | MS.gene64286:CDS |
| ATATGCAGCATCTCTCGGAC+AGG | 0.554501 | 1.3:-28292057 | MS.gene64286:intron |
| AAGTAGTGAATTTCTACCAT+TGG | 0.554621 | 1.3:-28293969 | MS.gene64286:CDS |
| CAATTGCTCATCTCATCCAT+CGG | 0.555375 | 1.3:-28288180 | MS.gene64286:CDS |
| AATTATAAGGGCAAAGTATG+GGG | 0.557155 | 1.3:+28287964 | None:intergenic |
| GGTATATAAGGGCCGCCTGA+AGG | 0.559240 | 1.3:-28292036 | MS.gene64286:CDS |
| CAGAGCAAAGAAAGCAATGT+CGG | 0.560609 | 1.3:-28290351 | MS.gene64286:CDS |
| TAATGATTCACTCTTTGCTG+AGG | 0.562844 | 1.3:-28294547 | MS.gene64286:CDS |
| TTGTGATGATGCTGTATCCA+TGG | 0.565765 | 1.3:+28294956 | None:intergenic |
| GGTTAACAAGAAGGTTAAAG+AGG | 0.566410 | 1.3:-28293828 | MS.gene64286:intron |
| ATGCGAGTTGCAACGGAGCG+AGG | 0.567245 | 1.3:+28293905 | None:intergenic |
| CTGCACAATGCGAGTTGCAA+CGG | 0.568797 | 1.3:+28293898 | None:intergenic |
| GGCGGTTGGAATGGGAGGAG+CGG | 0.569921 | 1.3:+28294904 | None:intergenic |
| CGGATCATATTCCCCGGGTG+AGG | 0.570070 | 1.3:+28289506 | None:intergenic |
| AAGAGGAACTTGGTCAGCCA+TGG | 0.574058 | 1.3:-28292236 | MS.gene64286:CDS |
| GAAACATATGCAGCATCTCT+CGG | 0.574141 | 1.3:-28292062 | MS.gene64286:intron |
| CCTTATAATTAGGGCTATCG+GGG | 0.576502 | 1.3:-28287951 | MS.gene64286:CDS |
| ACAGCTGCTAAAAGCGGAGG+TGG | 0.577054 | 1.3:-28287132 | MS.gene64286:CDS |
| ACCGCAGCCAGTGGAAACAC+GGG | 0.577557 | 1.3:-28287016 | MS.gene64286:CDS |
| GAACAATGTCCAGAAAGTGC+TGG | 0.577732 | 1.3:-28286006 | MS.gene64286:CDS |
| AGGGCATTGATGCCGTGACA+AGG | 0.579388 | 1.3:-28286163 | MS.gene64286:CDS |
| AGCCTATCCATATATTGCAC+AGG | 0.579392 | 1.3:-28287876 | MS.gene64286:intron |
| GAGAATCGGTGATGTTTCGA+AGG | 0.579400 | 1.3:-28294649 | MS.gene64286:CDS |
| GGAGTGCGGATCATATTCCC+CGG | 0.581565 | 1.3:+28289500 | None:intergenic |
| CCGTTGACAGGTTTGGCAGG+CGG | 0.583407 | 1.3:+28294774 | None:intergenic |
| AGCTGTAATAAAATTCTCAA+AGG | 0.583728 | 1.3:+28287149 | None:intergenic |
| CTTACAACAGAATGGATTGA+CGG | 0.585861 | 1.3:-28290387 | MS.gene64286:CDS |
| GTTGTTGAGGTGTTACAGAC+TGG | 0.588281 | 1.3:+28287037 | None:intergenic |
| GATCTAAATTGACTCCATCT+GGG | 0.588365 | 1.3:+28288113 | None:intergenic |
| TAGAACGACGGCGACGGAGA+GGG | 0.589130 | 1.3:+28294871 | None:intergenic |
| GTAAAGCACTCCTTAGCCGA+GGG | 0.589316 | 1.3:+28287235 | None:intergenic |
