AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene36806

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36806.t1 MTR_8g014260 47.397 365 150 13 1 332 96 451 7.50e-85 263
MS.gene36806.t1 MTR_4g024710 48.837 301 129 8 46 332 58 347 4.47e-76 237
MS.gene36806.t1 MTR_8g014160 43.056 360 117 10 1 332 126 425 5.56e-72 229
MS.gene36806.t1 MTR_8g445780 46.465 297 122 9 18 287 104 390 9.46e-67 215
MS.gene36806.t1 MTR_4g024745 50.190 263 110 6 66 315 29 283 3.25e-66 210
MS.gene36806.t1 MTR_8g014210 53.448 232 89 6 114 332 6 231 4.31e-63 200
MS.gene36806.t1 MTR_2g083840 43.324 367 162 14 1 332 102 457 2.04e-62 205
MS.gene36806.t1 MTR_8g467800 39.943 348 158 12 14 323 109 443 1.63e-57 192
MS.gene36806.t1 MTR_8g468810 41.096 365 161 15 1 326 107 456 6.07e-56 189
MS.gene36806.t1 MTR_8g062270 42.363 347 145 16 18 326 118 447 1.55e-54 185
MS.gene36806.t1 MTR_8g058970 40.970 371 158 13 1 320 101 461 2.72e-54 184
MS.gene36806.t1 MTR_8g062310 37.647 340 173 12 13 332 108 428 6.41e-54 182
MS.gene36806.t1 MTR_8g469020 38.462 377 174 15 2 332 87 451 2.27e-53 182
MS.gene36806.t1 MTR_8g468840 42.604 338 145 13 2 303 98 422 6.75e-52 177
MS.gene36806.t1 MTR_5g092960 41.787 347 148 16 18 323 119 452 1.71e-51 177
MS.gene36806.t1 MTR_8g070950 38.793 348 156 15 20 332 109 434 1.80e-51 176
MS.gene36806.t1 MTR_8g077460 35.522 335 158 9 3 332 94 375 1.06e-48 167
MS.gene36806.t1 MTR_8g058965 39.444 360 162 14 17 332 109 456 1.14e-48 169
MS.gene36806.t1 MTR_4g032730 39.607 356 145 15 2 304 101 439 1.43e-48 169
MS.gene36806.t1 MTR_8g062080 36.023 347 172 12 10 328 115 439 1.60e-48 169
MS.gene36806.t1 MTR_8g062010 38.889 342 172 14 14 332 103 430 4.25e-46 162
MS.gene36806.t1 MTR_8g014230 76.087 92 22 0 241 332 13 104 2.68e-44 147
MS.gene36806.t1 MTR_4g050250 37.107 318 134 11 13 279 117 419 2.90e-38 141
MS.gene36806.t1 MTR_4g113810 49.143 175 57 6 1 150 1 168 4.25e-38 134
MS.gene36806.t1 MTR_8g468810 40.714 280 117 13 1 246 107 371 7.21e-36 133
MS.gene36806.t1 MTR_8g468760 36.667 360 144 16 2 323 96 409 5.17e-35 132
MS.gene36806.t1 MTR_8g062300 33.243 370 180 15 16 332 122 477 1.09e-33 129
MS.gene36806.t1 MTR_5g092960 41.667 264 108 13 18 246 119 371 3.58e-31 121
MS.gene36806.t1 MTR_2g086020 33.544 316 131 12 12 323 65 305 9.75e-26 105
MS.gene36806.t1 MTR_8g467790 30.667 300 147 11 2 279 234 494 6.51e-25 105
MS.gene36806.t1 MTR_8g467800 37.915 211 92 8 14 195 109 309 9.84e-24 100
