AlfalfaGEDB | MS.gene36931

M. sativa cultivar XinJiangDaYe / MS.gene36931

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene36931.t1	AET01504.2	65.8	278	91	3	3	279	177	451	8.70E-91	343.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene36931.t1	Q8H1R7	27.2	287	187	8	2	279	146	419	4.9e-18	93.2

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene36931.t1	G7LGM4	65.8	278	91	3	3	279	177	451	6.3e-91	343.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene36931	MS.gene07664	PPI
MS.gene72955	MS.gene36931	PPI
MS.gene63104	MS.gene36931	PPI
MS.gene36931	MS.gene84248	PPI
MS.gene92611	MS.gene36931	PPI
MS.gene36931	MS.gene007875	PPI
MS.gene053313	MS.gene36931	PPI
MS.gene36931	MS.gene09363	PPI
MS.gene72962	MS.gene36931	PPI
MS.gene36931	MS.gene062526	PPI
MS.gene25396	MS.gene36931	PPI
MS.gene93027	MS.gene36931	PPI
MS.gene34215	MS.gene36931	PPI
MS.gene36931	MS.gene26444	PPI
MS.gene09362	MS.gene36931	PPI
MS.gene36931	MS.gene34736	PPI
MS.gene36931	MS.gene34730	PPI
MS.gene36931	MS.gene25418	PPI
MS.gene48656	MS.gene36931	PPI
MS.gene36931	MS.gene89963	PPI
MS.gene07678	MS.gene36931	PPI
MS.gene63223	MS.gene36931	PPI
MS.gene36931	MS.gene85640	PPI
MS.gene36931	MS.gene60521	PPI
MS.gene072547	MS.gene36931	PPI
MS.gene36931	MS.gene25296	PPI
MS.gene36931	MS.gene050947	PPI
MS.gene72963	MS.gene36931	PPI
MS.gene36931	MS.gene07660	PPI
MS.gene36931	MS.gene03749	PPI
MS.gene056517	MS.gene36931	PPI
MS.gene34735	MS.gene36931	PPI
MS.gene03755	MS.gene36931	PPI
MS.gene09368	MS.gene36931	PPI
MS.gene054411	MS.gene36931	PPI
MS.gene36931	MS.gene073176	PPI
MS.gene36931	MS.gene72952	PPI
MS.gene36931	MS.gene072983	PPI
MS.gene36931	MS.gene050744	PPI
MS.gene63095	MS.gene36931	PPI
MS.gene055880	MS.gene36931	PPI
MS.gene043123	MS.gene36931	PPI
MS.gene25412	MS.gene36931	PPI
MS.gene25410	MS.gene36931	PPI
MS.gene36931	MS.gene72956	PPI
MS.gene07674	MS.gene36931	PPI
MS.gene63185	MS.gene36931	PPI
MS.gene36931	MS.gene03753	PPI
MS.gene36931	MS.gene72961	PPI
MS.gene072985	MS.gene36931	PPI
MS.gene072984	MS.gene36931	PPI
MS.gene36931	MS.gene014792	PPI
MS.gene09364	MS.gene36931	PPI
MS.gene09360	MS.gene36931	PPI
MS.gene25411	MS.gene36931	PPI
MS.gene72959	MS.gene36931	PPI
MS.gene36931	MS.gene07669	PPI
MS.gene36931	MS.gene89961	PPI
MS.gene25414	MS.gene36931	PPI
MS.gene34739	MS.gene36931	PPI
MS.gene34731	MS.gene36931	PPI
MS.gene36931	MS.gene63218	PPI
MS.gene03757	MS.gene36931	PPI
MS.gene36931	MS.gene91201	PPI
MS.gene062282	MS.gene36931	PPI
MS.gene065516	MS.gene36931	PPI
MS.gene36931	MS.gene36065	PPI
MS.gene36931	MS.gene047839	PPI
MS.gene053514	MS.gene36931	PPI
MS.gene03756	MS.gene36931	PPI
MS.gene61631	MS.gene36931	PPI
MS.gene36931	MS.gene09371	PPI
