Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41389.t1 | XP_024625384.1 | 97.3 | 259 | 7 | 0 | 28 | 286 | 9 | 267 | 1.40E-136 | 495.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41389.t1 | Q99JY4 | 28.2 | 174 | 106 | 4 | 66 | 225 | 135 | 303 | 4.3e-09 | 63.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41389.t1 | G7IAR4 | 96.5 | 255 | 7 | 1 | 32 | 286 | 128 | 380 | 5.7e-132 | 479.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene41389 | 0.8944 | 2.56E-75 | -1.69E-46 |
| MS.gene049171 | MS.gene41389 | 0.867111 | 1.74E-65 | -1.69E-46 |
| MS.gene049217 | MS.gene41389 | 0.842555 | 2.41E-58 | -1.69E-46 |
| MS.gene049222 | MS.gene41389 | 0.862365 | 5.33E-64 | -1.69E-46 |
| MS.gene049285 | MS.gene41389 | 0.843452 | 1.39E-58 | -1.69E-46 |
| MS.gene049320 | MS.gene41389 | 0.826395 | 2.78E-54 | -1.69E-46 |
| MS.gene049396 | MS.gene41389 | 0.807114 | 5.92E-50 | -1.69E-46 |
| MS.gene049488 | MS.gene41389 | 0.806618 | 7.54E-50 | -1.69E-46 |
| MS.gene049609 | MS.gene41389 | 0.893698 | 4.93E-75 | -1.69E-46 |
| MS.gene049633 | MS.gene41389 | 0.838064 | 3.59E-57 | -1.69E-46 |
| MS.gene049805 | MS.gene41389 | 0.878822 | 2.06E-69 | -1.69E-46 |
| MS.gene050170 | MS.gene41389 | 0.832156 | 1.11E-55 | -1.69E-46 |
| MS.gene050323 | MS.gene41389 | 0.831795 | 1.36E-55 | -1.69E-46 |
| MS.gene050444 | MS.gene41389 | 0.808052 | 3.74E-50 | -1.69E-46 |
| MS.gene050504 | MS.gene41389 | 0.822841 | 1.91E-53 | -1.69E-46 |
| MS.gene050538 | MS.gene41389 | 0.865696 | 4.90E-65 | -1.69E-46 |
| MS.gene050577 | MS.gene41389 | 0.843408 | 1.43E-58 | -1.69E-46 |
| MS.gene050593 | MS.gene41389 | 0.855704 | 5.28E-62 | -1.69E-46 |
| MS.gene050612 | MS.gene41389 | 0.819538 | 1.10E-52 | -1.69E-46 |
| MS.gene050670 | MS.gene41389 | 0.843418 | 1.42E-58 | -1.69E-46 |
| MS.gene050675 | MS.gene41389 | 0.807668 | 4.52E-50 | -1.69E-46 |
| MS.gene050690 | MS.gene41389 | 0.828419 | 9.09E-55 | -1.69E-46 |
| MS.gene050699 | MS.gene41389 | 0.836569 | 8.67E-57 | -1.69E-46 |
| MS.gene050747 | MS.gene41389 | 0.883971 | 2.85E-71 | -1.69E-46 |
| MS.gene050772 | MS.gene41389 | 0.884009 | 2.76E-71 | -1.69E-46 |
| MS.gene05080 | MS.gene41389 | 0.858354 | 8.73E-63 | -1.69E-46 |
| MS.gene05081 | MS.gene41389 | 0.900222 | 9.09E-78 | -1.69E-46 |
| MS.gene050868 | MS.gene41389 | 0.827201 | 1.78E-54 | -1.69E-46 |
| MS.gene050871 | MS.gene41389 | 0.826988 | 2.01E-54 | -1.69E-46 |
| MS.gene050950 | MS.gene41389 | 0.8724 | 3.27E-67 | -1.69E-46 |
| MS.gene05105 | MS.gene41389 | 0.850126 | 2.08E-60 | -1.69E-46 |
| MS.gene051113 | MS.gene41389 | -0.802578 | 5.25E-49 | -1.69E-46 |
| MS.gene051167 | MS.gene41389 | -0.831904 | 1.28E-55 | -1.69E-46 |
| MS.gene051317 | MS.gene41389 | 0.826149 | 3.18E-54 | -1.69E-46 |
| MS.gene051387 | MS.gene41389 | 0.86492 | 8.59E-65 | -1.69E-46 |
| MS.gene051438 | MS.gene41389 | 0.824984 | 6.00E-54 | -1.69E-46 |