MS.gene36806.t1 MTR_8g468810 37.668 223 97 10 1 195 107 315 3.15e-23 98.2
MS.gene36806.t1 MTR_8g468810 37.668 223 97 10 1 195 107 315 3.83e-23 98.2
MS.gene36806.t1 MTR_8g468810 37.668 223 97 10 1 195 107 315 3.94e-23 98.6
MS.gene36806.t1 MTR_8g014220 48.182 110 27 4 3 91 60 160 1.48e-18 82.0
MS.gene36806.t1 MTR_5g084070 32.203 236 143 9 75 301 167 394 9.55e-17 80.9
MS.gene36806.t1 MTR_7g056433 27.152 302 164 11 47 332 128 389 6.22e-15 75.5
MS.gene36806.t1 MTR_7g098510 28.223 287 138 11 60 332 159 391 1.37e-14 74.3
MS.gene36806.t1 MTR_7g098570 27.660 282 133 10 60 326 161 386 7.76e-14 72.4
MS.gene36806.t1 MTR_1g041245 31.579 190 104 4 167 330 194 383 6.31e-13 69.3
MS.gene36806.t1 MTR_3g115430 39.091 110 63 3 225 332 18 125 1.49e-12 64.3
MS.gene36806.t1 MTR_3g108150 35.606 132 76 4 209 331 255 386 5.96e-12 66.2
MS.gene36806.t1 MTR_5g080710 32.159 227 137 10 84 301 202 420 6.23e-12 66.6
MS.gene36806.t1 MTR_5g012840 39.370 127 73 2 210 332 192 318 7.11e-12 65.9
MS.gene36806.t1 MTR_7g034115 34.109 129 77 2 198 318 240 368 7.68e-12 66.2
MS.gene36806.t1 MTR_7g032370 29.237 236 140 6 118 332 123 352 9.77e-12 65.5
MS.gene36806.t1 MTR_7g098480 26.710 307 137 12 50 326 134 382 4.35e-11 63.9
MS.gene36806.t1 MTR_7g032380 33.835 133 79 3 209 332 224 356 5.79e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36806.t1 AT1G32375 27.401 354 195 17 19 332 91 422 1.07e-16 80.9
MS.gene36806.t1 AT1G32375 27.401 354 195 17 19 332 91 422 1.07e-16 80.9
MS.gene36806.t1 AT4G26340 27.875 287 171 10 66 332 149 419 6.52e-16 78.6
MS.gene36806.t1 AT3G50710 29.630 270 143 12 62 305 149 397 3.37e-12 67.4

Find 65 sgRNAs with CRISPR-Local

Find 108 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACGTCACCGAATCTGATT+TGG 0.267198 8.3:+74652919 None:intergenic
ATTCTACCATTTACTTCATT+TGG 0.271140 8.3:-74652400 MS.gene36806:CDS
TGAAGTAAATGGTAGAATTC+TGG 0.292814 8.3:+74652405 None:intergenic
ATTAAGAATGTTGAACTTGT+TGG 0.347215 8.3:+74651879 None:intergenic
TATCAAGAGTTTCTAGAATA+GGG 0.352373 8.3:+74653072 None:intergenic
AAGCTCCTCAATGCTCTCTC+TGG 0.354532 8.3:-74652813 MS.gene36806:CDS
TGAGTTCCAAATGAAGTAAA+TGG 0.358963 8.3:+74652394 None:intergenic
CTTTAAACTGAATAAAAGTT+AGG 0.359295 8.3:+74652004 None:intergenic
CAACCAGAGAGGAGGGTGAT+AGG 0.380691 8.3:+74653321 None:intergenic
ACATGGATCCGCACTGTCAC+TGG 0.381583 8.3:-74653414 MS.gene36806:CDS
AGGTGTGATATGATACAATT+AGG 0.381715 8.3:+74652024 None:intergenic
GAATGTTGAACTTGTTGGTT+AGG 0.386216 8.3:+74651884 None:intergenic
