AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene38943


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene38943.t1 MTR_8g445780 91.811 403 20 1 1 403 1 390 0.0 751
MS.gene38943.t1 MTR_8g014260 61.488 457 162 7 1 449 1 451 4.21e-178 506
MS.gene38943.t1 MTR_4g024710 64.138 290 102 2 162 449 58 347 5.29e-119 351
MS.gene38943.t1 MTR_2g083840 48.584 459 212 13 4 449 10 457 7.16e-119 355
MS.gene38943.t1 MTR_8g468810 47.257 474 214 15 1 449 1 463 4.25e-118 353
MS.gene38943.t1 MTR_8g077460 48.444 450 156 9 1 449 1 375 1.01e-117 349
MS.gene38943.t1 MTR_8g058970 48.560 486 204 16 1 449 1 477 1.74e-117 352
MS.gene38943.t1 MTR_8g062270 47.216 449 213 11 13 448 16 453 8.95e-113 339
MS.gene38943.t1 MTR_8g014210 69.697 231 70 0 219 449 1 231 6.91e-110 324
MS.gene38943.t1 MTR_5g092960 45.629 469 222 14 1 448 5 461 9.44e-107 324
MS.gene38943.t1 MTR_4g024745 64.234 274 96 2 160 431 10 283 9.56e-106 315
MS.gene38943.t1 MTR_8g468840 44.978 458 229 14 1 446 1 447 8.89e-103 313
MS.gene38943.t1 MTR_8g467800 44.872 468 215 14 2 449 9 453 2.60e-100 307
MS.gene38943.t1 MTR_4g032730 42.116 482 229 16 1 448 1 466 5.98e-98 301
MS.gene38943.t1 MTR_8g468760 44.371 453 192 13 13 448 9 418 3.14e-96 296
MS.gene38943.t1 MTR_8g014160 42.697 445 189 9 12 449 40 425 1.30e-93 289
MS.gene38943.t1 MTR_8g468810 47.244 381 172 12 1 362 1 371 4.37e-92 283
MS.gene38943.t1 MTR_8g058965 43.100 471 231 17 1 449 1 456 1.91e-91 285
MS.gene38943.t1 MTR_8g469020 41.612 459 232 14 13 449 7 451 1.92e-85 269
MS.gene38943.t1 MTR_5g092960 45.889 377 179 11 1 362 5 371 1.22e-81 258
MS.gene38943.t1 MTR_8g062310 40.807 446 213 17 13 449 25 428 3.54e-81 257
MS.gene38943.t1 MTR_8g468810 48.113 318 143 8 1 305 1 309 1.28e-80 252
MS.gene38943.t1 MTR_8g468810 48.113 318 143 8 1 305 1 309 1.47e-80 252
MS.gene38943.t1 MTR_8g468810 48.113 318 143 8 1 305 1 309 2.47e-80 253
MS.gene38943.t1 MTR_8g070950 40.215 465 231 22 1 449 1 434 1.41e-78 251
MS.gene38943.t1 MTR_4g050250 42.584 418 206 12 3 395 11 419 1.38e-77 248
MS.gene38943.t1 MTR_8g062010 39.514 453 239 17 7 449 3 430 6.19e-77 246
MS.gene38943.t1 MTR_8g062080 38.242 455 239 17 9 449 19 445 1.55e-74 241
MS.gene38943.t1 MTR_8g062300 36.864 491 241 19 2 449 13 477 1.15e-65 218
MS.gene38943.t1 MTR_5g021550 64.286 168 47 6 1 161 1 162 1.38e-62 200
MS.gene38943.t1 MTR_8g467800 45.741 317 149 9 2 311 9 309 4.52e-62 205
MS.gene38943.t1 MTR_8g014290 66.265 166 46 5 1 162 1 160 5.34e-60 193
MS.gene38943.t1 MTR_8g467790 36.735 392 186 17 13 391 148 490 7.57e-56 193
MS.gene38943.t1 MTR_4g024720 46.667 180 72 5 1 161 2 176 2.14e-39 141
MS.gene38943.t1 MTR_5g084070 30.512 449 269 15 5 441 2 419 7.84e-35 134
MS.gene38943.t1 MTR_1g041245 28.855 454 244 14 5 449 3 386 1.13e-32 127
MS.gene38943.t1 MTR_3g107100 30.087 462 228 21 11 449 9 398 9.33e-31 123
MS.gene38943.t1 MTR_1g038710 29.371 429 259 13 13 417 19 427 3.38e-30 122
MS.gene38943.t1 MTR_5g008950 26.185 443 241 14 15 449 1 365 8.92e-28 114
MS.gene38943.t1 MTR_1089s0010 27.373 453 248 17 3 449 2 379 1.29e-27 113
MS.gene38943.t1 MTR_8g014230 60.241 83 33 0 357 439 13 95 1.52e-27 105
MS.gene38943.t1 MTR_7g056433 27.354 446 249 14 12 449 11 389 3.12e-27 112
MS.gene38943.t1 MTR_4g056040 28.821 458 262 16 11 422 7 446 3.56e-27 114
MS.gene38943.t1 MTR_5g080710 30.243 453 270 17 5 441 24 446 4.06e-27 113
MS.gene38943.t1 MTR_2g005990 26.535 456 246 15 13 447 6 393 2.18e-26 110
MS.gene38943.t1 MTR_7g098510 28.009 457 238 16 7 449 12 391 3.09e-26 110
MS.gene38943.t1 MTR_2g086020 47.887 142 70 4 311 449 175 315 4.66e-26 108
MS.gene38943.t1 MTR_2g086020 30.594 219 108 10 41 252 4 185 3.18e-12 67.8
MS.gene38943.t1 MTR_3g108150 27.706 462 244 18 1 448 1 386 4.71e-26 109
MS.gene38943.t1 MTR_3g087260 27.893 484 264 16 12 448 11 456 8.97e-26 109
MS.gene38943.t1 MTR_4g056070 29.372 446 243 17 13 403 9 437 2.22e-25 108
MS.gene38943.t1 MTR_7g033915 28.194 454 224 18 5 448 3 364 8.34e-25 105
MS.gene38943.t1 MTR_3g107120 26.915 457 250 16 8 449 4 391 8.66e-25 105
MS.gene38943.t1 MTR_4g056030 28.176 433 253 15 13 417 9 411 2.31e-24 105
MS.gene38943.t1 MTR_3g108560 27.617 449 236 17 11 448 18 388 6.64e-24 103
MS.gene38943.t1 MTR_7g098480 27.069 447 251 14 7 448 12 388 7.37e-24 103
MS.gene38943.t1 MTR_1g085120 27.556 450 245 17 12 449 91 471 8.39e-24 103
MS.gene38943.t1 MTR_1g085120 27.111 450 247 16 12 449 166 546 1.41e-23 103
MS.gene38943.t1 MTR_4g056020 28.095 420 248 14 13 406 9 400 3.31e-23 102
MS.gene38943.t1 MTR_7g026500 24.783 460 268 12 1 448 1 394 4.02e-23 101
MS.gene38943.t1 MTR_4g113810 39.053 169 95 6 99 263 1 165 1.31e-22 94.7
MS.gene38943.t1 MTR_7g098570 27.253 455 238 17 6 445 13 389 1.59e-22 100
MS.gene38943.t1 MTR_6g022500 27.394 449 241 18 13 449 101 476 1.99e-22 99.8
MS.gene38943.t1 MTR_3g023630 27.778 450 234 22 10 449 5 373 2.12e-22 98.6
MS.gene38943.t1 MTR_1g066830 25.893 448 251 15 13 448 8 386 2.50e-22 98.6
MS.gene38943.t1 MTR_8g014220 34.783 207 75 7 3 205 9 159 2.64e-22 93.6
MS.gene38943.t1 MTR_7g115270 25.821 457 261 17 6 446 5 399 2.89e-22 98.6
MS.gene38943.t1 MTR_6g040270 26.067 445 242 17 15 447 10 379 3.88e-22 98.2
MS.gene38943.t1 MTR_0543s0010 27.692 455 221 20 12 448 85 449 4.66e-22 98.6
MS.gene38943.t1 MTR_3g107160 26.154 455 247 16 9 449 4 383 7.97e-22 97.1
MS.gene38943.t1 MTR_4g055990 26.452 465 262 15 13 417 9 453 8.15e-22 98.2
MS.gene38943.t1 MTR_7g033990 28.381 451 231 19 5 441 3 375 1.19e-21 97.1
MS.gene38943.t1 MTR_7g088260 25.862 464 247 19 2 449 80 462 1.21e-21 97.4
MS.gene38943.t1 MTR_4g055990 26.452 465 262 15 13 417 9 453 1.22e-21 97.8
MS.gene38943.t1 MTR_4g080787 27.637 474 288 20 7 448 13 463 1.53e-21 97.4
MS.gene38943.t1 MTR_2g036470 25.442 452 267 16 3 446 4 393 8.82e-21 94.4
MS.gene38943.t1 MTR_4g098590 27.397 438 229 16 15 431 1 370 3.00e-20 92.4
MS.gene38943.t1 MTR_3g105060 26.244 442 239 18 13 449 14 373 3.20e-20 92.4
MS.gene38943.t1 MTR_1g108820 27.578 446 243 20 13 447 8 384 4.23e-20 92.0
MS.gene38943.t1 MTR_2g007450 27.826 460 255 18 13 449 16 421 4.76e-20 92.4
MS.gene38943.t1 MTR_7g114710 26.882 465 223 18 1 449 1 364 7.69e-20 90.9
MS.gene38943.t1 MTR_4g080773 27.862 463 284 17 7 437 13 457 1.88e-19 90.9
MS.gene38943.t1 MTR_4g080773 27.862 463 284 17 7 437 13 457 2.20e-19 90.9
MS.gene38943.t1 MTR_5g073420 26.292 445 243 16 13 448 11 379 2.38e-19 89.7
MS.gene38943.t1 MTR_5g039950 27.373 453 251 16 6 437 15 410 2.51e-19 90.1
MS.gene38943.t1 MTR_8g014180 66.667 57 15 1 1 53 1 57 1.12e-18 80.1
MS.gene38943.t1 MTR_4g039440 25.442 452 249 18 13 449 34 412 1.37e-18 87.8
MS.gene38943.t1 MTR_4g024770 61.538 65 21 2 1 61 8 72 2.92e-18 79.3
MS.gene38943.t1 MTR_4g081030 32.407 324 165 18 10 313 13 302 4.59e-18 85.9