MS.gene48654	MS.gene36931	PPI
MS.gene067702	MS.gene36931	PPI
MS.gene36931	MS.gene07665	PPI
MS.gene63212	MS.gene36931	PPI
MS.gene36931	MS.gene95710	PPI
MS.gene07667	MS.gene36931	PPI
MS.gene64984	MS.gene36931	PPI
MS.gene36931	MS.gene09367	PPI
MS.gene044445	MS.gene36931	PPI
MS.gene36931	MS.gene07659	PPI
MS.gene038427	MS.gene36931	PPI
MS.gene36931	MS.gene09992	PPI
MS.gene03750	MS.gene36931	PPI
MS.gene36931	MS.gene07658	PPI
MS.gene021313	MS.gene36931	PPI
MS.gene63210	MS.gene36931	PPI
MS.gene36931	MS.gene88183	PPI
MS.gene89956	MS.gene36931	PPI
MS.gene36931	MS.gene03748	PPI
MS.gene36931	MS.gene89955	PPI
MS.gene36931	MS.gene34737	PPI
MS.gene065234	MS.gene36931	PPI
MS.gene34753	MS.gene36931	PPI
MS.gene09370	MS.gene36931	PPI
MS.gene36931	MS.gene03760	PPI
MS.gene36931	MS.gene017193	PPI
MS.gene36931	MS.gene060770	PPI
MS.gene03752	MS.gene36931	PPI
MS.gene63224	MS.gene36931	PPI
MS.gene005794	MS.gene36931	PPI
MS.gene84247	MS.gene36931	PPI
MS.gene78146	MS.gene36931	PPI
MS.gene99983	MS.gene36931	PPI
MS.gene36931	MS.gene005795	PPI
MS.gene49513	MS.gene36931	PPI
MS.gene69850	MS.gene36931	PPI
MS.gene72957	MS.gene36931	PPI
MS.gene36931	MS.gene34733	PPI
MS.gene060769	MS.gene36931	PPI
MS.gene36931	MS.gene03758	PPI
MS.gene98269	MS.gene36931	PPI
MS.gene63214	MS.gene36931	PPI
MS.gene36931	MS.gene07666	PPI
MS.gene32588	MS.gene36931	PPI
MS.gene63217	MS.gene36931	PPI
MS.gene07668	MS.gene36931	PPI
MS.gene032296	MS.gene36931	PPI
MS.gene72960	MS.gene36931	PPI
MS.gene36931	MS.gene03759	PPI
MS.gene36931	MS.gene043122	PPI
MS.gene68082	MS.gene36931	PPI
MS.gene36067	MS.gene36931	PPI
MS.gene89957	MS.gene36931	PPI
MS.gene063490	MS.gene36931	PPI
MS.gene98598	MS.gene36931	PPI
MS.gene060771	MS.gene36931	PPI
MS.gene36931	MS.gene92095	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene36931.t1	MTR_4g024710	65.591	279	92	3	2	279	72	347	5.04e-117	340
MS.gene36931.t1	MTR_8g014260	65.827	278	91	3	3	279	177	451	2.66e-116	342
MS.gene36931.t1	MTR_4g024745	64.504	262	89	3	2	262	26	284	7.74e-103	301
MS.gene36931.t1	MTR_8g445780	64.935	231	77	2	3	233	164	390	6.60e-95	285
MS.gene36931.t1	MTR_8g014210	63.636	231	83	1	49	279	2	231	1.08e-94	279
MS.gene36931.t1	MTR_8g077460	65.517	145	50	0	135	279	231	375	2.17e-58	191
MS.gene36931.t1	MTR_8g077460	52.381	63	27	1	3	65	170	229	5.68e-11	62.8
MS.gene36931.t1	MTR_5g092960	44.689	273	132	7	21	278	193	461	1.05e-57	191
MS.gene36931.t1	MTR_8g062270	43.599	289	143	9	1	278	174	453	4.29e-57	189
MS.gene36931.t1	MTR_2g083840	42.908	282	149	7	5	279	181	457	1.18e-55	186
MS.gene36931.t1	MTR_8g468810	41.176	289	151	8	3	279	182	463	7.78e-54	181
MS.gene36931.t1	MTR_8g468840	47.059	255	125	6	3	250	172	423	6.98e-53	178