| MS.gene051551 | MS.gene41389 | 0.803208 | 3.89E-49 | -1.69E-46 |
| MS.gene051666 | MS.gene41389 | 0.864517 | 1.15E-64 | -1.69E-46 |
| MS.gene051692 | MS.gene41389 | 0.801381 | 9.25E-49 | -1.69E-46 |
| MS.gene051694 | MS.gene41389 | 0.828785 | 7.41E-55 | -1.69E-46 |
| MS.gene051734 | MS.gene41389 | 0.813909 | 2.02E-51 | -1.69E-46 |
| MS.gene051838 | MS.gene41389 | 0.910878 | 1.14E-82 | -1.69E-46 |
| MS.gene051858 | MS.gene41389 | 0.830913 | 2.25E-55 | -1.69E-46 |
| MS.gene051874 | MS.gene41389 | 0.805891 | 1.07E-49 | -1.69E-46 |
| MS.gene052136 | MS.gene41389 | 0.801751 | 7.77E-49 | -1.69E-46 |
| MS.gene052164 | MS.gene41389 | 0.850259 | 1.91E-60 | -1.69E-46 |
| MS.gene052322 | MS.gene41389 | 0.820625 | 6.21E-53 | -1.69E-46 |
| MS.gene052346 | MS.gene41389 | 0.817495 | 3.20E-52 | -1.69E-46 |
| MS.gene052414 | MS.gene41389 | 0.847886 | 8.71E-60 | -1.69E-46 |
| MS.gene052421 | MS.gene41389 | 0.843819 | 1.11E-58 | -1.69E-46 |
| MS.gene052481 | MS.gene41389 | 0.848034 | 7.93E-60 | -1.69E-46 |
| MS.gene052482 | MS.gene41389 | 0.807456 | 5.01E-50 | -1.69E-46 |
| MS.gene052484 | MS.gene41389 | 0.84727 | 1.29E-59 | -1.69E-46 |
| MS.gene052486 | MS.gene41389 | 0.815156 | 1.07E-51 | -1.69E-46 |
| MS.gene052501 | MS.gene41389 | 0.873053 | 1.98E-67 | -1.69E-46 |
| MS.gene052503 | MS.gene41389 | 0.880295 | 6.17E-70 | -1.69E-46 |
| MS.gene052504 | MS.gene41389 | 0.814847 | 1.25E-51 | -1.69E-46 |
| MS.gene052505 | MS.gene41389 | 0.876255 | 1.61E-68 | -1.69E-46 |
| MS.gene052506 | MS.gene41389 | 0.856478 | 3.13E-62 | -1.69E-46 |
| MS.gene052615 | MS.gene41389 | 0.890051 | 1.40E-73 | -1.69E-46 |
| MS.gene052820 | MS.gene41389 | 0.843126 | 1.70E-58 | -1.69E-46 |
| MS.gene052822 | MS.gene41389 | 0.847974 | 8.23E-60 | -1.69E-46 |
| MS.gene052823 | MS.gene41389 | 0.875547 | 2.83E-68 | -1.69E-46 |
| MS.gene052825 | MS.gene41389 | 0.874806 | 5.06E-68 | -1.69E-46 |
| MS.gene052870 | MS.gene41389 | 0.820733 | 5.87E-53 | -1.69E-46 |
| MS.gene052872 | MS.gene41389 | 0.832101 | 1.15E-55 | -1.69E-46 |
| MS.gene052966 | MS.gene41389 | 0.829844 | 4.10E-55 | -1.69E-46 |
| MS.gene052982 | MS.gene41389 | 0.862286 | 5.64E-64 | -1.69E-46 |
| MS.gene052986 | MS.gene41389 | 0.8057 | 1.18E-49 | -1.69E-46 |
| MS.gene052987 | MS.gene41389 | 0.803423 | 3.51E-49 | -1.69E-46 |
| MS.gene053103 | MS.gene41389 | 0.834158 | 3.52E-56 | -1.69E-46 |
| MS.gene053104 | MS.gene41389 | 0.839178 | 1.85E-57 | -1.69E-46 |
| MS.gene053117 | MS.gene41389 | 0.844899 | 5.68E-59 | -1.69E-46 |
| MS.gene053203 | MS.gene41389 | 0.848938 | 4.45E-60 | -1.69E-46 |
| MS.gene053207 | MS.gene41389 | 0.87073 | 1.17E-66 | -1.69E-46 |
| MS.gene053213 | MS.gene41389 | 0.855422 | 6.38E-62 | -1.69E-46 |
| MS.gene053286 | MS.gene41389 | 0.848266 | 6.84E-60 | -1.69E-46 |
| MS.gene053421 | MS.gene41389 | -0.81952 | 1.11E-52 | -1.69E-46 |