MS.gene38943.t1 MTR_5g008920 24.622 463 247 20 6 449 2 381 5.39e-18 85.9
MS.gene38943.t1 MTR_4g055580 26.856 458 263 16 13 417 100 538 6.26e-18 86.7
MS.gene38943.t1 MTR_0492s0020 26.950 423 202 19 12 417 85 417 1.11e-17 85.5
MS.gene38943.t1 MTR_3g082890 26.923 468 259 17 1 449 81 484 1.54e-17 85.1
MS.gene38943.t1 MTR_3g109982 27.347 490 265 18 12 442 12 469 1.56e-17 85.9
MS.gene38943.t1 MTR_6g011460 25.721 451 246 17 13 449 46 421 3.09e-17 84.0
MS.gene38943.t1 MTR_7g056447 32.367 207 113 9 7 209 3 186 4.96e-17 81.6
MS.gene38943.t1 MTR_3g071850 24.943 441 256 13 13 441 24 401 5.83e-17 84.0
MS.gene38943.t1 MTR_1g053025 26.566 463 233 21 13 446 2 386 9.50e-17 82.0
MS.gene38943.t1 MTR_1g115245 31.720 186 107 6 3 185 16 184 1.01e-16 80.9
MS.gene38943.t1 MTR_2g100570 30.769 247 159 7 13 257 72 308 2.35e-16 81.6
MS.gene38943.t1 MTR_2g100570 30.769 247 159 7 13 257 72 308 3.13e-16 81.3
MS.gene38943.t1 MTR_5g061680 27.200 375 178 13 13 384 11 293 3.88e-16 79.7
MS.gene38943.t1 MTR_1g115250 25.708 459 276 18 4 437 21 439 4.40e-16 80.5
MS.gene38943.t1 MTR_4g045900 24.895 474 264 20 13 415 26 478 4.72e-16 80.9
MS.gene38943.t1 MTR_2g100570 30.769 247 159 7 13 257 72 308 4.75e-16 80.9
MS.gene38943.t1 MTR_3g082890 26.392 485 277 17 1 449 1 441 5.30e-16 80.1
MS.gene38943.t1 MTR_1g090883 28.571 385 218 16 3 359 2 357 9.63e-16 79.0
MS.gene38943.t1 MTR_5g058100 30.717 293 172 10 13 292 9 283 9.87e-16 79.0
MS.gene38943.t1 MTR_5g058000 33.673 196 106 7 13 205 8 182 1.15e-15 78.6
MS.gene38943.t1 MTR_6g045333 23.128 454 274 12 7 448 55 445 1.46e-15 79.0
MS.gene38943.t1 MTR_2g007400 25.996 477 246 18 5 449 2 403 1.77e-15 78.6
MS.gene38943.t1 MTR_3g048290 22.981 483 300 16 6 448 14 464 1.79e-15 79.0
MS.gene38943.t1 MTR_2g100590 31.727 249 154 9 13 257 42 278 2.29e-15 78.2
MS.gene38943.t1 MTR_2g100590 31.727 249 154 9 13 257 42 278 2.71e-15 78.2
MS.gene38943.t1 MTR_2g100590 31.727 249 154 9 13 257 42 278 4.08e-15 77.8
MS.gene38943.t1 MTR_6g022360 25.161 465 219 17 13 448 43 407 4.68e-15 77.0
MS.gene38943.t1 MTR_7g007080 25.265 471 223 22 11 447 2 377 6.20e-15 76.6
MS.gene38943.t1 MTR_4g093690 30.769 299 162 13 1 279 1 274 7.14e-15 75.1
MS.gene38943.t1 MTR_7g032380 33.498 203 108 8 13 210 11 191 1.03e-14 75.5
MS.gene38943.t1 MTR_7g032380 33.636 110 70 1 343 449 247 356 1.05e-13 72.4
MS.gene38943.t1 MTR_1g085120 30.153 262 153 10 12 262 178 420 1.20e-14 76.3
MS.gene38943.t1 MTR_1g107385 26.316 456 255 18 10 447 29 421 1.32e-14 75.9
MS.gene38943.t1 MTR_3g448340 24.793 484 287 22 13 448 6 460 1.73e-14 75.5
MS.gene38943.t1 MTR_5g039490 31.188 202 122 4 13 210 20 208 2.08e-14 75.1
MS.gene38943.t1 MTR_2g082800 27.094 406 240 17 5 390 17 386 2.09e-14 75.1
MS.gene38943.t1 MTR_4g134150 28.634 227 125 8 2 222 3 198 3.74e-14 72.0
MS.gene38943.t1 MTR_3g040700 29.907 214 129 5 1 211 31 226 5.57e-14 73.9
MS.gene38943.t1 MTR_2g082880 30.455 220 112 7 11 212 8 204 1.29e-13 72.8
MS.gene38943.t1 MTR_5g073370 27.891 294 177 13 13 292 5 277 2.28e-13 71.6
MS.gene38943.t1 MTR_3g036250 31.683 202 117 5 13 211 5 188 2.39e-13 71.6
MS.gene38943.t1 MTR_1g067190 25.862 348 203 12 4 341 6 308 2.59e-13 71.2
MS.gene38943.t1 MTR_0049s0110 22.560 461 281 17 13 448 8 417 2.79e-13 71.6
MS.gene38943.t1 MTR_5g083890 28.667 300 175 12 12 284 5 292 7.04e-13 70.9
MS.gene38943.t1 MTR_2g082860 39.130 92 49 2 5 94 17 103 8.32e-13 65.5
MS.gene38943.t1 MTR_1g108820 31.343 201 111 8 13 210 8 184 1.03e-12 69.7
MS.gene38943.t1 MTR_8g085430 30.233 215 106 8 13 210 11 198 1.34e-12 68.9
MS.gene38943.t1 MTR_7g056287 30.198 202 120 7 12 210 2 185 1.45e-12 69.3
MS.gene38943.t1 MTR_3g110010 32.512 203 108 6 12 210 12 189 1.48e-12 70.1
MS.gene38943.t1 MTR_7g025650 26.062 353 216 12 12 348 18 341 1.97e-12 69.7
MS.gene38943.t1 MTR_2g082850 31.061 132 83 3 6 137 15 138 2.47e-12 68.6
MS.gene38943.t1 MTR_7g075820 27.517 298 180 10 12 284 5 291 2.67e-12 68.6
MS.gene38943.t1 MTR_7g056277 27.737 274 169 11 8 272 254 507 3.57e-12 68.9
MS.gene38943.t1 MTR_7g098590 43.750 80 32 1 7 86 12 78 3.73e-12 63.9
MS.gene38943.t1 MTR_1g014450 27.839 273 142 12 11 269 14 245 4.01e-12 68.2
MS.gene38943.t1 MTR_7g080440 26.238 404 204 16 3 359 2 358 4.67e-12 67.8
MS.gene38943.t1 MTR_7g032370 34.545 110 69 1 343 449 243 352 4.75e-12 67.4
MS.gene38943.t1 MTR_3g115430 35.780 109 65 3 343 449 20 125 5.80e-12 63.2
MS.gene38943.t1 MTR_5g012840 24.178 426 192 17 36 449 12 318 9.37e-12 66.2
MS.gene38943.t1 MTR_7g055943 31.841 201 115 6 13 210 40 221 9.89e-12 67.0
MS.gene38943.t1 MTR_8g015830 30.374 214 132 7 11 212 6 214 1.32e-11 67.0
MS.gene38943.t1 MTR_8g015830 30.374 214 132 7 11 212 6 214 1.35e-11 66.6
MS.gene38943.t1 MTR_2g094750 27.034 381 234 15 12 358 89 459 1.39e-11 66.6
MS.gene38943.t1 MTR_7g033945 32.124 193 106 7 4 193 2 172 1.56e-11 63.5
MS.gene38943.t1 MTR_8g017280 29.814 161 87 4 9 163 32 172 1.93e-11 65.1
MS.gene38943.t1 MTR_3g108560 26.331 357 177 15 11 359 18 296 2.24e-11 65.1
MS.gene38943.t1 MTR_1g059860 25.000 308 182 10 117 409 37 310 2.24e-11 65.1
MS.gene38943.t1 MTR_5g080150 24.337 415 236 16 10 393 2 369 2.41e-11 65.5
MS.gene38943.t1 MTR_7g056280 33.152 184 98 7 11 187 4 169 2.50e-11 66.2
MS.gene38943.t1 MTR_6g018600 27.500 320 197 13 11 318 50 346 2.96e-11 65.5
MS.gene38943.t1 MTR_8g017280 29.814 161 87 4 9 163 32 172 3.25e-11 65.5
MS.gene38943.t1 MTR_5g045170 29.524 210 112 8 15 214 16 199 3.48e-11 65.1
MS.gene38943.t1 MTR_7g034110 33.566 143 73 4 13 155 11 131 3.76e-11 64.7
MS.gene38943.t1 MTR_1g016340 24.888 446 267 17 1 417 1 407 4.34e-11 65.1
MS.gene38943.t1 MTR_2g070780 48.000 75 37 2 11 84 15 88 5.39e-11 64.3
MS.gene38943.t1 MTR_7g056430 30.288 208 94 7 7 211 3 162 5.66e-11 65.5
MS.gene38943.t1 MTR_8g015680 28.774 212 131 7 11 212 5 206 7.09e-11 64.7
MS.gene38943.t1 MTR_7g056420 30.288 208 94 7 7 211 3 162 7.72e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene38943.t1 AT4G26340 30.549 455 261 16 13 449 2 419 2.69e-43 157
MS.gene38943.t1 AT3G49030 29.087 471 264 19 5 448 13 440 6.29e-34 132
MS.gene38943.t1 AT1G16930 27.101 476 281 15 6 449 8 449 8.87e-34 132
MS.gene38943.t1 AT1G16930 27.101 476 281 15 6 449 8 449 8.87e-34 132
MS.gene38943.t1 AT1G16930 27.101 476 281 15 6 449 8 449 8.87e-34 132
MS.gene38943.t1 AT4G26350 27.922 462 273 16 13 449 2 428 3.32e-33 130
MS.gene38943.t1 AT4G00160 30.652 460 263 19 12 448 15 441 2.72e-32 128
MS.gene38943.t1 AT3G49030 28.664 464 249 18 5 448 13 414 5.51e-32 126
MS.gene38943.t1 AT4G10400 28.090 445 273 17 13 448 2 408 5.62e-32 126
MS.gene38943.t1 AT4G10400 28.090 445 273 17 13 448 2 408 5.62e-32 126
MS.gene38943.t1 AT4G10400 28.090 445 273 17 13 448 2 408 5.62e-32 126
MS.gene38943.t1 AT3G50710 29.386 456 273 16 13 449 2 427 9.19e-32 126