MS.gene36931.t1	MTR_8g058970	42.808	292	147	9	2	279	192	477	4.19e-51	174
MS.gene36931.t1	MTR_8g467800	41.356	295	145	11	3	279	169	453	1.08e-49	170
MS.gene36931.t1	MTR_8g468760	38.246	285	127	9	5	278	172	418	1.86e-41	147
MS.gene36931.t1	MTR_8g014160	36.299	281	118	6	3	279	202	425	5.47e-41	146
MS.gene36931.t1	MTR_4g032730	38.487	304	148	10	3	278	174	466	3.61e-39	142
MS.gene36931.t1	MTR_8g058965	36.860	293	166	7	2	279	168	456	4.45e-39	142
MS.gene36931.t1	MTR_8g469020	36.149	296	165	11	2	279	162	451	1.92e-38	140
MS.gene36931.t1	MTR_8g062310	35.336	283	154	10	3	279	169	428	3.96e-35	131
MS.gene36931.t1	MTR_8g062010	35.563	284	157	11	5	279	164	430	4.40e-34	128
MS.gene36931.t1	MTR_8g070950	35.531	273	151	10	18	279	176	434	5.44e-34	128
MS.gene36931.t1	MTR_8g014230	65.060	83	29	0	191	273	17	99	6.17e-33	117
MS.gene36931.t1	MTR_8g062080	34.138	290	158	12	2	279	177	445	2.00e-32	124
MS.gene36931.t1	MTR_5g092960	45.304	181	88	4	21	192	193	371	1.12e-31	121
MS.gene36931.t1	MTR_8g468810	40.816	196	104	5	3	192	182	371	4.50e-30	116
MS.gene36931.t1	MTR_8g062300	34.426	305	160	13	1	279	187	477	1.11e-29	117
MS.gene36931.t1	MTR_2g086020	53.509	114	50	3	169	279	202	315	7.76e-28	109
MS.gene36931.t1	MTR_4g050250	34.252	254	123	9	2	225	180	419	1.71e-23	99.4
MS.gene36931.t1	MTR_8g468810	41.667	132	73	2	3	134	182	309	7.39e-21	90.5
MS.gene36931.t1	MTR_8g468810	41.667	132	73	2	3	134	182	309	7.76e-21	90.9
MS.gene36931.t1	MTR_8g468810	41.667	132	73	2	3	134	182	309	9.65e-21	90.9
MS.gene36931.t1	MTR_8g467800	43.919	148	67	7	3	141	169	309	7.04e-17	79.7
MS.gene36931.t1	MTR_5g084070	30.342	234	148	10	21	247	169	394	6.10e-15	74.7
MS.gene36931.t1	MTR_8g467790	31.169	231	103	12	2	221	305	490	3.39e-13	69.7
MS.gene36931.t1	MTR_7g098510	36.364	110	67	2	173	279	282	391	3.21e-12	66.6
MS.gene36931.t1	MTR_1g041245	36.697	109	64	1	176	279	278	386	4.60e-12	65.9
MS.gene36931.t1	MTR_7g032380	31.776	107	70	1	176	279	250	356	1.57e-11	64.3
MS.gene36931.t1	MTR_7g034115	26.957	230	145	5	65	271	146	375	2.53e-11	63.9
MS.gene36931.t1	MTR_5g080710	27.881	269	171	12	22	275	196	456	5.47e-11	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene36931.t1	AT4G26340	27.526	287	186	8	2	279	146	419	1.53e-20	90.9
MS.gene36931.t1	AT3G54910	28.622	283	175	9	5	279	110	373	3.92e-17	80.9
MS.gene36931.t1	AT3G54910	28.622	283	175	9	5	279	110	373	3.92e-17	80.9
MS.gene36931.t1	AT3G54910	28.622	283	175	9	5	279	110	373	3.92e-17	80.9
MS.gene36931.t1	AT1G32375	26.962	293	180	12	2	279	149	422	1.54e-15	76.6
MS.gene36931.t1	AT1G32375	26.962	293	180	12	2	279	149	422	1.54e-15	76.6
MS.gene36931.t1	AT5G56800	27.551	294	166	12	4	278	78	343	9.36e-15	73.6
MS.gene36931.t1	AT3G26920	28.374	289	179	11	3	278	66	339	1.42e-14	73.2