GCTGAGTATATCCTGCAAAA+AGG 0.391662 8.3:-74651949 MS.gene36806:CDS
TCAGCAAATAATAGCTCATC+TGG 0.395698 8.3:+74651967 None:intergenic
GTATCAAGAGTTTCTAGAAT+AGG 0.423250 8.3:+74653071 None:intergenic
ATTCAGTTTAAAGGATATCA+AGG 0.428602 8.3:-74651994 MS.gene36806:CDS
AGTTCCATCCCTTCTCACTT+TGG 0.428990 8.3:+74651849 None:intergenic
CTGCCTATCACCCTCCTCTC+TGG 0.429279 8.3:-74653324 MS.gene36806:CDS
AACGTCACCGAATCTGATTT+GGG 0.463568 8.3:+74652920 None:intergenic
AAATGGTAGAATTCTGGAAA+AGG 0.476720 8.3:+74652411 None:intergenic
TCTGGAAAAGGTAGATCAGC+AGG 0.480321 8.3:+74652423 None:intergenic
GGGATAAAACATCTAGTGTT+GGG 0.482880 8.3:-74652792 MS.gene36806:CDS
CACCGAATCTGATTTGGGTC+AGG 0.490189 8.3:+74652925 None:intergenic
AAGATCGCCAACAAGAAAAT+CGG 0.493596 8.3:+74653025 None:intergenic
CAGAGAGGAGGGTGATAGGC+AGG 0.495258 8.3:+74653325 None:intergenic
TGGGATAAAACATCTAGTGT+TGG 0.502631 8.3:-74652793 MS.gene36806:CDS
CATGGATCCGCACTGTCACT+GGG 0.505010 8.3:-74653413 MS.gene36806:CDS
TCGAGGAATTCGTTCATTTG+AGG 0.523451 8.3:+74653101 None:intergenic
AGCCTGACCCAAATCAGATT+CGG 0.524535 8.3:-74652927 MS.gene36806:CDS
AGCTCCTCAATGCTCTCTCT+GGG 0.530368 8.3:-74652812 MS.gene36806:CDS
GGAGGTCGAGTTCCTTGAGG+TGG 0.539371 8.3:+74653388 None:intergenic
ATTTGGAACTCATTCTTCCG+TGG 0.540093 8.3:-74652383 MS.gene36806:CDS
TTGTCCAAAGTGAGAAGGGA+TGG 0.550405 8.3:-74651853 MS.gene36806:CDS
TGTCACTGGGCCCCACCTCA+AGG 0.552924 8.3:-74653400 MS.gene36806:CDS
TAAGTTGTCCAAAGTGAGAA+GGG 0.553575 8.3:-74651857 MS.gene36806:CDS
GAGGTCGAGTTCCTTGAGGT+GGG 0.553889 8.3:+74653389 None:intergenic
GATTATTGATGATATTTCAG+TGG 0.558139 8.3:-74651908 MS.gene36806:CDS
ACTTTCAACTTCTTTAGTGA+CGG 0.562277 8.3:+74653140 None:intergenic
GTGTGCCACCTACGTTGAAG+AGG 0.565380 8.3:-74653001 MS.gene36806:CDS
ATGATACAATTAGGAACACT+TGG 0.569360 8.3:+74652033 None:intergenic
ATAAGTTGTCCAAAGTGAGA+AGG 0.572096 8.3:-74651858 MS.gene36806:CDS
TTCAACCTCTTCAACGTAGG+TGG 0.575803 8.3:+74652996 None:intergenic
GATTAGTGCAACCAGAGAGG+AGG 0.577689 8.3:+74653313 None:intergenic
GCATAGATTCAGTCGACACA+TGG 0.580795 8.3:-74653431 MS.gene36806:CDS
AAAGAATGATATCCTGAGGA+AGG 0.582109 8.3:+74652855 None:intergenic
ATTAGTGCAACCAGAGAGGA+GGG 0.582145 8.3:+74653314 None:intergenic
AAAATCGCATTTAGCAGGAT+GGG 0.585235 8.3:-74652064 MS.gene36806:CDS
TATCGTCGACATCGAGTAGG+AGG 0.600575 8.3:+74653370 None:intergenic
AAAGTGAGAAGGGATGGAAC+TGG 0.606629 8.3:-74651847 MS.gene36806:CDS
CAAATCAGATTCGGTGACGT+TGG 0.610035 8.3:-74652918 MS.gene36806:CDS