MS.gene38943.t1 AT2G04230 29.202 476 280 17 1 449 1 446 1.58e-31 125
MS.gene38943.t1 AT1G78760 24.894 470 296 17 2 447 5 441 3.67e-31 125
MS.gene38943.t1 AT4G13965 30.989 455 265 17 6 446 1 420 4.30e-31 124
MS.gene38943.t1 AT3G52680 30.568 458 264 18 12 448 20 444 6.05e-30 121
MS.gene38943.t1 AT1G78750 26.722 479 289 19 2 446 5 455 2.11e-29 120
MS.gene38943.t1 AT1G78750 26.722 479 289 19 2 446 5 455 2.11e-29 120
MS.gene38943.t1 AT1G32375 27.790 457 274 17 13 449 2 422 2.29e-29 119
MS.gene38943.t1 AT1G32375 27.790 457 274 17 13 449 2 422 2.29e-29 119
MS.gene38943.t1 AT1G06630 28.979 421 260 16 3 406 11 409 3.71e-29 118
MS.gene38943.t1 AT1G06630 28.979 421 260 16 3 406 2 400 4.07e-29 118
MS.gene38943.t1 AT1G06630 28.979 421 260 16 3 406 2 400 4.07e-29 118
MS.gene38943.t1 AT1G06630 28.979 421 260 16 3 406 2 400 4.07e-29 118
MS.gene38943.t1 AT1G06630 28.979 421 260 16 3 406 2 400 4.07e-29 118
MS.gene38943.t1 AT5G56420 28.540 452 275 18 12 449 5 422 5.90e-29 118
MS.gene38943.t1 AT5G56420 28.540 452 275 18 12 449 5 422 5.90e-29 118
MS.gene38943.t1 AT5G56420 28.540 452 275 18 12 449 5 422 5.90e-29 118
MS.gene38943.t1 AT1G06630 34.035 285 164 12 3 279 2 270 7.28e-29 115
MS.gene38943.t1 AT1G06630 30.518 367 229 14 3 359 2 352 1.26e-28 116
MS.gene38943.t1 AT1G06630 30.518 367 229 14 3 359 2 352 1.26e-28 116
MS.gene38943.t1 AT5G56370 27.193 456 275 14 13 448 2 420 2.26e-28 116
MS.gene38943.t1 AT5G56370 27.193 456 275 14 13 448 2 420 2.26e-28 116
MS.gene38943.t1 AT1G06630 30.435 368 230 14 3 360 2 353 6.11e-28 116
MS.gene38943.t1 AT1G69630 26.030 461 301 14 6 447 10 449 6.81e-28 115
MS.gene38943.t1 AT5G60610 29.009 424 245 19 13 418 2 387 2.11e-25 107
MS.gene38943.t1 AT5G60610 29.009 424 245 19 13 418 2 387 2.11e-25 107
MS.gene38943.t1 AT5G56440 27.897 466 268 20 13 448 2 429 4.24e-25 107
MS.gene38943.t1 AT5G56560 27.394 449 275 20 15 449 7 418 4.76e-25 107
MS.gene38943.t1 AT2G26860 29.630 432 242 18 13 418 2 397 5.55e-25 106
MS.gene38943.t1 AT2G26860 29.630 432 242 18 13 418 2 397 5.55e-25 106
MS.gene38943.t1 AT3G51530 28.814 472 273 18 4 449 19 453 6.85e-25 107
MS.gene38943.t1 AT5G38570 27.211 441 249 17 13 448 2 375 7.79e-25 105
MS.gene38943.t1 AT5G53840 25.813 461 280 19 10 446 15 437 1.05e-24 106
MS.gene38943.t1 AT1G51370 27.313 454 270 19 11 444 17 430 3.38e-24 104
MS.gene38943.t1 AT1G66290 24.740 481 277 20 3 446 18 450 5.54e-24 104
MS.gene38943.t1 AT1G80470 24.034 466 304 17 1 447 1 435 6.89e-24 104
MS.gene38943.t1 AT4G13985 26.293 464 303 17 5 446 10 456 7.22e-24 103
MS.gene38943.t1 AT4G27050 26.489 487 273 21 11 448 2 452 8.16e-24 103
MS.gene38943.t1 AT4G27050 26.489 487 273 21 11 448 2 452 8.16e-24 103
MS.gene38943.t1 AT4G27050 26.489 487 273 21 11 448 2 452 8.16e-24 103
MS.gene38943.t1 AT4G27050 26.489 487 273 21 11 448 2 452 8.16e-24 103
MS.gene38943.t1 AT4G27050 26.489 487 273 21 11 448 2 452 8.16e-24 103
MS.gene38943.t1 AT5G56820 27.632 456 261 20 13 446 15 423 1.17e-23 103
MS.gene38943.t1 AT2G26030 25.054 467 290 15 13 446 4 443 1.94e-23 102
MS.gene38943.t1 AT3G49020 26.981 467 272 19 11 449 20 445 3.25e-23 102
MS.gene38943.t1 AT5G53635 26.022 465 274 19 14 448 1 425 3.44e-23 101
MS.gene38943.t1 AT1G66310 26.004 473 277 18 4 446 10 439 4.30e-23 101
MS.gene38943.t1 AT5G22670 25.265 471 295 17 5 449 3 442 5.54e-23 101
MS.gene38943.t1 AT1G05080 28.274 481 269 18 1 448 1 438 6.11e-23 101
MS.gene38943.t1 AT3G49480 26.739 460 284 15 12 447 11 441 7.06e-23 100
MS.gene38943.t1 AT1G55030 26.432 454 275 16 13 448 19 431 7.72e-23 100
MS.gene38943.t1 AT5G56380 27.837 467 278 17 13 449 2 439 1.02e-22 100
MS.gene38943.t1 AT5G56380 27.837 467 278 17 13 449 2 439 1.02e-22 100
MS.gene38943.t1 AT1G55030 26.432 454 275 16 13 448 9 421 1.14e-22 100
MS.gene38943.t1 AT5G56400 27.766 461 271 21 13 449 33 455 1.33e-22 100
MS.gene38943.t1 AT2G26030 25.000 468 284 16 13 446 4 438 1.74e-22 99.8
MS.gene38943.t1 AT2G26030 25.000 468 284 16 13 446 4 438 1.74e-22 99.8
MS.gene38943.t1 AT5G41840 26.371 383 235 11 13 359 14 385 8.97e-22 98.2
MS.gene38943.t1 AT5G38590 26.340 429 252 20 13 420 2 387 1.33e-21 97.1
MS.gene38943.t1 AT4G09920 28.374 289 169 11 13 288 2 265 1.87e-21 94.7
MS.gene38943.t1 AT4G09920 28.374 289 169 11 13 288 2 265 1.87e-21 94.7
MS.gene38943.t1 AT4G09920 28.374 289 169 11 13 288 2 265 1.87e-21 94.7
MS.gene38943.t1 AT5G22720 26.240 484 273 19 10 448 20 464 3.03e-21 96.3
MS.gene38943.t1 AT3G59200 28.102 274 171 11 13 277 7 263 3.25e-21 95.1
MS.gene38943.t1 AT3G59190 29.181 281 175 10 5 275 3 269 4.44e-21 95.1
MS.gene38943.t1 AT4G09920 28.374 289 169 11 13 288 2 265 6.16e-21 93.6
MS.gene38943.t1 AT4G09920 28.374 289 169 11 13 288 2 265 6.16e-21 93.6
MS.gene38943.t1 AT3G59190 29.181 281 175 10 5 275 3 269 7.81e-21 95.5
MS.gene38943.t1 AT3G60040 26.877 413 250 17 12 400 12 396 8.69e-21 95.5
MS.gene38943.t1 AT3G59200 28.102 274 171 11 13 277 7 263 1.11e-20 95.1
MS.gene38943.t1 AT5G27750 24.843 479 292 20 13 449 5 457 1.28e-20 94.4
MS.gene38943.t1 AT3G60040 26.942 412 249 17 12 399 231 614 1.30e-20 95.1
MS.gene38943.t1 AT3G58940 24.771 436 274 14 13 423 2 408 1.34e-20 95.1
MS.gene38943.t1 AT3G58940 24.771 436 274 14 13 423 2 408 1.34e-20 95.1
MS.gene38943.t1 AT3G60040 26.942 412 249 17 12 399 229 612 1.54e-20 95.1
MS.gene38943.t1 AT3G58880 28.065 367 229 13 13 360 3 353 1.67e-20 94.0
MS.gene38943.t1 AT3G60040 26.942 412 249 17 12 399 231 614 1.71e-20 95.1
MS.gene38943.t1 AT3G60040 26.942 412 249 17 12 399 232 615 1.77e-20 95.1
MS.gene38943.t1 AT5G62970 27.731 476 275 22 13 448 2 448 1.80e-20 94.0
MS.gene38943.t1 AT5G56370 28.818 347 205 11 13 354 2 311 2.53e-20 92.0
MS.gene38943.t1 AT1G66300 23.276 464 308 15 3 446 18 453 2.76e-20 93.6
MS.gene38943.t1 AT4G14096 28.520 277 174 10 9 279 4 262 2.87e-20 93.6
MS.gene38943.t1 AT4G14096 28.520 277 174 10 9 279 4 262 2.87e-20 93.6
MS.gene38943.t1 AT1G13780 23.718 468 298 17 13 446 10 452 2.92e-20 93.2
MS.gene38943.t1 AT3G26930 28.419 468 265 19 10 449 18 443 4.83e-20 92.8
MS.gene38943.t1 AT4G14103 29.137 278 173 10 9 279 4 264 6.26e-20 91.7
MS.gene38943.t1 AT4G14103 29.137 278 173 10 9 279 4 264 6.26e-20 91.7
MS.gene38943.t1 AT3G54910 28.371 356 216 15 113 449 38 373 7.53e-20 91.3
MS.gene38943.t1 AT3G54910 28.371 356 216 15 113 449 38 373 7.53e-20 91.3
MS.gene38943.t1 AT3G54910 28.371 356 216 15 113 449 38 373 7.53e-20 91.3
MS.gene38943.t1 AT2G42730 25.591 465 296 21 12 446 4 448 8.16e-20 92.0
MS.gene38943.t1 AT5G41630 31.884 207 125 5 10 210 9 205 8.76e-20 92.0
MS.gene38943.t1 AT4G14103 29.137 278 173 10 9 279 4 264 9.55e-20 91.7
MS.gene38943.t1 AT5G22610 25.934 455 279 20 12 446 17 433 9.58e-20 92.0
MS.gene38943.t1 AT4G10420 26.844 339 218 13 121 448 2 321 1.24e-19 89.7
