Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28961.t1 | XP_013456554.1 | 98.8 | 167 | 2 | 0 | 1 | 167 | 1 | 167 | 2.30E-89 | 339.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28961.t1 | Q9T0I5 | 58.2 | 134 | 47 | 3 | 34 | 166 | 32 | 157 | 3.1e-34 | 147.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28961.t1 | A0A072UXI7 | 98.8 | 167 | 2 | 0 | 1 | 167 | 1 | 167 | 1.7e-89 | 339.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene28961 | 0.804231 | 2.39E-49 | -1.69E-46 |
| MS.gene049171 | MS.gene28961 | 0.850465 | 1.67E-60 | -1.69E-46 |
| MS.gene049173 | MS.gene28961 | 0.859416 | 4.20E-63 | -1.69E-46 |
| MS.gene049217 | MS.gene28961 | 0.883453 | 4.43E-71 | -1.69E-46 |
| MS.gene049222 | MS.gene28961 | 0.848556 | 5.69E-60 | -1.69E-46 |
| MS.gene049232 | MS.gene28961 | 0.803091 | 4.11E-49 | -1.69E-46 |
| MS.gene049285 | MS.gene28961 | 0.897826 | 9.64E-77 | -1.69E-46 |
| MS.gene049320 | MS.gene28961 | 0.888425 | 5.97E-73 | -1.69E-46 |
| MS.gene049369 | MS.gene28961 | 0.821454 | 4.00E-53 | -1.69E-46 |
| MS.gene04939 | MS.gene28961 | 0.806453 | 8.17E-50 | -1.69E-46 |
| MS.gene049427 | MS.gene28961 | 0.849027 | 4.21E-60 | -1.69E-46 |
| MS.gene049491 | MS.gene28961 | 0.806266 | 8.94E-50 | -1.69E-46 |
| MS.gene049609 | MS.gene28961 | 0.838436 | 2.88E-57 | -1.69E-46 |
| MS.gene049614 | MS.gene28961 | 0.849453 | 3.20E-60 | -1.69E-46 |
| MS.gene049633 | MS.gene28961 | 0.818472 | 1.93E-52 | -1.69E-46 |
| MS.gene049805 | MS.gene28961 | 0.855377 | 6.57E-62 | -1.69E-46 |
| MS.gene049828 | MS.gene28961 | 0.814158 | 1.78E-51 | -1.69E-46 |
| MS.gene049907 | MS.gene28961 | 0.815782 | 7.75E-52 | -1.69E-46 |
| MS.gene050076 | MS.gene28961 | 0.817628 | 2.99E-52 | -1.69E-46 |
| MS.gene05010 | MS.gene28961 | 0.826066 | 3.33E-54 | -1.69E-46 |
| MS.gene050163 | MS.gene28961 | 0.893939 | 3.94E-75 | -1.69E-46 |
| MS.gene050165 | MS.gene28961 | 0.873377 | 1.54E-67 | -1.69E-46 |
| MS.gene050333 | MS.gene28961 | 0.877086 | 8.33E-69 | -1.69E-46 |
| MS.gene050432 | MS.gene28961 | 0.836752 | 7.78E-57 | -1.69E-46 |
| MS.gene050444 | MS.gene28961 | 0.80767 | 4.51E-50 | -1.69E-46 |
| MS.gene050475 | MS.gene28961 | -0.807777 | 4.28E-50 | -1.69E-46 |
| MS.gene050504 | MS.gene28961 | 0.854795 | 9.70E-62 | -1.69E-46 |
| MS.gene050518 | MS.gene28961 | 0.876489 | 1.34E-68 | -1.69E-46 |
| MS.gene050520 | MS.gene28961 | 0.827263 | 1.72E-54 | -1.69E-46 |
| MS.gene050541 | MS.gene28961 | -0.803055 | 4.18E-49 | -1.69E-46 |
| MS.gene050577 | MS.gene28961 | 0.812787 | 3.56E-51 | -1.69E-46 |
| MS.gene050593 | MS.gene28961 | 0.844981 | 5.40E-59 | -1.69E-46 |
| MS.gene050612 | MS.gene28961 | 0.870808 | 1.10E-66 | -1.69E-46 |
| MS.gene050662 | MS.gene28961 | 0.829523 | 4.91E-55 | -1.69E-46 |
| MS.gene050675 | MS.gene28961 | 0.865798 | 4.55E-65 | -1.69E-46 |
| MS.gene050686 | MS.gene28961 | 0.854513 | 1.17E-61 | -1.69E-46 |
| MS.gene050699 | MS.gene28961 | 0.878866 | 1.99E-69 | -1.69E-46 |
| MS.gene050747 | MS.gene28961 | 0.816561 | 5.19E-52 | -1.69E-46 |
| MS.gene050767 | MS.gene28961 | 0.898176 | 6.86E-77 | -1.69E-46 |
| MS.gene050770 | MS.gene28961 | 0.899492 | 1.88E-77 | -1.69E-46 |
| MS.gene050772 | MS.gene28961 | 0.889391 | 2.53E-73 | -1.69E-46 |
| MS.gene05080 | MS.gene28961 | 0.802964 | 4.37E-49 | -1.69E-46 |
| MS.gene050950 | MS.gene28961 | 0.815093 | 1.10E-51 | -1.69E-46 |
| MS.gene050986 | MS.gene28961 | 0.860405 | 2.11E-63 | -1.69E-46 |
| MS.gene05100 | MS.gene28961 | 0.877149 | 7.92E-69 | -1.69E-46 |
| MS.gene05101 | MS.gene28961 | 0.819529 | 1.11E-52 | -1.69E-46 |
| MS.gene05105 | MS.gene28961 | 0.826757 | 2.28E-54 | -1.69E-46 |
| MS.gene051228 | MS.gene28961 | 0.855562 | 5.81E-62 | -1.69E-46 |
| MS.gene051255 | MS.gene28961 | 0.800517 | 1.39E-48 | -1.69E-46 |
| MS.gene051387 | MS.gene28961 | 0.826229 | 3.04E-54 | -1.69E-46 |
| MS.gene051434 | MS.gene28961 | 0.811783 | 5.89E-51 | -1.69E-46 |
| MS.gene051551 | MS.gene28961 | 0.837611 | 4.69E-57 | -1.69E-46 |
| MS.gene051666 | MS.gene28961 | 0.836877 | 7.23E-57 | -1.69E-46 |
| MS.gene051692 | MS.gene28961 | 0.837853 | 4.07E-57 | -1.69E-46 |
| MS.gene051694 | MS.gene28961 | 0.804806 | 1.81E-49 | -1.69E-46 |
| MS.gene051810 | MS.gene28961 | 0.893307 | 7.10E-75 | -1.69E-46 |
| MS.gene051858 | MS.gene28961 | 0.861942 | 7.19E-64 | -1.69E-46 |
| MS.gene051949 | MS.gene28961 | 0.821832 | 3.27E-53 | -1.69E-46 |
| MS.gene052271 | MS.gene28961 | 0.994825 | 1.57E-210 | -1.69E-46 |
| MS.gene052290 | MS.gene28961 | 0.841175 | 5.57E-58 | -1.69E-46 |
| MS.gene052310 | MS.gene28961 | 0.80115 | 1.03E-48 | -1.69E-46 |
| MS.gene052326 | MS.gene28961 | 0.800829 | 1.20E-48 | -1.69E-46 |
| MS.gene052379 | MS.gene28961 | 0.870402 | 1.50E-66 | -1.69E-46 |
| MS.gene052421 | MS.gene28961 | 0.825792 | 3.86E-54 | -1.69E-46 |
| MS.gene052484 | MS.gene28961 | 0.822829 | 1.92E-53 | -1.69E-46 |
| MS.gene052485 | MS.gene28961 | 0.813397 | 2.61E-51 | -1.69E-46 |
| MS.gene052486 | MS.gene28961 | 0.802477 | 5.51E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene28961 | 0.859254 | 4.70E-63 | -1.69E-46 |
| MS.gene052870 | MS.gene28961 | 0.817564 | 3.09E-52 | -1.69E-46 |
| MS.gene052872 | MS.gene28961 | 0.817821 | 2.70E-52 | -1.69E-46 |
| MS.gene052916 | MS.gene28961 | 0.843216 | 1.61E-58 | -1.69E-46 |
| MS.gene052966 | MS.gene28961 | 0.807267 | 5.50E-50 | -1.69E-46 |
| MS.gene053009 | MS.gene28961 | 0.871802 | 5.18E-67 | -1.69E-46 |
| MS.gene053103 | MS.gene28961 | 0.812384 | 4.36E-51 | -1.69E-46 |
| MS.gene053104 | MS.gene28961 | 0.838248 | 3.22E-57 | -1.69E-46 |
| MS.gene053207 | MS.gene28961 | 0.848975 | 4.35E-60 | -1.69E-46 |
| MS.gene053213 | MS.gene28961 | 0.894443 | 2.46E-75 | -1.69E-46 |
| MS.gene053286 | MS.gene28961 | 0.888588 | 5.17E-73 | -1.69E-46 |
| MS.gene053322 | MS.gene28961 | 0.89025 | 1.17E-73 | -1.69E-46 |
| MS.gene053384 | MS.gene28961 | 0.817121 | 3.89E-52 | -1.69E-46 |
| MS.gene053436 | MS.gene28961 | 0.814304 | 1.65E-51 | -1.69E-46 |
| MS.gene053449 | MS.gene28961 | 0.810513 | 1.11E-50 | -1.69E-46 |
| MS.gene053574 | MS.gene28961 | 0.845588 | 3.70E-59 | -1.69E-46 |