CAAATGAACGAATTCCTCGA+TGG 0.610797 8.3:-74653098 MS.gene36806:CDS
GTTGGGTTGTTCAACAACAA+AGG 0.612560 8.3:-74652775 MS.gene36806:intron
CATTATCGTCGACATCGAGT+AGG 0.627318 8.3:+74653367 None:intergenic
CGTTGGCAACTTACAAAATG+TGG 0.627320 8.3:-74652901 MS.gene36806:CDS
AGAAAATTCGAGTTGAACCA+CGG 0.632227 8.3:+74652366 None:intergenic
GAGAAAAGAATGATATCCTG+AGG 0.632970 8.3:+74652851 None:intergenic
TCTCATAATTCAAAATGACA+AGG 0.638347 8.3:-74652307 MS.gene36806:intron
GTAGGAGGTCGAGTTCCTTG+AGG 0.641668 8.3:+74653385 None:intergenic
CGAGATTAGTGCAACCAGAG+AGG 0.650398 8.3:+74653310 None:intergenic
CTAGAATAGGGCAGCCATCG+AGG 0.654045 8.3:+74653084 None:intergenic
TTATCCCAGAGAGAGCATTG+AGG 0.659136 8.3:+74652808 None:intergenic
AGGTCGAGTTCCTTGAGGTG+GGG 0.660276 8.3:+74653390 None:intergenic
CTGGAAAAGGTAGATCAGCA+GGG 0.691970 8.3:+74652424 None:intergenic
GGTGGGGCCCAGTGACAGTG+CGG 0.692826 8.3:+74653406 None:intergenic
AGGCTAAGATAGTATATACG+AGG 0.726988 8.3:+74652945 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTCAATAAATATATCACTA+TGG + chr8.3:74652116-74652135 None:intergenic 15.0%
!!! TTGATACTTACTTTTTTTAT+GGG - chr8.3:74652247-74652266 MS.gene36806:intron 15.0%
!! ATAAAGAACATTCGAAATTA+TGG - chr8.3:74652784-74652803 MS.gene36806:CDS 20.0%
!! CAATAATATCACTAAAGATT+AGG + chr8.3:74652758-74652777 None:intergenic 20.0%
!! CTAATCTTTAGTGATATTAT+TGG - chr8.3:74652756-74652775 MS.gene36806:intron 20.0%
!! CTTTAAACTGAATAAAAGTT+AGG + chr8.3:74653301-74653320 None:intergenic 20.0%
!!! CTAACTTTTATTCAGTTTAA+AGG - chr8.3:74653299-74653318 MS.gene36806:intron 20.0%
!!! CTTGATACTTACTTTTTTTA+TGG - chr8.3:74652246-74652265 MS.gene36806:intron 20.0%
!!! GAGTTTTAATGTTTGTTTAA+TGG - chr8.3:74653024-74653043 MS.gene36806:CDS 20.0%
!!! TTGAAAATCAATTTTGATAC+TGG - chr8.3:74652324-74652343 MS.gene36806:CDS 20.0%
! AATATCACTAAAGATTAGGT+TGG + chr8.3:74652754-74652773 None:intergenic 25.0%
! AATATGACTAACAATAATCC+TGG - chr8.3:74652676-74652695 MS.gene36806:intron 25.0%
! ATATCACTAAAGATTAGGTT+GGG + chr8.3:74652753-74652772 None:intergenic 25.0%
! ATATGACTAACAATAATCCT+GGG - chr8.3:74652677-74652696 MS.gene36806:intron 25.0%
! ATTAAGAATGTTGAACTTGT+TGG + chr8.3:74653426-74653445 None:intergenic 25.0%
! ATTCAGTTTAAAGGATATCA+AGG - chr8.3:74653308-74653327 MS.gene36806:intron 25.0%
! ATTCTACCATTTACTTCATT+TGG - chr8.3:74652902-74652921 MS.gene36806:CDS 25.0%
! CAATAAATATATCACTATGG+AGG + chr8.3:74652113-74652132 None:intergenic 25.0%