MS.gene38943.t1 AT1G66320 24.008 479 289 19 3 447 18 455 1.39e-19 91.3
MS.gene38943.t1 AT5G56810 29.284 461 270 19 8 446 5 431 1.58e-19 90.9
MS.gene38943.t1 AT3G42770 28.989 445 264 20 18 441 4 417 1.78e-19 91.3
MS.gene38943.t1 AT5G41830 28.052 385 239 14 1 359 1 373 2.42e-19 90.9
MS.gene38943.t1 AT5G44980 26.059 472 275 21 11 448 2 433 2.60e-19 90.1
MS.gene38943.t1 AT5G44980 26.059 472 275 21 11 448 2 433 2.60e-19 90.1
MS.gene38943.t1 AT5G22730 24.580 476 281 14 12 447 27 464 3.26e-19 90.1
MS.gene38943.t1 AT5G22730 24.580 476 281 14 12 447 27 464 3.26e-19 90.1
MS.gene38943.t1 AT3G58860 26.756 299 200 9 13 307 7 290 3.95e-19 89.7
MS.gene38943.t1 AT5G35995 25.720 486 281 19 10 448 2 454 4.53e-19 89.7
MS.gene38943.t1 AT5G35995 25.720 486 281 19 10 448 2 454 4.53e-19 89.7
MS.gene38943.t1 AT5G44950 25.173 433 269 16 12 418 3 406 7.15e-19 89.0
MS.gene38943.t1 AT5G25860 24.948 477 296 18 3 448 2 447 8.06e-19 89.0
MS.gene38943.t1 AT1G51370 26.269 453 254 20 11 444 17 408 1.06e-18 88.2
MS.gene38943.t1 AT3G26922 31.250 304 177 11 11 308 12 289 2.30e-18 85.9
MS.gene38943.t1 AT3G26922 31.250 304 177 11 11 308 12 289 2.30e-18 85.9
MS.gene38943.t1 AT5G56390 27.061 473 258 17 13 448 2 424 2.41e-18 87.4
MS.gene38943.t1 AT3G26920 28.947 342 204 14 125 448 19 339 3.07e-18 85.9
MS.gene38943.t1 AT3G26920 28.947 342 204 14 125 448 19 339 3.07e-18 85.9
MS.gene38943.t1 AT3G52680 30.303 363 211 15 7 360 15 344 5.08e-18 85.9
MS.gene38943.t1 AT3G49040 31.660 259 145 8 11 260 15 250 5.80e-18 84.7
MS.gene38943.t1 AT5G50270 28.698 453 243 23 13 431 2 408 6.51e-18 85.9
MS.gene38943.t1 AT3G58900 28.472 288 185 10 13 292 2 276 9.21e-18 84.3
MS.gene38943.t1 AT5G22610 25.800 469 292 21 12 446 17 463 9.63e-18 85.9
MS.gene38943.t1 AT3G58900 28.472 288 185 10 13 292 2 276 1.10e-17 84.3
MS.gene38943.t1 AT3G58900 28.472 288 185 10 13 292 2 276 1.10e-17 84.3
MS.gene38943.t1 AT2G42720 29.966 297 180 11 13 304 2 275 1.21e-17 85.5
MS.gene38943.t1 AT1G22000 25.532 470 267 18 12 446 28 449 1.66e-17 85.1
MS.gene38943.t1 AT4G00320 26.302 384 247 13 1 359 1 373 2.91e-17 84.3
MS.gene38943.t1 AT4G15060 26.131 398 236 17 11 387 24 384 3.17e-17 84.0
MS.gene38943.t1 AT3G58900 28.472 288 185 10 13 292 2 276 3.99e-17 84.0
MS.gene38943.t1 AT1G55660 26.898 461 290 24 13 448 53 491 4.13e-17 84.0
MS.gene38943.t1 AT2G29930 24.694 490 278 19 10 448 9 458 1.12e-16 82.4
MS.gene38943.t1 AT2G29930 24.694 490 278 19 10 448 9 458 1.12e-16 82.4
MS.gene38943.t1 AT3G58930 23.371 445 288 14 13 417 2 433 1.17e-16 82.4
MS.gene38943.t1 AT3G58930 23.371 445 288 14 13 417 2 433 1.17e-16 82.4
MS.gene38943.t1 AT3G58930 23.371 445 288 14 13 417 2 433 1.17e-16 82.4
MS.gene38943.t1 AT5G56410 26.977 430 277 17 20 427 10 424 1.39e-16 82.4
MS.gene38943.t1 AT5G22660 24.008 479 282 17 7 446 8 443 1.47e-16 82.0
MS.gene38943.t1 AT4G15060 27.797 295 177 12 11 288 170 445 1.53e-16 82.4
MS.gene38943.t1 AT3G62430 25.602 457 291 16 13 446 2 432 2.39e-16 81.3
MS.gene38943.t1 AT5G18780 25.376 465 297 18 4 446 2 438 2.48e-16 81.3
MS.gene38943.t1 AT5G18780 25.376 465 297 18 4 446 2 438 2.48e-16 81.3
MS.gene38943.t1 AT5G18770 26.350 463 287 22 12 446 23 459 2.53e-16 81.6
MS.gene38943.t1 AT1G64540 25.899 278 166 7 12 279 4 251 2.88e-16 81.3
MS.gene38943.t1 AT1G64540 25.899 278 166 7 12 279 4 251 2.88e-16 81.3
MS.gene38943.t1 AT3G52690 30.208 288 168 13 178 448 26 297 5.46e-16 79.0
MS.gene38943.t1 AT1G51370 26.870 361 212 16 11 358 17 338 7.34e-16 79.0
MS.gene38943.t1 AT1G58310 29.897 291 164 12 13 279 8 282 8.95e-16 79.7
MS.gene38943.t1 AT5G27750 25.826 333 197 14 13 313 5 319 1.97e-15 78.2
MS.gene38943.t1 AT4G00315 26.190 462 292 24 13 448 2 440 3.31e-15 77.8
MS.gene38943.t1 AT3G59230 26.289 388 236 14 6 359 5 376 3.61e-15 77.8
MS.gene38943.t1 AT1G55660 31.855 248 149 12 13 255 53 285 4.65e-15 77.0
MS.gene38943.t1 AT5G02930 28.777 278 152 12 13 279 28 270 4.76e-15 77.4
MS.gene38943.t1 AT3G59240 24.580 476 283 22 12 443 7 450 8.73e-15 76.6
MS.gene38943.t1 AT1G21990 24.644 491 282 21 12 448 8 464 2.10e-14 75.5
MS.gene38943.t1 AT5G38390 29.310 290 165 12 13 292 2 261 4.69e-14 74.3
MS.gene38943.t1 AT1G48400 29.787 282 170 11 8 277 5 270 5.70e-14 74.3
MS.gene38943.t1 AT1G48400 29.787 282 170 11 8 277 5 270 6.62e-14 73.9
MS.gene38943.t1 AT2G29910 27.660 282 165 11 10 279 2 256 6.92e-14 73.2
MS.gene38943.t1 AT2G29910 27.660 282 165 11 10 279 2 256 6.92e-14 73.2
MS.gene38943.t1 AT1G13780 24.316 329 197 13 13 311 10 316 7.95e-14 72.8
MS.gene38943.t1 AT2G29910 27.660 282 165 11 10 279 2 256 9.81e-14 72.8
MS.gene38943.t1 AT2G29910 27.660 282 165 11 10 279 2 256 9.81e-14 72.8
MS.gene38943.t1 AT2G29910 27.660 282 165 11 10 279 2 256 9.81e-14 72.8
MS.gene38943.t1 AT2G29910 27.660 282 165 11 10 279 2 256 9.81e-14 72.8
MS.gene38943.t1 AT2G29910 27.660 282 165 11 10 279 26 280 1.01e-13 72.8
MS.gene38943.t1 AT5G38392 32.692 156 87 5 13 163 2 144 1.15e-13 70.5
MS.gene38943.t1 AT3G44060 30.252 238 144 8 18 250 4 224 1.16e-13 73.2
MS.gene38943.t1 AT5G22700 25.060 415 235 18 13 391 6 380 1.23e-13 73.2
MS.gene38943.t1 AT5G22700 25.060 415 235 18 13 391 6 380 1.23e-13 73.2
MS.gene38943.t1 AT5G22700 25.060 415 235 18 13 391 6 380 1.23e-13 73.2
MS.gene38943.t1 AT5G22700 25.060 415 235 18 13 391 6 380 1.23e-13 73.2
MS.gene38943.t1 AT5G22700 24.413 426 246 18 2 391 32 417 1.66e-13 72.8
MS.gene38943.t1 AT1G66300 22.272 449 285 17 3 446 18 407 2.08e-13 72.0
MS.gene38943.t1 AT5G56800 26.855 283 175 12 181 448 78 343 2.98e-13 71.2
MS.gene38943.t1 AT5G56690 29.213 267 164 14 15 274 4 252 5.06e-13 70.9
MS.gene38943.t1 AT5G56452 27.311 238 145 7 222 449 8 227 8.69e-13 68.2
MS.gene38943.t1 AT5G38396 27.076 277 178 11 13 279 2 264 1.09e-12 70.1
MS.gene38943.t1 AT5G56700 25.316 316 205 11 120 420 54 353 1.44e-12 69.3
MS.gene38943.t1 AT4G22280 25.450 444 277 15 13 441 2 406 2.05e-12 68.9
MS.gene38943.t1 AT3G58920 24.230 487 293 16 13 446 2 465 2.08e-12 69.3
MS.gene38943.t1 AT3G59000 31.111 180 109 6 13 188 2 170 2.23e-12 69.3
MS.gene38943.t1 AT4G13960 32.402 179 104 7 13 188 2 166 2.24e-12 69.3
MS.gene38943.t1 AT4G13960 32.402 179 104 7 13 188 2 166 2.24e-12 69.3
MS.gene38943.t1 AT3G58980 24.364 472 285 20 13 446 2 439 2.64e-12 69.3
MS.gene38943.t1 AT3G59170 27.243 301 179 13 12 280 6 298 3.33e-12 68.6
MS.gene38943.t1 AT3G26922 29.371 286 170 11 29 308 1 260 3.84e-12 67.0
MS.gene38943.t1 AT3G26922 29.371 286 170 11 29 308 1 260 3.84e-12 67.0
MS.gene38943.t1 AT1G13570 25.591 465 260 20 13 448 6 413 5.55e-12 67.8
MS.gene38943.t1 AT1G13570 25.591 465 260 20 13 448 6 413 5.55e-12 67.8
MS.gene38943.t1 AT5G56452 27.234 235 148 7 222 449 8 226 8.16e-12 65.1
MS.gene38943.t1 AT3G59210 25.377 398 238 18 12 392 6 361 8.37e-12 67.4