| MS.gene053632 | MS.gene28961 | 0.859663 | 3.54E-63 | -1.69E-46 |
| MS.gene053813 | MS.gene28961 | 0.893519 | 5.83E-75 | -1.69E-46 |
| MS.gene053824 | MS.gene28961 | 0.812585 | 3.94E-51 | -1.69E-46 |
| MS.gene053916 | MS.gene28961 | 0.831101 | 2.02E-55 | -1.69E-46 |
| MS.gene054376 | MS.gene28961 | 0.883648 | 3.76E-71 | -1.69E-46 |
| MS.gene054408 | MS.gene28961 | 0.805716 | 1.17E-49 | -1.69E-46 |
| MS.gene054595 | MS.gene28961 | 0.828741 | 7.59E-55 | -1.69E-46 |
| MS.gene054600 | MS.gene28961 | 0.867946 | 9.40E-66 | -1.69E-46 |
| MS.gene054642 | MS.gene28961 | 0.89583 | 6.60E-76 | -1.69E-46 |
| MS.gene054802 | MS.gene28961 | 0.859241 | 4.74E-63 | -1.69E-46 |
| MS.gene054803 | MS.gene28961 | 0.85892 | 5.92E-63 | -1.69E-46 |
| MS.gene054804 | MS.gene28961 | 0.862111 | 6.39E-64 | -1.69E-46 |
| MS.gene054954 | MS.gene28961 | 0.86174 | 8.30E-64 | -1.69E-46 |
| MS.gene05505 | MS.gene28961 | 0.848962 | 4.39E-60 | -1.69E-46 |
| MS.gene055154 | MS.gene28961 | -0.803617 | 3.20E-49 | -1.69E-46 |
| MS.gene055206 | MS.gene28961 | 0.845364 | 4.25E-59 | -1.69E-46 |
| MS.gene055212 | MS.gene28961 | 0.818799 | 1.62E-52 | -1.69E-46 |
| MS.gene055254 | MS.gene28961 | 0.830423 | 2.96E-55 | -1.69E-46 |
| MS.gene055362 | MS.gene28961 | 0.878146 | 3.56E-69 | -1.69E-46 |
| MS.gene055397 | MS.gene28961 | 0.90548 | 4.11E-80 | -1.69E-46 |
| MS.gene055412 | MS.gene28961 | 0.826621 | 2.45E-54 | -1.69E-46 |
| MS.gene055499 | MS.gene28961 | 0.883984 | 2.82E-71 | -1.69E-46 |
| MS.gene055502 | MS.gene28961 | 0.866813 | 2.17E-65 | -1.69E-46 |
| MS.gene055577 | MS.gene28961 | 0.813349 | 2.68E-51 | -1.69E-46 |
| MS.gene055634 | MS.gene28961 | 0.815059 | 1.12E-51 | -1.69E-46 |
| MS.gene055636 | MS.gene28961 | 0.887979 | 8.86E-73 | -1.69E-46 |
| MS.gene055638 | MS.gene28961 | 0.881978 | 1.53E-70 | -1.69E-46 |
| MS.gene055647 | MS.gene28961 | 0.920319 | 1.49E-87 | -1.69E-46 |
| MS.gene055722 | MS.gene28961 | 0.888695 | 4.70E-73 | -1.69E-46 |
| MS.gene055750 | MS.gene28961 | 0.804171 | 2.46E-49 | -1.69E-46 |
| MS.gene055802 | MS.gene28961 | 0.806257 | 8.98E-50 | -1.69E-46 |
| MS.gene05592 | MS.gene28961 | 0.884686 | 1.55E-71 | -1.69E-46 |
| MS.gene055941 | MS.gene28961 | 0.858724 | 6.77E-63 | -1.69E-46 |
| MS.gene055956 | MS.gene28961 | -0.819859 | 9.31E-53 | -1.69E-46 |
| MS.gene056083 | MS.gene28961 | 0.828106 | 1.08E-54 | -1.69E-46 |
| MS.gene056191 | MS.gene28961 | 0.844924 | 5.59E-59 | -1.69E-46 |
| MS.gene056374 | MS.gene28961 | 0.904052 | 1.84E-79 | -1.69E-46 |
| MS.gene056410 | MS.gene28961 | 0.81922 | 1.30E-52 | -1.69E-46 |
| MS.gene056422 | MS.gene28961 | 0.807986 | 3.87E-50 | -1.69E-46 |
| MS.gene056449 | MS.gene28961 | 0.823966 | 1.04E-53 | -1.69E-46 |
| MS.gene056504 | MS.gene28961 | 0.811099 | 8.29E-51 | -1.69E-46 |
| MS.gene056510 | MS.gene28961 | 0.847596 | 1.05E-59 | -1.69E-46 |
| MS.gene056549 | MS.gene28961 | 0.848379 | 6.36E-60 | -1.69E-46 |
| MS.gene056609 | MS.gene28961 | 0.825883 | 3.68E-54 | -1.69E-46 |
| MS.gene056657 | MS.gene28961 | 0.9041 | 1.75E-79 | -1.69E-46 |
| MS.gene056692 | MS.gene28961 | 0.807268 | 5.49E-50 | -1.69E-46 |
| MS.gene056897 | MS.gene28961 | 0.815375 | 9.55E-52 | -1.69E-46 |
| MS.gene056942 | MS.gene28961 | 0.821317 | 4.31E-53 | -1.69E-46 |
| MS.gene056946 | MS.gene28961 | 0.81383 | 2.10E-51 | -1.69E-46 |
| MS.gene057011 | MS.gene28961 | 0.832325 | 1.01E-55 | -1.69E-46 |
| MS.gene057076 | MS.gene28961 | 0.845108 | 4.99E-59 | -1.69E-46 |
| MS.gene057129 | MS.gene28961 | 0.908628 | 1.39E-81 | -1.69E-46 |
| MS.gene057146 | MS.gene28961 | 0.842381 | 2.68E-58 | -1.69E-46 |
| MS.gene057285 | MS.gene28961 | 0.836229 | 1.06E-56 | -1.69E-46 |
| MS.gene057295 | MS.gene28961 | 0.811342 | 7.34E-51 | -1.69E-46 |
| MS.gene057331 | MS.gene28961 | 0.872175 | 3.89E-67 | -1.69E-46 |
| MS.gene057416 | MS.gene28961 | 0.896146 | 4.88E-76 | -1.69E-46 |
| MS.gene057775 | MS.gene28961 | 0.811536 | 6.67E-51 | -1.69E-46 |
| MS.gene057831 | MS.gene28961 | 0.827981 | 1.16E-54 | -1.69E-46 |
| MS.gene057926 | MS.gene28961 | 0.828899 | 6.95E-55 | -1.69E-46 |
| MS.gene058019 | MS.gene28961 | 0.875357 | 3.29E-68 | -1.69E-46 |
| MS.gene058130 | MS.gene28961 | 0.804975 | 1.67E-49 | -1.69E-46 |
| MS.gene058293 | MS.gene28961 | 0.829946 | 3.87E-55 | -1.69E-46 |
| MS.gene058323 | MS.gene28961 | 0.827646 | 1.39E-54 | -1.69E-46 |
| MS.gene05837 | MS.gene28961 | 0.803589 | 3.24E-49 | -1.69E-46 |
| MS.gene058419 | MS.gene28961 | 0.903582 | 2.99E-79 | -1.69E-46 |
| MS.gene058459 | MS.gene28961 | 0.809333 | 1.99E-50 | -1.69E-46 |
| MS.gene058544 | MS.gene28961 | 0.829232 | 5.78E-55 | -1.69E-46 |
| MS.gene058660 | MS.gene28961 | 0.827072 | 1.91E-54 | -1.69E-46 |
| MS.gene058723 | MS.gene28961 | 0.849459 | 3.19E-60 | -1.69E-46 |
| MS.gene058773 | MS.gene28961 | 0.852085 | 5.82E-61 | -1.69E-46 |
| MS.gene05883 | MS.gene28961 | 0.81786 | 2.65E-52 | -1.69E-46 |
| MS.gene058903 | MS.gene28961 | 0.86154 | 9.55E-64 | -1.69E-46 |
| MS.gene059022 | MS.gene28961 | 0.874075 | 8.96E-68 | -1.69E-46 |
| MS.gene059023 | MS.gene28961 | 0.827982 | 1.16E-54 | -1.69E-46 |
| MS.gene059029 | MS.gene28961 | 0.876341 | 1.51E-68 | -1.69E-46 |
| MS.gene05913 | MS.gene28961 | 0.824702 | 6.99E-54 | -1.69E-46 |
| MS.gene05934 | MS.gene28961 | 0.823518 | 1.33E-53 | -1.69E-46 |
| MS.gene059367 | MS.gene28961 | 0.808873 | 2.50E-50 | -1.69E-46 |
| MS.gene059455 | MS.gene28961 | 0.809983 | 1.44E-50 | -1.69E-46 |
| MS.gene059536 | MS.gene28961 | 0.857338 | 1.75E-62 | -1.69E-46 |
| MS.gene059676 | MS.gene28961 | 0.810168 | 1.32E-50 | -1.69E-46 |
| MS.gene059677 | MS.gene28961 | 0.883129 | 5.82E-71 | -1.69E-46 |
| MS.gene059688 | MS.gene28961 | 0.820248 | 7.58E-53 | -1.69E-46 |
| MS.gene059692 | MS.gene28961 | 0.822992 | 1.76E-53 | -1.69E-46 |
| MS.gene059695 | MS.gene28961 | 0.828409 | 9.14E-55 | -1.69E-46 |
| MS.gene059711 | MS.gene28961 | 0.849028 | 4.21E-60 | -1.69E-46 |
| MS.gene059718 | MS.gene28961 | 0.856264 | 3.62E-62 | -1.69E-46 |
| MS.gene059756 | MS.gene28961 | 0.846919 | 1.60E-59 | -1.69E-46 |
| MS.gene059858 | MS.gene28961 | 0.839286 | 1.74E-57 | -1.69E-46 |