| TTTATTACAGCTGCTAAAAG+CGG | 0.589524 | 1.3:-28287138 | MS.gene64286:CDS |
| TACGGTTAGAACGACGGCGA+CGG | 0.590876 | 1.3:+28294865 | None:intergenic |
| GGAGGTGGAGAGGATCTGAA+AGG | 0.591483 | 1.3:-28287117 | MS.gene64286:CDS |
| GGGCATTGATGCCGTGACAA+GGG | 0.591814 | 1.3:-28286162 | MS.gene64286:CDS |
| GGCTTAAAGCGTCCAATGGT+AGG | 0.593364 | 1.3:+28286074 | None:intergenic |
| CCAGGCTTTAGAAGGTGGAG+GGG | 0.593525 | 1.3:-28288059 | MS.gene64286:CDS |
| GATTGACTGCAGATTGTCAA+GGG | 0.597608 | 1.3:-28286182 | MS.gene64286:intron |
| GGCTATGGCTCTAATTGAAG+AGG | 0.600972 | 1.3:-28292253 | MS.gene64286:CDS |
| TATCCTAAAAGGATAATCAA+AGG | 0.601605 | 1.3:+28287988 | None:intergenic |
| CCGGCAAGAGATATTCTGAC+CGG | 0.601734 | 1.3:+28287064 | None:intergenic |
| TCAACCTCTCCCATTGCCGC+CGG | 0.601960 | 1.3:-28292192 | MS.gene64286:intron |
| AACGACGGCGACGGAGAGGG+AGG | 0.604149 | 1.3:+28294874 | None:intergenic |
| ACCTCAACAACCGCAGCCAG+TGG | 0.604477 | 1.3:-28287025 | MS.gene64286:CDS |
| TACCTGTGCAATATATGGAT+AGG | 0.609388 | 1.3:+28287874 | None:intergenic |
| TAACCAGAATGAGGTTGCCA+GGG | 0.609399 | 1.3:-28292911 | MS.gene64286:intron |
| TGTTCAGCTACGTCTTGTTG+AGG | 0.610684 | 1.3:-28294520 | MS.gene64286:intron |
| TGGATAGGCTTCATCAACAA+TGG | 0.610971 | 1.3:+28287889 | None:intergenic |
| AACCGGAGCAGGTTTAGGAT+CGG | 0.611732 | 1.3:+28294827 | None:intergenic |
| TGCGGGCTTAAAGCGTCCAA+TGG | 0.612041 | 1.3:+28286070 | None:intergenic |
| CGGAGCAGGTTTAGGATCGG+TGG | 0.613125 | 1.3:+28294830 | None:intergenic |
| CTATGGCTGGATAATCCCGA+TGG | 0.613934 | 1.3:+28288164 | None:intergenic |
| GCTAGTATTACTGCATATTG+GGG | 0.615592 | 1.3:-28293935 | MS.gene64286:CDS |
| CAGTTATTATCTGTTGCTGG+AGG | 0.617050 | 1.3:-28293878 | MS.gene64286:CDS |
| TATGGTGGGTATAAGAGCTG+CGG | 0.617209 | 1.3:+28286052 | None:intergenic |
| TGATTGACTGCAGATTGTCA+AGG | 0.617529 | 1.3:-28286183 | MS.gene64286:intron |
| TATCTTGCCAGTGCTTGCAA+AGG | 0.619857 | 1.3:-28288089 | MS.gene64286:CDS |
| GAGTTAGACTATGTGAATGA+AGG | 0.620549 | 1.3:-28291689 | MS.gene64286:CDS |
| TTTAGGATCGGTGGCGACAG+CGG | 0.620973 | 1.3:+28294839 | None:intergenic |
| GGAGAGGGAGGTTGTTGTGG+CGG | 0.621652 | 1.3:+28294886 | None:intergenic |
| GCTCCGGTTACAACCGTCAA+CGG | 0.622992 | 1.3:-28294813 | MS.gene64286:CDS |
| ATGGTGGGTATAAGAGCTGC+GGG | 0.623020 | 1.3:+28286053 | None:intergenic |