MS.gene38943.t1 AT3G59210 25.377 398 238 18 12 392 6 361 8.37e-12 67.4
MS.gene38943.t1 AT3G59210 25.377 398 238 18 12 392 6 361 8.37e-12 67.4
MS.gene38943.t1 AT3G59210 25.377 398 238 18 12 392 6 361 8.37e-12 67.4
MS.gene38943.t1 AT3G59210 25.377 398 238 18 12 392 6 361 8.37e-12 67.4
MS.gene38943.t1 AT5G56560 25.926 351 183 16 15 360 7 285 1.18e-11 67.4
MS.gene38943.t1 AT3G49480 25.868 317 202 11 148 447 1 301 1.38e-11 65.9
MS.gene38943.t1 AT1G47915 45.833 72 35 1 8 79 3 70 2.79e-11 59.7
MS.gene38943.t1 AT3G26920 25.904 332 188 12 125 448 19 300 3.03e-11 64.7
MS.gene38943.t1 AT5G18780 25.203 369 231 13 4 354 2 343 3.99e-11 65.1
MS.gene38943.t1 AT5G18780 25.203 369 231 13 4 354 2 343 3.99e-11 65.1
MS.gene38943.t1 AT5G22700 23.716 409 229 17 2 391 32 376 4.89e-11 65.1
MS.gene38943.t1 AT5G50270 30.634 284 154 14 13 280 2 258 5.60e-11 63.9
MS.gene38943.t1 AT4G03220 23.260 503 290 18 13 448 24 497 5.77e-11 64.7
MS.gene38943.t1 AT4G22280 27.348 362 216 14 13 359 2 331 7.44e-11 63.9
MS.gene38943.t1 AT3G53550 24.922 321 148 11 135 448 6 240 7.63e-11 62.8
MS.gene38943.t1 AT5G18770 26.757 370 218 17 12 356 23 364 7.75e-11 63.9
MS.gene38943.t1 AT3G44810 29.648 199 126 8 18 213 12 199 7.79e-11 64.3
MS.gene38943.t1 AT5G44490 23.739 476 307 17 1 446 1 450 8.75e-11 64.3
MS.gene38943.t1 AT5G44490 23.739 476 307 17 1 446 1 450 9.00e-11 64.3
MS.gene38943.t1 AT3G03040 29.944 177 111 5 13 187 2 167 9.82e-11 63.9
MS.gene38943.t1 AT5G22660 25.926 270 147 10 7 255 8 245 1.00e-10 63.2

Find 102 sgRNAs with CRISPR-Local

Find 189 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGATTCAGAGATTCTATATT+TGG 0.113219 8.4:+49539400 None:intergenic
GTGAATATTCTGTTGATAAT+TGG 0.122482 8.4:-49540344 MS.gene38943:CDS
CTGACCTTTATTCAATTTAA+AGG 0.151367 8.4:-49538424 MS.gene38943:CDS
AATCTCCTTGGTGCTCTCTC+TGG 0.271392 8.4:-49539139 MS.gene38943:CDS
TGTGGAGCCCATCCTAAAAT+TGG 0.279335 8.4:+49538478 None:intergenic
GCCGGTTGTAACCGCGGTTT+TGG 0.297335 8.4:+49540590 None:intergenic
AGGTGGGATGTGAGACAATT+AGG 0.313441 8.4:+49538445 None:intergenic
CTCGCCGATGGCGCCACCTT+TGG 0.320559 8.4:-49540560 MS.gene38943:CDS
TGAATATTCTGTTGATAATT+GGG 0.341812 8.4:-49540343 MS.gene38943:CDS
CTTGAGTACCTTAACATTAC+CGG 0.363461 8.4:-49539265 MS.gene38943:CDS
GATTATTGCTGTTAGATCCT+TGG 0.370857 8.4:-49538329 MS.gene38943:CDS
AAGCAAGCTGAGCAGAGAAT+TGG 0.376516 8.4:+49538822 None:intergenic
GCTAATCAACATTGGTCATA+TGG 0.376775 8.4:-49539458 MS.gene38943:CDS
AACTTGGCCGAATGTGATTC+CGG 0.377442 8.4:+49539246 None:intergenic
CGTTCGGACTGATGGGTGTA+AGG 0.382250 8.4:+49540486 None:intergenic
ACCAAAACCGCGGTTACAAC+CGG 0.385571 8.4:-49540591 MS.gene38943:CDS
ATCTCCTTGGTGCTCTCTCT+GGG 0.389552 8.4:-49539138 MS.gene38943:CDS
GATTCAGAGATTCTATATTT+GGG 0.390556 8.4:+49539401 None:intergenic
TCACCGTAGCAAATGTTGTT+GGG 0.402484 8.4:-49539315 MS.gene38943:CDS
TTCTAATGCCGCAAGGGTTA+CGG 0.403621 8.4:+49540415 None:intergenic
TAGTCCTTTAAATTGAATAA+AGG 0.407580 8.4:+49538420 None:intergenic
CGTTTGGATTCCTCCGCCAT+TGG 0.409050 8.4:+49540687 None:intergenic
GATTCGGTGCATTTATTTCA+AGG 0.410913 8.4:+49539287 None:intergenic
CAAACTTTGTCTAAGCTTTG+CGG 0.415211 8.4:+49539367 None:intergenic
AATATAGAATCTCTGAATCT+TGG 0.418620 8.4:-49539397 MS.gene38943:CDS
GCATCCCACCTTCCTTGAAA+AGG 0.433459 8.4:-49539345 MS.gene38943:CDS
GACGACGGAACCAAGCGATT+GGG 0.435806 8.4:+49539171 None:intergenic
AACATTACCGGAATCACATT+CGG 0.442917 8.4:-49539253 MS.gene38943:CDS
AATTGGGTTCGTGCTGCCAT+TGG 0.445162 8.4:-49540327 MS.gene38943:CDS
GAAAGATAAGTGGGAGTTGT+CGG 0.446274 8.4:+49540512 None:intergenic
ATTGGGTTCGTGCTGCCATT+GGG 0.449288 8.4:-49540326 MS.gene38943:CDS
TCGACAAATGACACCTCATC+TGG 0.450212 8.4:+49538388 None:intergenic
ATGTGATTCCGGTAATGTTA+AGG 0.454527 8.4:+49539257 None:intergenic
TGTAAGGGATGAAAGATAAG+TGG 0.458732 8.4:+49540502 None:intergenic
GATGTCTTTCCCCAATCGCT+TGG 0.466262 8.4:-49539181 MS.gene38943:CDS
AGTTATACATGCTGAAAACT+TGG 0.470732 8.4:+49539230 None:intergenic
CAAAGTCAGCGAAAAGAGTA+AGG 0.479644 8.4:+49540283 None:intergenic
CAACTCAATCAAATGTAAGT+TGG 0.482291 8.4:+49538242 None:intergenic
ATCACCGTAGCAAATGTTGT+TGG 0.483657 8.4:-49539316 MS.gene38943:CDS
CTTTAAATTGAATAAAGGTC+AGG 0.486856 8.4:+49538425 None:intergenic
GCTTCCAAAGGTGGCGCCAT+CGG 0.489300 8.4:+49540556 None:intergenic
GAGTAAGGTTAAGTTCTTCA+AGG 0.490650 8.4:+49540298 None:intergenic
CAATTAGGAACCCTTGTTTG+TGG 0.491747 8.4:+49538460 None:intergenic
CGACGACGGAACCAAGCGAT+TGG 0.497659 8.4:+49539170 None:intergenic
CAGCCAACCTCATTTCGCTC+AGG 0.510698 8.4:-49540221 MS.gene38943:intron
GCCACAGAGGAGTGCATTCA+CGG 0.511226 8.4:+49539426 None:intergenic
ATGTTAAGGTACTCAAGATT+CGG 0.512313 8.4:+49539271 None:intergenic
GTCGCTTTACACAATCTCCT+TGG 0.515289 8.4:-49539151 MS.gene38943:CDS
GAACAGAGTACTTCTTCTCT+AGG 0.527944 8.4:+49538305 None:intergenic
TTCTTCAAGGTGAGGCCCAA+TGG 0.528462 8.4:+49540311 None:intergenic
TTTAAAACGTTCGGACTGAT+GGG 0.532934 8.4:+49540479 None:intergenic
TGGCATGTTGTAGAGGCCCT+TGG 0.537333 8.4:+49538262 None:intergenic
CGGATAGATGCTTCCAAAGG+TGG 0.544593 8.4:+49540547 None:intergenic
TAGGATGGGCTCCACAAACA+AGG 0.545989 8.4:-49538471 MS.gene38943:CDS
TAAATTGAATAAAGGTCAGG+TGG 0.546131 8.4:+49538428 None:intergenic
TTGGTAGGAGTGATAGGATG+TGG 0.551418 8.4:+49540613 None:intergenic
TGTTAACATCCAACACTCTA+CGG 0.555072 8.4:-49539509 MS.gene38943:CDS
TTCGCAAAAGCCAATGGCGG+AGG 0.555111 8.4:-49540697 None:intergenic
AACTAATCACCGTAGAGTGT+TGG 0.555937 8.4:+49539500 None:intergenic
CACCGTAGCAAATGTTGTTG+GGG 0.556660 8.4:-49539314 MS.gene38943:CDS
ATGTGGTTCAGTAAACCGTC+TGG 0.558234 8.4:+49540630 None:intergenic
GTAAGGGATGAAAGATAAGT+GGG 0.560351 8.4:+49540503 None:intergenic
GTTCGGACTGATGGGTGTAA+GGG 0.564036 8.4:+49540487 None:intergenic
ATTAGCAGCATCTTTAGTGA+AGG 0.565409 8.4:+49539475 None:intergenic
ATATGTTATCTAATGTGCCA+AGG 0.568785 8.4:-49538279 MS.gene38943:CDS
ACGACGGAACCAAGCGATTG+GGG 0.580572 8.4:+49539172 None:intergenic
TGTAAGTTGGCATGTTGTAG+AGG 0.583588 8.4:+49538255 None:intergenic
GGCGCCATCGGCGAGATAGA+CGG 0.585549 8.4:+49540568 None:intergenic
GTCATCTTTCTAATGCCGCA+AGG 0.586441 8.4:+49540408 None:intergenic
GTACTTCTTCTCTAGGTCCA+AGG 0.587968 8.4:+49538312 None:intergenic
TTGTACAAACAGTGGCTGCT+TGG 0.590843 8.4:-49538919 MS.gene38943:intron
AATCATACCTGAGCGAAATG+AGG 0.595690 8.4:+49540214 None:intergenic
AGCCCCAACAACATTTGCTA+CGG 0.597523 8.4:+49539312 None:intergenic
ATACCTGAGCGAAATGAGGT+TGG 0.598167 8.4:+49540218 None:intergenic
GTTGAGTCATTCAACAACCC+AGG 0.598967 8.4:-49539101 MS.gene38943:intron
TATGTTATCTAATGTGCCAA+GGG 0.599541 8.4:-49538278 MS.gene38943:CDS
TATTTGTTCCTCAGTCTCTG+TGG 0.607808 8.4:-49539541 MS.gene38943:intron
TCATCTTTCTAATGCCGCAA+GGG 0.609149 8.4:+49540409 None:intergenic