MS.gene36931.t1	AT3G26920	28.374	289	179	11	3	278	66	339	1.42e-14	73.2
MS.gene36931.t1	AT4G10420	25.524	286	184	13	3	278	55	321	3.88e-14	71.6
MS.gene36931.t1	AT5G56420	27.397	292	172	13	4	279	155	422	2.73e-13	69.7
MS.gene36931.t1	AT5G56420	27.397	292	172	13	4	279	155	422	2.73e-13	69.7
MS.gene36931.t1	AT5G56420	27.397	292	172	13	4	279	155	422	2.73e-13	69.7
MS.gene36931.t1	AT3G52680	29.252	294	170	14	5	278	169	444	5.01e-13	68.9
MS.gene36931.t1	AT4G00160	28.620	297	173	14	3	278	163	441	1.60e-12	67.8
MS.gene36931.t1	AT3G49030	28.028	289	180	11	3	278	167	440	2.96e-12	66.6
MS.gene36931.t1	AT4G10400	25.614	285	179	13	3	278	148	408	3.61e-11	63.5
MS.gene36931.t1	AT4G10400	25.614	285	179	13	3	278	148	408	3.61e-11	63.5
MS.gene36931.t1	AT4G10400	25.614	285	179	13	3	278	148	408	3.61e-11	63.5

Find 56 sgRNAs with CRISPR-Local

Find 85 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GCAATTTGAAATCCATTCTT+TGG	0.213271	8.4:-76745668	MS.gene36931:CDS
AATCCATTCTTTGGGTTATC+TGG	0.229805	8.4:-76745659	MS.gene36931:CDS
ATTCAATTTGAAGGATTTCT+TGG	0.248444	8.4:-76744729	MS.gene36931:CDS
AAACATCACTGAATTTGTTT+TGG	0.271901	8.4:+76745446	None:intergenic
CTCCTCGGCGCTCTCTCTGC+TGG	0.295657	8.4:-76745337	MS.gene36931:CDS
GGCAAACTTTGTCTGAGCTT+TGG	0.296523	8.4:+76745566	None:intergenic
AGATGGGATATAAGACATTT+AGG	0.327868	8.4:+76744759	None:intergenic
AAATCCTTCAAATTGAATTA+AGG	0.336116	8.4:+76744734	None:intergenic
CTGCTGGGACAAAACTTCTA+TGG	0.357303	8.4:-76745321	MS.gene36931:CDS
AAGCAAGCAGAGCAGAGAAT+TGG	0.362262	8.4:+76745061	None:intergenic
GATCTCCTTCCCTCGTCGTT+TGG	0.365317	8.4:-76745382	MS.gene36931:CDS
CAATTTGAAATCCATTCTTT+GGG	0.370180	8.4:-76745667	MS.gene36931:CDS
ATCGTTATTAAACATGAAGT+TGG	0.391412	8.4:-76745517	MS.gene36931:CDS
CTGACCTTAATTCAATTTGA+AGG	0.392055	8.4:-76744738	MS.gene36931:CDS
GAATATTGTACTTCACCATT+AGG	0.396744	8.4:+76744619	None:intergenic
CGCCGAGGAGTTTGACTAAT+GGG	0.400065	8.4:+76745350	None:intergenic
TGTGGAGCCCATCCTAAAAT+TGG	0.402676	8.4:+76744792	None:intergenic
TGATATTTCTGTGGACCTAA+TGG	0.409765	8.4:-76744634	MS.gene36931:CDS
TCCTCGGCGCTCTCTCTGCT+GGG	0.433017	8.4:-76745336	MS.gene36931:CDS
GTTTAGAGCTCATTCTTCCA+TGG	0.469801	8.4:-76745091	MS.gene36931:CDS
CAAATTGAATTAAGGTCAGA+TGG	0.471591	8.4:+76744742	None:intergenic
GCGCCGAGGAGTTTGACTAA+TGG	0.477807	8.4:+76745349	None:intergenic
GCCTCCCACCTACCTTGAAA+AGG	0.482061	8.4:-76745546	MS.gene36931:CDS
TTCAAGTTGGCACATTATTG+AGG	0.489594	8.4:+76744569	None:intergenic
CTTCCAGATAACCCAAAGAA+TGG	0.490296	8.4:+76745656	None:intergenic
TCGTTATTAAACATGAAGTT+GGG	0.495214	8.4:-76745516	MS.gene36931:CDS
TCAACAAATGACACCTCATC+TGG	0.509197	8.4:+76744702	None:intergenic
