Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36755.t1 | AET01504.2 | 58.6 | 459 | 133 | 9 | 3 | 412 | 1 | 451 | 1.00E-127 | 466.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36755.t1 | Q9SMU0 | 30.6 | 444 | 255 | 18 | 7 | 411 | 11 | 440 | 4.4e-31 | 137.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36755.t1 | G7LGM4 | 58.6 | 459 | 133 | 9 | 3 | 412 | 1 | 451 | 7.2e-128 | 466.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36755.t1 | MTR_8g014260 | 58.606 | 459 | 133 | 9 | 3 | 412 | 1 | 451 | 2.70e-164 | 469 |
MS.gene36755.t1 | MTR_4g024710 | 67.893 | 299 | 93 | 2 | 115 | 412 | 51 | 347 | 1.80e-141 | 407 |
MS.gene36755.t1 | MTR_8g445780 | 53.941 | 406 | 126 | 8 | 4 | 366 | 3 | 390 | 2.95e-124 | 365 |
MS.gene36755.t1 | MTR_4g024745 | 65.818 | 275 | 91 | 2 | 122 | 395 | 12 | 284 | 1.36e-116 | 342 |
MS.gene36755.t1 | MTR_8g014210 | 61.638 | 232 | 88 | 1 | 181 | 412 | 1 | 231 | 2.01e-90 | 273 |
MS.gene36755.t1 | MTR_2g083840 | 42.827 | 467 | 200 | 17 | 3 | 412 | 1 | 457 | 2.39e-89 | 278 |
MS.gene36755.t1 | MTR_8g077460 | 44.844 | 417 | 181 | 12 | 3 | 412 | 1 | 375 | 5.02e-89 | 275 |
MS.gene36755.t1 | MTR_8g467800 | 40.430 | 465 | 200 | 18 | 9 | 412 | 5 | 453 | 5.02e-80 | 254 |
MS.gene36755.t1 | MTR_8g468810 | 39.746 | 473 | 212 | 17 | 3 | 412 | 1 | 463 | 2.96e-79 | 252 |
MS.gene36755.t1 | MTR_8g062270 | 40.535 | 449 | 202 | 14 | 17 | 411 | 16 | 453 | 8.28e-78 | 248 |
MS.gene36755.t1 | MTR_5g092960 | 41.189 | 454 | 197 | 14 | 17 | 411 | 19 | 461 | 1.96e-76 | 244 |
MS.gene36755.t1 | MTR_8g014160 | 38.341 | 446 | 168 | 10 | 15 | 412 | 39 | 425 | 3.34e-75 | 240 |
MS.gene36755.t1 | MTR_8g468840 | 38.865 | 458 | 217 | 16 | 3 | 409 | 2 | 447 | 3.10e-68 | 223 |
MS.gene36755.t1 | MTR_8g468760 | 37.446 | 462 | 192 | 14 | 3 | 411 | 1 | 418 | 2.19e-65 | 215 |
MS.gene36755.t1 | MTR_4g032730 | 37.214 | 481 | 217 | 19 | 1 | 411 | 1 | 466 | 6.89e-65 | 215 |
MS.gene36755.t1 | MTR_8g070950 | 35.371 | 458 | 224 | 17 | 3 | 412 | 1 | 434 | 1.48e-60 | 202 |
MS.gene36755.t1 | MTR_8g058965 | 37.632 | 473 | 217 | 20 | 1 | 412 | 1 | 456 | 9.39e-58 | 196 |
MS.gene36755.t1 | MTR_8g058970 | 37.860 | 486 | 217 | 21 | 3 | 412 | 1 | 477 | 1.34e-57 | 196 |
MS.gene36755.t1 | MTR_8g469020 | 35.886 | 457 | 220 | 18 | 17 | 412 | 7 | 451 | 3.20e-55 | 189 |
MS.gene36755.t1 | MTR_8g062010 | 35.307 | 456 | 218 | 19 | 8 | 412 | 1 | 430 | 1.10e-54 | 187 |
MS.gene36755.t1 | MTR_8g062310 | 37.215 | 438 | 199 | 23 | 17 | 412 | 25 | 428 | 1.72e-52 | 181 |
MS.gene36755.t1 | MTR_8g468810 | 38.462 | 377 | 166 | 14 | 3 | 322 | 1 | 368 | 6.18e-52 | 178 |
MS.gene36755.t1 | MTR_8g062080 | 33.113 | 453 | 238 | 21 | 9 | 412 | 9 | 445 | 5.62e-48 | 170 |
MS.gene36755.t1 | MTR_5g092960 | 38.378 | 370 | 166 | 11 | 3 | 319 | 5 | 365 | 3.78e-45 | 161 |
MS.gene36755.t1 | MTR_8g468810 | 36.499 | 337 | 151 | 11 | 3 | 288 | 1 | 325 | 3.32e-44 | 157 |
MS.gene36755.t1 | MTR_8g468810 | 36.842 | 323 | 145 | 10 | 3 | 274 | 1 | 315 | 1.69e-43 | 154 |
MS.gene36755.t1 | MTR_8g468810 | 36.842 | 323 | 145 | 10 | 3 | 274 | 1 | 315 | 2.28e-43 | 155 |
MS.gene36755.t1 | MTR_4g050250 | 35.071 | 422 | 192 | 20 | 9 | 358 | 8 | 419 | 3.13e-43 | 156 |
MS.gene36755.t1 | MTR_8g467800 | 38.994 | 318 | 129 | 14 | 9 | 274 | 5 | 309 | 2.47e-41 | 149 |
MS.gene36755.t1 | MTR_8g062300 | 30.533 | 488 | 247 | 15 | 4 | 412 | 3 | 477 | 1.25e-38 | 145 |
MS.gene36755.t1 | MTR_8g014230 | 64.773 | 88 | 30 | 1 | 325 | 412 | 18 | 104 | 5.97e-33 | 120 |
MS.gene36755.t1 | MTR_5g021550 | 61.261 | 111 | 40 | 2 | 12 | 122 | 14 | 121 | 9.38e-33 | 121 |
MS.gene36755.t1 | MTR_8g014290 | 58.036 | 112 | 42 | 2 | 15 | 122 | 8 | 118 | 8.96e-32 | 119 |
MS.gene36755.t1 | MTR_2g086020 | 32.533 | 375 | 186 | 14 | 44 | 412 | 2 | 315 | 2.72e-30 | 119 |
MS.gene36755.t1 | MTR_4g024720 | 57.600 | 125 | 42 | 6 | 3 | 122 | 1 | 119 | 2.52e-29 | 113 |
MS.gene36755.t1 | MTR_8g467790 | 31.169 | 385 | 176 | 18 | 17 | 354 | 148 | 490 | 1.44e-28 | 117 |
MS.gene36755.t1 | MTR_1g041245 | 31.116 | 421 | 220 | 23 | 17 | 412 | 11 | 386 | 1.08e-24 | 105 |
MS.gene36755.t1 | MTR_5g084070 | 28.670 | 436 | 250 | 16 | 9 | 404 | 5 | 419 | 1.34e-24 | 105 |
MS.gene36755.t1 | MTR_4g080787 | 27.331 | 472 | 269 | 15 | 2 | 411 | 4 | 463 | 1.43e-24 | 105 |
MS.gene36755.t1 | MTR_3g108560 | 27.857 | 420 | 233 | 16 | 14 | 411 | 17 | 388 | 2.52e-23 | 101 |
MS.gene36755.t1 | MTR_7g098510 | 28.774 | 424 | 236 | 16 | 11 | 412 | 12 | 391 | 2.63e-23 | 100 |
MS.gene36755.t1 | MTR_7g056433 | 27.529 | 425 | 238 | 15 | 14 | 412 | 9 | 389 | 6.83e-22 | 97.1 |