| MS.gene059865 | MS.gene28961 | 0.821464 | 3.98E-53 | -1.69E-46 |
| MS.gene059902 | MS.gene28961 | 0.85718 | 1.94E-62 | -1.69E-46 |
| MS.gene059960 | MS.gene28961 | 0.89156 | 3.55E-74 | -1.69E-46 |
| MS.gene059974 | MS.gene28961 | 0.827608 | 1.42E-54 | -1.69E-46 |
| MS.gene060005 | MS.gene28961 | 0.821754 | 3.41E-53 | -1.69E-46 |
| MS.gene060193 | MS.gene28961 | 0.855173 | 7.54E-62 | -1.69E-46 |
| MS.gene060341 | MS.gene28961 | 0.814676 | 1.36E-51 | -1.69E-46 |
| MS.gene060356 | MS.gene28961 | 0.839539 | 1.49E-57 | -1.69E-46 |
| MS.gene060482 | MS.gene28961 | 0.813788 | 2.14E-51 | -1.69E-46 |
| MS.gene060703 | MS.gene28961 | 0.828322 | 9.59E-55 | -1.69E-46 |
| MS.gene060727 | MS.gene28961 | 0.844544 | 7.08E-59 | -1.69E-46 |
| MS.gene060728 | MS.gene28961 | 0.832206 | 1.08E-55 | -1.69E-46 |
| MS.gene060762 | MS.gene28961 | 0.809597 | 1.75E-50 | -1.69E-46 |
| MS.gene06077 | MS.gene28961 | 0.827889 | 1.22E-54 | -1.69E-46 |
| MS.gene060804 | MS.gene28961 | 0.851162 | 1.06E-60 | -1.69E-46 |
| MS.gene060818 | MS.gene28961 | 0.857693 | 1.37E-62 | -1.69E-46 |
| MS.gene060835 | MS.gene28961 | 0.816888 | 4.38E-52 | -1.69E-46 |
| MS.gene060837 | MS.gene28961 | 0.829961 | 3.84E-55 | -1.69E-46 |
| MS.gene06092 | MS.gene28961 | 0.821722 | 3.47E-53 | -1.69E-46 |
| MS.gene061041 | MS.gene28961 | 0.823482 | 1.35E-53 | -1.69E-46 |
| MS.gene061134 | MS.gene28961 | 0.845962 | 2.93E-59 | -1.69E-46 |
| MS.gene061150 | MS.gene28961 | 0.867892 | 9.79E-66 | -1.69E-46 |
| MS.gene061171 | MS.gene28961 | 0.851046 | 1.15E-60 | -1.69E-46 |
| MS.gene061200 | MS.gene28961 | 0.927221 | 1.59E-91 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28961.t1 | MTR_4g075333 | 97.674 | 301 | 7 | 0 | 1 | 301 | 1 | 301 | 0.0 | 564 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28961.t1 | AT2G21140 | 42.345 | 307 | 131 | 14 | 1 | 284 | 1 | 284 | 1.86e-42 | 154 |
| MS.gene28961.t1 | AT2G21140 | 49.091 | 165 | 50 | 9 | 301 | 457 | 180 | 318 | 1.35e-11 | 66.2 |
| MS.gene28961.t1 | AT4G38770 | 58.015 | 131 | 46 | 3 | 33 | 162 | 31 | 153 | 3.08e-39 | 148 |
Find 169 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCACCACCCCAAGTATTT+TGG | 0.149326 | 4.4:+34774634 | MS.gene28961:CDS |
| ACAACTGGTGGTTTGTAAAT+TGG | 0.182003 | 4.4:-34774457 | None:intergenic |
| AGATAGGAACAGGAGGAAAA+AGG | 0.279747 | 4.4:-34773838 | None:intergenic |
| ACTACTGGAGGCTTATATAT+TGG | 0.279939 | 4.4:-34774412 | None:intergenic |
| GAAGAGAGGCCAAAAGAATT+TGG | 0.300313 | 4.4:-34773717 | None:intergenic |
| ACCGGTGGTGGTTGTGGCTT+TGG | 0.311135 | 4.4:-34774229 | None:intergenic |
| CTCTTCCATCATCCCAAGTT+TGG | 0.322697 | 4.4:+34774736 | MS.gene28961:CDS |
| TTCTTCCATCACCCAAAGTT+TGG | 0.326013 | 4.4:+34774685 | MS.gene28961:CDS |
| CATGTACCTCCAAATTCTTT+TGG | 0.326491 | 4.4:+34773708 | MS.gene28961:CDS |
| ATTGGAACAACCGGTGGCTT+TGG | 0.327984 | 4.4:-34774439 | None:intergenic |
| GGGTGGTGGAAGAAGCTCTT+TGG | 0.328567 | 4.4:-34774622 | None:intergenic |
| ACTGGAACGGGTGGTAAAAC+TGG | 0.341382 | 4.4:-34774292 | None:intergenic |
| TCCACTAAGTCCTCATAATT+AGG | 0.348252 | 4.4:+34774768 | MS.gene28961:CDS |
| GGTGGTTGTGGCTTTGGAAC+CGG | 0.357210 | 4.4:-34774223 | None:intergenic |
| GTGGCCACTTTCCAAACTTT+GGG | 0.360377 | 4.4:-34774696 | None:intergenic |
| ATCACCCTAAGTATGGAAAA+TGG | 0.363281 | 4.4:+34774587 | MS.gene28961:CDS |
| TGGAAAATCTTTGGTGGAAA+TGG | 0.364399 | 4.4:-34773806 | None:intergenic |
| ATTGGAACAGGTGGTAGAAC+TGG | 0.374309 | 4.4:-34774394 | None:intergenic |
| GGAAAGGGAGGTTTGTAGAT+AGG | 0.379613 | 4.4:-34773887 | None:intergenic |
| AGGGCAAGGTTTCTTGTAGA+TGG | 0.383488 | 4.4:-34773918 | None:intergenic |
| GGTGGCCACTTTCCAAACTT+TGG | 0.388021 | 4.4:-34774697 | None:intergenic |
| CATGGTTTCTTGACCGGAAC+CGG | 0.393305 | 4.4:-34774247 | None:intergenic |
| ACTGGTGGTGGAAGTGCCTT+TGG | 0.394673 | 4.4:-34774334 | None:intergenic |
| CATGGTTTCTTGACTGGAAC+AGG | 0.398406 | 4.4:-34774142 | None:intergenic |
| AAGAGCACAAAAGTGCTCTT+TGG | 0.399281 | 4.4:-34772779 | None:intergenic |
| GGGTGTTTATGGAAAATCTT+TGG | 0.401824 | 4.4:-34773815 | None:intergenic |
| ACCGGAGGAGGTTTGTATAC+TGG | 0.407753 | 4.4:-34774205 | None:intergenic |
| AGAACTGGGTGCTCAATCTT+TGG | 0.407928 | 4.4:-34774379 | None:intergenic |
| GTGGACATGGTTTCTTGATC+GGG | 0.409936 | 4.4:-34774357 | None:intergenic |
| ACCGGTGGAGGTTTGTATAC+TGG | 0.412309 | 4.4:-34774310 | None:intergenic |
| TACCAGCAGCAGCAGTACTT+AGG | 0.413145 | 4.4:-34773664 | None:intergenic |
| ACTGGAGCAGGTGGTGGAAC+TGG | 0.413223 | 4.4:-34774187 | None:intergenic |
| TGCTCAATCTTTGGTGGACA+TGG | 0.421709 | 4.4:-34774370 | None:intergenic |
| GCCACAACCACCACCGGTTC+CGG | 0.423338 | 4.4:+34774234 | MS.gene28961:CDS |
| TAGATAGGAATATGAGGAAA+TGG | 0.423815 | 4.4:-34773872 | None:intergenic |
| TTCTTGATCGGGACTGGTGG+TGG | 0.425402 | 4.4:-34774346 | None:intergenic |
| CAACTACCTCAACTGTACTA+TGG | 0.428844 | 4.4:-34772848 | None:intergenic |
| GGTGGACATGGTTTCTTGAT+CGG | 0.429905 | 4.4:-34774358 | None:intergenic |
| ACAGGTGTAGGTGGAGGAAG+AGG | 0.429970 | 4.4:-34773998 | None:intergenic |
| GGGAGAGGTTTATGGTAAAC+AGG | 0.430983 | 4.4:-34774049 | None:intergenic |
| GGAACTGGATGTTCAACCTT+TGG | 0.432776 | 4.4:-34774172 | None:intergenic |
| AATGGAGGTTTCTTGTAGAT+AGG | 0.434086 | 4.4:-34773854 | None:intergenic |
| GGAAGAGGTTTCTCATAAAC+AGG | 0.436457 | 4.4:-34773983 | None:intergenic |
| GGTGGAAGTGCCTTTGGAAC+CGG | 0.437983 | 4.4:-34774328 | None:intergenic |
| ACAGTTGAGGTAGTTGGGCT+TGG | 0.440510 | 4.4:+34772855 | MS.gene28961:CDS |
| TTGAATGGAGGAAGAACAAC+TGG | 0.443546 | 4.4:-34774472 | None:intergenic |
| GGACATGGTGGTTTCTTGAA+TGG | 0.444236 | 4.4:-34774487 | None:intergenic |
| ACCGGAACCGGTGGTGGTTG+TGG | 0.444913 | 4.4:-34774235 | None:intergenic |
| GGTGGACATGGTTTCTTGAC+TGG | 0.446271 | 4.4:-34774148 | None:intergenic |
| TCATATATAGGCACAGGTGG+AGG | 0.447385 | 4.4:-34773938 | None:intergenic |
| TAGGTGGAGGGAGAGGTTTA+TGG | 0.447625 | 4.4:-34774057 | None:intergenic |
| CATGGTTTCTTGATCGGGAC+TGG | 0.450738 | 4.4:-34774352 | None:intergenic |