| GTCCAGCATACATAAAACTT+GGG | 0.627157 | 1.3:-28292855 | MS.gene64286:CDS |
| ATTACAGCTGCTAAAAGCGG+AGG | 0.631202 | 1.3:-28287135 | MS.gene64286:CDS |
| ACCTGTCAACGGTGTCTCTG+GGG | 0.632413 | 1.3:-28294763 | MS.gene64286:intron |
| CTTACAGCAAGTATACATCA+AGG | 0.633014 | 1.3:-28290416 | MS.gene64286:CDS |
| CGTAAAGCACTCCTTAGCCG+AGG | 0.633199 | 1.3:+28287234 | None:intergenic |
| TTAGAACGACGGCGACGGAG+AGG | 0.635143 | 1.3:+28294870 | None:intergenic |
| AGTCTTATGAGAGGTCTTCG+TGG | 0.637623 | 1.3:-28294579 | MS.gene64286:CDS |
| GAGTGCGGATCATATTCCCC+GGG | 0.640776 | 1.3:+28289501 | None:intergenic |
| GATGAAGAAAGACCTGCCAC+AGG | 0.643598 | 1.3:-28291639 | MS.gene64286:intron |
| CTAGCTGGATCATACACCAA+TGG | 0.649269 | 1.3:+28293953 | None:intergenic |
| TATACCCACCATAACCGAAG+AGG | 0.649980 | 1.3:-28286042 | MS.gene64286:CDS |
| CGGAGATACGGTTAGAACGA+CGG | 0.651186 | 1.3:+28294859 | None:intergenic |
| TCTTGACGGATGAATCCCCT+CGG | 0.651670 | 1.3:-28287251 | MS.gene64286:CDS |
| CAGCAAGTATACATCAAGGA+GGG | 0.655370 | 1.3:-28290412 | MS.gene64286:CDS |
| ATTATAAGGGCAAAGTATGG+GGG | 0.655388 | 1.3:+28287965 | None:intergenic |
| GGGCCGCCTGAAGGAAAATG+GGG | 0.676507 | 1.3:-28292027 | MS.gene64286:CDS |
| TTCATGCTGATCCTCACCCG+GGG | 0.678599 | 1.3:-28289517 | MS.gene64286:CDS |
| GGAGTAAAGGATCGATTCCG+CGG | 0.682638 | 1.3:+28294925 | None:intergenic |
| GCAGCCAGTGGAAACACGGG+CGG | 0.689343 | 1.3:-28287013 | MS.gene64286:CDS |
| CAATTGGCAAGTCTTATGAG+AGG | 0.695083 | 1.3:-28294588 | MS.gene64286:CDS |
| ACAGCAAGTATACATCAAGG+AGG | 0.696808 | 1.3:-28290413 | MS.gene64286:CDS |
| TAAAGCACTCCTTAGCCGAG+GGG | 0.715422 | 1.3:+28287236 | None:intergenic |
| TCATCACAACTCATCTACCG+CGG | 0.718824 | 1.3:-28294942 | MS.gene64286:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 28285695 | 28294976 | 28285695 | ID=MS.gene64286 |
| chr1.3 | mRNA | 28285695 | 28294976 | 28285695 | ID=MS.gene64286.t1;Parent=MS.gene64286 |
| chr1.3 | exon | 28294764 | 28294976 | 28294764 | ID=MS.gene64286.t1.exon1;Parent=MS.gene64286.t1 |
| chr1.3 | CDS | 28294764 | 28294976 | 28294764 | ID=cds.MS.gene64286.t1;Parent=MS.gene64286.t1 |
| chr1.3 | exon | 28294521 | 28294670 | 28294521 | ID=MS.gene64286.t1.exon2;Parent=MS.gene64286.t1 |