| MS.gene053436 | MS.gene41389 | 0.836175 | 1.09E-56 | -1.69E-46 |
| MS.gene053449 | MS.gene41389 | 0.821035 | 5.00E-53 | -1.69E-46 |
| MS.gene053479 | MS.gene41389 | 0.834628 | 2.68E-56 | -1.69E-46 |
| MS.gene053480 | MS.gene41389 | 0.879048 | 1.71E-69 | -1.69E-46 |
| MS.gene053574 | MS.gene41389 | 0.858701 | 6.88E-63 | -1.69E-46 |
| MS.gene053579 | MS.gene41389 | 0.828638 | 8.04E-55 | -1.69E-46 |
| MS.gene053626 | MS.gene41389 | 0.851728 | 7.35E-61 | -1.69E-46 |
| MS.gene053632 | MS.gene41389 | 0.882127 | 1.35E-70 | -1.69E-46 |
| MS.gene053824 | MS.gene41389 | 0.872501 | 3.03E-67 | -1.69E-46 |
| MS.gene053912 | MS.gene41389 | 0.805434 | 1.34E-49 | -1.69E-46 |
| MS.gene053916 | MS.gene41389 | 0.854551 | 1.14E-61 | -1.69E-46 |
| MS.gene054003 | MS.gene41389 | 0.833229 | 6.01E-56 | -1.69E-46 |
| MS.gene054408 | MS.gene41389 | 0.842823 | 2.04E-58 | -1.69E-46 |
| MS.gene054595 | MS.gene41389 | 0.85245 | 4.58E-61 | -1.69E-46 |
| MS.gene054600 | MS.gene41389 | 0.858918 | 5.92E-63 | -1.69E-46 |
| MS.gene054642 | MS.gene41389 | 0.840145 | 1.04E-57 | -1.69E-46 |
| MS.gene054706 | MS.gene41389 | -0.82063 | 6.20E-53 | -1.69E-46 |
| MS.gene05470 | MS.gene41389 | 0.820741 | 5.85E-53 | -1.69E-46 |
| MS.gene054927 | MS.gene41389 | 0.860535 | 1.93E-63 | -1.69E-46 |
| MS.gene05494 | MS.gene41389 | 0.845146 | 4.87E-59 | -1.69E-46 |
| MS.gene054954 | MS.gene41389 | 0.81526 | 1.01E-51 | -1.69E-46 |
| MS.gene05505 | MS.gene41389 | 0.855921 | 4.56E-62 | -1.69E-46 |
| MS.gene055206 | MS.gene41389 | 0.893244 | 7.53E-75 | -1.69E-46 |
| MS.gene055224 | MS.gene41389 | 0.846704 | 1.84E-59 | -1.69E-46 |
| MS.gene055289 | MS.gene41389 | 0.865489 | 5.69E-65 | -1.69E-46 |
| MS.gene055362 | MS.gene41389 | 0.83817 | 3.37E-57 | -1.69E-46 |
| MS.gene055370 | MS.gene41389 | 0.807173 | 5.75E-50 | -1.69E-46 |
| MS.gene055486 | MS.gene41389 | 0.845787 | 3.27E-59 | -1.69E-46 |
| MS.gene055502 | MS.gene41389 | 0.866303 | 3.15E-65 | -1.69E-46 |
| MS.gene055577 | MS.gene41389 | 0.870697 | 1.20E-66 | -1.69E-46 |
| MS.gene055722 | MS.gene41389 | 0.83402 | 3.81E-56 | -1.69E-46 |
| MS.gene055741 | MS.gene41389 | 0.811826 | 5.76E-51 | -1.69E-46 |
| MS.gene055744 | MS.gene41389 | 0.809706 | 1.66E-50 | -1.69E-46 |
| MS.gene055748 | MS.gene41389 | 0.813953 | 1.97E-51 | -1.69E-46 |
| MS.gene055750 | MS.gene41389 | 0.803008 | 4.28E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene41389 | 0.82864 | 8.03E-55 | -1.69E-46 |
| MS.gene055909 | MS.gene41389 | 0.810106 | 1.36E-50 | -1.69E-46 |
| MS.gene055911 | MS.gene41389 | 0.811408 | 7.11E-51 | -1.69E-46 |
| MS.gene05592 | MS.gene41389 | 0.818736 | 1.68E-52 | -1.69E-46 |
| MS.gene055941 | MS.gene41389 | 0.86541 | 6.03E-65 | -1.69E-46 |
| MS.gene056040 | MS.gene41389 | 0.816736 | 4.74E-52 | -1.69E-46 |
| MS.gene056166 | MS.gene41389 | 0.849747 | 2.65E-60 | -1.69E-46 |