| ATGATCCAAACTTGGGATGA+TGG | 0.451150 | 4.4:-34774741 | None:intergenic |
| GGTTTCTTGTAGATAGGAAC+AGG | 0.451221 | 4.4:-34773848 | None:intergenic |
| TGATGGAAGAAGCTCTTATG+AGG | 0.451803 | 4.4:-34774673 | None:intergenic |
| AAGACTAGCCAGGCTTTCTC+AGG | 0.452806 | 4.4:+34772909 | MS.gene28961:CDS |
| ATAGTACAGTTGAGGTAGTT+GGG | 0.453640 | 4.4:+34772850 | MS.gene28961:CDS |
| GGAAGAGGTTTATGATATAC+AGG | 0.458760 | 4.4:-34774115 | None:intergenic |
| AAATCAGGATGAGGATGCTT+AGG | 0.459714 | 4.4:-34773755 | None:intergenic |
| TTCTTGTAGATGGGAATATG+AGG | 0.460426 | 4.4:-34773908 | None:intergenic |
| AAGCTCTTTGGAGGCAGAGT+TGG | 0.461018 | 4.4:-34774517 | None:intergenic |
| ACAGGCACAGGCGGAGGAAG+AGG | 0.461209 | 4.4:-34774031 | None:intergenic |
| CATAGTACAGTTGAGGTAGT+TGG | 0.461236 | 4.4:+34772849 | MS.gene28961:CDS |
| AGTGCCTTTGGAACCGGTGG+AGG | 0.465214 | 4.4:-34774322 | None:intergenic |
| ATCATCCCAAGTTTGGATCA+TGG | 0.467105 | 4.4:+34774743 | MS.gene28961:CDS |
| GGTGGCTTTGGAATTACTAC+TGG | 0.468914 | 4.4:-34774427 | None:intergenic |
| TTCTTGACTGGAACAGGAGG+AGG | 0.469362 | 4.4:-34774136 | None:intergenic |
| ACCTAATTATGAGGACTTAG+TGG | 0.469386 | 4.4:-34774769 | None:intergenic |
| ACAGGTGTAGGAGGAGGGAT+AGG | 0.473148 | 4.4:-34773965 | None:intergenic |
| TGTGGCTTTGGAACCGGAGG+AGG | 0.476133 | 4.4:-34774217 | None:intergenic |
| ACTGGAACAGGAGGAGGAAG+AGG | 0.480945 | 4.4:-34774130 | None:intergenic |
| GGAGGCTTATATATTGGAAC+AGG | 0.482206 | 4.4:-34774406 | None:intergenic |
| ACCAGCAGCAGCAGTACTTA+GGG | 0.485236 | 4.4:-34773663 | None:intergenic |
| TTCCAAAATACTTGGGGTGG+TGG | 0.485411 | 4.4:-34774636 | None:intergenic |
| TGGAGGCCATGATCCAAACT+TGG | 0.487208 | 4.4:-34774749 | None:intergenic |
| TAGATGGGAATATGAGGAAA+GGG | 0.489468 | 4.4:-34773902 | None:intergenic |
| GCACCTTGTCCTGCTCATGA+TGG | 0.491575 | 4.4:+34773590 | MS.gene28961:CDS |
| AAAACTGGATGCTCAACCTT+TGG | 0.492655 | 4.4:-34774277 | None:intergenic |
| GGAGGTTTGTATACTGGAAC+GGG | 0.495970 | 4.4:-34774304 | None:intergenic |
| TCAACCTTTGGTGGTGGACA+TGG | 0.497538 | 4.4:-34774265 | None:intergenic |
| AAAAGAGCCACCTAATTATG+AGG | 0.498709 | 4.4:-34774778 | None:intergenic |
| TCAACCTTTGGTGGTGGACA+TGG | 0.500021 | 4.4:-34774160 | None:intergenic |
| GGTGGACATGGTTTCTTGAC+CGG | 0.505845 | 4.4:-34774253 | None:intergenic |
| CCTCAAGAAATTGTAAAAGA+AGG | 0.509177 | 4.4:+34773521 | MS.gene28961:CDS |
| AAGAAGCTCTTATGAGGGAT+TGG | 0.509685 | 4.4:-34774667 | None:intergenic |
| GGTTTGTAGATAGGAATATG+AGG | 0.511489 | 4.4:-34773878 | None:intergenic |
| ATTGACTGCAAAGAAGCAAA+TGG | 0.512954 | 4.4:+34773437 | MS.gene28961:CDS |
| ACAAAGTACCTGAGAAAGCC+TGG | 0.513034 | 4.4:-34772917 | None:intergenic |
| TTCTTGACCGGAACCGGTGG+TGG | 0.513178 | 4.4:-34774241 | None:intergenic |
| GGAAGAGGTTTCTCATACAC+AGG | 0.514773 | 4.4:-34774082 | None:intergenic |
| GAACAATATTAAGACTAGCC+AGG | 0.519758 | 4.4:+34772899 | MS.gene28961:CDS |
| TGGTGGAAGAAGCTCTTTGG+AGG | 0.520821 | 4.4:-34774619 | None:intergenic |
| GGAGGTTTGTATACTGGAGC+AGG | 0.522258 | 4.4:-34774199 | None:intergenic |
| AAGAAGCTCTTTGGAGGCAA+TGG | 0.524273 | 4.4:-34774613 | None:intergenic |
| TCCAGTATACAAACCTCCTC+CGG | 0.524551 | 4.4:+34774204 | MS.gene28961:CDS |
| GGGCAAGGTTTCTTGTAGAT+GGG | 0.525451 | 4.4:-34773917 | None:intergenic |
| ACTTTCCAAACTTTGGGTGA+TGG | 0.525688 | 4.4:-34774690 | None:intergenic |
| GGAAGAGGTTTCTCATAGAC+AGG | 0.529446 | 4.4:-34774016 | None:intergenic |
| TCATAAACAGGTGTAGGAGG+AGG | 0.529472 | 4.4:-34773971 | None:intergenic |
| TTGTATACTGGAGCAGGTGG+TGG | 0.530491 | 4.4:-34774193 | None:intergenic |
| ATCACCCAAAGTTTGGAAAG+TGG | 0.535768 | 4.4:+34774692 | MS.gene28961:CDS |
| GGCTTTGGAATTACTACTGG+AGG | 0.536776 | 4.4:-34774424 | None:intergenic |
| TGGAGGTTTGTATACTGGAA+CGG | 0.538317 | 4.4:-34774305 | None:intergenic |
| GGTTTGTAAATTGGAACAAC+CGG | 0.540910 | 4.4:-34774448 | None:intergenic |
| ACTGGATGTTCAACCTTTGG+TGG | 0.542345 | 4.4:-34774169 | None:intergenic |
| TTCTCATAAACAGGTGTAGG+AGG | 0.543447 | 4.4:-34773974 | None:intergenic |
| ACTGGGTGCTCAATCTTTGG+TGG | 0.543549 | 4.4:-34774376 | None:intergenic |
| TCCAAAGCCACAACCACCAC+CGG | 0.544433 | 4.4:+34774228 | MS.gene28961:CDS |
| ACAGGCGTAGGTGGAGGAAG+AGG | 0.545913 | 4.4:-34774097 | None:intergenic |
| TGTTTATGGAAAATCTTTGG+TGG | 0.546720 | 4.4:-34773812 | None:intergenic |
| GGCTTATATATTGGAACAGG+TGG | 0.547652 | 4.4:-34774403 | None:intergenic |
| GGTTTCTCATAAACAGGTGT+AGG | 0.548606 | 4.4:-34773977 | None:intergenic |
| ATAGGCACAGGTGGAGGGCA+AGG | 0.548824 | 4.4:-34773932 | None:intergenic |
| AAAATCTTTGGTGGAAATGG+TGG | 0.550630 | 4.4:-34773803 | None:intergenic |
| CAAACTTGGGATGATGGAAG+AGG | 0.551419 | 4.4:-34774735 | None:intergenic |
| ACAGGTGTAGGTGGAGGGAG+AGG | 0.551926 | 4.4:-34774064 | None:intergenic |
| TGATATACAGGCGTAGGTGG+AGG | 0.552048 | 4.4:-34774103 | None:intergenic |
| GTAGATGGGAATATGAGGAA+AGG | 0.552981 | 4.4:-34773903 | None:intergenic |
| TCATACACAGGTGTAGGTGG+AGG | 0.556428 | 4.4:-34774070 | None:intergenic |
| TGGTAAACAGGCACAGGCGG+AGG | 0.557803 | 4.4:-34774037 | None:intergenic |
| AAGCTCTTATGAGGGATTGG+TGG | 0.558802 | 4.4:-34774664 | None:intergenic |
| ATGGGAATATGAGGAAAGGG+AGG | 0.558873 | 4.4:-34773899 | None:intergenic |
| GGTTTATGGTAAACAGGCAC+AGG | 0.560487 | 4.4:-34774043 | None:intergenic |
| CATATATAGGCACAGGTGGA+GGG | 0.562809 | 4.4:-34773937 | None:intergenic |
| ACCCTAAGTACTGCTGCTGC+TGG | 0.563864 | 4.4:+34773662 | MS.gene28961:CDS |
| GGTTTATGATATACAGGCGT+AGG | 0.567260 | 4.4:-34774109 | None:intergenic |
| GGAGGCAGAGTTGGAAGAGG+TGG | 0.568083 | 4.4:-34774508 | None:intergenic |
| GGATGCTCAACCTTTGGTGG+TGG | 0.571275 | 4.4:-34774271 | None:intergenic |
| TTCTCATAGACAGGTGTAGG+TGG | 0.573276 | 4.4:-34774007 | None:intergenic |
| AAGCTCTTTGGAGGCAATGG+AGG | 0.573741 | 4.4:-34774610 | None:intergenic |
| TTCTCATACACAGGTGTAGG+TGG | 0.574160 | 4.4:-34774073 | None:intergenic |
| ACTGGATGCTCAACCTTTGG+TGG | 0.575483 | 4.4:-34774274 | None:intergenic |
| GGTTTCTCATAGACAGGTGT+AGG | 0.575587 | 4.4:-34774010 | None:intergenic |