MS.gene36755.t1 | MTR_5g080710 | 29.519 | 437 | 252 | 19 | 9 | 404 | 25 | 446 | 8.85e-22 | 97.4 |
MS.gene36755.t1 | MTR_5g039950 | 28.607 | 402 | 230 | 15 | 9 | 381 | 15 | 388 | 2.19e-20 | 92.8 |
MS.gene36755.t1 | MTR_4g080773 | 26.667 | 465 | 257 | 15 | 2 | 400 | 4 | 450 | 7.44e-20 | 92.0 |
MS.gene36755.t1 | MTR_4g080773 | 26.667 | 465 | 257 | 15 | 2 | 400 | 4 | 450 | 1.04e-19 | 91.3 |
MS.gene36755.t1 | MTR_4g024770 | 69.841 | 63 | 16 | 2 | 2 | 62 | 7 | 68 | 1.40e-19 | 82.8 |
MS.gene36755.t1 | MTR_5g008950 | 26.150 | 413 | 238 | 16 | 19 | 412 | 1 | 365 | 2.47e-19 | 89.4 |
MS.gene36755.t1 | MTR_1089s0010 | 22.673 | 419 | 266 | 11 | 11 | 412 | 2 | 379 | 9.82e-19 | 87.8 |
MS.gene36755.t1 | MTR_7g098570 | 28.251 | 446 | 222 | 21 | 3 | 408 | 2 | 389 | 3.50e-18 | 86.7 |
MS.gene36755.t1 | MTR_6g044572 | 26.773 | 437 | 229 | 20 | 17 | 412 | 2 | 388 | 4.31e-18 | 85.9 |
MS.gene36755.t1 | MTR_6g044560 | 27.465 | 426 | 240 | 19 | 17 | 412 | 178 | 564 | 1.83e-17 | 84.7 |
MS.gene36755.t1 | MTR_8g014180 | 69.492 | 59 | 15 | 2 | 3 | 59 | 1 | 58 | 2.07e-17 | 76.3 |
MS.gene36755.t1 | MTR_2g082800 | 26.253 | 419 | 221 | 16 | 9 | 371 | 18 | 404 | 1.30e-15 | 78.6 |
MS.gene36755.t1 | MTR_7g034115 | 26.471 | 408 | 245 | 16 | 17 | 408 | 11 | 379 | 7.55e-14 | 72.8 |
MS.gene36755.t1 | MTR_7g007340 | 28.000 | 425 | 191 | 19 | 13 | 405 | 9 | 350 | 8.71e-14 | 72.8 |
MS.gene36755.t1 | MTR_3g108560 | 28.049 | 328 | 169 | 14 | 14 | 322 | 17 | 296 | 9.46e-14 | 72.0 |
MS.gene36755.t1 | MTR_4g056030 | 26.593 | 455 | 239 | 18 | 14 | 401 | 6 | 432 | 4.64e-13 | 70.9 |
MS.gene36755.t1 | MTR_1g085120 | 25.592 | 422 | 248 | 17 | 16 | 412 | 91 | 471 | 1.02e-12 | 70.1 |
MS.gene36755.t1 | MTR_1g085120 | 25.592 | 422 | 248 | 17 | 16 | 412 | 166 | 546 | 1.04e-12 | 70.1 |
MS.gene36755.t1 | MTR_8g014220 | 36.612 | 183 | 72 | 9 | 3 | 165 | 1 | 159 | 1.49e-12 | 65.9 |
MS.gene36755.t1 | MTR_1g038710 | 26.869 | 428 | 234 | 14 | 15 | 380 | 17 | 427 | 2.43e-12 | 68.6 |
MS.gene36755.t1 | MTR_2g047848 | 25.901 | 444 | 259 | 18 | 14 | 411 | 4 | 423 | 4.94e-12 | 67.8 |
MS.gene36755.t1 | MTR_1g014450 | 24.887 | 442 | 249 | 19 | 15 | 404 | 14 | 424 | 5.96e-12 | 67.4 |
MS.gene36755.t1 | MTR_4g080590 | 26.794 | 418 | 233 | 16 | 16 | 380 | 22 | 419 | 9.04e-12 | 67.0 |
MS.gene36755.t1 | MTR_4g092430 | 28.980 | 245 | 128 | 9 | 1 | 226 | 22 | 239 | 9.84e-12 | 67.0 |
MS.gene36755.t1 | MTR_7g056020 | 26.942 | 412 | 222 | 17 | 14 | 404 | 13 | 366 | 1.02e-11 | 67.0 |
MS.gene36755.t1 | MTR_4g092430 | 28.571 | 245 | 129 | 8 | 1 | 226 | 22 | 239 | 1.03e-11 | 67.0 |
MS.gene36755.t1 | MTR_3g108150 | 30.542 | 203 | 96 | 7 | 16 | 183 | 12 | 204 | 1.99e-11 | 65.5 |
MS.gene36755.t1 | MTR_1g107385 | 24.885 | 434 | 244 | 20 | 16 | 410 | 31 | 421 | 2.74e-11 | 65.5 |
MS.gene36755.t1 | MTR_4g056020 | 25.682 | 440 | 237 | 18 | 14 | 388 | 6 | 420 | 3.06e-11 | 65.5 |
MS.gene36755.t1 | MTR_4g051640 | 38.235 | 102 | 51 | 4 | 1 | 100 | 12 | 103 | 3.39e-11 | 62.0 |
MS.gene36755.t1 | MTR_0009s0080 | 24.000 | 400 | 235 | 18 | 9 | 380 | 9 | 367 | 3.50e-11 | 65.1 |
MS.gene36755.t1 | MTR_5g012840 | 23.545 | 378 | 214 | 10 | 40 | 412 | 11 | 318 | 3.72e-11 | 64.3 |
MS.gene36755.t1 | MTR_2g007500 | 34.054 | 185 | 96 | 7 | 11 | 173 | 8 | 188 | 4.15e-11 | 64.3 |
MS.gene36755.t1 | MTR_7g039630 | 28.696 | 345 | 193 | 18 | 9 | 321 | 15 | 338 | 4.19e-11 | 64.3 |
MS.gene36755.t1 | MTR_7g056420 | 34.146 | 164 | 89 | 7 | 16 | 170 | 8 | 161 | 4.60e-11 | 65.5 |
MS.gene36755.t1 | MTR_7g056430 | 34.146 | 164 | 89 | 7 | 16 | 170 | 8 | 161 | 4.69e-11 | 65.5 |
MS.gene36755.t1 | MTR_2g047858 | 24.123 | 456 | 267 | 19 | 7 | 412 | 105 | 531 | 4.73e-11 | 64.7 |
MS.gene36755.t1 | MTR_4g055990 | 27.215 | 316 | 176 | 11 | 123 | 401 | 176 | 474 | 8.52e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36755.t1 | AT4G26340 | 29.680 | 438 | 246 | 12 | 17 | 412 | 2 | 419 | 7.45e-39 | 144 |
MS.gene36755.t1 | AT3G49030 | 30.631 | 444 | 255 | 18 | 7 | 411 | 11 | 440 | 5.76e-35 | 134 |
MS.gene36755.t1 | AT3G49030 | 29.478 | 441 | 238 | 18 | 7 | 411 | 11 | 414 | 5.66e-31 | 123 |
MS.gene36755.t1 | AT2G04230 | 27.948 | 458 | 258 | 17 | 10 | 412 | 6 | 446 | 4.23e-28 | 115 |
MS.gene36755.t1 | AT1G32375 | 27.523 | 436 | 261 | 13 | 17 | 412 | 2 | 422 | 7.99e-28 | 114 |
MS.gene36755.t1 | AT1G32375 | 27.523 | 436 | 261 | 13 | 17 | 412 | 2 | 422 | 7.99e-28 | 114 |
MS.gene36755.t1 | AT3G50710 | 29.596 | 446 | 244 | 19 | 17 | 412 | 2 | 427 | 1.36e-25 | 108 |