| MS.gene056374 | MS.gene41389 | 0.801557 | 8.51E-49 | -1.69E-46 |
| MS.gene056387 | MS.gene41389 | 0.808849 | 2.53E-50 | -1.69E-46 |
| MS.gene056448 | MS.gene41389 | 0.818149 | 2.28E-52 | -1.69E-46 |
| MS.gene056487 | MS.gene41389 | 0.834679 | 2.61E-56 | -1.69E-46 |
| MS.gene056504 | MS.gene41389 | 0.832495 | 9.15E-56 | -1.69E-46 |
| MS.gene056510 | MS.gene41389 | 0.816788 | 4.62E-52 | -1.69E-46 |
| MS.gene056511 | MS.gene41389 | 0.845202 | 4.70E-59 | -1.69E-46 |
| MS.gene056610 | MS.gene41389 | 0.822347 | 2.49E-53 | -1.69E-46 |
| MS.gene05664 | MS.gene41389 | 0.838136 | 3.44E-57 | -1.69E-46 |
| MS.gene056657 | MS.gene41389 | 0.823936 | 1.06E-53 | -1.69E-46 |
| MS.gene05666 | MS.gene41389 | 0.824574 | 7.50E-54 | -1.69E-46 |
| MS.gene056692 | MS.gene41389 | 0.829861 | 4.06E-55 | -1.69E-46 |
| MS.gene056782 | MS.gene41389 | 0.800714 | 1.27E-48 | -1.69E-46 |
| MS.gene056877 | MS.gene41389 | 0.827506 | 1.51E-54 | -1.69E-46 |
| MS.gene056898 | MS.gene41389 | 0.801145 | 1.03E-48 | -1.69E-46 |
| MS.gene057048 | MS.gene41389 | 0.838964 | 2.10E-57 | -1.69E-46 |
| MS.gene057076 | MS.gene41389 | 0.859643 | 3.59E-63 | -1.69E-46 |
| MS.gene057086 | MS.gene41389 | 0.819171 | 1.34E-52 | -1.69E-46 |
| MS.gene057124 | MS.gene41389 | 0.833407 | 5.43E-56 | -1.69E-46 |
| MS.gene057146 | MS.gene41389 | 0.809696 | 1.67E-50 | -1.69E-46 |
| MS.gene057196 | MS.gene41389 | 0.805348 | 1.39E-49 | -1.69E-46 |
| MS.gene057289 | MS.gene41389 | 0.803526 | 3.34E-49 | -1.69E-46 |
| MS.gene057331 | MS.gene41389 | 0.814856 | 1.24E-51 | -1.69E-46 |
| MS.gene057332 | MS.gene41389 | 0.812186 | 4.81E-51 | -1.69E-46 |
| MS.gene057416 | MS.gene41389 | 0.870797 | 1.11E-66 | -1.69E-46 |
| MS.gene057658 | MS.gene41389 | 0.879241 | 1.46E-69 | -1.69E-46 |
| MS.gene057734 | MS.gene41389 | 0.834055 | 3.74E-56 | -1.69E-46 |
| MS.gene057749 | MS.gene41389 | 0.80965 | 1.70E-50 | -1.69E-46 |
| MS.gene057823 | MS.gene41389 | 0.831919 | 1.27E-55 | -1.69E-46 |
| MS.gene057831 | MS.gene41389 | 0.850294 | 1.86E-60 | -1.69E-46 |
| MS.gene057856 | MS.gene41389 | 0.856034 | 4.22E-62 | -1.69E-46 |
| MS.gene057857 | MS.gene41389 | 0.805254 | 1.46E-49 | -1.69E-46 |
| MS.gene05787 | MS.gene41389 | 0.82371 | 1.20E-53 | -1.69E-46 |
| MS.gene057926 | MS.gene41389 | 0.801534 | 8.60E-49 | -1.69E-46 |
| MS.gene058006 | MS.gene41389 | 0.820925 | 5.30E-53 | -1.69E-46 |
| MS.gene058019 | MS.gene41389 | 0.837502 | 5.01E-57 | -1.69E-46 |
| MS.gene058120 | MS.gene41389 | 0.800023 | 1.75E-48 | -1.69E-46 |
| MS.gene058130 | MS.gene41389 | 0.841255 | 5.31E-58 | -1.69E-46 |
| MS.gene058157 | MS.gene41389 | 0.812449 | 4.22E-51 | -1.69E-46 |
| MS.gene058338 | MS.gene41389 | 0.846309 | 2.36E-59 | -1.69E-46 |
| MS.gene058376 | MS.gene41389 | 0.856453 | 3.18E-62 | -1.69E-46 |
| MS.gene05837 | MS.gene41389 | 0.852194 | 5.42E-61 | -1.69E-46 |