! GGATTATTGTTAGTCATATT+AGG + chr8.3:74652676-74652695 None:intergenic 25.0%
! TCTCATAATTCAAAATGACA+AGG - chr8.3:74652995-74653014 MS.gene36806:CDS 25.0%
! TTAGAAAGTTAATATGTGTG+TGG + chr8.3:74652729-74652748 None:intergenic 25.0%
!! AAAGGTACAGTTTATTATCA+TGG - chr8.3:74652545-74652564 MS.gene36806:intron 25.0%
!! GATTATTGATGATATTTCAG+TGG - chr8.3:74653394-74653413 MS.gene36806:CDS 25.0%
!!! TATCAAGAGTTTCTAGAATA+GGG + chr8.3:74652233-74652252 None:intergenic 25.0%
ACACATATATACACAAGTCT+TGG - chr8.3:74652628-74652647 MS.gene36806:intron 30.0%
ACTTTCAACTTCTTTAGTGA+CGG + chr8.3:74652165-74652184 None:intergenic 30.0%
AGGTGTGATATGATACAATT+AGG + chr8.3:74653281-74653300 None:intergenic 30.0%
ATGATACAATTAGGAACACT+TGG + chr8.3:74653272-74653291 None:intergenic 30.0%
ATGATCTAACGTTGCATATA+TGG + chr8.3:74653184-74653203 None:intergenic 30.0%
GACATCAGTCATTTACAATT+TGG + chr8.3:74652589-74652608 None:intergenic 30.0%
GTACAGTTTATTATCATGGT+TGG - chr8.3:74652549-74652568 MS.gene36806:intron 30.0%
GTTAGATCATATGTATGTTG+TGG - chr8.3:74653194-74653213 MS.gene36806:intron 30.0%
TGAAGTAAATGGTAGAATTC+TGG + chr8.3:74652900-74652919 None:intergenic 30.0%
TGAGTTCCAAATGAAGTAAA+TGG + chr8.3:74652911-74652930 None:intergenic 30.0%
! AAATGGTAGAATTCTGGAAA+AGG + chr8.3:74652894-74652913 None:intergenic 30.0%
!! GTATCAAGAGTTTCTAGAAT+AGG + chr8.3:74652234-74652253 None:intergenic 30.0%
!! TATTGAATCACAACTTGCTA+AGG - chr8.3:74652128-74652147 MS.gene36806:intron 30.0%
!!! AATTACACCGATTTTCTTGT+TGG - chr8.3:74652270-74652289 MS.gene36806:intron 30.0%
!!! TGTTGTTTTGAAAAAACCAG+TGG - chr8.3:74652844-74652863 MS.gene36806:CDS 30.0%
AAAAATCGCATTTAGCAGGA+TGG - chr8.3:74653237-74653256 MS.gene36806:intron 35.0%
AAAATCGCATTTAGCAGGAT+GGG - chr8.3:74653238-74653257 MS.gene36806:intron 35.0%
AAAGAATGATATCCTGAGGA+AGG + chr8.3:74652450-74652469 None:intergenic 35.0%
AAGATCGCCAACAAGAAAAT+CGG + chr8.3:74652280-74652299 None:intergenic 35.0%
AGGCTAAGATAGTATATACG+AGG + chr8.3:74652360-74652379 None:intergenic 35.0%
ATAAGTTGTCCAAAGTGAGA+AGG - chr8.3:74653444-74653463 MS.gene36806:CDS 35.0%
GAGAAAAGAATGATATCCTG+AGG + chr8.3:74652454-74652473 None:intergenic 35.0%
GGGATAAAACATCTAGTGTT+GGG - chr8.3:74652510-74652529 MS.gene36806:intron 35.0%
TAAGTTGTCCAAAGTGAGAA+GGG - chr8.3:74653445-74653464 MS.gene36806:CDS 35.0%
TCAGCAAATAATAGCTCATC+TGG + chr8.3:74653338-74653357 None:intergenic 35.0%
TGGGATAAAACATCTAGTGT+TGG - chr8.3:74652509-74652528 MS.gene36806:intron 35.0%