| TCATAGACAGGTGTAGGTGG+AGG | 0.577698 | 4.4:-34774004 | None:intergenic |
| AATTGAGGTAAATCAGGATG+AGG | 0.587264 | 4.4:-34773764 | None:intergenic |
| TTTGGAGGCAGAGTTGGAAG+AGG | 0.589114 | 4.4:-34774511 | None:intergenic |
| GGAAGTGCCTTTGGAACCGG+TGG | 0.589459 | 4.4:-34774325 | None:intergenic |
| TTATGATATACAGGCGTAGG+TGG | 0.589531 | 4.4:-34774106 | None:intergenic |
| TCCAGTATACAAACCTCCAC+CGG | 0.590695 | 4.4:+34774309 | MS.gene28961:CDS |
| GGTTTCTCATACACAGGTGT+AGG | 0.592215 | 4.4:-34774076 | None:intergenic |
| GGATGTTCAACCTTTGGTGG+TGG | 0.593017 | 4.4:-34774166 | None:intergenic |
| CATAAACAGGTGTAGGAGGA+GGG | 0.593725 | 4.4:-34773970 | None:intergenic |
| CAAACCTCCACCGGTTCCAA+AGG | 0.595650 | 4.4:+34774318 | MS.gene28961:CDS |
| GAAACCATGTCCACCACCAA+AGG | 0.604111 | 4.4:+34774156 | MS.gene28961:CDS |
| GAAACCATGTCCACCACCAA+AGG | 0.604111 | 4.4:+34774261 | MS.gene28961:CDS |
| GAGAGGCCAAAAGAATTTGG+AGG | 0.605203 | 4.4:-34773714 | None:intergenic |
| GGTTTCTTGATCGGGACTGG+TGG | 0.605416 | 4.4:-34774349 | None:intergenic |
| TTGGAACAGGTGGTAGAACT+GGG | 0.608093 | 4.4:-34774393 | None:intergenic |
| AGAGTTGGAAGAGGTGGACA+TGG | 0.609427 | 4.4:-34774502 | None:intergenic |
| GGTTTCTTGACCGGAACCGG+TGG | 0.610970 | 4.4:-34774244 | None:intergenic |
| AGTAGTAATTCCAAAGCCAC+CGG | 0.613019 | 4.4:+34774429 | MS.gene28961:CDS |
| AAAAGAGGATGTTTGAAGAG+AGG | 0.615228 | 4.4:-34773731 | None:intergenic |
| GGAGGCCATGATCCAAACTT+GGG | 0.615871 | 4.4:-34774748 | None:intergenic |
| ATAGGAATATGAGGAAATGG+AGG | 0.616115 | 4.4:-34773869 | None:intergenic |
| CATACACAGGTGTAGGTGGA+GGG | 0.625803 | 4.4:-34774069 | None:intergenic |
| TTCTTGTAGATAGGAACAGG+AGG | 0.631040 | 4.4:-34773845 | None:intergenic |
| AGGCCATCATGAGCAGGACA+AGG | 0.637081 | 4.4:-34773593 | None:intergenic |
| TTGTAAATTGGAACAACCGG+TGG | 0.639441 | 4.4:-34774445 | None:intergenic |
| GTTGGAAGAGGTGGACATGG+TGG | 0.641805 | 4.4:-34774499 | None:intergenic |
| GGTTGTGGCTTTGGAACCGG+AGG | 0.643174 | 4.4:-34774220 | None:intergenic |
| GGTTTGTATACTGGAGCAGG+TGG | 0.652100 | 4.4:-34774196 | None:intergenic |
| TTATGGTAAACAGGCACAGG+CGG | 0.653317 | 4.4:-34774040 | None:intergenic |
| TGGAGACCATAGTACAGTTG+AGG | 0.656125 | 4.4:+34772842 | MS.gene28961:CDS |
| GGTTTCTTGACTGGAACAGG+AGG | 0.656712 | 4.4:-34774139 | None:intergenic |
| CATGGTGGTTTCTTGAATGG+AGG | 0.661048 | 4.4:-34774484 | None:intergenic |
| GATGGAAGAAGCTCTTATGA+GGG | 0.661558 | 4.4:-34774672 | None:intergenic |
| AATGGAGGAAGAACAACTGG+TGG | 0.671156 | 4.4:-34774469 | None:intergenic |
| TAATTATGAGGACTTAGTGG+AGG | 0.686242 | 4.4:-34774766 | None:intergenic |
| GGTTTGTATACTGGAACGGG+TGG | 0.692269 | 4.4:-34774301 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATCAAAAAAAATGTTT+TGG | + | chr4.4:34772976-34772995 | MS.gene28961:intron | 10.0% |
| !! | ATCAAGTATCTCTAAATATT+AGG | + | chr4.4:34773108-34773127 | MS.gene28961:intron | 20.0% |
| !! | TCTCTTTGTAACAAAATATA+AGG | - | chr4.4:34773351-34773370 | None:intergenic | 20.0% |
| !!! | TTGTTTATATTTTGTTAGAG+AGG | - | chr4.4:34773277-34773296 | None:intergenic | 20.0% |
| ! | AACTATGAGTATCAAATTCA+TGG | - | chr4.4:34773228-34773247 | None:intergenic | 25.0% |
| ! | CTTGATAAAAGTGATATAGT+AGG | - | chr4.4:34773094-34773113 | None:intergenic | 25.0% |
| ! | TTTCTTTGGTTAAAAAGAAG+AGG | - | chr4.4:34773024-34773043 | None:intergenic | 25.0% |
| !! | TTTTACAATTTCTTGAGGAA+GGG | - | chr4.4:34773519-34773538 | None:intergenic | 25.0% |
| !!! | AATGGACATTTTAAAACAAG+AGG | + | chr4.4:34773455-34773474 | MS.gene28961:CDS | 25.0% |
| !!! | ATGGACATTTTAAAACAAGA+GGG | + | chr4.4:34773456-34773475 | MS.gene28961:CDS | 25.0% |
| !!! | TTGTGCATAATTTTTTTGCA+GGG | + | chr4.4:34773402-34773421 | MS.gene28961:intron | 25.0% |
| !!! | TTTTGACTTGATGACAATTT+TGG | - | chr4.4:34773627-34773646 | None:intergenic | 25.0% |
| CCTCAAGAAATTGTAAAAGA+AGG | + | chr4.4:34773521-34773540 | MS.gene28961:CDS | 30.0% | |
| GACTTATGGAAGAATTTCTT+TGG | - | chr4.4:34773038-34773057 | None:intergenic | 30.0% | |
| GGATCTAGTTATTATAGCAT+AGG | - | chr4.4:34773207-34773226 | None:intergenic | 30.0% | |
| TAGATAGGAATATGAGGAAA+TGG | - | chr4.4:34773875-34773894 | None:intergenic | 30.0% | |
| TATTAGGTGAAGACATAAAG+TGG | + | chr4.4:34773124-34773143 | MS.gene28961:intron | 30.0% | |
| TGTTTATGGAAAATCTTTGG+TGG | - | chr4.4:34773815-34773834 | None:intergenic | 30.0% | |
| ! | AAATGGTGGAAAAACTTTAG+GGG | - | chr4.4:34773792-34773811 | None:intergenic | 30.0% |
| ! | AAGAGGCTTTTTGGATTAAT+TGG | - | chr4.4:34774721-34774740 | None:intergenic | 30.0% |
| ! | ACAAAAGAAGTACATGTATG+TGG | + | chr4.4:34773293-34773312 | MS.gene28961:intron | 30.0% |
| ! | CCTTCTTTTACAATTTCTTG+AGG | - | chr4.4:34773524-34773543 | None:intergenic | 30.0% |
| ! | CTTTTACAATTTCTTGAGGA+AGG | - | chr4.4:34773520-34773539 | None:intergenic | 30.0% |
| ! | GAAATGGTGGAAAAACTTTA+GGG | - | chr4.4:34773793-34773812 | None:intergenic | 30.0% |
| ! | GGGATAGGTTTTTCATATAT+AGG | - | chr4.4:34773953-34773972 | None:intergenic | 30.0% |
| !! | AGTAACTTGTTTGAAAAGTG+TGG | + | chr4.4:34773166-34773185 | MS.gene28961:intron | 30.0% |
| !! | TTTGTTGTCTTTTTGGTACT+AGG | + | chr4.4:34772807-34772826 | MS.gene28961:CDS | 30.0% |
| !!! | CTTGTGCATAATTTTTTTGC+AGG | + | chr4.4:34773401-34773420 | MS.gene28961:intron | 30.0% |
| !!! | TGGACATTTTAAAACAAGAG+GGG | + | chr4.4:34773457-34773476 | MS.gene28961:CDS | 30.0% |
| AAAAGAGGATGTTTGAAGAG+AGG | - | chr4.4:34773734-34773753 | None:intergenic | 35.0% | |
| AAAATCTTTGGTGGAAATGG+TGG | - | chr4.4:34773806-34773825 | None:intergenic | 35.0% | |
| AATGGAGGTTTCTTGTAGAT+AGG | - | chr4.4:34773857-34773876 | None:intergenic | 35.0% | |
| AATTGAGGTAAATCAGGATG+AGG | - | chr4.4:34773767-34773786 | None:intergenic | 35.0% | |
| ACTACTGGAGGCTTATATAT+TGG | - | chr4.4:34774415-34774434 | None:intergenic | 35.0% | |
| ATAGGAATATGAGGAAATGG+AGG | - | chr4.4:34773872-34773891 | None:intergenic | 35.0% | |
| ATAGTACAGTTGAGGTAGTT+GGG | + | chr4.4:34772850-34772869 | MS.gene28961:CDS | 35.0% | |
| ATCACCCTAAGTATGGAAAA+TGG | + | chr4.4:34774587-34774606 | MS.gene28961:CDS | 35.0% | |