| MS.gene058418 | MS.gene41389 | -0.802847 | 4.62E-49 | -1.69E-46 |
| MS.gene058419 | MS.gene41389 | 0.862668 | 4.31E-64 | -1.69E-46 |
| MS.gene058444 | MS.gene41389 | 0.817587 | 3.05E-52 | -1.69E-46 |
| MS.gene058544 | MS.gene41389 | 0.853703 | 2.00E-61 | -1.69E-46 |
| MS.gene058700 | MS.gene41389 | 0.818672 | 1.73E-52 | -1.69E-46 |
| MS.gene058773 | MS.gene41389 | 0.821613 | 3.68E-53 | -1.69E-46 |
| MS.gene058838 | MS.gene41389 | 0.903845 | 2.28E-79 | -1.69E-46 |
| MS.gene05883 | MS.gene41389 | 0.809378 | 1.95E-50 | -1.69E-46 |
| MS.gene058948 | MS.gene41389 | 0.825991 | 3.46E-54 | -1.69E-46 |
| MS.gene059022 | MS.gene41389 | 0.810564 | 1.08E-50 | -1.69E-46 |
| MS.gene059023 | MS.gene41389 | 0.882328 | 1.14E-70 | -1.69E-46 |
| MS.gene05914 | MS.gene41389 | 0.830078 | 3.60E-55 | -1.69E-46 |
| MS.gene05934 | MS.gene41389 | 0.863139 | 3.08E-64 | -1.69E-46 |
| MS.gene059367 | MS.gene41389 | 0.820421 | 6.92E-53 | -1.69E-46 |
| MS.gene059368 | MS.gene41389 | 0.804173 | 2.45E-49 | -1.69E-46 |
| MS.gene059455 | MS.gene41389 | 0.855309 | 6.88E-62 | -1.69E-46 |
| MS.gene059536 | MS.gene41389 | 0.802104 | 6.57E-49 | -1.69E-46 |
| MS.gene059667 | MS.gene41389 | 0.85212 | 5.68E-61 | -1.69E-46 |
| MS.gene059677 | MS.gene41389 | 0.837167 | 6.10E-57 | -1.69E-46 |
| MS.gene059718 | MS.gene41389 | 0.87169 | 5.64E-67 | -1.69E-46 |
| MS.gene059756 | MS.gene41389 | 0.822545 | 2.24E-53 | -1.69E-46 |
| MS.gene059801 | MS.gene41389 | 0.833768 | 4.41E-56 | -1.69E-46 |
| MS.gene059865 | MS.gene41389 | 0.803426 | 3.51E-49 | -1.69E-46 |
| MS.gene059902 | MS.gene41389 | 0.824285 | 8.77E-54 | -1.69E-46 |
| MS.gene06000 | MS.gene41389 | 0.802096 | 6.60E-49 | -1.69E-46 |
| MS.gene060403 | MS.gene41389 | 0.844275 | 8.36E-59 | -1.69E-46 |
| MS.gene060482 | MS.gene41389 | 0.81516 | 1.07E-51 | -1.69E-46 |
| MS.gene060485 | MS.gene41389 | 0.841262 | 5.29E-58 | -1.69E-46 |
| MS.gene060762 | MS.gene41389 | 0.841187 | 5.53E-58 | -1.69E-46 |
| MS.gene060778 | MS.gene41389 | 0.809005 | 2.34E-50 | -1.69E-46 |
| MS.gene06077 | MS.gene41389 | 0.833269 | 5.88E-56 | -1.69E-46 |
| MS.gene060804 | MS.gene41389 | 0.820977 | 5.16E-53 | -1.69E-46 |
| MS.gene060835 | MS.gene41389 | 0.869866 | 2.25E-66 | -1.69E-46 |
| MS.gene060837 | MS.gene41389 | 0.845168 | 4.80E-59 | -1.69E-46 |
| MS.gene06092 | MS.gene41389 | 0.888782 | 4.35E-73 | -1.69E-46 |
| MS.gene060982 | MS.gene41389 | 0.836953 | 6.92E-57 | -1.69E-46 |
| MS.gene061041 | MS.gene41389 | 0.807474 | 4.97E-50 | -1.69E-46 |
| MS.gene061150 | MS.gene41389 | 0.846684 | 1.86E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41389.t1 | MTR_1g101540 | 96.471 | 255 | 7 | 1 | 32 | 286 | 128 | 380 | 8.52e-178 | 495 |
| MS.gene41389.t1 | MTR_4g088945 | 88.764 | 89 | 6 | 2 | 126 | 212 | 236 | 322 | 1.86e-44 | 154 |