MS.gene36755.t1 | AT4G00160 | 28.153 | 444 | 254 | 18 | 16 | 411 | 15 | 441 | 2.91e-25 | 107 |
MS.gene36755.t1 | AT5G56420 | 28.378 | 444 | 245 | 17 | 16 | 412 | 5 | 422 | 1.08e-24 | 105 |
MS.gene36755.t1 | AT5G56420 | 28.378 | 444 | 245 | 17 | 16 | 412 | 5 | 422 | 1.08e-24 | 105 |
MS.gene36755.t1 | AT5G56420 | 28.378 | 444 | 245 | 17 | 16 | 412 | 5 | 422 | 1.08e-24 | 105 |
MS.gene36755.t1 | AT5G38570 | 27.160 | 405 | 254 | 11 | 17 | 411 | 2 | 375 | 6.26e-24 | 102 |
MS.gene36755.t1 | AT3G49020 | 29.318 | 440 | 255 | 16 | 15 | 412 | 20 | 445 | 2.68e-23 | 101 |
MS.gene36755.t1 | AT3G52680 | 29.130 | 460 | 256 | 20 | 2 | 411 | 5 | 444 | 3.06e-23 | 101 |
MS.gene36755.t1 | AT5G38590 | 27.250 | 400 | 242 | 14 | 17 | 382 | 2 | 386 | 4.07e-22 | 97.8 |
MS.gene36755.t1 | AT5G56370 | 27.107 | 439 | 256 | 15 | 17 | 411 | 2 | 420 | 1.19e-21 | 96.7 |
MS.gene36755.t1 | AT5G56370 | 27.107 | 439 | 256 | 15 | 17 | 411 | 2 | 420 | 1.19e-21 | 96.7 |
MS.gene36755.t1 | AT4G10400 | 26.328 | 433 | 255 | 16 | 17 | 411 | 2 | 408 | 1.58e-21 | 96.3 |
MS.gene36755.t1 | AT4G10400 | 26.328 | 433 | 255 | 16 | 17 | 411 | 2 | 408 | 1.58e-21 | 96.3 |
MS.gene36755.t1 | AT4G10400 | 26.328 | 433 | 255 | 16 | 17 | 411 | 2 | 408 | 1.58e-21 | 96.3 |
MS.gene36755.t1 | AT4G13965 | 28.169 | 426 | 258 | 16 | 17 | 409 | 10 | 420 | 2.17e-21 | 95.9 |
MS.gene36755.t1 | AT1G51370 | 28.111 | 434 | 255 | 16 | 13 | 407 | 15 | 430 | 7.74e-21 | 94.4 |
MS.gene36755.t1 | AT2G26860 | 29.621 | 422 | 220 | 16 | 17 | 384 | 2 | 400 | 1.10e-20 | 93.6 |
MS.gene36755.t1 | AT2G26860 | 29.621 | 422 | 220 | 16 | 17 | 384 | 2 | 400 | 1.10e-20 | 93.6 |
MS.gene36755.t1 | AT5G56560 | 25.785 | 446 | 255 | 19 | 14 | 412 | 2 | 418 | 1.19e-20 | 93.6 |
MS.gene36755.t1 | AT5G56820 | 28.285 | 449 | 254 | 20 | 3 | 409 | 1 | 423 | 1.67e-20 | 93.6 |
MS.gene36755.t1 | AT5G56390 | 26.304 | 441 | 261 | 15 | 17 | 411 | 2 | 424 | 3.27e-19 | 89.4 |
MS.gene36755.t1 | AT3G49040 | 31.667 | 240 | 125 | 8 | 14 | 220 | 14 | 247 | 4.05e-19 | 87.8 |
MS.gene36755.t1 | AT5G60610 | 26.290 | 407 | 237 | 14 | 17 | 381 | 2 | 387 | 1.89e-18 | 87.0 |
MS.gene36755.t1 | AT5G60610 | 26.290 | 407 | 237 | 14 | 17 | 381 | 2 | 387 | 1.89e-18 | 87.0 |
MS.gene36755.t1 | AT5G56440 | 27.069 | 447 | 255 | 17 | 17 | 411 | 2 | 429 | 2.06e-18 | 87.0 |
MS.gene36755.t1 | AT3G26930 | 26.637 | 443 | 270 | 14 | 11 | 412 | 15 | 443 | 5.88e-18 | 85.9 |
MS.gene36755.t1 | AT1G16930 | 26.496 | 468 | 267 | 21 | 3 | 412 | 1 | 449 | 9.02e-18 | 85.5 |
MS.gene36755.t1 | AT1G16930 | 26.496 | 468 | 267 | 21 | 3 | 412 | 1 | 449 | 9.02e-18 | 85.5 |
MS.gene36755.t1 | AT1G16930 | 26.496 | 468 | 267 | 21 | 3 | 412 | 1 | 449 | 9.02e-18 | 85.5 |
MS.gene36755.t1 | AT5G50270 | 26.603 | 421 | 252 | 14 | 17 | 394 | 2 | 408 | 1.69e-17 | 84.3 |
MS.gene36755.t1 | AT5G56800 | 29.682 | 283 | 170 | 13 | 141 | 411 | 78 | 343 | 1.74e-17 | 83.6 |
MS.gene36755.t1 | AT5G44950 | 27.460 | 437 | 261 | 20 | 17 | 405 | 4 | 432 | 1.99e-17 | 84.3 |
MS.gene36755.t1 | AT4G26350 | 26.622 | 447 | 257 | 16 | 17 | 412 | 2 | 428 | 3.05e-17 | 83.6 |
MS.gene36755.t1 | AT3G59200 | 30.597 | 268 | 135 | 9 | 17 | 242 | 7 | 265 | 4.64e-17 | 83.6 |
MS.gene36755.t1 | AT3G59200 | 30.597 | 268 | 135 | 9 | 17 | 242 | 7 | 265 | 5.26e-17 | 82.4 |
MS.gene36755.t1 | AT5G56400 | 25.951 | 447 | 256 | 20 | 17 | 412 | 33 | 455 | 7.52e-17 | 82.4 |
MS.gene36755.t1 | AT5G41840 | 29.412 | 374 | 188 | 15 | 17 | 319 | 14 | 382 | 1.85e-16 | 81.6 |
MS.gene36755.t1 | AT5G56810 | 27.333 | 450 | 265 | 14 | 3 | 409 | 1 | 431 | 2.46e-16 | 80.9 |
MS.gene36755.t1 | AT1G80470 | 22.472 | 445 | 298 | 13 | 3 | 410 | 1 | 435 | 6.88e-16 | 79.7 |
MS.gene36755.t1 | AT1G51370 | 28.232 | 379 | 217 | 14 | 13 | 353 | 15 | 376 | 1.29e-15 | 78.6 |
MS.gene36755.t1 | AT3G52690 | 30.201 | 298 | 167 | 15 | 135 | 411 | 20 | 297 | 1.32e-15 | 77.4 |
MS.gene36755.t1 | AT1G55030 | 25.229 | 436 | 262 | 19 | 17 | 411 | 19 | 431 | 2.26e-15 | 77.8 |
MS.gene36755.t1 | AT1G55030 | 25.229 | 436 | 262 | 19 | 17 | 411 | 9 | 421 | 2.33e-15 | 77.8 |
MS.gene36755.t1 | AT5G53840 | 26.364 | 440 | 267 | 19 | 12 | 409 | 13 | 437 | 2.59e-15 | 77.8 |
MS.gene36755.t1 | AT1G69630 | 27.033 | 455 | 260 | 16 | 5 | 404 | 6 | 443 | 3.10e-15 | 77.8 |
MS.gene36755.t1 | AT5G62970 | 25.163 | 461 | 265 | 19 | 17 | 411 | 2 | 448 | 3.63e-15 | 77.4 |
MS.gene36755.t1 | AT5G56560 | 27.055 | 292 | 179 | 11 | 136 | 412 | 335 | 607 | 6.08e-15 | 77.0 |
MS.gene36755.t1 | AT1G16940 | 27.149 | 442 | 261 | 19 | 1 | 410 | 1 | 413 | 1.15e-14 | 75.9 |
MS.gene36755.t1 | AT3G26920 | 28.070 | 285 | 184 | 11 | 137 | 411 | 66 | 339 | 1.67e-14 | 74.7 |