| ATTGACTGCAAAGAAGCAAA+TGG | + | chr4.4:34773437-34773456 | MS.gene28961:CDS | 35.0% | |
| GGAAGAGGTTTATGATATAC+AGG | - | chr4.4:34774118-34774137 | None:intergenic | 35.0% | |
| GGGTGTTTATGGAAAATCTT+TGG | - | chr4.4:34773818-34773837 | None:intergenic | 35.0% | |
| GGTTTGTAAATTGGAACAAC+CGG | - | chr4.4:34774451-34774470 | None:intergenic | 35.0% | |
| GGTTTGTAGATAGGAATATG+AGG | - | chr4.4:34773881-34773900 | None:intergenic | 35.0% | |
| TAATTATGAGGACTTAGTGG+AGG | - | chr4.4:34774769-34774788 | None:intergenic | 35.0% | |
| TAGATGGGAATATGAGGAAA+GGG | - | chr4.4:34773905-34773924 | None:intergenic | 35.0% | |
| TCCACACTTCAAATGACTTA+TGG | - | chr4.4:34773052-34773071 | None:intergenic | 35.0% | |
| TGGAAAATCTTTGGTGGAAA+TGG | - | chr4.4:34773809-34773828 | None:intergenic | 35.0% | |
| TTCTTGTAGATGGGAATATG+AGG | - | chr4.4:34773911-34773930 | None:intergenic | 35.0% | |
| ! | AATGGTGGAAAAACTTTAGG+GGG | - | chr4.4:34773791-34773810 | None:intergenic | 35.0% |
| ! | ACAACTGGTGGTTTGTAAAT+TGG | - | chr4.4:34774460-34774479 | None:intergenic | 35.0% |
| ! | AGGCTTTTTGGATTAATTGG+TGG | - | chr4.4:34774718-34774737 | None:intergenic | 35.0% |
| ! | ATTTTCCAAAATACTTGGGG+TGG | - | chr4.4:34774642-34774661 | None:intergenic | 35.0% |
| ! | ATTTTCCATACTTAGGGTGA+TGG | - | chr4.4:34774588-34774607 | None:intergenic | 35.0% |
| ! | CATGTACCTCCAAATTCTTT+TGG | + | chr4.4:34773708-34773727 | MS.gene28961:CDS | 35.0% |
| ! | GAACAATATTAAGACTAGCC+AGG | + | chr4.4:34772899-34772918 | MS.gene28961:CDS | 35.0% |
| ! | GGAAATGGTGGAAAAACTTT+AGG | - | chr4.4:34773794-34773813 | None:intergenic | 35.0% |
| ! | GGTTTTTCATATATAGGCAC+AGG | - | chr4.4:34773947-34773966 | None:intergenic | 35.0% |
| ! | TCCATAAGTCATTTGAAGTG+TGG | + | chr4.4:34773048-34773067 | MS.gene28961:intron | 35.0% |
| ! | TGGACAGATGATAATGCATA+GGG | + | chr4.4:34773068-34773087 | MS.gene28961:intron | 35.0% |
| ! | TTGGTACTAGGTTTTTGCTA+TGG | + | chr4.4:34772819-34772838 | MS.gene28961:CDS | 35.0% |
| ! | TTTTCATATATAGGCACAGG+TGG | - | chr4.4:34773944-34773963 | None:intergenic | 35.0% |
| ! | TTTTTCCATCACCCTAAGTA+TGG | + | chr4.4:34774580-34774599 | MS.gene28961:CDS | 35.0% |
| !! | ACCCCAAGTATTTTGGAAAA+TGG | + | chr4.4:34774641-34774660 | MS.gene28961:CDS | 35.0% |
| !! | GCCATTTTCCAAAATACTTG+GGG | - | chr4.4:34774645-34774664 | None:intergenic | 35.0% |
| !! | GGCCATTTTCCAAAATACTT+GGG | - | chr4.4:34774646-34774665 | None:intergenic | 35.0% |
| !! | TGGCCATTTTCCAAAATACT+TGG | - | chr4.4:34774647-34774666 | None:intergenic | 35.0% |
| !!! | TGACAATTTTGGTGTTTTGC+AGG | - | chr4.4:34773616-34773635 | None:intergenic | 35.0% |
| !!! | TTGGCTGTTTGTTGTCTTTT+TGG | + | chr4.4:34772800-34772819 | MS.gene28961:CDS | 35.0% |
| AAAACTGGATGCTCAACCTT+TGG | - | chr4.4:34774280-34774299 | None:intergenic | 40.0% | |
| AAATCAGGATGAGGATGCTT+AGG | - | chr4.4:34773758-34773777 | None:intergenic | 40.0% | |
| AAGAAGCTCTTATGAGGGAT+TGG | - | chr4.4:34774670-34774689 | None:intergenic | 40.0% | |
| ACTTTCCAAACTTTGGGTGA+TGG | - | chr4.4:34774693-34774712 | None:intergenic | 40.0% | |
| AGATAGGAACAGGAGGAAAA+AGG | - | chr4.4:34773841-34773860 | None:intergenic | 40.0% | |
| AGTAGTAATTCCAAAGCCAC+CGG | + | chr4.4:34774429-34774448 | MS.gene28961:CDS | 40.0% | |
| ATAGGAACAGGAGGAAAAAG+GGG | - | chr4.4:34773839-34773858 | None:intergenic | 40.0% | |
| ATCACCCAAAGTTTGGAAAG+TGG | + | chr4.4:34774692-34774711 | MS.gene28961:CDS | 40.0% | |
| ATCATCCCAAGTTTGGATCA+TGG | + | chr4.4:34774743-34774762 | MS.gene28961:CDS | 40.0% | |
| ATGATCCAAACTTGGGATGA+TGG | - | chr4.4:34774744-34774763 | None:intergenic | 40.0% | |
| CAACTACCTCAACTGTACTA+TGG | - | chr4.4:34772851-34772870 | None:intergenic | 40.0% | |
| CATAGTACAGTTGAGGTAGT+TGG | + | chr4.4:34772849-34772868 | MS.gene28961:CDS | 40.0% | |
| GAAGAGAGGCCAAAAGAATT+TGG | - | chr4.4:34773720-34773739 | None:intergenic | 40.0% | |
| GATAGGAACAGGAGGAAAAA+GGG | - | chr4.4:34773840-34773859 | None:intergenic | 40.0% | |
| GATGGAAGAAGCTCTTATGA+GGG | - | chr4.4:34774675-34774694 | None:intergenic | 40.0% | |
| GCAGGTGAGCTTGATAAAAA+AGG | + | chr4.4:34773479-34773498 | MS.gene28961:CDS | 40.0% | |
| GGAAGAGGTTTCTCATAAAC+AGG | - | chr4.4:34773986-34774005 | None:intergenic | 40.0% | |
| GGAGGCTTATATATTGGAAC+AGG | - | chr4.4:34774409-34774428 | None:intergenic | 40.0% | |
| GGCTTATATATTGGAACAGG+TGG | - | chr4.4:34774406-34774425 | None:intergenic | 40.0% | |
| GGTTTATGATATACAGGCGT+AGG | - | chr4.4:34774112-34774131 | None:intergenic | 40.0% | |
| GGTTTCTCATAAACAGGTGT+AGG | - | chr4.4:34773980-34773999 | None:intergenic | 40.0% | |
| GGTTTCTTGTAGATAGGAAC+AGG | - | chr4.4:34773851-34773870 | None:intergenic | 40.0% | |
| GTAGATGGGAATATGAGGAA+AGG | - | chr4.4:34773906-34773925 | None:intergenic | 40.0% | |
| TGAGGATGCTTAGGAAAAAG+AGG | - | chr4.4:34773749-34773768 | None:intergenic | 40.0% | |
| TGATGGAAAAAGCTCTTTGG+AGG | - | chr4.4:34774529-34774548 | None:intergenic | 40.0% | |
| TGATGGAAGAAGCTCTTATG+AGG | - | chr4.4:34774676-34774695 | None:intergenic | 40.0% | |
| TGGAGGTTTGTATACTGGAA+CGG | - | chr4.4:34774308-34774327 | None:intergenic | 40.0% | |
| TTATGATATACAGGCGTAGG+TGG | - | chr4.4:34774109-34774128 | None:intergenic | 40.0% | |
| TTCTCATAAACAGGTGTAGG+AGG | - | chr4.4:34773977-34773996 | None:intergenic | 40.0% | |
| TTCTTCCATCACCCAAAGTT+TGG | + | chr4.4:34774685-34774704 | MS.gene28961:CDS | 40.0% | |
| TTCTTGTAGATAGGAACAGG+AGG | - | chr4.4:34773848-34773867 | None:intergenic | 40.0% | |
| TTGAATGGAGGAAGAACAAC+TGG | - | chr4.4:34774475-34774494 | None:intergenic | 40.0% | |
| TTGTAAATTGGAACAACCGG+TGG | - | chr4.4:34774448-34774467 | None:intergenic | 40.0% | |
| ! | AAAACTTTAGGGGGGAATTG+AGG | - | chr4.4:34773782-34773801 | None:intergenic | 40.0% |
| ! | ATGGTGGAAAAACTTTAGGG+GGG | - | chr4.4:34773790-34773809 | None:intergenic | 40.0% |
| ! | ATTTTCCAAACTTGGGGTGA+TGG | - | chr4.4:34774546-34774565 | None:intergenic | 40.0% |
| ! | GAGGCAATTTTCCAAACTTG+GGG | - | chr4.4:34774552-34774571 | None:intergenic | 40.0% |