TTTGAGCATGCATAAAACGA+GGG + chr8.3:74653129-74653148 None:intergenic 35.0%
! ATCTTTTACTCTACTATCCC+AGG + chr8.3:74652697-74652716 None:intergenic 35.0%
! ATTTTCAACCTCTTCAACGT+AGG + chr8.3:74652312-74652331 None:intergenic 35.0%
! CGACGATAATGAATTTTCTG+TGG - chr8.3:74651947-74651966 MS.gene36806:CDS 35.0%
! TAGTCATATTAGGTATTGCG+TGG + chr8.3:74652666-74652685 None:intergenic 35.0%
! TCAAAACAAGTCCTTTTTGC+AGG + chr8.3:74653367-74653386 None:intergenic 35.0%
! TTTTGAGCATGCATAAAACG+AGG + chr8.3:74653130-74653149 None:intergenic 35.0%
!! AGAAAATTCGAGTTGAACCA+CGG + chr8.3:74652939-74652958 None:intergenic 35.0%
!! GAATGTTGAACTTGTTGGTT+AGG + chr8.3:74653421-74653440 None:intergenic 35.0%
AACGTCACCGAATCTGATTT+GGG + chr8.3:74652385-74652404 None:intergenic 40.0%
AATTGAATGTGCTTGCCTGA+GGG + chr8.3:74652021-74652040 None:intergenic 40.0%
CAAATGAACGAATTCCTCGA+TGG - chr8.3:74652204-74652223 MS.gene36806:intron 40.0%
CAGGAAAAATCGCATTTAGC+AGG - chr8.3:74653233-74653252 MS.gene36806:intron 40.0%
CGTTGGCAACTTACAAAATG+TGG - chr8.3:74652401-74652420 MS.gene36806:CDS 40.0%
GCTGAGTATATCCTGCAAAA+AGG - chr8.3:74653353-74653372 MS.gene36806:CDS 40.0%
TCGAGGAATTCGTTCATTTG+AGG + chr8.3:74652204-74652223 None:intergenic 40.0%
! ATTTGGAACTCATTCTTCCG+TGG - chr8.3:74652919-74652938 MS.gene36806:CDS 40.0%
! CTTGATGTTTTTCCTTCCTC+AGG - chr8.3:74652435-74652454 MS.gene36806:CDS 40.0%
! GTTGGGTTGTTCAACAACAA+AGG - chr8.3:74652527-74652546 MS.gene36806:intron 40.0%
!! GTTGTGGTGTCTTTTGTTGT+CGG - chr8.3:74653210-74653229 MS.gene36806:intron 40.0%
AAAAACCAGTGGCTTCTTCG+TGG - chr8.3:74652855-74652874 MS.gene36806:CDS 45.0%
AAAGTGAGAAGGGATGGAAC+TGG - chr8.3:74653455-74653474 MS.gene36806:CDS 45.0%
AGCCTGACCCAAATCAGATT+CGG - chr8.3:74652375-74652394 MS.gene36806:CDS 45.0%
AGTTCCATCCCTTCTCACTT+TGG + chr8.3:74653456-74653475 None:intergenic 45.0%
ATATCACTATGGAGGCTGAG+AGG + chr8.3:74652105-74652124 None:intergenic 45.0%
ATTAGTGCAACCAGAGAGGA+GGG + chr8.3:74651991-74652010 None:intergenic 45.0%
CAACGTCACCGAATCTGATT+TGG + chr8.3:74652386-74652405 None:intergenic 45.0%
CATTATCGTCGACATCGAGT+AGG + chr8.3:74651938-74651957 None:intergenic 45.0%
CTGGAAAAGGTAGATCAGCA+GGG + chr8.3:74652881-74652900 None:intergenic 45.0%
GAATTGAATGTGCTTGCCTG+AGG + chr8.3:74652022-74652041 None:intergenic 45.0%
GCATAGATTCAGTCGACACA+TGG - chr8.3:74651871-74651890 MS.gene36806:CDS 45.0%
TCTGGAAAAGGTAGATCAGC+AGG + chr8.3:74652882-74652901 None:intergenic 45.0%