AAGATGCTGCTAATCAACAT+TGG 0.610394 8.4:-49539466 MS.gene38943:CDS
AGGTTAAGTTCTTCAAGGTG+AGG 0.611312 8.4:+49540303 None:intergenic
GCCGTTAACGAAAAGAGCGA+AGG 0.615653 8.4:+49540455 None:intergenic
GAGATTGTGTAAAGCGACGA+CGG 0.615856 8.4:+49539156 None:intergenic
AGGATGGGCTCCACAAACAA+GGG 0.616880 8.4:-49538470 MS.gene38943:CDS
CTATATTTGGGCAGCCACAG+AGG 0.618885 8.4:+49539413 None:intergenic
TAGACGGCCGGTTGTAACCG+CGG 0.630777 8.4:+49540584 None:intergenic
AAATTGAATAAAGGTCAGGT+GGG 0.632387 8.4:+49538429 None:intergenic
CCGGCCGTCTATCTCGCCGA+TGG 0.636669 8.4:-49540572 MS.gene38943:CDS
CAGAGGAGTGCATTCACGGA+AGG 0.638082 8.4:+49539430 None:intergenic
GTATAACTTGCACAATGTGG+TGG 0.638724 8.4:-49539215 MS.gene38943:CDS
ATAATCAGTAACTTACCAGA+CGG 0.652008 8.4:-49540645 MS.gene38943:CDS
GTTCTTCTCCGTAACCCTTG+CGG 0.652055 8.4:-49540423 MS.gene38943:CDS
TCCGTGAATGCACTCCTCTG+TGG 0.657642 8.4:-49539427 MS.gene38943:CDS
CCATCGGCGAGATAGACGGC+CGG 0.658769 8.4:+49540572 None:intergenic
AAGGGTTACGGAGAAGAACG+AGG 0.672603 8.4:+49540427 None:intergenic
GAGCGGATAGATGCTTCCAA+AGG 0.683062 8.4:+49540544 None:intergenic
AAACTGATAATCATCACGAG+TGG 0.693041 8.4:+49540368 None:intergenic
CATGTATAACTTGCACAATG+TGG 0.701040 8.4:-49539218 MS.gene38943:CDS
ACTACGAGGATTTCCAGATG+AGG 0.709055 8.4:-49538401 MS.gene38943:CDS
GTTGTCGGAGAAGTTGAGAG+CGG 0.716529 8.4:+49540527 None:intergenic
TAGTCCCAGAGAGAGCACCA+AGG 0.735567 8.4:+49539134 None:intergenic
ACTCCTACCAACCAAAACCG+CGG 0.738737 8.4:-49540601 MS.gene38943:CDS
ATTCAATTTAAAGGACTACG+AGG 0.742314 8.4:-49538415 MS.gene38943:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAGTTAATAGTTTATTAAT+AGG + chr8.4:49539921-49539940 None:intergenic 10.0%
!! ATATTCTACCTATTATAAAA+AGG + chr8.4:49539207-49539226 None:intergenic 15.0%
!! GTAATCTATTTCATAAAAAT+TGG + chr8.4:49540231-49540250 None:intergenic 15.0%
!! TAATCATGTTATATATTAAG+TGG + chr8.4:49540373-49540392 None:intergenic 15.0%
!! TATTCTACCTATTATAAAAA+GGG + chr8.4:49539206-49539225 None:intergenic 15.0%
!! ATATGGTTAAATTCATTTGT+TGG - chr8.4:49538941-49538960 MS.gene38943:intron 20.0%
!! TAGTCCTTTAAATTGAATAA+AGG + chr8.4:49540513-49540532 None:intergenic 20.0%
!! TGGTTAAAGAAACTAAAAAA+AGG + chr8.4:49539151-49539170 None:intergenic 20.0%
!!! AATATAGTAGTTTTTGTTCT+TGG + chr8.4:49539330-49539349 None:intergenic 20.0%
!!! ACTACTATATTTGATTTTGT+TGG - chr8.4:49539339-49539358 MS.gene38943:CDS 20.0%
!!! TGAATATTCTGTTGATAATT+GGG - chr8.4:49538587-49538606 MS.gene38943:intron 20.0%
!!! TTTTTGTACTAATTAGTAGT+TGG - chr8.4:49539986-49540005 MS.gene38943:intron 20.0%
! AATATAGAATCTCTGAATCT+TGG - chr8.4:49539533-49539552 MS.gene38943:intron 25.0%
! AGATTCAGAGATTCTATATT+TGG + chr8.4:49539533-49539552 None:intergenic 25.0%
! CTGACCTTTATTCAATTTAA+AGG - chr8.4:49540506-49540525 MS.gene38943:CDS 25.0%
! CTTTAAATTGAATAAAGGTC+AGG + chr8.4:49540508-49540527 None:intergenic 25.0%
! GATTCAGAGATTCTATATTT+GGG + chr8.4:49539532-49539551 None:intergenic 25.0%
! GGAAAAAAAAATGAGAGTTT+AGG - chr8.4:49538821-49538840 MS.gene38943:CDS 25.0%
! TTCACATCAAAGTTATATAG+TGG + chr8.4:49540203-49540222 None:intergenic 25.0%
!! AACATGACCCTTTTTATAAT+AGG - chr8.4:49539196-49539215 MS.gene38943:CDS 25.0%
!! AATTGTAGTTCTTTTGATGT+TGG - chr8.4:49539229-49539248 MS.gene38943:CDS 25.0%
!! GTTTAGGTTTCTTATTAGTT+CGG - chr8.4:49538837-49538856 MS.gene38943:CDS 25.0%
!! TTAAATTCATTTGTTGGAAG+TGG - chr8.4:49538947-49538966 MS.gene38943:intron 25.0%
!!! AACAATTACCAATTTTAGGA+TGG - chr8.4:49540444-49540463 MS.gene38943:CDS 25.0%
!!! ACAATTACCAATTTTAGGAT+GGG - chr8.4:49540445-49540464 MS.gene38943:CDS 25.0%
!!! GTGAATATTCTGTTGATAAT+TGG - chr8.4:49538586-49538605 MS.gene38943:intron 25.0%
!!! TTATCGATTCAACACATAAA+GGG + chr8.4:49539028-49539047 None:intergenic 25.0%
!!! TTTTTAGTTTCTTTAACCAG+TGG - chr8.4:49539152-49539171 MS.gene38943:CDS 25.0%
AAATTGAATAAAGGTCAGGT+GGG + chr8.4:49540504-49540523 None:intergenic 30.0%
ACTTAAGAAAAGACTTAACC+TGG + chr8.4:49539850-49539869 None:intergenic 30.0%
AGTTATACATGCTGAAAACT+TGG + chr8.4:49539703-49539722 None:intergenic 30.0%
ATAATCAGTAACTTACCAGA+CGG - chr8.4:49538285-49538304 MS.gene38943:CDS 30.0%
ATATGTTATCTAATGTGCCA+AGG - chr8.4:49540651-49540670 MS.gene38943:CDS 30.0%
ATTACAAAAACTTGCAGCAT+AGG + chr8.4:49540143-49540162 None:intergenic 30.0%
ATTCAATTTAAAGGACTACG+AGG - chr8.4:49540515-49540534 MS.gene38943:CDS 30.0%
ATTCTTGAAAAAGTAGATCG+TGG + chr8.4:49540043-49540062 None:intergenic 30.0%
CTTAAGAAAAGACTTAACCT+GGG + chr8.4:49539849-49539868 None:intergenic 30.0%
CTTAGTATTCTATTGGACTT+AGG - chr8.4:49538796-49538815 MS.gene38943:CDS 30.0%
GAGTCTTCTTAGTATTCTAT+TGG - chr8.4:49538789-49538808 MS.gene38943:CDS 30.0%
TAAATTGAATAAAGGTCAGG+TGG + chr8.4:49540505-49540524 None:intergenic 30.0%
TATGTTATCTAATGTGCCAA+GGG - chr8.4:49540652-49540671 MS.gene38943:CDS 30.0%
TTCTTGAAAAAGTAGATCGT+GGG + chr8.4:49540042-49540061 None:intergenic 30.0%
! AAATTGGTAATTGTTGCTGT+AGG + chr8.4:49540439-49540458 None:intergenic 30.0%
! ATGTTAAGGTACTCAAGATT+CGG + chr8.4:49539662-49539681 None:intergenic 30.0%
! CAGCAACAATTACCAATTTT+AGG - chr8.4:49540440-49540459 MS.gene38943:CDS 30.0%
! TCGACATGAACAAATTTTAG+AGG - chr8.4:49539283-49539302 MS.gene38943:CDS 30.0%
! TTTTGTAATTCAGAACGACA+AGG - chr8.4:49540154-49540173 MS.gene38943:intron 30.0%
!! ATTTTAAGCCTTTTCAAGGA+AGG + chr8.4:49539596-49539615 None:intergenic 30.0%
!! GTTATCGATTCAACACATAA+AGG + chr8.4:49539029-49539048 None:intergenic 30.0%
!!! GGACTTTCTTGTTTTGTTTT+AGG + chr8.4:49539309-49539328 None:intergenic 30.0%
AAACTGATAATCATCACGAG+TGG + chr8.4:49538565-49538584 None:intergenic 35.0%
AACATTACCGGAATCACATT+CGG - chr8.4:49539677-49539696 MS.gene38943:intron 35.0%
AAGATGCTGCTAATCAACAT+TGG - chr8.4:49539464-49539483 MS.gene38943:CDS 35.0%
ACACATATTCCTTCTATGAG+TGG - chr8.4:49538991-49539010 MS.gene38943:intron 35.0%
AGTATTCTATTGGACTTAGG+TGG - chr8.4:49538799-49538818 MS.gene38943:CDS 35.0%
ATGTGATTCCGGTAATGTTA+AGG + chr8.4:49539676-49539695 None:intergenic 35.0%
ATTAGCAGCATCTTTAGTGA+AGG + chr8.4:49539458-49539477 None:intergenic 35.0%
CAAACTTTGTCTAAGCTTTG+CGG + chr8.4:49539566-49539585 None:intergenic 35.0%
CATTTGTAGAGAGAGTAAGT+TGG - chr8.4:49539889-49539908 MS.gene38943:intron 35.0%
CTTGAGTACCTTAACATTAC+CGG - chr8.4:49539665-49539684 MS.gene38943:intron 35.0%
GAGTAAGGTTAAGTTCTTCA+AGG + chr8.4:49538635-49538654 None:intergenic 35.0%
GCTAATCAACATTGGTCATA+TGG - chr8.4:49539472-49539491 MS.gene38943:CDS 35.0%
GTAAGGGATGAAAGATAAGT+GGG + chr8.4:49538430-49538449 None:intergenic 35.0%
GTATTCTATTGGACTTAGGT+GGG - chr8.4:49538800-49538819 MS.gene38943:CDS 35.0%
TAGTTCGGAATATTGTTGTG+TGG - chr8.4:49538852-49538871 MS.gene38943:CDS 35.0%