| ! | GGAGGCAATTTTCCAAACTT+GGG | - | chr4.4:34774553-34774572 | None:intergenic | 40.0% |
| ! | GTGGACAGATGATAATGCAT+AGG | + | chr4.4:34773067-34773086 | MS.gene28961:intron | 40.0% |
| ! | TGGAGGCAATTTTCCAAACT+TGG | - | chr4.4:34774554-34774573 | None:intergenic | 40.0% |
| ! | TTTTTCCATCACCCCAAGTT+TGG | + | chr4.4:34774538-34774557 | MS.gene28961:CDS | 40.0% |
| !! | AAGAGCACAAAAGTGCTCTT+TGG | - | chr4.4:34772782-34772801 | None:intergenic | 40.0% |
| !! | GAGGCCATTTTCCATACTTA+GGG | - | chr4.4:34774594-34774613 | None:intergenic | 40.0% |
| !! | GTACTAGGTTTTTGCTATGG+TGG | + | chr4.4:34772822-34772841 | MS.gene28961:CDS | 40.0% |
| !!! | AAAGAGCACTTTTGTGCTCT+TGG | + | chr4.4:34772781-34772800 | MS.gene28961:CDS | 40.0% |
| !!! | CATTTTAAAACAAGAGGGGC+AGG | + | chr4.4:34773461-34773480 | MS.gene28961:CDS | 40.0% |
| AAGCTCTTATGAGGGATTGG+TGG | - | chr4.4:34774667-34774686 | None:intergenic | 45.0% | |
| AATGGAGGAAGAACAACTGG+TGG | - | chr4.4:34774472-34774491 | None:intergenic | 45.0% | |
| ACTGGATGTTCAACCTTTGG+TGG | - | chr4.4:34774172-34774191 | None:intergenic | 45.0% | |
| AGAACTGGGTGCTCAATCTT+TGG | - | chr4.4:34774382-34774401 | None:intergenic | 45.0% | |
| AGGGCAAGGTTTCTTGTAGA+TGG | - | chr4.4:34773921-34773940 | None:intergenic | 45.0% | |
| ATGGGAATATGAGGAAAGGG+AGG | - | chr4.4:34773902-34773921 | None:intergenic | 45.0% | |
| ATTGGAACAGGTGGTAGAAC+TGG | - | chr4.4:34774397-34774416 | None:intergenic | 45.0% | |
| CATAAACAGGTGTAGGAGGA+GGG | - | chr4.4:34773973-34773992 | None:intergenic | 45.0% | |
| CATATATAGGCACAGGTGGA+GGG | - | chr4.4:34773940-34773959 | None:intergenic | 45.0% | |
| CATGGTGGTTTCTTGAATGG+AGG | - | chr4.4:34774487-34774506 | None:intergenic | 45.0% | |
| CATGGTTTCTTGACTGGAAC+AGG | - | chr4.4:34774145-34774164 | None:intergenic | 45.0% | |
| CTCTTCCATCATCCCAAGTT+TGG | + | chr4.4:34774736-34774755 | MS.gene28961:CDS | 45.0% | |
| GAGAGGCCAAAAGAATTTGG+AGG | - | chr4.4:34773717-34773736 | None:intergenic | 45.0% | |
| GGAAAGGGAGGTTTGTAGAT+AGG | - | chr4.4:34773890-34773909 | None:intergenic | 45.0% | |
| GGAACTGGATGTTCAACCTT+TGG | - | chr4.4:34774175-34774194 | None:intergenic | 45.0% | |
| GGAAGAGGTTTCTCATACAC+AGG | - | chr4.4:34774085-34774104 | None:intergenic | 45.0% | |
| GGAAGAGGTTTCTCATAGAC+AGG | - | chr4.4:34774019-34774038 | None:intergenic | 45.0% | |
| GGACATGGTGGTTTCTTGAA+TGG | - | chr4.4:34774490-34774509 | None:intergenic | 45.0% | |
| GGAGGTTTGTATACTGGAAC+GGG | - | chr4.4:34774307-34774326 | None:intergenic | 45.0% | |
| GGGAGAGGTTTATGGTAAAC+AGG | - | chr4.4:34774052-34774071 | None:intergenic | 45.0% | |
| GGGCAAGGTTTCTTGTAGAT+GGG | - | chr4.4:34773920-34773939 | None:intergenic | 45.0% | |
| GGTGGACATGGTTTCTTGAT+CGG | - | chr4.4:34774361-34774380 | None:intergenic | 45.0% | |
| GGTTTATGGTAAACAGGCAC+AGG | - | chr4.4:34774046-34774065 | None:intergenic | 45.0% | |
| GGTTTCTCATACACAGGTGT+AGG | - | chr4.4:34774079-34774098 | None:intergenic | 45.0% | |
| GGTTTCTCATAGACAGGTGT+AGG | - | chr4.4:34774013-34774032 | None:intergenic | 45.0% | |
| GTGGACATGGTTTCTTGATC+GGG | - | chr4.4:34774360-34774379 | None:intergenic | 45.0% | |
| TAGGAACAGGAGGAAAAAGG+GGG | - | chr4.4:34773838-34773857 | None:intergenic | 45.0% | |
| TCATAAACAGGTGTAGGAGG+AGG | - | chr4.4:34773974-34773993 | None:intergenic | 45.0% | |
| TCATATATAGGCACAGGTGG+AGG | - | chr4.4:34773941-34773960 | None:intergenic | 45.0% | |
| TCCAGTATACAAACCTCCAC+CGG | + | chr4.4:34774309-34774328 | MS.gene28961:CDS | 45.0% | |
| TCCAGTATACAAACCTCCTC+CGG | + | chr4.4:34774204-34774223 | MS.gene28961:CDS | 45.0% | |
| TGGAGACCATAGTACAGTTG+AGG | + | chr4.4:34772842-34772861 | MS.gene28961:CDS | 45.0% | |
| TTATGGTAAACAGGCACAGG+CGG | - | chr4.4:34774043-34774062 | None:intergenic | 45.0% | |
| TTCCAAAATACTTGGGGTGG+TGG | - | chr4.4:34774639-34774658 | None:intergenic | 45.0% | |
| TTCTCATACACAGGTGTAGG+TGG | - | chr4.4:34774076-34774095 | None:intergenic | 45.0% | |
| TTCTCATAGACAGGTGTAGG+TGG | - | chr4.4:34774010-34774029 | None:intergenic | 45.0% | |
| TTGGAACAGGTGGTAGAACT+GGG | - | chr4.4:34774396-34774415 | None:intergenic | 45.0% | |
| ! | AAGAAGCTCTTTGGAGGCAA+TGG | - | chr4.4:34774616-34774635 | None:intergenic | 45.0% |
| ! | ACAAAGTACCTGAGAAAGCC+TGG | - | chr4.4:34772920-34772939 | None:intergenic | 45.0% |
| ! | GTGGCCACTTTCCAAACTTT+GGG | - | chr4.4:34774699-34774718 | None:intergenic | 45.0% |
| ! | TGCTCAATCTTTGGTGGACA+TGG | - | chr4.4:34774373-34774392 | None:intergenic | 45.0% |
| ! | TTCCACCACCCCAAGTATTT+TGG | + | chr4.4:34774634-34774653 | MS.gene28961:CDS | 45.0% |
| !! | CAAACTTGGGATGATGGAAG+AGG | - | chr4.4:34774738-34774757 | None:intergenic | 45.0% |
| !! | GAGGAAAAAGGGGGTGTTTA+TGG | - | chr4.4:34773829-34773848 | None:intergenic | 45.0% |
| !! | GGAGGCCATTTTCCATACTT+AGG | - | chr4.4:34774595-34774614 | None:intergenic | 45.0% |
| !! | GGCTTTGGAATTACTACTGG+AGG | - | chr4.4:34774427-34774446 | None:intergenic | 45.0% |
| !! | GGGTGATGGAAAAAGCTCTT+TGG | - | chr4.4:34774532-34774551 | None:intergenic | 45.0% |
| !! | GGTGGCTTTGGAATTACTAC+TGG | - | chr4.4:34774430-34774449 | None:intergenic | 45.0% |
| !!! | GGATGATGGAAGAGGCTTTT+TGG | - | chr4.4:34774730-34774749 | None:intergenic | 45.0% |
| ACAGTTGAGGTAGTTGGGCT+TGG | + | chr4.4:34772855-34772874 | MS.gene28961:CDS | 50.0% | |
| ACCAGCAGCAGCAGTACTTA+GGG | - | chr4.4:34773666-34773685 | None:intergenic | 50.0% | |
| ACCGGAGGAGGTTTGTATAC+TGG | - | chr4.4:34774208-34774227 | None:intergenic | 50.0% | |
| ACCGGTGGAGGTTTGTATAC+TGG | - | chr4.4:34774313-34774332 | None:intergenic | 50.0% | |
| ACTGGAACGGGTGGTAAAAC+TGG | - | chr4.4:34774295-34774314 | None:intergenic | 50.0% | |
| ACTGGATGCTCAACCTTTGG+TGG | - | chr4.4:34774277-34774296 | None:intergenic | 50.0% | |
| ACTGGGTGCTCAATCTTTGG+TGG | - | chr4.4:34774379-34774398 | None:intergenic | 50.0% | |
| AGAGTTGGAAGAGGTGGACA+TGG | - | chr4.4:34774505-34774524 | None:intergenic | 50.0% | |
| ATTGGAACAACCGGTGGCTT+TGG | - | chr4.4:34774442-34774461 | None:intergenic | 50.0% | |
| CATACACAGGTGTAGGTGGA+GGG | - | chr4.4:34774072-34774091 | None:intergenic | 50.0% | |