MS.gene36755.t1 | AT3G26920 | 28.070 | 285 | 184 | 11 | 137 | 411 | 66 | 339 | 1.67e-14 | 74.7 |
MS.gene36755.t1 | AT3G54910 | 27.211 | 294 | 190 | 10 | 125 | 412 | 98 | 373 | 5.40e-14 | 73.6 |
MS.gene36755.t1 | AT3G54910 | 27.211 | 294 | 190 | 10 | 125 | 412 | 98 | 373 | 5.40e-14 | 73.6 |
MS.gene36755.t1 | AT3G54910 | 27.211 | 294 | 190 | 10 | 125 | 412 | 98 | 373 | 5.40e-14 | 73.6 |
MS.gene36755.t1 | AT5G56380 | 26.754 | 456 | 256 | 19 | 17 | 412 | 2 | 439 | 7.30e-14 | 73.6 |
MS.gene36755.t1 | AT5G56380 | 26.754 | 456 | 256 | 19 | 17 | 412 | 2 | 439 | 7.30e-14 | 73.6 |
MS.gene36755.t1 | AT5G38590 | 27.402 | 281 | 170 | 9 | 17 | 270 | 2 | 275 | 3.22e-13 | 70.1 |
MS.gene36755.t1 | AT1G51055 | 34.351 | 131 | 73 | 4 | 290 | 412 | 36 | 161 | 5.29e-13 | 67.0 |
MS.gene36755.t1 | AT3G26930 | 24.146 | 410 | 257 | 13 | 44 | 412 | 2 | 398 | 1.64e-12 | 68.9 |
MS.gene36755.t1 | AT5G56570 | 23.673 | 452 | 265 | 21 | 5 | 412 | 24 | 439 | 2.11e-12 | 68.9 |
MS.gene36755.t1 | AT4G09920 | 29.327 | 208 | 118 | 6 | 17 | 196 | 2 | 208 | 1.13e-11 | 65.5 |
MS.gene36755.t1 | AT4G09920 | 29.327 | 208 | 118 | 6 | 17 | 196 | 2 | 208 | 1.13e-11 | 65.5 |
MS.gene36755.t1 | AT4G09920 | 29.327 | 208 | 118 | 6 | 17 | 196 | 2 | 208 | 1.13e-11 | 65.5 |
MS.gene36755.t1 | AT1G51370 | 28.024 | 339 | 195 | 12 | 13 | 319 | 15 | 336 | 1.24e-11 | 65.9 |
MS.gene36755.t1 | AT4G09920 | 29.327 | 208 | 118 | 6 | 17 | 196 | 2 | 208 | 1.38e-11 | 65.5 |
MS.gene36755.t1 | AT4G09920 | 29.327 | 208 | 118 | 6 | 17 | 196 | 2 | 208 | 1.38e-11 | 65.5 |
MS.gene36755.t1 | AT3G62430 | 25.339 | 442 | 270 | 14 | 17 | 409 | 2 | 432 | 1.98e-11 | 65.9 |
MS.gene36755.t1 | AT2G39415 | 53.571 | 56 | 25 | 1 | 8 | 63 | 29 | 83 | 2.21e-11 | 61.2 |
MS.gene36755.t1 | AT1G49610 | 33.511 | 188 | 94 | 8 | 14 | 194 | 23 | 186 | 2.38e-11 | 65.1 |
MS.gene36755.t1 | AT1G22000 | 24.396 | 455 | 250 | 17 | 16 | 409 | 28 | 449 | 7.43e-11 | 64.3 |
Find 88 sgRNAs with CRISPR-Local
Find 147 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGACCTTTATTCAATTTAA+AGG | 0.140904 | 8.2:-78789676 | MS.gene36755:CDS |
AGCATCAAAATTTCTATGTT+TGG | 0.219217 | 8.2:+78790570 | None:intergenic |
ACTCAGAAGCTTCGCTGTTT+TGG | 0.280021 | 8.2:-78791160 | MS.gene36755:CDS |
TAATTGTTGTAGAGCTTTGT+AGG | 0.290039 | 8.2:+78790673 | None:intergenic |
AAAACCTTTAAATTGAATAA+AGG | 0.336412 | 8.2:+78789672 | None:intergenic |
GCATCAAAATTTCTATGTTT+GGG | 0.344643 | 8.2:+78790571 | None:intergenic |
AGGTGCGATATGAGACAATT+AGG | 0.354804 | 8.2:+78789697 | None:intergenic |
AAGCAAGCAAAGTAGTGAAT+TGG | 0.363036 | 8.2:+78789990 | None:intergenic |
CATCTAGGAGCTTGAGTAAT+GGG | 0.366341 | 8.2:+78790310 | None:intergenic |
CAAAACTTAACCTTAGTTGT+TGG | 0.373804 | 8.2:+78790252 | None:intergenic |
CATCTCTATCCCATGTCGTT+TGG | 0.377720 | 8.2:-78790342 | MS.gene36755:CDS |
TCCGTAATCCTCGCGCCATT+CGG | 0.386896 | 8.2:-78791116 | MS.gene36755:CDS |
TGTGGAGCCCATCCTAAAAT+TGG | 0.389214 | 8.2:+78789730 | None:intergenic |
GCTGGTGGAAACCACGGTTT+TGG | 0.389987 | 8.2:+78791284 | None:intergenic |
ATTTAGAGCTCATGCTGACC+TGG | 0.395215 | 8.2:-78790020 | MS.gene36755:CDS |
CTCGCCGGTGGCGACACCTT+TGG | 0.406449 | 8.2:-78791254 | MS.gene36755:CDS |
GATTATTTCTGATATTTCCT+TGG | 0.407803 | 8.2:-78789581 | MS.gene36755:CDS |
AACATCATGGAATGGGCATT+GGG | 0.425635 | 8.2:+78790407 | None:intergenic |
GAATGTCGTACTTCTCCCTT+TGG | 0.427201 | 8.2:+78789557 | None:intergenic |
TGTTTGTTCCTCAGTATCCA+TGG | 0.429945 | 8.2:-78790711 | MS.gene36755:intron |
AAACATCATGGAATGGGCAT+TGG | 0.430298 | 8.2:+78790406 | None:intergenic |
TCCGAATGGCGCGAGGATTA+CGG | 0.439326 | 8.2:+78791115 | None:intergenic |
TCAAATGTGTCAAGGGCCTC+TGG | 0.439865 | 8.2:-78789523 | MS.gene36755:CDS |
CACGTGCCGATTCAGTTAAC+AGG | 0.442811 | 8.2:-78791050 | MS.gene36755:intron |
TTTGCTGACAATGACGGTGG+TGG | 0.444287 | 8.2:-78790477 | MS.gene36755:CDS |
AACCCACCTGTTAACTGAAT+CGG | 0.449798 | 8.2:+78791044 | None:intergenic |
TGATATTTCCTTGGACCAAA+GGG | 0.451414 | 8.2:-78789572 | MS.gene36755:CDS |
AAGCTCCTAGATGCTCTGTC+CGG | 0.462781 | 8.2:-78790300 | MS.gene36755:CDS |
TTTGAGTAGTCCAACAACTA+AGG | 0.473906 | 8.2:-78790262 | MS.gene36755:intron |
TCAACAAATGACATCTCATC+TGG | 0.477145 | 8.2:+78789640 | None:intergenic |
CTTTAAATTGAATAAAGGTC+AGG | 0.486856 | 8.2:+78789677 | None:intergenic |
CTGATATTTCCTTGGACCAA+AGG | 0.487521 | 8.2:-78789573 | MS.gene36755:CDS |
TGTTTAAAACATCATGGAAT+GGG | 0.490438 | 8.2:+78790400 | None:intergenic |
TCTGCGTGTTTAAAACATCA+TGG | 0.491336 | 8.2:+78790394 | None:intergenic |