TCATGTGGCAAATTTGTACA+TGG - chr8.4:49539050-49539069 MS.gene38943:intron 35.0%
TCTTGAAAAAGTAGATCGTG+GGG + chr8.4:49540041-49540060 None:intergenic 35.0%
TGTAAGGGATGAAAGATAAG+TGG + chr8.4:49538431-49538450 None:intergenic 35.0%
TGTTAACATCCAACACTCTA+CGG - chr8.4:49539421-49539440 MS.gene38943:CDS 35.0%
! CATGTATAACTTGCACAATG+TGG - chr8.4:49539712-49539731 MS.gene38943:intron 35.0%
! GATTATTGCTGTTAGATCCT+TGG - chr8.4:49540601-49540620 MS.gene38943:CDS 35.0%
! GGTGATTTTAAGCCTTTTCA+AGG + chr8.4:49539600-49539619 None:intergenic 35.0%
! GTCGAGTATGTTTTGCAAAA+AGG - chr8.4:49540560-49540579 MS.gene38943:CDS 35.0%
! TTTAAAACGTTCGGACTGAT+GGG + chr8.4:49538454-49538473 None:intergenic 35.0%
!! CATTTGTTGGAAGTGGTTTT+AGG - chr8.4:49538954-49538973 MS.gene38943:intron 35.0%
!! GATTCGGTGCATTTATTTCA+AGG + chr8.4:49539646-49539665 None:intergenic 35.0%
!!! AGCGAAGGTTTTAAAACGTT+CGG + chr8.4:49538463-49538482 None:intergenic 35.0%
!!! TTTTAAAACGTTCGGACTGA+TGG + chr8.4:49538455-49538474 None:intergenic 35.0%
AACTAATCACCGTAGAGTGT+TGG + chr8.4:49539433-49539452 None:intergenic 40.0%
AATCATACCTGAGCGAAATG+AGG + chr8.4:49538719-49538738 None:intergenic 40.0%
AGGTTAAGTTCTTCAAGGTG+AGG + chr8.4:49538630-49538649 None:intergenic 40.0%
ATCACCGTAGCAAATGTTGT+TGG - chr8.4:49539614-49539633 MS.gene38943:intron 40.0%
ATTGTTGCTGTAGGCAACAA+AGG + chr8.4:49540430-49540449 None:intergenic 40.0%
CAAAGTCAGCGAAAAGAGTA+AGG + chr8.4:49538650-49538669 None:intergenic 40.0%
CATCATCATCCACTCATAGA+AGG + chr8.4:49539003-49539022 None:intergenic 40.0%
GAAAGATAAGTGGGAGTTGT+CGG + chr8.4:49538421-49538440 None:intergenic 40.0%
GAGGAATCCAAACGAAAAAC+GGG - chr8.4:49538252-49538271 MS.gene38943:CDS 40.0%
GGAGGAATCCAAACGAAAAA+CGG - chr8.4:49538251-49538270 MS.gene38943:CDS 40.0%
GTGGCAAATTTGTACATGGT+TGG - chr8.4:49539054-49539073 MS.gene38943:intron 40.0%
GTTGAATCGATAACGTCATG+TGG - chr8.4:49539035-49539054 MS.gene38943:intron 40.0%
TATTTGTTCCTCAGTCTCTG+TGG - chr8.4:49539389-49539408 MS.gene38943:CDS 40.0%
TCACCGTAGCAAATGTTGTT+GGG - chr8.4:49539615-49539634 MS.gene38943:intron 40.0%
TCATCTTTCTAATGCCGCAA+GGG + chr8.4:49538524-49538543 None:intergenic 40.0%
! ACCTTCGCTCTTTTCGTTAA+CGG - chr8.4:49538474-49538493 MS.gene38943:CDS 40.0%
! CAATTAGGAACCCTTGTTTG+TGG + chr8.4:49540473-49540492 None:intergenic 40.0%
! CTGAAGTGAATAGCGTTTTC+GGG + chr8.4:49538692-49538711 None:intergenic 40.0%
! GAACAGAGTACTTCTTCTCT+AGG + chr8.4:49540628-49540647 None:intergenic 40.0%
! GCTGAAGTGAATAGCGTTTT+CGG + chr8.4:49538693-49538712 None:intergenic 40.0%
! GTATAACTTGCACAATGTGG+TGG - chr8.4:49539715-49539734 MS.gene38943:intron 40.0%
! TGTAAGTTGGCATGTTGTAG+AGG + chr8.4:49540678-49540697 None:intergenic 40.0%
!! AGTTGGTGTTGTACAAACAG+TGG - chr8.4:49540003-49540022 MS.gene38943:intron 40.0%
!! TAAGCCTTTTCAAGGAAGGT+GGG + chr8.4:49539592-49539611 None:intergenic 40.0%
!! TTAAGCCTTTTCAAGGAAGG+TGG + chr8.4:49539593-49539612 None:intergenic 40.0%
!! TTCATCACCCGTTTTTCGTT+TGG + chr8.4:49538262-49538281 None:intergenic 40.0%
!!! ACTCTTTTCGCTGACTTTGA+TGG - chr8.4:49538651-49538670 MS.gene38943:intron 40.0%
!!! TTTTGGTTGGTAGGAGTGAT+AGG + chr8.4:49538326-49538345 None:intergenic 40.0%
AACTTGGCCGAATGTGATTC+CGG + chr8.4:49539687-49539706 None:intergenic 45.0%
AAGCAAGCTGAGCAGAGAAT+TGG + chr8.4:49540111-49540130 None:intergenic 45.0%
ACTACGAGGATTTCCAGATG+AGG - chr8.4:49540529-49540548 MS.gene38943:CDS 45.0%
AGGTGGGATGTGAGACAATT+AGG + chr8.4:49540488-49540507 None:intergenic 45.0%
AGTTTCTTTAACCAGTGGCC+CGG - chr8.4:49539157-49539176 MS.gene38943:CDS 45.0%
ATACCTGAGCGAAATGAGGT+TGG + chr8.4:49538715-49538734 None:intergenic 45.0%
ATGTGGTTCAGTAAACCGTC+TGG + chr8.4:49538303-49538322 None:intergenic 45.0%
CACCGTAGCAAATGTTGTTG+GGG - chr8.4:49539616-49539635 MS.gene38943:intron 45.0%
GAATTTCACCACAGAGACTG+AGG + chr8.4:49539400-49539419 None:intergenic 45.0%
GAGATTGTGTAAAGCGACGA+CGG + chr8.4:49539777-49539796 None:intergenic 45.0%
GTACTTCTTCTCTAGGTCCA+AGG + chr8.4:49540621-49540640 None:intergenic 45.0%
GTCATCTTTCTAATGCCGCA+AGG + chr8.4:49538525-49538544 None:intergenic 45.0%
GTTGAGTCATTCAACAACCC+AGG - chr8.4:49539829-49539848 MS.gene38943:intron 45.0%
TCGACAAATGACACCTCATC+TGG + chr8.4:49540545-49540564 None:intergenic 45.0%
TCTCCTGCACAAAATGACGT+GGG + chr8.4:49538900-49538919 None:intergenic 45.0%
TGTGGAGCCCATCCTAAAAT+TGG + chr8.4:49540455-49540474 None:intergenic 45.0%
TTCTAATGCCGCAAGGGTTA+CGG + chr8.4:49538518-49538537 None:intergenic 45.0%
TTGGTAGGAGTGATAGGATG+TGG + chr8.4:49538320-49538339 None:intergenic 45.0%
TTGTACAAACAGTGGCTGCT+TGG - chr8.4:49540011-49540030 MS.gene38943:intron 45.0%
! ACATGGTTGGTTGACATGAC+AGG - chr8.4:49539067-49539086 MS.gene38943:intron 45.0%
! AGCCCCAACAACATTTGCTA+CGG + chr8.4:49539621-49539640 None:intergenic 45.0%
! ATGGTTGGTTGACATGACAG+GGG - chr8.4:49539069-49539088 MS.gene38943:intron 45.0%
! CATGGTTGGTTGACATGACA+GGG - chr8.4:49539068-49539087 MS.gene38943:intron 45.0%
! GGTGCTCTAATTGGTGGATA+TGG - chr8.4:49538924-49538943 MS.gene38943:intron 45.0%
! GTCGCTTTACACAATCTCCT+TGG - chr8.4:49539779-49539798 MS.gene38943:intron 45.0%
! TCATTTTGTGCAGGAGACGT+AGG - chr8.4:49538903-49538922 MS.gene38943:CDS 45.0%
AAGGGTTACGGAGAAGAACG+AGG + chr8.4:49538506-49538525 None:intergenic 50.0%
AATTGGGTTCGTGCTGCCAT+TGG - chr8.4:49538603-49538622 MS.gene38943:intron 50.0%
ACCAAAACCGCGGTTACAAC+CGG - chr8.4:49538339-49538358 MS.gene38943:CDS 50.0%
ACTCCTACCAACCAAAACCG+CGG - chr8.4:49538329-49538348 MS.gene38943:CDS 50.0%
ATTGGGTTCGTGCTGCCATT+GGG - chr8.4:49538604-49538623 MS.gene38943:intron 50.0%
CGGATAGATGCTTCCAAAGG+TGG + chr8.4:49538386-49538405 None:intergenic 50.0%
CTATATTTGGGCAGCCACAG+AGG + chr8.4:49539520-49539539 None:intergenic 50.0%
GACGTAGGTGCTCTAATTGG+TGG - chr8.4:49538918-49538937 MS.gene38943:intron 50.0%
GAGCGGATAGATGCTTCCAA+AGG + chr8.4:49538389-49538408 None:intergenic 50.0%
GATGTCTTTCCCCAATCGCT+TGG - chr8.4:49539749-49539768 MS.gene38943:intron 50.0%
GCATCCCACCTTCCTTGAAA+AGG - chr8.4:49539585-49539604 MS.gene38943:intron 50.0%
GCCGTTAACGAAAAGAGCGA+AGG + chr8.4:49538478-49538497 None:intergenic 50.0%
GGAGACGTAGGTGCTCTAAT+TGG - chr8.4:49538915-49538934 MS.gene38943:intron 50.0%
GTCTCCTGCACAAAATGACG+TGG + chr8.4:49538901-49538920 None:intergenic 50.0%
GTTCTTCTCCGTAACCCTTG+CGG - chr8.4:49538507-49538526 MS.gene38943:intron 50.0%
GTTGTCGGAGAAGTTGAGAG+CGG + chr8.4:49538406-49538425 None:intergenic 50.0%
GTTTCTTTAACCAGTGGCCC+GGG - chr8.4:49539158-49539177 MS.gene38943:CDS 50.0%
TTCGTAGTCTTCCTCCTGCT+CGG - chr8.4:49539097-49539116 MS.gene38943:intron 50.0%
TTCTTCAAGGTGAGGCCCAA+TGG + chr8.4:49538622-49538641 None:intergenic 50.0%
TTTCTTTAACCAGTGGCCCG+GGG - chr8.4:49539159-49539178 MS.gene38943:CDS 50.0%