| MS.gene41389.t1 | MTR_4g046707 | 32.394 | 142 | 92 | 3 | 85 | 225 | 169 | 307 | 1.83e-18 | 84.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41389.t1 | AT5G52030 | 69.583 | 240 | 68 | 2 | 43 | 277 | 9 | 248 | 4.29e-110 | 319 |
| MS.gene41389.t1 | AT5G52030 | 68.526 | 251 | 72 | 3 | 34 | 277 | 142 | 392 | 7.70e-110 | 324 |
| MS.gene41389.t1 | AT1G05270 | 33.333 | 147 | 94 | 3 | 80 | 225 | 177 | 320 | 5.50e-19 | 86.3 |
| MS.gene41389.t1 | AT2G32340 | 34.586 | 133 | 75 | 4 | 98 | 225 | 182 | 307 | 1.32e-16 | 79.3 |
Find 56 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGTGATTGGCATTGTCTTA+TGG | 0.221376 | 1.4:-78803913 | MS.gene41389:CDS |
| AGGCTGTGAATAACTGTAAA+AGG | 0.224403 | 1.4:-78804096 | MS.gene41389:CDS |
| ACCATTTATGAATTCATATA+AGG | 0.233556 | 1.4:+78803889 | None:intergenic |
| TCAAATATTGACCGCCCTTT+TGG | 0.242909 | 1.4:-78805477 | MS.gene41389:CDS |
| AGTTGGCGCACAACTAGTTT+TGG | 0.268585 | 1.4:-78805339 | MS.gene41389:CDS |
| GGTGATTGGCATTGTCTTAT+GGG | 0.292214 | 1.4:-78803912 | MS.gene41389:CDS |
| GCCTTATATGAATTCATAAA+TGG | 0.312892 | 1.4:-78803890 | MS.gene41389:CDS |
| ATTTGTCAATATGCATTATA+CGG | 0.315462 | 1.4:-78805954 | None:intergenic |
| TCAAATGATGGGGCTTCTAT+TGG | 0.321812 | 1.4:-78803974 | MS.gene41389:CDS |
| CATGTATAAGAGGTGGCAAT+AGG | 0.370213 | 1.4:+78804272 | None:intergenic |
| GTACATACTGTTATTTCAAT+TGG | 0.373632 | 1.4:+78805308 | None:intergenic |
| ATCAGCTTGACAAACAATTA+AGG | 0.385684 | 1.4:-78805820 | MS.gene41389:CDS |
| GAGCATGGAAGGCTTTGAAT+TGG | 0.390401 | 1.4:-78805102 | MS.gene41389:CDS |
| TTGAGATTTCGAGACCTTGC+TGG | 0.392448 | 1.4:-78804004 | MS.gene41389:CDS |
| GCAGATTTCATTTCCAGAGC+TGG | 0.416909 | 1.4:-78805863 | MS.gene41389:CDS |
| TATGCACTGTTAGCTGATAC+AGG | 0.417737 | 1.4:-78804031 | MS.gene41389:CDS |
| TTTGGCATTGAGATTACTCC+TGG | 0.424534 | 1.4:-78805523 | MS.gene41389:CDS |
| AAAAGGGTGGTAGGTGTGAT+TGG | 0.444853 | 1.4:-78804079 | MS.gene41389:CDS |
| CAGATTTCATTTCCAGAGCT+GGG | 0.445745 | 1.4:-78805862 | MS.gene41389:CDS |
| TTAGTGAGGGACACGGTGAT+TGG | 0.458487 | 1.4:-78803926 | MS.gene41389:CDS |
| ATCAGGTGGTCAAACTGCTT+TGG | 0.458604 | 1.4:-78805541 | MS.gene41389:intron |
| ACTGAGTCTTCAACAATTGA+AGG | 0.472723 | 1.4:+78805929 | None:intergenic |
| TGAATTACCTCATCTCCAAA+AGG | 0.477616 | 1.4:+78805462 | None:intergenic |
| AGCATACATGATCCCAGCTC+TGG | 0.484447 | 1.4:+78805850 | None:intergenic |
| GTGGTAGGTGTGATTGGAAA+AGG | 0.496641 | 1.4:-78804073 | MS.gene41389:CDS |
| ATGATGGGGCTTCTATTGGC+TGG | 0.498393 | 1.4:-78803970 | MS.gene41389:CDS |
| CGAAAAGTGTCAGAGGAAGT+TGG | 0.501232 | 1.4:-78805356 | MS.gene41389:CDS |
| TTGTTCTGCAGTATCTTGCA+TGG | 0.505968 | 1.4:-78804135 | MS.gene41389:intron |
| GTATCTCGTTCATGTATAAG+AGG | 0.530170 | 1.4:+78804262 | None:intergenic |
| TGAGATTTCGAGACCTTGCT+GGG | 0.531713 | 1.4:-78804003 | MS.gene41389:CDS |
| GAATTACCTCATCTCCAAAA+GGG | 0.540567 | 1.4:+78805463 | None:intergenic |