ACATCCCACCTACCTTGAAA+AGG | 0.492710 | 8.2:-78790509 | MS.gene36755:CDS |
TCGGGAGGCGTGAGAGGATG+TGG | 0.496398 | 8.2:+78791307 | None:intergenic |
TGGCGCGAGGATTACGGAGG+AGG | 0.497489 | 8.2:+78791121 | None:intergenic |
TTGTCCCGGACAGAGCATCT+AGG | 0.503175 | 8.2:+78790295 | None:intergenic |
AAGATTCTGTTAATTGACAT+TGG | 0.510535 | 8.2:-78790636 | MS.gene36755:CDS |
ACACCTTTGGCAGAATCTCC+AGG | 0.512480 | 8.2:-78791241 | MS.gene36755:CDS |
GTACTTCTCCCTTTGGTCCA+AGG | 0.515790 | 8.2:+78789564 | None:intergenic |
TGGTTGAGCAGCACATTGTC+TGG | 0.516849 | 8.2:+78791327 | None:intergenic |
AGCTCCTAGATGCTCTGTCC+GGG | 0.517194 | 8.2:-78790299 | MS.gene36755:CDS |
CATCTCAGTCAAATGTAAGT+TGG | 0.521303 | 8.2:+78789494 | None:intergenic |
CCACCAGCTGTCTATCTCGC+CGG | 0.523462 | 8.2:-78791269 | MS.gene36755:CDS |
CCCACCTACCTTGAAAAGGC+TGG | 0.525727 | 8.2:-78790505 | MS.gene36755:CDS |
GTGTTTAAAACATCATGGAA+TGG | 0.533456 | 8.2:+78790399 | None:intergenic |
GTTTGTTCCTCAGTATCCAT+GGG | 0.538734 | 8.2:-78790710 | MS.gene36755:intron |
TGTCTGGTAAACTACTAATC+CGG | 0.542247 | 8.2:+78791343 | None:intergenic |
GAGGATTACGGAGGAGGGAA+AGG | 0.542632 | 8.2:+78791127 | None:intergenic |
TTGCTGACAATGACGGTGGT+GGG | 0.547491 | 8.2:-78790476 | MS.gene36755:CDS |
AAAATTATCAAATGTGTCAA+GGG | 0.548170 | 8.2:-78789530 | MS.gene36755:CDS |
TCTGCCAAAGGTGTCGCCAC+CGG | 0.553605 | 8.2:+78791250 | None:intergenic |
GACAATGAAACCAAACGACA+TGG | 0.562304 | 8.2:+78790332 | None:intergenic |
TTTAGAGCTCATGCTGACCT+GGG | 0.566033 | 8.2:-78790019 | MS.gene36755:CDS |
CATCATCGAAAACTAGCACC+TGG | 0.566123 | 8.2:+78791223 | None:intergenic |
GCATCTAGGAGCTTGAGTAA+TGG | 0.570363 | 8.2:+78790309 | None:intergenic |
TCTCAAAATTCAGATCTACA+AGG | 0.571443 | 8.2:-78789944 | MS.gene36755:intron |
ATGAGACAATTAGGAACACT+TGG | 0.572179 | 8.2:+78789706 | None:intergenic |
GGCGCGAGGATTACGGAGGA+GGG | 0.580879 | 8.2:+78791122 | None:intergenic |
GTGGACAAACAGTGGCTGCT+TGG | 0.586558 | 8.2:-78790087 | MS.gene36755:intron |
GACTTCTTTGCTGACAATGA+CGG | 0.589494 | 8.2:-78790483 | MS.gene36755:CDS |
CAAACGACATGGGATAGAGA+TGG | 0.595053 | 8.2:+78790343 | None:intergenic |
CAATTAGGAACACTTGGCTG+TGG | 0.595075 | 8.2:+78789712 | None:intergenic |
GGAGCCCATCCTAAAATTGG+TGG | 0.598007 | 8.2:+78789733 | None:intergenic |
ATTAACAGAATCTTCAATGA+CGG | 0.599299 | 8.2:+78790645 | None:intergenic |
CCGGCGAGATAGACAGCTGG+TGG | 0.600529 | 8.2:+78791269 | None:intergenic |
TGTTGAACCGACAATGACAA+TGG | 0.600662 | 8.2:-78791406 | None:intergenic |
GGTGCGTTAATTTCAAGTGA+AGG | 0.600874 | 8.2:+78790453 | None:intergenic |
GCACCTGGAGATTCTGCCAA+AGG | 0.609992 | 8.2:+78791238 | None:intergenic |
TCTATCAATGCACTCCTCTG+TGG | 0.614921 | 8.2:-78790597 | MS.gene36755:CDS |
GGTTTACACGAATTGTCCCA+TGG | 0.615081 | 8.2:+78790694 | None:intergenic |
ATGGGCATTGGGTAATGTCA+AGG | 0.616184 | 8.2:+78790418 | None:intergenic |
GATGAGATGCATCTTCCGAA+TGG | 0.620272 | 8.2:+78791101 | None:intergenic |
CTATGTTTGGGCAGCCACAG+AGG | 0.627817 | 8.2:+78790583 | None:intergenic |
TTCTTTGCTGACAATGACGG+TGG | 0.629876 | 8.2:-78790480 | MS.gene36755:CDS |
CCACCGGCGAGATAGACAGC+TGG | 0.631496 | 8.2:+78791266 | None:intergenic |
TGCATCTTCCGAATGGCGCG+AGG | 0.643628 | 8.2:+78791108 | None:intergenic |
ACAATGAAACCAAACGACAT+GGG | 0.644148 | 8.2:+78790333 | None:intergenic |
ATGTCAAGGTACTCAAGATG+AGG | 0.649266 | 8.2:+78790432 | None:intergenic |
ACGTGAGTTGTCATCGACAA+CGG | 0.652346 | 8.2:+78791068 | None:intergenic |
TAGTGAATTGGAGTTAACCC+AGG | 0.656521 | 8.2:+78790002 | None:intergenic |
TAGACAGCTGGTGGAAACCA+CGG | 0.657908 | 8.2:+78791278 | None:intergenic |
CCAGCTGTCTATCTCGCCGG+TGG | 0.664869 | 8.2:-78791266 | MS.gene36755:CDS |
CACGCAGAACTTGCACAATG+TGG | 0.672729 | 8.2:-78790379 | MS.gene36755:CDS |
TGTAAGTTGGCACATTCCAG+AGG | 0.679400 | 8.2:+78789507 | None:intergenic |
ACGCCTCCCGACCAAAACCG+TGG | 0.688622 | 8.2:-78791295 | MS.gene36755:CDS |
GAATGGCGCGAGGATTACGG+AGG | 0.721959 | 8.2:+78791118 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATCATGATTTATTTATTTA+TGG | - | chr8.2:78790745-78790764 | MS.gene36755:intron | 10.0% |
!! | AAAACCTTTAAATTGAATAA+AGG | + | chr8.2:78791222-78791241 | None:intergenic | 15.0% |
!! | TTAATCATGTATATATTAAG+TGG | + | chr8.2:78791082-78791101 | None:intergenic | 15.0% |
!!! | GTTTAATTTGAAGTTTAATT+CGG | - | chr8.2:78790973-78790992 | MS.gene36755:intron | 15.0% |
!! | AAAAATTATCAAATGTGTCA+AGG | - | chr8.2:78791360-78791379 | MS.gene36755:CDS | 20.0% |
!! | AAAATTATCAAATGTGTCAA+GGG | - | chr8.2:78791361-78791380 | MS.gene36755:CDS | 20.0% |