TTTAGAGCTCATTCTTCCAT+GGG	0.511191	8.4:-76745090	MS.gene36931:CDS
GGGACAAAACTTCTATGGTT+GGG	0.523080	8.4:-76745316	MS.gene36931:CDS
ATTAAGAGAACTTGAAGCAT+AGG	0.527792	8.4:+76745029	None:intergenic
CGGAACCAAACGACGAGGGA+AGG	0.540506	8.4:+76745377	None:intergenic
TGGGACAAAACTTCTATGGT+TGG	0.544136	8.4:-76745317	MS.gene36931:CDS
CAACTCAGTCAAATTCAAGT+TGG	0.550200	8.4:+76744556	None:intergenic
ATGCTAAGGAACTTAAGATC+GGG	0.560763	8.4:+76745472	None:intergenic
AATGCTAAGGAACTTAAGAT+CGG	0.564956	8.4:+76745471	None:intergenic
ATAAGACATTTAGGAACACT+TGG	0.572853	8.4:+76744768	None:intergenic
CATTTAGGAACACTTGGCTG+TGG	0.572984	8.4:+76744774	None:intergenic
GATTATTGCTGATATTTCTG+TGG	0.583156	8.4:-76744643	MS.gene36931:CDS
AAGATTATCGAAAGTGCGAA+GGG	0.595018	8.4:-76744592	MS.gene36931:CDS
GTCCCATTAGTCAAACTCCT+CGG	0.598203	8.4:-76745352	MS.gene36931:CDS
AATTGCAGCAGCTTCAGTGA+TGG	0.598966	8.4:+76745685	None:intergenic
TCTTCTGTGAATGCAATCCT+CGG	0.604515	8.4:-76745631	MS.gene36931:CDS
GTCGACAAACAGTGGCTGCT+AGG	0.605424	8.4:-76745158	MS.gene36931:intron
GAAGATTATCGAAAGTGCGA+AGG	0.605762	8.4:-76744593	MS.gene36931:CDS
ATTTCTTGGATTACCAGATG+AGG	0.609098	8.4:-76744715	MS.gene36931:CDS
AAATTGAATTAAGGTCAGAT+GGG	0.614914	8.4:+76744743	None:intergenic
TCTCTTAATTCAAAACAACA+AGG	0.655812	8.4:-76745015	MS.gene36931:intron
AGAGAATTGGAGTTAACCCA+TGG	0.665165	8.4:+76745074	None:intergenic
ACGACGGAACCAAACGACGA+GGG	0.667009	8.4:+76745373	None:intergenic
GCACAACTTGCACAACGTGG+TGG	0.668875	8.4:-76745416	MS.gene36931:CDS
TCCCAGCAGAGAGAGCGCCG+AGG	0.686302	8.4:+76745335	None:intergenic
GTTGGGTGCTTCAACAACCA+AGG	0.688558	8.4:-76745299	MS.gene36931:intron
GACGACGGAACCAAACGACG+AGG	0.696892	8.4:+76745372	None:intergenic
GAGTTTGACTAATGGGACGA+CGG	0.698443	8.4:+76745357	None:intergenic
CATGCACAACTTGCACAACG+TGG	0.698471	8.4:-76745419	MS.gene36931:CDS
TCTGTGAATGCAATCCTCGG+CGG	0.745793	8.4:-76745628	MS.gene36931:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AATAGTGAAATTTTTGTAAA+AGG	+	chr8.4:76745143-76745162	None:intergenic	15.0%
!!	AAATCCTTCAAATTGAATTA+AGG	+	chr8.4:76745529-76745548	None:intergenic	20.0%
!!	GTAATCTATTTCATAAAAAC+TGG	+	chr8.4:76745332-76745351	None:intergenic	20.0%
!!	TCATGATTTACTTATGTATA+TGG	-	chr8.4:76745042-76745061	MS.gene36931:CDS	20.0%
!!!	AGATCCAAAATTTCAATTTT+TGG	+	chr8.4:76744662-76744681	None:intergenic	20.0%
!!!	GATCCAAAATTTCAATTTTT+GGG	+	chr8.4:76744661-76744680	None:intergenic	20.0%
!	AAATTGAATTAAGGTCAGAT+GGG	+	chr8.4:76745520-76745539	None:intergenic	25.0%
!	ACTAAAATAAAACTTGACCT+TGG	+	chr8.4:76744981-76745000	None:intergenic	25.0%
!	ATCGTTATTAAACATGAAGT+TGG	-	chr8.4:76744743-76744762	MS.gene36931:CDS	25.0%
!	ATTCAATTTGAAGGATTTCT+TGG	-	chr8.4:76745531-76745550	MS.gene36931:CDS	25.0%