| ATGTATAAGAGGTGGCAATA+GGG | 0.541218 | 1.4:+78804273 | None:intergenic |
| GTAGCTTCAGAGAGCATGGA+AGG | 0.554057 | 1.4:-78805113 | MS.gene41389:intron |
| GGCTGTGAATAACTGTAAAA+GGG | 0.564509 | 1.4:-78804095 | MS.gene41389:CDS |
| ATTGGAAAAGGCCACATGAA+TGG | 0.567386 | 1.4:-78804061 | MS.gene41389:CDS |
| CAGAAAGCAAGTTCAGATGA+TGG | 0.573617 | 1.4:-78804337 | MS.gene41389:CDS |
| CATTTCTACAAATAAGCTTG+AGG | 0.575953 | 1.4:-78805023 | MS.gene41389:intron |
| ATGGTCTCTGAAGCGGAGCA+AGG | 0.578967 | 1.4:-78804116 | MS.gene41389:CDS |
| TTATATGAATTCATAAATGG+TGG | 0.584002 | 1.4:-78803887 | MS.gene41389:CDS |
| ATAAGAGGTGGCAATAGGGA+TGG | 0.589331 | 1.4:+78804277 | None:intergenic |
| ATCTTGCATGGTCTCTGAAG+CGG | 0.593986 | 1.4:-78804123 | MS.gene41389:CDS |
| CCCTCACTAAACTCTTGACT+AGG | 0.596428 | 1.4:+78803939 | None:intergenic |
| GCTTACCGAGGTTTATGCTA+CGG | 0.602521 | 1.4:+78805750 | None:intergenic |
| CGCTGCTCGAAAAGTGTCAG+AGG | 0.606032 | 1.4:-78805363 | MS.gene41389:CDS |
| AATAACTGTAAAAGGGTGGT+AGG | 0.617141 | 1.4:-78804088 | MS.gene41389:CDS |
| CTGATGAAGATGTTATTCCA+CGG | 0.647888 | 1.4:+78805047 | None:intergenic |
| TTATTGACGATAGTTATCCG+TGG | 0.648146 | 1.4:-78805064 | MS.gene41389:CDS |
| TCTCGTTCATGTATAAGAGG+TGG | 0.648526 | 1.4:+78804265 | None:intergenic |
| ACCTAGTCAAGAGTTTAGTG+AGG | 0.655508 | 1.4:-78803940 | MS.gene41389:CDS |
| CAAGAGTTTAGTGAGGGACA+CGG | 0.657364 | 1.4:-78803933 | MS.gene41389:CDS |
| CCTAGTCAAGAGTTTAGTGA+GGG | 0.661710 | 1.4:-78803939 | MS.gene41389:CDS |
| ATGCACTGTTAGCTGATACA+GGG | 0.664898 | 1.4:-78804030 | MS.gene41389:CDS |
| CATATATTACACCATTCATG+TGG | 0.675235 | 1.4:+78804050 | None:intergenic |
| TGTGAATAACTGTAAAAGGG+TGG | 0.676596 | 1.4:-78804092 | MS.gene41389:CDS |
| TTACCTCATCTCCAAAAGGG+CGG | 0.697162 | 1.4:+78805466 | None:intergenic |
| ATTGGCCGTAGCATAAACCT+CGG | 0.708741 | 1.4:-78805755 | MS.gene41389:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATACTATTGTTTACT+TGG | + | chr1.4:78805658-78805677 | None:intergenic | 15.0% |
| !! | ATTTAATCTAAATCAAGATA+AGG | - | chr1.4:78804158-78804177 | MS.gene41389:intron | 15.0% |
| !! | TTATCTTGATTTAGATTAAA+TGG | + | chr1.4:78804159-78804178 | None:intergenic | 15.0% |
| !! | TTTAATCTAAATCAAGATAA+GGG | - | chr1.4:78804159-78804178 | MS.gene41389:intron | 15.0% |
| !!! | ACAAAATATCATTTTAAAAG+GGG | + | chr1.4:78804895-78804914 | None:intergenic | 15.0% |
| !!! | GACAAAATATCATTTTAAAA+GGG | + | chr1.4:78804896-78804915 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTGAACAAAG+TGG | - | chr1.4:78805011-78805030 | MS.gene41389:intron | 15.0% |
| !! | ACCATTTATGAATTCATATA+AGG | + | chr1.4:78805929-78805948 | None:intergenic | 20.0% |
| !! | TTATATGAATTCATAAATGG+TGG | - | chr1.4:78805928-78805947 | MS.gene41389:CDS | 20.0% |
| !!! | ACATATTTATCTTTTTTCTC+AGG | - | chr1.4:78804101-78804120 | MS.gene41389:CDS | 20.0% |