!!! | ATTCAATTTAAAGGTTTTCA+AGG | - | chr8.2:78791224-78791243 | MS.gene36755:CDS | 20.0% |
!!! | TTGCTTTAAATCTTAAGTAT+TGG | - | chr8.2:78790115-78790134 | MS.gene36755:intron | 20.0% |
! | AAGATTCTGTTAATTGACAT+TGG | - | chr8.2:78790255-78790274 | MS.gene36755:intron | 25.0% |
! | AGATTTCAAGCAAATCATAT+TGG | + | chr8.2:78790077-78790096 | None:intergenic | 25.0% |
! | AGCATCAAAATTTCTATGTT+TGG | + | chr8.2:78790324-78790343 | None:intergenic | 25.0% |
! | ATTAACAGAATCTTCAATGA+CGG | + | chr8.2:78790249-78790268 | None:intergenic | 25.0% |
! | ATTCTTGAAAAAGCAATTCA+CGG | + | chr8.2:78790836-78790855 | None:intergenic | 25.0% |
! | CTGACCTTTATTCAATTTAA+AGG | - | chr8.2:78791215-78791234 | MS.gene36755:CDS | 25.0% |
! | CTTTAAATTGAATAAAGGTC+AGG | + | chr8.2:78791217-78791236 | None:intergenic | 25.0% |
! | GCATCAAAATTTCTATGTTT+GGG | + | chr8.2:78790323-78790342 | None:intergenic | 25.0% |
! | GTTGTTCTTTATTGTTTACT+AGG | - | chr8.2:78790038-78790057 | MS.gene36755:CDS | 25.0% |
! | TTATGACCATGAAAAAAGAA+TGG | - | chr8.2:78790350-78790369 | MS.gene36755:CDS | 25.0% |
!! | TGTTTAAAACATCATGGAAT+GGG | + | chr8.2:78790494-78790513 | None:intergenic | 25.0% |
!!! | GATTATTTCTGATATTTCCT+TGG | - | chr8.2:78791310-78791329 | MS.gene36755:CDS | 25.0% |
!!! | GTTTTGTTCTAATTACTACT+TGG | - | chr8.2:78790777-78790796 | MS.gene36755:intron | 25.0% |
!!! | TTTTGTCCATTCTTTTTTCA+TGG | + | chr8.2:78790359-78790378 | None:intergenic | 25.0% |
CAAAACTTAACCTTAGTTGT+TGG | + | chr8.2:78790642-78790661 | None:intergenic | 30.0% | |
TCTCAAAATTCAGATCTACA+AGG | - | chr8.2:78790947-78790966 | MS.gene36755:intron | 30.0% | |
TTCTTGAAAAAGCAATTCAC+GGG | + | chr8.2:78790835-78790854 | None:intergenic | 30.0% | |
! | GTGTTTAAAACATCATGGAA+TGG | + | chr8.2:78790495-78790514 | None:intergenic | 30.0% |
! | TAATTGTTGTAGAGCTTTGT+AGG | + | chr8.2:78790221-78790240 | None:intergenic | 30.0% |
!! | AAGAGTCATCATTTTTGACA+TGG | + | chr8.2:78789701-78789720 | None:intergenic | 30.0% |
!! | CATGTATTTTTATTGCCTAC+AGG | - | chr8.2:78791130-78791149 | MS.gene36755:CDS | 30.0% |
!! | CTAATTACTACTTGGTAATG+TGG | - | chr8.2:78790785-78790804 | MS.gene36755:intron | 30.0% |
AAAAATCAGAAGAAGAGGAC+CGG | - | chr8.2:78789529-78789548 | MS.gene36755:CDS | 35.0% | |
AAGCAAGCAAAGTAGTGAAT+TGG | + | chr8.2:78790904-78790923 | None:intergenic | 35.0% | |
ACAATGAAACCAAACGACAT+GGG | + | chr8.2:78790561-78790580 | None:intergenic | 35.0% | |
ACGACAAAAATCAGAAGAAG+AGG | - | chr8.2:78789524-78789543 | MS.gene36755:CDS | 35.0% | |
ATGAGACAATTAGGAACACT+TGG | + | chr8.2:78791188-78791207 | None:intergenic | 35.0% | |
CTTAACCAGCTCTTATGAAA+TGG | - | chr8.2:78791017-78791036 | MS.gene36755:intron | 35.0% | |
GTAATCCATTTCATAAGAGC+TGG | + | chr8.2:78791025-78791044 | None:intergenic | 35.0% | |
TCAACAAATGACATCTCATC+TGG | + | chr8.2:78791254-78791273 | None:intergenic | 35.0% | |
TCTTGAAAAAGCAATTCACG+GGG | + | chr8.2:78790834-78790853 | None:intergenic | 35.0% | |
TGATATTTCCTTGGACCAAA+GGG | - | chr8.2:78791319-78791338 | MS.gene36755:CDS | 35.0% | |
TGTCTGGTAAACTACTAATC+CGG | + | chr8.2:78789551-78789570 | None:intergenic | 35.0% | |
TTTGAGTAGTCCAACAACTA+AGG | - | chr8.2:78790629-78790648 | MS.gene36755:CDS | 35.0% | |
! | CAAAGTTAGATGTTTTGTCC+CGG | + | chr8.2:78790613-78790632 | None:intergenic | 35.0% |
! | GTTGAGCATGTTTTGCAAAA+AGG | - | chr8.2:78791269-78791288 | MS.gene36755:CDS | 35.0% |
! | TCTGCGTGTTTAAAACATCA+TGG | + | chr8.2:78790500-78790519 | None:intergenic | 35.0% |
!! | ATTTTGAGAACTTGAAGCAC+AGG | + | chr8.2:78790936-78790955 | None:intergenic | 35.0% |
!! | TCTTAAGTATTGGTGCTATG+TGG | - | chr8.2:78790125-78790144 | MS.gene36755:intron | 35.0% |
AAACATCATGGAATGGGCAT+TGG | + | chr8.2:78790488-78790507 | None:intergenic | 40.0% | |
AACATCATGGAATGGGCATT+GGG | + | chr8.2:78790487-78790506 | None:intergenic | 40.0% | |
AACCCACCTGTTAACTGAAT+CGG | + | chr8.2:78789850-78789869 | None:intergenic | 40.0% | |
AGGTGCGATATGAGACAATT+AGG | + | chr8.2:78791197-78791216 | None:intergenic | 40.0% | |
CATCTAGGAGCTTGAGTAAT+GGG | + | chr8.2:78790584-78790603 | None:intergenic | 40.0% | |
CTGATATTTCCTTGGACCAA+AGG | - | chr8.2:78791318-78791337 | MS.gene36755:CDS | 40.0% | |
GACAATGAAACCAAACGACA+TGG | + | chr8.2:78790562-78790581 | None:intergenic | 40.0% | |
GACTTCTTTGCTGACAATGA+CGG | - | chr8.2:78790408-78790427 | MS.gene36755:CDS | 40.0% | |
GTTTGTTCCTCAGTATCCAT+GGG | - | chr8.2:78790181-78790200 | MS.gene36755:intron | 40.0% | |