!	TAGTTTCATGTGTATTTATC+CGG	-	chr8.4:76745300-76745319	MS.gene36931:CDS	25.0%
!	TCGTTATTAAACATGAAGTT+GGG	-	chr8.4:76744744-76744763	MS.gene36931:CDS	25.0%
!	TCTCTTAATTCAAAACAACA+AGG	-	chr8.4:76745245-76745264	MS.gene36931:intron	25.0%
!!	AATTTTGGATCTTAACTTTC+AGG	-	chr8.4:76744670-76744689	MS.gene36931:CDS	25.0%
!!	ATTTTGGATCTTAACTTTCA+GGG	-	chr8.4:76744671-76744690	MS.gene36931:CDS	25.0%
!!	CAATTTGAAATCCATTCTTT+GGG	-	chr8.4:76744593-76744612	MS.gene36931:CDS	25.0%
!!!	AAACATCACTGAATTTGTTT+TGG	+	chr8.4:76744817-76744836	None:intergenic	25.0%
!!!	ATTTGTTTTGGATAATGCTA+AGG	+	chr8.4:76744805-76744824	None:intergenic	25.0%
	AATGCTAAGGAACTTAAGAT+CGG	+	chr8.4:76744792-76744811	None:intergenic	30.0%
	AGATGGGATATAAGACATTT+AGG	+	chr8.4:76745504-76745523	None:intergenic	30.0%
	ATAAGACATTTAGGAACACT+TGG	+	chr8.4:76745495-76745514	None:intergenic	30.0%
	ATTAAGAGAACTTGAAGCAT+AGG	+	chr8.4:76745234-76745253	None:intergenic	30.0%
	CAAATTGAATTAAGGTCAGA+TGG	+	chr8.4:76745521-76745540	None:intergenic	30.0%
	CTGACCTTAATTCAATTTGA+AGG	-	chr8.4:76745522-76745541	MS.gene36931:CDS	30.0%
	GAATATTGTACTTCACCATT+AGG	+	chr8.4:76745644-76745663	None:intergenic	30.0%
	TAACCATGTTACATATTCAG+TGG	+	chr8.4:76745389-76745408	None:intergenic	30.0%
	TCATAAAAACTGGTTAAGTC+CGG	+	chr8.4:76745322-76745341	None:intergenic	30.0%
!	CTGCCCAAAAATTGAAATTT+TGG	-	chr8.4:76744655-76744674	MS.gene36931:CDS	30.0%
!	GATTATTGCTGATATTTCTG+TGG	-	chr8.4:76745617-76745636	MS.gene36931:CDS	30.0%
!	GCAATTTGAAATCCATTCTT+TGG	-	chr8.4:76744592-76744611	MS.gene36931:CDS	30.0%
!	TTTTGTAAAAGGTGATCACA+GGG	+	chr8.4:76745132-76745151	None:intergenic	30.0%
!	TTTTTGTAAAAGGTGATCAC+AGG	+	chr8.4:76745133-76745152	None:intergenic	30.0%
	ACACCACTGAATATGTAACA+TGG	-	chr8.4:76745383-76745402	MS.gene36931:CDS	35.0%
	ATGCTAAGGAACTTAAGATC+GGG	+	chr8.4:76744791-76744810	None:intergenic	35.0%
	ATTTCTTGGATTACCAGATG+AGG	-	chr8.4:76745545-76745564	MS.gene36931:CDS	35.0%
	CACATGAAACTAATACAGAC+TGG	+	chr8.4:76745292-76745311	None:intergenic	35.0%
!	AACGATTTTCAGCCTTTTCA+AGG	+	chr8.4:76744729-76744748	None:intergenic	35.0%
!	AAGATTATCGAAAGTGCGAA+GGG	-	chr8.4:76745668-76745687	MS.gene36931:CDS	35.0%
!	AATCCATTCTTTGGGTTATC+TGG	-	chr8.4:76744601-76744620	MS.gene36931:CDS	35.0%
!	GTTGAGCATGTTTTGCAAAA+AGG	-	chr8.4:76745576-76745595	MS.gene36931:CDS	35.0%
!	TGATATTTCTGTGGACCTAA+TGG	-	chr8.4:76745626-76745645	MS.gene36931:CDS	35.0%
!	TTTAGAGCTCATTCTTCCAT+GGG	-	chr8.4:76745170-76745189	MS.gene36931:intron	35.0%
!!	AACAGTCACCAATTTTAGGA+TGG	-	chr8.4:76745460-76745479	MS.gene36931:CDS	35.0%
!!	ATTTTCAGCCTTTTCAAGGT+AGG	+	chr8.4:76744725-76744744	None:intergenic	35.0%