| CATGGTTTCTTGACCGGAAC+CGG | - | chr4.4:34774250-34774269 | None:intergenic | 50.0% | |
| CATGGTTTCTTGATCGGGAC+TGG | - | chr4.4:34774355-34774374 | None:intergenic | 50.0% | |
| GAAACCATGTCCACCACCAA+AGG | + | chr4.4:34774156-34774175 | MS.gene28961:CDS | 50.0% | |
| GGAGGCCATGATCCAAACTT+GGG | - | chr4.4:34774751-34774770 | None:intergenic | 50.0% | |
| GGAGGTTTGTATACTGGAGC+AGG | - | chr4.4:34774202-34774221 | None:intergenic | 50.0% | |
| GGATGTTCAACCTTTGGTGG+TGG | - | chr4.4:34774169-34774188 | None:intergenic | 50.0% | |
| GGGGGGAATTGAGGTAAATC+AGG | - | chr4.4:34773773-34773792 | None:intergenic | 50.0% | |
| GGTGGACATGGTTTCTTGAC+CGG | - | chr4.4:34774151-34774170 | None:intergenic | 50.0% | |
| GGTGGACATGGTTTCTTGAC+TGG | - | chr4.4:34774151-34774170 | None:intergenic | 50.0% | |
| GGTTTCTTGACTGGAACAGG+AGG | - | chr4.4:34774142-34774161 | None:intergenic | 50.0% | |
| GGTTTGTATACTGGAACGGG+TGG | - | chr4.4:34774304-34774323 | None:intergenic | 50.0% | |
| GGTTTGTATACTGGAGCAGG+TGG | - | chr4.4:34774199-34774218 | None:intergenic | 50.0% | |
| TACCAGCAGCAGCAGTACTT+AGG | - | chr4.4:34773667-34773686 | None:intergenic | 50.0% | |
| TAGGTGGAGGGAGAGGTTTA+TGG | - | chr4.4:34774060-34774079 | None:intergenic | 50.0% | |
| TCATACACAGGTGTAGGTGG+AGG | - | chr4.4:34774073-34774092 | None:intergenic | 50.0% | |
| TCATAGACAGGTGTAGGTGG+AGG | - | chr4.4:34774007-34774026 | None:intergenic | 50.0% | |
| TGATATACAGGCGTAGGTGG+AGG | - | chr4.4:34774106-34774125 | None:intergenic | 50.0% | |
| TGGAGGCCATGATCCAAACT+TGG | - | chr4.4:34774752-34774771 | None:intergenic | 50.0% | |
| TGGTGGAAGAAGCTCTTTGG+AGG | - | chr4.4:34774622-34774641 | None:intergenic | 50.0% | |
| TTCTTGACTGGAACAGGAGG+AGG | - | chr4.4:34774139-34774158 | None:intergenic | 50.0% | |
| TTGTATACTGGAGCAGGTGG+TGG | - | chr4.4:34774196-34774215 | None:intergenic | 50.0% | |
| TTTGGAGGCAGAGTTGGAAG+AGG | - | chr4.4:34774514-34774533 | None:intergenic | 50.0% | |
| ! | AAGACTAGCCAGGCTTTCTC+AGG | + | chr4.4:34772909-34772928 | MS.gene28961:CDS | 50.0% |
| ! | AAGCTCTTTGGAGGCAATGG+AGG | - | chr4.4:34774613-34774632 | None:intergenic | 50.0% |
| ! | AAGCTCTTTGGAGGCAGAGT+TGG | - | chr4.4:34774520-34774539 | None:intergenic | 50.0% |
| ! | GGTGGCCACTTTCCAAACTT+TGG | - | chr4.4:34774700-34774719 | None:intergenic | 50.0% |
| ! | TTTTGCAGGCCATCATGAGC+AGG | - | chr4.4:34773602-34773621 | None:intergenic | 50.0% |
| !! | TCAACCTTTGGTGGTGGACA+TGG | - | chr4.4:34774163-34774182 | None:intergenic | 50.0% |
| ACAGGTGTAGGAGGAGGGAT+AGG | - | chr4.4:34773968-34773987 | None:intergenic | 55.0% | |
| ACAGGTGTAGGTGGAGGAAG+AGG | - | chr4.4:34774001-34774020 | None:intergenic | 55.0% | |
| ACTGGAACAGGAGGAGGAAG+AGG | - | chr4.4:34774133-34774152 | None:intergenic | 55.0% | |
| AGGCCATCATGAGCAGGACA+AGG | - | chr4.4:34773596-34773615 | None:intergenic | 55.0% | |
| GCACCTTGTCCTGCTCATGA+TGG | + | chr4.4:34773590-34773609 | MS.gene28961:CDS | 55.0% | |
| GGATGCTCAACCTTTGGTGG+TGG | - | chr4.4:34774274-34774293 | None:intergenic | 55.0% | |
| GGTTTCTTGATCGGGACTGG+TGG | - | chr4.4:34774352-34774371 | None:intergenic | 55.0% | |
| GTTGGAAGAGGTGGACATGG+TGG | - | chr4.4:34774502-34774521 | None:intergenic | 55.0% | |
| TCCAAAGCCACAACCACCAC+CGG | + | chr4.4:34774228-34774247 | MS.gene28961:CDS | 55.0% | |
| ! | ACCCTAAGTACTGCTGCTGC+TGG | + | chr4.4:34773662-34773681 | MS.gene28961:CDS | 55.0% |
| ! | TTCTTGATCGGGACTGGTGG+TGG | - | chr4.4:34774349-34774368 | None:intergenic | 55.0% |
| !! | ACTGGTGGTGGAAGTGCCTT+TGG | - | chr4.4:34774337-34774356 | None:intergenic | 55.0% |
| !! | CAAACCTCCACCGGTTCCAA+AGG | + | chr4.4:34774318-34774337 | MS.gene28961:CDS | 55.0% |
| !! | GGGTGGTGGAAGAAGCTCTT+TGG | - | chr4.4:34774625-34774644 | None:intergenic | 55.0% |
| !! | GGTGGAAGTGCCTTTGGAAC+CGG | - | chr4.4:34774331-34774350 | None:intergenic | 55.0% |
| !! | GGTGGTTGTGGCTTTGGAAC+CGG | - | chr4.4:34774226-34774245 | None:intergenic | 55.0% |
| ACAGGCGTAGGTGGAGGAAG+AGG | - | chr4.4:34774100-34774119 | None:intergenic | 60.0% | |
| ACAGGTGTAGGTGGAGGGAG+AGG | - | chr4.4:34774067-34774086 | None:intergenic | 60.0% | |
| ATAGGCACAGGTGGAGGGCA+AGG | - | chr4.4:34773935-34773954 | None:intergenic | 60.0% | |
| GGAGGCAGAGTTGGAAGAGG+TGG | - | chr4.4:34774511-34774530 | None:intergenic | 60.0% | |
| GGTTTCTTGACCGGAACCGG+TGG | - | chr4.4:34774247-34774266 | None:intergenic | 60.0% | |
| TGGTAAACAGGCACAGGCGG+AGG | - | chr4.4:34774040-34774059 | None:intergenic | 60.0% | |
| TTCTTGACCGGAACCGGTGG+TGG | - | chr4.4:34774244-34774263 | None:intergenic | 60.0% | |
| ! | ACCGGTGGTGGTTGTGGCTT+TGG | - | chr4.4:34774232-34774251 | None:intergenic | 60.0% |
| !! | ACTGGAGCAGGTGGTGGAAC+TGG | - | chr4.4:34774190-34774209 | None:intergenic | 60.0% |
| !! | AGTGCCTTTGGAACCGGTGG+AGG | - | chr4.4:34774325-34774344 | None:intergenic | 60.0% |
| !! | GGAAGTGCCTTTGGAACCGG+TGG | - | chr4.4:34774328-34774347 | None:intergenic | 60.0% |
| !! | GGTTGTGGCTTTGGAACCGG+AGG | - | chr4.4:34774223-34774242 | None:intergenic | 60.0% |
| !! | TGTGGCTTTGGAACCGGAGG+AGG | - | chr4.4:34774220-34774239 | None:intergenic | 60.0% |
| ACAGGCACAGGCGGAGGAAG+AGG | - | chr4.4:34774034-34774053 | None:intergenic | 65.0% | |
| ! | ACCGGAACCGGTGGTGGTTG+TGG | - | chr4.4:34774238-34774257 | None:intergenic | 65.0% |
| !! | GCCACAACCACCACCGGTTC+CGG | + | chr4.4:34774234-34774253 | MS.gene28961:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 34772759 | 34774789 | 34772759 | ID=MS.gene28961 |
| chr4.4 | mRNA | 34772759 | 34774789 | 34772759 | ID=MS.gene28961.t1;Parent=MS.gene28961 |
| chr4.4 | exon | 34772759 | 34772930 | 34772759 | ID=MS.gene28961.t1.exon1;Parent=MS.gene28961.t1 |
| chr4.4 | CDS | 34772759 | 34772930 | 34772759 | ID=cds.MS.gene28961.t1;Parent=MS.gene28961.t1 |
| chr4.4 | exon | 34773423 | 34774789 | 34773423 | ID=MS.gene28961.t1.exon2;Parent=MS.gene28961.t1 |
| chr4.4 | CDS | 34773423 | 34774789 | 34773423 | ID=cds.MS.gene28961.t1;Parent=MS.gene28961.t1 |
| Gene Sequence |
| Protein sequence |