TAGTGAATTGGAGTTAACCC+AGG | + | chr8.2:78790892-78790911 | None:intergenic | 40.0% | |
TGTTTGTTCCTCAGTATCCA+TGG | - | chr8.2:78790180-78790199 | MS.gene36755:intron | 40.0% | |
! | AAAGAAGTCCAGCCTTTTCA+AGG | + | chr8.2:78790397-78790416 | None:intergenic | 40.0% |
! | ATGTCAAGGTACTCAAGATG+AGG | + | chr8.2:78790462-78790481 | None:intergenic | 40.0% |
! | GGTGCGTTAATTTCAAGTGA+AGG | + | chr8.2:78790441-78790460 | None:intergenic | 40.0% |
!! | TTGGTAATGTGGACAAACAG+TGG | - | chr8.2:78790796-78790815 | MS.gene36755:intron | 40.0% |
AAGGTGAAGTTCCTCGAGAT+GGG | + | chr8.2:78789889-78789908 | None:intergenic | 45.0% | |
ACATCCCACCTACCTTGAAA+AGG | - | chr8.2:78790382-78790401 | MS.gene36755:CDS | 45.0% | |
ACGTGAGTTGTCATCGACAA+CGG | + | chr8.2:78789826-78789845 | None:intergenic | 45.0% | |
CAAACGACATGGGATAGAGA+TGG | + | chr8.2:78790551-78790570 | None:intergenic | 45.0% | |
CAATTAGGAACACTTGGCTG+TGG | + | chr8.2:78791182-78791201 | None:intergenic | 45.0% | |
CATCATCGAAAACTAGCACC+TGG | + | chr8.2:78789671-78789690 | None:intergenic | 45.0% | |
CATCTCTATCCCATGTCGTT+TGG | - | chr8.2:78790549-78790568 | MS.gene36755:CDS | 45.0% | |
GAATGTCGTACTTCTCCCTT+TGG | + | chr8.2:78791337-78791356 | None:intergenic | 45.0% | |
GAATTGTCCCATGGATACTG+AGG | + | chr8.2:78790191-78790210 | None:intergenic | 45.0% | |
GATGAGATGCATCTTCCGAA+TGG | + | chr8.2:78789793-78789812 | None:intergenic | 45.0% | |
GCATCTAGGAGCTTGAGTAA+TGG | + | chr8.2:78790585-78790604 | None:intergenic | 45.0% | |
GCCTGAGTAAAACGAGGTTA+GGG | + | chr8.2:78789980-78789999 | None:intergenic | 45.0% | |
GGTTTACACGAATTGTCCCA+TGG | + | chr8.2:78790200-78790219 | None:intergenic | 45.0% | |
TCTATCAATGCACTCCTCTG+TGG | - | chr8.2:78790294-78790313 | MS.gene36755:CDS | 45.0% | |
TGCCTGAGTAAAACGAGGTT+AGG | + | chr8.2:78789981-78790000 | None:intergenic | 45.0% | |
TGTGGAGCCCATCCTAAAAT+TGG | + | chr8.2:78791164-78791183 | None:intergenic | 45.0% | |
TTCTTTGCTGACAATGACGG+TGG | - | chr8.2:78790411-78790430 | MS.gene36755:CDS | 45.0% | |
! | ACTCAGAAGCTTCGCTGTTT+TGG | - | chr8.2:78789731-78789750 | MS.gene36755:CDS | 45.0% |
! | ATTTAGAGCTCATGCTGACC+TGG | - | chr8.2:78790871-78790890 | MS.gene36755:intron | 45.0% |
! | TGTAAGTTGGCACATTCCAG+AGG | + | chr8.2:78791387-78791406 | None:intergenic | 45.0% |
! | TTTAGAGCTCATGCTGACCT+GGG | - | chr8.2:78790872-78790891 | MS.gene36755:intron | 45.0% |
!! | AAGTCCAGCCTTTTCAAGGT+AGG | + | chr8.2:78790393-78790412 | None:intergenic | 45.0% |
!! | AGCAGCCACCAATTTTAGGA+TGG | - | chr8.2:78791153-78791172 | MS.gene36755:CDS | 45.0% |
!! | ATGGGCATTGGGTAATGTCA+AGG | + | chr8.2:78790476-78790495 | None:intergenic | 45.0% |
!! | TGCCGATTCAGTTAACAGGT+GGG | - | chr8.2:78789845-78789864 | MS.gene36755:intron | 45.0% |
!!! | GCAGCCACCAATTTTAGGAT+GGG | - | chr8.2:78791154-78791173 | MS.gene36755:CDS | 45.0% |
AAGCGTGCCTGAGTAAAACG+AGG | + | chr8.2:78789986-78790005 | None:intergenic | 50.0% | |
AAGCTCCTAGATGCTCTGTC+CGG | - | chr8.2:78790591-78790610 | MS.gene36755:CDS | 50.0% | |
AAGTGAAGAGGTTCAGAGGG+AGG | + | chr8.2:78789956-78789975 | None:intergenic | 50.0% | |
ACACCTTTGGCAGAATCTCC+AGG | - | chr8.2:78789650-78789669 | MS.gene36755:CDS | 50.0% | |
AGGTGAAGTTCCTCGAGATG+GGG | + | chr8.2:78789888-78789907 | None:intergenic | 50.0% | |
CAAGGTGAAGTTCCTCGAGA+TGG | + | chr8.2:78789890-78789909 | None:intergenic | 50.0% | |
CACGCAGAACTTGCACAATG+TGG | - | chr8.2:78790512-78790531 | MS.gene36755:CDS | 50.0% | |
CGTTGTCTGAACGGAGATCA+AGG | + | chr8.2:78789908-78789927 | None:intergenic | 50.0% | |
GATCTCCGTTCAGACAACGT+CGG | - | chr8.2:78789909-78789928 | MS.gene36755:intron | 50.0% | |
GGAGCCCATCCTAAAATTGG+TGG | + | chr8.2:78791161-78791180 | None:intergenic | 50.0% | |
GGCAAGTGAAGAGGTTCAGA+GGG | + | chr8.2:78789959-78789978 | None:intergenic | 50.0% | |
GTACTTCTCCCTTTGGTCCA+AGG | + | chr8.2:78791330-78791349 | None:intergenic | 50.0% | |
TAGACAGCTGGTGGAAACCA+CGG | + | chr8.2:78789616-78789635 | None:intergenic | 50.0% | |
TCAAATGTGTCAAGGGCCTC+TGG | - | chr8.2:78791368-78791387 | MS.gene36755:CDS | 50.0% | |
TCAGACAACGTCGGCAACAT+CGG | - | chr8.2:78789918-78789937 | MS.gene36755:intron | 50.0% | |
TGGTTGAGCAGCACATTGTC+TGG | + | chr8.2:78789567-78789586 | None:intergenic | 50.0% | |
TGTTGCCGACGTTGTCTGAA+CGG | + | chr8.2:78789917-78789936 | None:intergenic | 50.0% | |
TTGCTGACAATGACGGTGGT+GGG | - | chr8.2:78790415-78790434 | MS.gene36755:CDS | 50.0% | |
TTTGCTGACAATGACGGTGG+TGG | - | chr8.2:78790414-78790433 | MS.gene36755:CDS | 50.0% | |