!!	TTCAAGTTGGCACATTATTG+AGG	+	chr8.4:76745694-76745713	None:intergenic	35.0%
!!!	ACAGTCACCAATTTTAGGAT+GGG	-	chr8.4:76745461-76745480	MS.gene36931:CDS	35.0%
	AGAGAATTGGAGTTAACCCA+TGG	+	chr8.4:76745189-76745208	None:intergenic	40.0%
	CTTCCAGATAACCCAAAGAA+TGG	+	chr8.4:76744607-76744626	None:intergenic	40.0%
	GGGACAAAACTTCTATGGTT+GGG	-	chr8.4:76744944-76744963	MS.gene36931:intron	40.0%
	TCAACAAATGACACCTCATC+TGG	+	chr8.4:76745561-76745580	None:intergenic	40.0%
	TCTTCTGTGAATGCAATCCT+CGG	-	chr8.4:76744629-76744648	MS.gene36931:CDS	40.0%
	TGATTAACGTCGACAAACAG+TGG	-	chr8.4:76745094-76745113	MS.gene36931:CDS	40.0%
	TGGGACAAAACTTCTATGGT+TGG	-	chr8.4:76744943-76744962	MS.gene36931:intron	40.0%
!	AAATTGGTGACTGTTCCTGT+AGG	+	chr8.4:76745455-76745474	None:intergenic	40.0%
!	CAGGAACAGTCACCAATTTT+AGG	-	chr8.4:76745456-76745475	MS.gene36931:CDS	40.0%
!	GAAGATTATCGAAAGTGCGA+AGG	-	chr8.4:76745667-76745686	MS.gene36931:CDS	40.0%
!	GTTTAGAGCTCATTCTTCCA+TGG	-	chr8.4:76745169-76745188	MS.gene36931:intron	40.0%
!	TCAAGTCTTTTGTTGCCTAC+AGG	-	chr8.4:76745437-76745456	MS.gene36931:CDS	40.0%
	AAGCAAGCAGAGCAGAGAAT+TGG	+	chr8.4:76745202-76745221	None:intergenic	45.0%
	AATTGCAGCAGCTTCAGTGA+TGG	+	chr8.4:76744578-76744597	None:intergenic	45.0%
	CATTTAGGAACACTTGGCTG+TGG	+	chr8.4:76745489-76745508	None:intergenic	45.0%
	CTGCTGGGACAAAACTTCTA+TGG	-	chr8.4:76744939-76744958	MS.gene36931:intron	45.0%
	GAGTTTGACTAATGGGACGA+CGG	+	chr8.4:76744906-76744925	None:intergenic	45.0%
	GGCAAACTTTGTCTGAGCTT+TGG	+	chr8.4:76744697-76744716	None:intergenic	45.0%
	GTCCCATTAGTCAAACTCCT+CGG	-	chr8.4:76744908-76744927	MS.gene36931:intron	45.0%
	TGTGGAGCCCATCCTAAAAT+TGG	+	chr8.4:76745471-76745490	None:intergenic	45.0%
!!	TCAGCCTTTTCAAGGTAGGT+GGG	+	chr8.4:76744721-76744740	None:intergenic	45.0%
!!	TTCAGCCTTTTCAAGGTAGG+TGG	+	chr8.4:76744722-76744741	None:intergenic	45.0%
	CATGCACAACTTGCACAACG+TGG	-	chr8.4:76744841-76744860	MS.gene36931:intron	50.0%
	CGCCGAGGAGTTTGACTAAT+GGG	+	chr8.4:76744913-76744932	None:intergenic	50.0%
	GTTGGGTGCTTCAACAACCA+AGG	-	chr8.4:76744961-76744980	MS.gene36931:intron	50.0%
	TCTGTGAATGCAATCCTCGG+CGG	-	chr8.4:76744632-76744651	MS.gene36931:CDS	50.0%
	ACGACGGAACCAAACGACGA+GGG	+	chr8.4:76744890-76744909	None:intergenic	55.0%
	GATCTCCTTCCCTCGTCGTT+TGG	-	chr8.4:76744878-76744897	MS.gene36931:intron	55.0%
	GCACAACTTGCACAACGTGG+TGG	-	chr8.4:76744844-76744863	MS.gene36931:intron	55.0%
	GCCTCCCACCTACCTTGAAA+AGG	-	chr8.4:76744714-76744733	MS.gene36931:CDS	55.0%
	GCGCCGAGGAGTTTGACTAA+TGG	+	chr8.4:76744914-76744933	None:intergenic	55.0%
	GTCGACAAACAGTGGCTGCT+AGG	-	chr8.4:76745102-76745121	MS.gene36931:CDS	55.0%
!!	GCCTTTTCAAGGTAGGTGGG+AGG	+	chr8.4:76744718-76744737	None:intergenic	55.0%