| chr1.3 | CDS | 28294521 | 28294670 | 28294521 | ID=cds.MS.gene64286.t1;Parent=MS.gene64286.t1 |
| chr1.3 | exon | 28293829 | 28293999 | 28293829 | ID=MS.gene64286.t1.exon3;Parent=MS.gene64286.t1 |
| chr1.3 | CDS | 28293829 | 28293999 | 28293829 | ID=cds.MS.gene64286.t1;Parent=MS.gene64286.t1 |
| chr1.3 | exon | 28292783 | 28292926 | 28292783 | ID=MS.gene64286.t1.exon4;Parent=MS.gene64286.t1 |
| chr1.3 | CDS | 28292783 | 28292926 | 28292783 | ID=cds.MS.gene64286.t1;Parent=MS.gene64286.t1 |
| chr1.3 | exon | 28292193 | 28292298 | 28292193 | ID=MS.gene64286.t1.exon5;Parent=MS.gene64286.t1 |
| chr1.3 | CDS | 28292193 | 28292298 | 28292193 | ID=cds.MS.gene64286.t1;Parent=MS.gene64286.t1 |
| chr1.3 | exon | 28291923 | 28292071 | 28291923 | ID=MS.gene64286.t1.exon6;Parent=MS.gene64286.t1 |
| chr1.3 | CDS | 28291923 | 28292071 | 28291923 | ID=cds.MS.gene64286.t1;Parent=MS.gene64286.t1 |
| chr1.3 | exon | 28291640 | 28291765 | 28291640 | ID=MS.gene64286.t1.exon7;Parent=MS.gene64286.t1 |
| chr1.3 | CDS | 28291640 | 28291765 | 28291640 | ID=cds.MS.gene64286.t1;Parent=MS.gene64286.t1 |
| chr1.3 | exon | 28290311 | 28290454 | 28290311 | ID=MS.gene64286.t1.exon8;Parent=MS.gene64286.t1 |
| chr1.3 | CDS | 28290311 | 28290454 | 28290311 | ID=cds.MS.gene64286.t1;Parent=MS.gene64286.t1 |
| chr1.3 | exon | 28289471 | 28289558 | 28289471 | ID=MS.gene64286.t1.exon9;Parent=MS.gene64286.t1 |
| chr1.3 | CDS | 28289471 | 28289558 | 28289471 | ID=cds.MS.gene64286.t1;Parent=MS.gene64286.t1 |
| chr1.3 | exon | 28287877 | 28288250 | 28287877 | ID=MS.gene64286.t1.exon10;Parent=MS.gene64286.t1 |
| chr1.3 | CDS | 28287877 | 28288250 | 28287877 | ID=cds.MS.gene64286.t1;Parent=MS.gene64286.t1 |
| chr1.3 | exon | 28286954 | 28287277 | 28286954 | ID=MS.gene64286.t1.exon11;Parent=MS.gene64286.t1 |
| chr1.3 | CDS | 28286954 | 28287277 | 28286954 | ID=cds.MS.gene64286.t1;Parent=MS.gene64286.t1 |
| chr1.3 | exon | 28285962 | 28286192 | 28285962 | ID=MS.gene64286.t1.exon12;Parent=MS.gene64286.t1 |
| chr1.3 | CDS | 28285962 | 28286192 | 28285962 | ID=cds.MS.gene64286.t1;Parent=MS.gene64286.t1 |
| chr1.3 | exon | 28285695 | 28285730 | 28285695 | ID=MS.gene64286.t1.exon13;Parent=MS.gene64286.t1 |
| chr1.3 | CDS | 28285695 | 28285730 | 28285695 | ID=cds.MS.gene64286.t1;Parent=MS.gene64286.t1 |
| Gene Sequence |
| Protein sequence |