TTCAACCTCTTCAACGTAGG+TGG + chr8.3:74652309-74652328 None:intergenic 45.0%
TTGTCCAAAGTGAGAAGGGA+TGG - chr8.3:74653449-74653468 MS.gene36806:CDS 45.0%
!! CAAATCAGATTCGGTGACGT+TGG - chr8.3:74652384-74652403 MS.gene36806:CDS 45.0%
!! TTATCCCAGAGAGAGCATTG+AGG + chr8.3:74652497-74652516 None:intergenic 45.0%
AAGCTCCTCAATGCTCTCTC+TGG - chr8.3:74652489-74652508 MS.gene36806:intron 50.0%
AGCTCCTCAATGCTCTCTCT+GGG - chr8.3:74652490-74652509 MS.gene36806:intron 50.0%
CGAGATTAGTGCAACCAGAG+AGG + chr8.3:74651995-74652014 None:intergenic 50.0%
GATTAGTGCAACCAGAGAGG+AGG + chr8.3:74651992-74652011 None:intergenic 50.0%
GCACTAATCTCGTTTCCCTC+AGG - chr8.3:74652003-74652022 MS.gene36806:CDS 50.0%
TATCGTCGACATCGAGTAGG+AGG + chr8.3:74651935-74651954 None:intergenic 50.0%
!! CACCGAATCTGATTTGGGTC+AGG + chr8.3:74652380-74652399 None:intergenic 50.0%
!! TGGTGTCTTTTGTTGTCGGC+AGG - chr8.3:74653214-74653233 MS.gene36806:intron 50.0%
ACATGGATCCGCACTGTCAC+TGG - chr8.3:74651888-74651907 MS.gene36806:CDS 55.0%
AGGTCGAGTTCCTTGAGGTG+GGG + chr8.3:74651915-74651934 None:intergenic 55.0%
CAACCAGAGAGGAGGGTGAT+AGG + chr8.3:74651984-74652003 None:intergenic 55.0%
CATGGATCCGCACTGTCACT+GGG - chr8.3:74651889-74651908 MS.gene36806:CDS 55.0%
CTAGAATAGGGCAGCCATCG+AGG + chr8.3:74652221-74652240 None:intergenic 55.0%
GAGGTCGAGTTCCTTGAGGT+GGG + chr8.3:74651916-74651935 None:intergenic 55.0%
GTAGGAGGTCGAGTTCCTTG+AGG + chr8.3:74651920-74651939 None:intergenic 55.0%
GTGTGCCACCTACGTTGAAG+AGG - chr8.3:74652301-74652320 MS.gene36806:intron 55.0%
CAGAGAGGAGGGTGATAGGC+AGG + chr8.3:74651980-74651999 None:intergenic 60.0%
CTGCCTATCACCCTCCTCTC+TGG - chr8.3:74651978-74651997 MS.gene36806:CDS 60.0%
GGAGGTCGAGTTCCTTGAGG+TGG + chr8.3:74651917-74651936 None:intergenic 60.0%
CAGGGCCACGAAGAAGCCAC+TGG + chr8.3:74652863-74652882 None:intergenic 65.0%
TGTCACTGGGCCCCACCTCA+AGG - chr8.3:74651902-74651921 MS.gene36806:CDS 65.0%
GGTGGGGCCCAGTGACAGTG+CGG + chr8.3:74651899-74651918 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 74651828 74653496 74651828 ID=MS.gene36806
chr8.3 mRNA 74651828 74653496 74651828 ID=MS.gene36806.t1;Parent=MS.gene36806
chr8.3 exon 74653311 74653496 74653311 ID=MS.gene36806.t1.exon1;Parent=MS.gene36806.t1
chr8.3 CDS 74653311 74653496 74653311 ID=cds.MS.gene36806.t1;Parent=MS.gene36806.t1
chr8.3 exon 74652776 74653174 74652776 ID=MS.gene36806.t1.exon2;Parent=MS.gene36806.t1
chr8.3 CDS 74652776 74653174 74652776 ID=cds.MS.gene36806.t1;Parent=MS.gene36806.t1