	CGGAACCAAACGACGAGGGA+AGG	+	chr8.4:76744886-76744905	None:intergenic	60.0%
	GACGACGGAACCAAACGACG+AGG	+	chr8.4:76744891-76744910	None:intergenic	60.0%
!!	CAATTTTTGGGCAGCCGCCG+AGG	+	chr8.4:76744649-76744668	None:intergenic	60.0%
	TCCTCGGCGCTCTCTCTGCT+GGG	-	chr8.4:76744924-76744943	MS.gene36931:intron	65.0%
	CTCCTCGGCGCTCTCTCTGC+TGG	-	chr8.4:76744923-76744942	MS.gene36931:intron	70.0%
!!	TCCCAGCAGAGAGAGCGCCG+AGG	+	chr8.4:76744928-76744947	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.4	gene	76744560	76745722	76744560	ID=MS.gene36931
chr8.4	mRNA	76744560	76745722	76744560	ID=MS.gene36931.t1;Parent=MS.gene36931
chr8.4	exon	76745300	76745722	76745300	ID=MS.gene36931.t1.exon1;Parent=MS.gene36931.t1
chr8.4	CDS	76745300	76745722	76745300	ID=cds.MS.gene36931.t1;Parent=MS.gene36931.t1
chr8.4	exon	76745016	76745168	76745016	ID=MS.gene36931.t1.exon2;Parent=MS.gene36931.t1
chr8.4	CDS	76745016	76745168	76745016	ID=cds.MS.gene36931.t1;Parent=MS.gene36931.t1
chr8.4	exon	76744560	76744823	76744560	ID=MS.gene36931.t1.exon3;Parent=MS.gene36931.t1
chr8.4	CDS	76744560	76744823	76744560	ID=cds.MS.gene36931.t1;Parent=MS.gene36931.t1

Gene Sequence

>MS.gene36931

ATGACAATCAGTTTACCATCACTGAAGCTGCTGCAATTTGAAATCCATTCTTTGGGTTATCTGGAAGAGTCTTCTGTGAATGCAATCCTCGGCGGCTGCCCAAAAATTGAAATTTTGGATCTTAACTTTCAGGGCCAAAGCTCAGACAAAGTTTGCCTCCCACCTACCTTGAAAAGGCTGAAAATCGTTATTAAACATGAAGTTGGGAGTGTGCTTGAAATAAATGCGCCCGATCTTAAGTTCCTTAGCATTATCCAAAACAAATTCAGTGATGTTTTAAACATGCACAACTTGCACAACGTGGTGGAAGCACATCTTGATCTCCTTCCCTCGTCGTTTGGTTCCGTCGTCCCATTAGTCAAACTCCTCGGCGCTCTCTCTGCTGGGACAAAACTTCTATGGTTGGGTGCTTCAACAACCAAGGTCAAGTTTTATTTTAGTTATTTAATGTTTACTTCATCATTTATATAGAGTACTAATTATCATGATTTACTTATGTATATGGATAGATATGCTTTTGTACTAATTACTACTTGATTAACGTCGACAAACAGTGGCTGCTAGGTCAACCCTGTGATCACCTTTTACAAAAATTTCACTATTTGCATCGTTTAGAGCTCATTCTTCCATGGGTTAACTCCAATTCTCTGCTCTGCTTGCTTCAAAAATGTCCTATGCTTCAAGTTCTCTTAATTCAAAACAACAAGGTTTGTTTAATCGAAGCTTAATCCAGTCTGTATTAGTTTCATGTGTATTTATCCGGACTTAACCAGTTTTTATGAAATAGATTACACAAATTAGAACTTGCATCTTACTGCATAGTACACCACTGAATATGTAACATGGTTAGTTCATTACTATGAATATTGCATCTCATTCAAGTCTTTTGTTGCCTACAGGAACAGTCACCAATTTTAGGATGGGCTCCACAGCCAAGTGTTCCTAAATGTCTTATATCCCATCTGACCTTAATTCAATTTGAAGGATTTCTTGGATTACCAGATGAGGTGTCATTTGTTGAGCATGTTTTGCAAAAAGGACTTGTTTTAAAGACAGTGATTATTGCTGATATTTCTGTGGACCTAATGGTGAAGTACAATATTCTCAGAAGATTATCGAAAGTGCGAAGGGCCTCAATAATGTGCCAACTTGAATTTGACTGA

Protein sequence

>MS.gene36931.t1

MTISLPSLKLLQFEIHSLGYLEESSVNAILGGCPKIEILDLNFQGQSSDKVCLPPTLKRLKIVIKHEVGSVLEINAPDLKFLSIIQNKFSDVLNMHNLHNVVEAHLDLLPSSFGSVVPLVKLLGALSAGTKLLWLGASTTKWLLGQPCDHLLQKFHYLHRLELILPWVNSNSLLCLLQKCPMLQVLLIQNNKEQSPILGWAPQPSVPKCLISHLTLIQFEGFLGLPDEVSFVEHVLQKGLVLKTVIIADISVDLMVKYNILRRLSKVRRASIMCQLEFD