! | AAATTGGTGGCTGCTCCTGT+AGG | + | chr8.2:78791148-78791167 | None:intergenic | 50.0% |
! | CAGGAGCAGCCACCAATTTT+AGG | - | chr8.2:78791149-78791168 | MS.gene36755:CDS | 50.0% |
! | GCCCTAACCTCGTTTTACTC+AGG | - | chr8.2:78789976-78789995 | MS.gene36755:CDS | 50.0% |
!! | CACGTGCCGATTCAGTTAAC+AGG | - | chr8.2:78789841-78789860 | MS.gene36755:intron | 50.0% |
!! | CCAGCCTTTTCAAGGTAGGT+GGG | + | chr8.2:78790389-78790408 | None:intergenic | 50.0% |
!! | GTGCCGATTCAGTTAACAGG+TGG | - | chr8.2:78789844-78789863 | MS.gene36755:intron | 50.0% |
!! | GTGGAAACCACGGTTTTGGT+CGG | + | chr8.2:78789606-78789625 | None:intergenic | 50.0% |
!! | TCCAGCCTTTTCAAGGTAGG+TGG | + | chr8.2:78790390-78790409 | None:intergenic | 50.0% |
!! | TGGAAACCACGGTTTTGGTC+GGG | + | chr8.2:78789605-78789624 | None:intergenic | 50.0% |
AGCTCCTAGATGCTCTGTCC+GGG | - | chr8.2:78790592-78790611 | MS.gene36755:CDS | 55.0% | |
CCCACCTACCTTGAAAAGGC+TGG | - | chr8.2:78790386-78790405 | MS.gene36755:CDS | 55.0% | |
CGAGGTTAGGGCAAGTGAAG+AGG | + | chr8.2:78789968-78789987 | None:intergenic | 55.0% | |
CTATGTTTGGGCAGCCACAG+AGG | + | chr8.2:78790311-78790330 | None:intergenic | 55.0% | |
GAGGATTACGGAGGAGGGAA+AGG | + | chr8.2:78789767-78789786 | None:intergenic | 55.0% | |
GAGGTTCAGAGGGAGGTTGA+AGG | + | chr8.2:78789949-78789968 | None:intergenic | 55.0% | |
GCACCTGGAGATTCTGCCAA+AGG | + | chr8.2:78789656-78789675 | None:intergenic | 55.0% | |
GGGCAAGTGAAGAGGTTCAG+AGG | + | chr8.2:78789960-78789979 | None:intergenic | 55.0% | |
GTGGACAAACAGTGGCTGCT+TGG | - | chr8.2:78790804-78790823 | MS.gene36755:intron | 55.0% | |
TCCGAATGGCGCGAGGATTA+CGG | + | chr8.2:78789779-78789798 | None:intergenic | 55.0% | |
TCCGTAATCCTCGCGCCATT+CGG | - | chr8.2:78789775-78789794 | MS.gene36755:intron | 55.0% | |
! | GCTGGTGGAAACCACGGTTT+TGG | + | chr8.2:78789610-78789629 | None:intergenic | 55.0% |
! | TTGTCCCGGACAGAGCATCT+AGG | + | chr8.2:78790599-78790618 | None:intergenic | 55.0% |
!! | AAACCACGGTTTTGGTCGGG+AGG | + | chr8.2:78789602-78789621 | None:intergenic | 55.0% |
CCACCAGCTGTCTATCTCGC+CGG | - | chr8.2:78789622-78789641 | MS.gene36755:CDS | 60.0% | |
CTCGAGATGGGGCCCAATGA+CGG | + | chr8.2:78789877-78789896 | None:intergenic | 60.0% | |
GAATGGCGCGAGGATTACGG+AGG | + | chr8.2:78789776-78789795 | None:intergenic | 60.0% | |
TGCATCTTCCGAATGGCGCG+AGG | + | chr8.2:78789786-78789805 | None:intergenic | 60.0% | |
! | AGGTGGGTTCGTGCCGTCAT+TGG | - | chr8.2:78789861-78789880 | MS.gene36755:intron | 60.0% |
! | GGTGGGTTCGTGCCGTCATT+GGG | - | chr8.2:78789862-78789881 | MS.gene36755:intron | 60.0% |
!! | TCTGCCAAAGGTGTCGCCAC+CGG | + | chr8.2:78789644-78789663 | None:intergenic | 60.0% |
!! | TTTTGGTCGGGAGGCGTGAG+AGG | + | chr8.2:78789593-78789612 | None:intergenic | 60.0% |
ACGCCTCCCGACCAAAACCG+TGG | - | chr8.2:78789596-78789615 | MS.gene36755:CDS | 65.0% | |
CCACCGGCGAGATAGACAGC+TGG | + | chr8.2:78789628-78789647 | None:intergenic | 65.0% | |
CCAGCTGTCTATCTCGCCGG+TGG | - | chr8.2:78789625-78789644 | MS.gene36755:CDS | 65.0% | |
CCGGCGAGATAGACAGCTGG+TGG | + | chr8.2:78789625-78789644 | None:intergenic | 65.0% | |
CGTCATTGGGCCCCATCTCG+AGG | - | chr8.2:78789875-78789894 | MS.gene36755:intron | 65.0% | |
GGCGCGAGGATTACGGAGGA+GGG | + | chr8.2:78789772-78789791 | None:intergenic | 65.0% | |
TGGCGCGAGGATTACGGAGG+AGG | + | chr8.2:78789773-78789792 | None:intergenic | 65.0% | |
! | TCGGGAGGCGTGAGAGGATG+TGG | + | chr8.2:78789587-78789606 | None:intergenic | 65.0% |
CTCGCCGGTGGCGACACCTT+TGG | - | chr8.2:78789637-78789656 | MS.gene36755:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 78789498 | 78791415 | 78789498 | ID=MS.gene36755 |
chr8.2 | mRNA | 78789498 | 78791415 | 78789498 | ID=MS.gene36755.t1;Parent=MS.gene36755 |
chr8.2 | exon | 78791051 | 78791415 | 78791051 | ID=MS.gene36755.t1.exon1;Parent=MS.gene36755.t1 |
chr8.2 | CDS | 78791051 | 78791415 | 78791051 | ID=cds.MS.gene36755.t1;Parent=MS.gene36755.t1 |
chr8.2 | exon | 78790263 | 78790719 | 78790263 | ID=MS.gene36755.t1.exon2;Parent=MS.gene36755.t1 |
chr8.2 | CDS | 78790263 | 78790719 | 78790263 | ID=cds.MS.gene36755.t1;Parent=MS.gene36755.t1 |
chr8.2 | exon | 78789945 | 78790097 | 78789945 | ID=MS.gene36755.t1.exon3;Parent=MS.gene36755.t1 |
chr8.2 | CDS | 78789945 | 78790097 | 78789945 | ID=cds.MS.gene36755.t1;Parent=MS.gene36755.t1 |
chr8.2 | exon | 78789498 | 78789761 | 78789498 | ID=MS.gene36755.t1.exon4;Parent=MS.gene36755.t1 |
chr8.2 | CDS | 78789498 | 78789761 | 78789498 | ID=cds.MS.gene36755.t1;Parent=MS.gene36755.t1 |
Gene Sequence |
Protein sequence |