chr8.3 exon 74652308 74652460 74652308 ID=MS.gene36806.t1.exon3;Parent=MS.gene36806.t1
chr8.3 CDS 74652308 74652460 74652308 ID=cds.MS.gene36806.t1;Parent=MS.gene36806.t1
chr8.3 exon 74651828 74652088 74651828 ID=MS.gene36806.t1.exon4;Parent=MS.gene36806.t1
chr8.3 CDS 74651828 74652088 74651828 ID=cds.MS.gene36806.t1;Parent=MS.gene36806.t1
Gene Sequence

>MS.gene36806

ATGCGTCTGTCGTGTACGAAATTGCTCGTGCAAAACGAATTCTGCATAGATTCAGTCGACACATGGATCCGCACTGTCACTGGGCCCCACCTCAAGGAACTCGACCTCCTACTCGATGTCGACGATAATGAATTTTCTGTGGAATACGACCTGCCTATCACCCTCCTCTCTGGTTGCACTAATCTCGTTTCCCTCAGGCAAGCACATTCAATTCTTTTTTTATAATAGAATTTGTTTTTTTAATTATTATTAAAATTACTTATATTGCTACACTCCTCTCAGCCTCCATAGTGATATATTTATTGAATCACAACTTGCTAAGGATTTTCATTTACCGTCACTAAAGAAGTTGAAAGTCTGTGCTATGAGCATGCCTCAAATGAACGAATTCCTCGATGGCTGCCCTATTCTAGAAACTCTTGATACTTACTTTTTTTATGGGAATTACACCGATTTTCTTGTTGGCGATCTTCGTGTGCCACCTACGTTGAAGAGGTTGAAAATCAATTTTGATACTGGCAGTGTTGCGCCTCGTATATACTATCTTAGCCTGACCCAAATCAGATTCGGTGACGTTGGCAACTTACAAAATGTGGTGAGAGCGTCTCTTGATGTTTTTCCTTCCTCAGGATATCATTCTTTTCTCTTCACTTGTTTAATCAAGCTCCTCAATGCTCTCTCTGGGATAAAACATCTAGTGTTGGGTTGTTCAACAACAAAGGTACAGTTTATTATCATGGTTGGATATAGATATAATACCAAATTGTAAATGACTGATGTCTTTCACTGATAAAATGCGTACACATATATACACAAGTCTTGGAATACAATCAATCCACGCAATACCTAATATGACTAACAATAATCCTGGGATAGTAGAGTAAAAGATATGTACATACCACACACATATTAACTTTCTAATCCCAACCTAATCTTTAGTGATATTATTGGATATCATAAAGAACATTCGAAATTATGGTATAGTGTCTTACTAGCTAATAATACGTCTTACTACTTGTTGTTTTGAAAAAACCAGTGGCTTCTTCGTGGCCCTGCTGATCTACCTTTTCCAGAATTCTACCATTTACTTCATTTGGAACTCATTCTTCCGTGGTTCAACTCGAATTTTCTGCTGAGTTTGCTTCAGACATGTCATCATCTTCAAGTTCTCATAATTCAAAATGACAAGGTTTGATGAGTTTTAATGTTTGTTTAATGGTTTATTTTGCTTCATGTACATCACTTATTGATGTAAAATTGATCAATTCAATGTTCTTATATGAAATAGATTAAACATGCCCTCGTTTTATGCATGCTCAAAATGATCACTATGACATATAACATGATTTATTACCATATATGCAACGTTAGATCATATGTATGTTGTGGTGTCTTTTGTTGTCGGCAGGAAAAATCGCATTTAGCAGGATGGGCTACACAACCAAGTGTTCCTAATTGTATCATATCACACCTAACTTTTATTCAGTTTAAAGGATATCAAGGACTTCCAGATGAGCTATTATTTGCTGAGTATATCCTGCAAAAAGGACTTGTTTTGAAAACAATGATTATTGATGATATTTCAGTGGACCTAACCAACAAGTTCAACATTCTTAATAAGTTGTCCAAAGTGAGAAGGGATGGAACTGGCAAACTTTTATTTGACTGA
Protein sequence

>MS.gene36806.t1

MRLSCTKLLVQNEFCIDSVDTWIRTVTGPHLKELDLLLDVDDNEFSVEYDLPITLLSGCTNLDFHLPSLKKLKVCAMSMPQMNEFLDGCPILETLDTYFFYGNYTDFLVGDLRVPPTLKRLKINFDTGSVAPRIYYLSLTQIRFGDVGNLQNVVRASLDVFPSSGYHSFLFTCLIKLLNALSGIKHLVLGCSTTKWLLRGPADLPFPEFYHLLHLELILPWFNSNFLLSLLQTCHHLQVLIIQNDKEKSHLAGWATQPSVPNCIISHLTFIQFKGYQGLPDELLFAEYILQKGLVLKTMIIDDISVDLTNKFNILNKLSKVRRDGTGKLLFD