! AGGATGGGCTCCACAAACAA+GGG - chr8.4:49540460-49540479 MS.gene38943:CDS 50.0%
! GTTCGGACTGATGGGTGTAA+GGG + chr8.4:49538446-49538465 None:intergenic 50.0%
! TAGGATGGGCTCCACAAACA+AGG - chr8.4:49540459-49540478 MS.gene38943:CDS 50.0%
!! AATCTCCTTGGTGCTCTCTC+TGG - chr8.4:49539791-49539810 MS.gene38943:intron 50.0%
!! ATCTCCTTGGTGCTCTCTCT+GGG - chr8.4:49539792-49539811 MS.gene38943:intron 50.0%
!! ATGCCCACGTCATTTTGTGC+AGG - chr8.4:49538894-49538913 MS.gene38943:CDS 50.0%
!! GTTGTAACCGCGGTTTTGGT+TGG + chr8.4:49538339-49538358 None:intergenic 50.0%
!!! TAACCGCGGTTTTGGTTGGT+AGG + chr8.4:49538335-49538354 None:intergenic 50.0%
ACGACGGAACCAAGCGATTG+GGG + chr8.4:49539761-49539780 None:intergenic 55.0%
CAGCCAACCTCATTTCGCTC+AGG - chr8.4:49538709-49538728 MS.gene38943:intron 55.0%
GACGACGGAACCAAGCGATT+GGG + chr8.4:49539762-49539781 None:intergenic 55.0%
GTTAACCAGTGTCCTACCCC+CGG + chr8.4:49539179-49539198 None:intergenic 55.0%
TCCGTGAATGCACTCCTCTG+TGG - chr8.4:49539503-49539522 MS.gene38943:CDS 55.0%
TGGCATGTTGTAGAGGCCCT+TGG + chr8.4:49540671-49540690 None:intergenic 55.0%
TTAACCAGTGTCCTACCCCC+GGG + chr8.4:49539178-49539197 None:intergenic 55.0%
TTCTTTAACCAGTGGCCCGG+GGG - chr8.4:49539160-49539179 MS.gene38943:CDS 55.0%
! CAGAGGAGTGCATTCACGGA+AGG + chr8.4:49539503-49539522 None:intergenic 55.0%
! CGTTCGGACTGATGGGTGTA+AGG + chr8.4:49538447-49538466 None:intergenic 55.0%
! GCCACAGAGGAGTGCATTCA+CGG + chr8.4:49539507-49539526 None:intergenic 55.0%
!! TAGTCCCAGAGAGAGCACCA+AGG + chr8.4:49539799-49539818 None:intergenic 55.0%
AGTCTTCCTCCTGCTCGGCA+GGG - chr8.4:49539102-49539121 MS.gene38943:CDS 60.0%
CGACGACGGAACCAAGCGAT+TGG + chr8.4:49539763-49539782 None:intergenic 60.0%
GCTTCCAAAGGTGGCGCCAT+CGG + chr8.4:49538377-49538396 None:intergenic 60.0%
TAGACGGCCGGTTGTAACCG+CGG + chr8.4:49538349-49538368 None:intergenic 60.0%
TAGTCTTCCTCCTGCTCGGC+AGG - chr8.4:49539101-49539120 MS.gene38943:intron 60.0%
! GCCGGTTGTAACCGCGGTTT+TGG + chr8.4:49538343-49538362 None:intergenic 60.0%
ATCACCCAACCCTGCCGAGC+AGG + chr8.4:49539114-49539133 None:intergenic 65.0%
CCATCGGCGAGATAGACGGC+CGG + chr8.4:49538361-49538380 None:intergenic 65.0%
GGCGCCATCGGCGAGATAGA+CGG + chr8.4:49538365-49538384 None:intergenic 65.0%
TCCTCCTGCTCGGCAGGGTT+GGG - chr8.4:49539107-49539126 MS.gene38943:CDS 65.0%
TTAACCAGTGGCCCGGGGGT+AGG - chr8.4:49539164-49539183 MS.gene38943:CDS 65.0%
TTCCTCCTGCTCGGCAGGGT+TGG - chr8.4:49539106-49539125 MS.gene38943:CDS 65.0%
ACCCAACCCTGCCGAGCAGG+AGG + chr8.4:49539111-49539130 None:intergenic 70.0%
CCGGCCGTCTATCTCGCCGA+TGG - chr8.4:49538358-49538377 MS.gene38943:CDS 70.0%
CTCGCCGATGGCGCCACCTT+TGG - chr8.4:49538370-49538389 MS.gene38943:CDS 70.0%
GTGGCCCGGGGGTAGGACAC+TGG - chr8.4:49539171-49539190 MS.gene38943:CDS 75.0%
GTGTCCTACCCCCGGGCCAC+TGG + chr8.4:49539171-49539190 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 49538246 49540706 49538246 ID=MS.gene38943
chr8.4 mRNA 49538246 49540706 49538246 ID=MS.gene38943.t1;Parent=MS.gene38943
chr8.4 exon 49540222 49540706 49540222 ID=MS.gene38943.t1.exon1;Parent=MS.gene38943.t1
chr8.4 CDS 49540222 49540706 49540222 ID=cds.MS.gene38943.t1;Parent=MS.gene38943.t1
chr8.4 exon 49539102 49539549 49539102 ID=MS.gene38943.t1.exon2;Parent=MS.gene38943.t1
chr8.4 CDS 49539102 49539549 49539102 ID=cds.MS.gene38943.t1;Parent=MS.gene38943.t1
chr8.4 exon 49538777 49538929 49538777 ID=MS.gene38943.t1.exon3;Parent=MS.gene38943.t1
chr8.4 CDS 49538777 49538929 49538777 ID=cds.MS.gene38943.t1;Parent=MS.gene38943.t1
chr8.4 exon 49538246 49538509 49538246 ID=MS.gene38943.t1.exon4;Parent=MS.gene38943.t1
chr8.4 CDS 49538246 49538509 49538246 ID=cds.MS.gene38943.t1;Parent=MS.gene38943.t1
Gene Sequence

>MS.gene38943

ATGGCGGAGGAATCCAAACGAAAAACGGGTGATGAAGACATAATCAGTAACTTACCAGACGGTTTACTGAACCACATCCTATCACTCCTACCAACCAAAACCGCGGTTACAACCGGCCGTCTATCTCGCCGATGGCGCCACCTTTGGAAGCATCTATCCGCTCTCAACTTCTCCGACAACTCCCACTTATCTTTCATCCCTTACACCCATCAGTCCGAACGTTTTAAAACCTTCGCTCTTTTCGTTAACGGCGTCTTCCTCGTTCTTCTCCGTAACCCTTGCGGCATTAGAAAGATGACTCTCGATTGTGCTCACTCCACTCGTGATGATTATCAGTTTCGTGAATATTCTGTTGATAATTGGGTTCGTGCTGCCATTGGGCCTCACCTTGAAGAACTTAACCTTACTCTTTTCGCTGACTTTGATGGTTCTGATTTCAAGCTCCCGAAAACGCTATTCACTTCAGCCAACCTCATTTCGCTCAGGTATGATTGTATACACATTCTGAAATAATCTGAAATGACGAATTTGAAATTGATTAGCGAGTCTTCTTAGTATTCTATTGGACTTAGGTGGGAAAAAAAAATGAGAGTTTAGGTTTCTTATTAGTTCGGAATATTGTTGTGTGGTCTTTGTGAAGATCACGAAATGCCCACGTCATTTTGTGCAGGAGACGTAGGTGCTCTAATTGGTGGATATGGTTAAATTCATTTGTTGGAAGTGGTTTTAGGAAAACATTTTAGTTACACATATTCCTTCTATGAGTGGATGATGATGAACCCTTTATGTGTTGAATCGATAACGTCATGTGGCAAATTTGTACATGGTTGGTTGACATGACAGGGGTTCTGTTCGTAGTCTTCCTCCTGCTCGGCAGGGTTGGGTGATATTTTTTAAAACTTCCTTTTTTTAGTTTCTTTAACCAGTGGCCCGGGGGTAGGACACTGGTTAACATGACCCTTTTTATAATAGGTAGAATATGTAATTGTAGTTCTTTTGATGTTGGTTACACAATGACTGAAACAATAATTATACATTCGACATGAACAAATTTTAGAGGCCTAAAACAAAACAAGAAAGTCCAAGAACAAAAACTACTATATTTGATTTTGTTGGTTTCTGAATTGTGATATAACATTTACTTATTTGTTCCTCAGTCTCTGTGGTGAAATTCGTGTTAACATCCAACACTCTACGGTGATTAGTTTACCTTCACTAAAGATGCTGCTAATCAACATTGGTCATATGGAAGTACCTTCCGTGAATGCACTCCTCTGTGGCTGCCCAAATATAGAATCTCTGAATCTTGGCTTTTCTCCGCAAAGCTTAGACAAAGTTTGCATCCCACCTTCCTTGAAAAGGCTTAAAATCACCGTAGCAAATGTTGTTGGGGCTTACCTTGAAATAAATGCACCGAATCTTGAGTACCTTAACATTACCGGAATCACATTCGGCCAAGTTTTCAGCATGTATAACTTGCACAATGTGGTGGAAGCGTATCTTGATGTCTTTCCCCAATCGCTTGGTTCCGTCGTCGCTTTACACAATCTCCTTGGTGCTCTCTCTGGGACTAAACATTTAGTGTTGAGTCATTCAACAACCCAGGTTAAGTCTTTTCTTAAGTTATTTTATGTTTATGTCATCATTTGTAGAGAGAGTAAGTTGGTAACTACCTATTAATAAACTATTAACTAACTTTAACTCTATTAATCATCATTTATTTATATATAGATAGATATATTTTTGTACTAATTAGTAGTTGGTGTTGTACAAACAGTGGCTGCTTGGTGAACCCCACGATCTACTTTTTCAAGAATTTCACTATTTGATACGTCTAGAGCTCATTCTTCTCTCGTTTAACTCCAATTCTCTGCTCAGCTTGCTTCAGAAATGTCCTATGCTGCAAGTTTTTGTAATTCAGAACGACAAGGTTTGTATAATCGAAGCTTAATCTGCTCTATATAACTTTGATGTGAAATTAACCAATTTTTATGAAATAGATTACACGAATTAGAAGTTGTATCTTATTGCACAATACACCACTATATAACTTTGATGTGAAATTAACCAATTTTTATGAAATAGATTACACGAATTAGAAGTTGTATCTTATTGCACAATACACCACTTAATATATAACATGATTAATTCATTACTATGAATATTGCATCTTATTCAAGTCCTTTGTTGCCTACAGCAACAATTACCAATTTTAGGATGGGCTCCACAAACAAGGGTTCCTAATTGTCTCACATCCCACCTGACCTTTATTCAATTTAAAGGACTACGAGGATTTCCAGATGAGGTGTCATTTGTCGAGTATGTTTTGCAAAAAGGACTTGTTTTAAAAACAATGATTATTGCTGTTAGATCCTTGGACCTAGAGAAGAAGTACTCTGTTCTCAATATGTTATCTAATGTGCCAAGGGCCTCTACAACATGCCAACTTACATTTGATTGA

Protein sequence

>MS.gene38943.t1

MAEESKRKTGDEDIISNLPDGLLNHILSLLPTKTAVTTGRLSRRWRHLWKHLSALNFSDNSHLSFIPYTHQSERFKTFALFVNGVFLVLLRNPCGIRKMTLDCAHSTRDDYQFREYSVDNWVRAAIGPHLEELNLTLFADFDGSDFKLPKTLFTSANLISLSLCGEIRVNIQHSTVISLPSLKMLLINIGHMEVPSVNALLCGCPNIESLNLGFSPQSLDKVCIPPSLKRLKITVANVVGAYLEINAPNLEYLNITGITFGQVFSMYNLHNVVEAYLDVFPQSLGSVVALHNLLGALSGTKHLVLSHSTTQWLLGEPHDLLFQEFHYLIRLELILLSFNSNSLLSLLQKCPMLQVFVIQNDKQQLPILGWAPQTRVPNCLTSHLTFIQFKGLRGFPDEVSFVEYVLQKGLVLKTMIIAVRSLDLEKKYSVLNMLSNVPRASTTCQLTFD