| !!! | ATATTTATCTTTTTTCTCAG+GGG | - | chr1.4:78804103-78804122 | MS.gene41389:CDS | 20.0% |
| !!! | CATATTTATCTTTTTTCTCA+GGG | - | chr1.4:78804102-78804121 | MS.gene41389:CDS | 20.0% |
| !!! | GGACAAAATATCATTTTAAA+AGG | + | chr1.4:78804897-78804916 | None:intergenic | 20.0% |
| ! | AAAACTTATTTCAATACCCT+TGG | + | chr1.4:78805242-78805261 | None:intergenic | 25.0% |
| ! | AACATTTCACTATAACTGAA+TGG | + | chr1.4:78805278-78805297 | None:intergenic | 25.0% |
| ! | ATATATAAAACTCTCAACCA+GGG | - | chr1.4:78805356-78805375 | MS.gene41389:CDS | 25.0% |
| ! | GCCTTATATGAATTCATAAA+TGG | - | chr1.4:78805925-78805944 | MS.gene41389:CDS | 25.0% |
| ! | TATATATAAAACTCTCAACC+AGG | - | chr1.4:78805355-78805374 | MS.gene41389:CDS | 25.0% |
| ! | TATTCCATAGTGTTCTTTAA+AGG | - | chr1.4:78804531-78804550 | MS.gene41389:intron | 25.0% |
| ! | TGTGTAAGATGCATAATTAA+AGG | - | chr1.4:78805308-78805327 | MS.gene41389:intron | 25.0% |
| ! | TTCCGAGTACTTTATTAATT+GGG | - | chr1.4:78805196-78805215 | MS.gene41389:intron | 25.0% |
| ! | TTTAACCTAAACACAAAACA+CGG | + | chr1.4:78804973-78804992 | None:intergenic | 25.0% |
| ! | TTTCCGAGTACTTTATTAAT+TGG | - | chr1.4:78805195-78805214 | MS.gene41389:intron | 25.0% |
| !! | AATTAATAAAGTACTCGGAA+AGG | + | chr1.4:78805196-78805215 | None:intergenic | 25.0% |
| !! | ATTAATAAAGTACTCGGAAA+GGG | + | chr1.4:78805195-78805214 | None:intergenic | 25.0% |
| !! | ATTTCCTTTAAAGAACACTA+TGG | + | chr1.4:78804538-78804557 | None:intergenic | 25.0% |
| !! | TGTTTTATGATCGAAATATC+AGG | - | chr1.4:78804257-78804276 | MS.gene41389:intron | 25.0% |
| !!! | GTACATACTGTTATTTCAAT+TGG | + | chr1.4:78804510-78804529 | None:intergenic | 25.0% |
| !!! | TTTATTTTGTACCCATGAAT+TGG | - | chr1.4:78804191-78804210 | MS.gene41389:intron | 25.0% |
| ACATCTCAAAACCAATTCAT+GGG | + | chr1.4:78804205-78804224 | None:intergenic | 30.0% | |
| ATCAGCTTGACAAACAATTA+AGG | - | chr1.4:78803995-78804014 | MS.gene41389:CDS | 30.0% | |
| CATATATTACACCATTCATG+TGG | + | chr1.4:78805768-78805787 | None:intergenic | 30.0% | |
| CATTTCTACAAATAAGCTTG+AGG | - | chr1.4:78804792-78804811 | MS.gene41389:intron | 30.0% | |
| CTGGGAAAAATTCAAATGAT+GGG | - | chr1.4:78805830-78805849 | MS.gene41389:CDS | 30.0% | |
| GTAATTGAGATTGACATTCT+AGG | + | chr1.4:78804830-78804849 | None:intergenic | 30.0% | |
| TCTGTATGATCTTAGGATAA+TGG | - | chr1.4:78804660-78804679 | MS.gene41389:intron | 30.0% | |
| TGGGAAAAATTCAAATGATG+GGG | - | chr1.4:78805831-78805850 | MS.gene41389:CDS | 30.0% | |
| TTTATGATCGAAATATCAGG+TGG | - | chr1.4:78804260-78804279 | MS.gene41389:intron | 30.0% | |
| ! | ATGTACGGAATTTGAAACAA+TGG | - | chr1.4:78804588-78804607 | MS.gene41389:intron | 30.0% |
| ! | CTGCTTCAGATTTTTATGTA+CGG | - | chr1.4:78804573-78804592 | MS.gene41389:intron | 30.0% |
| ! | GAAGTATTCTGTATGATCTT+AGG | - | chr1.4:78804653-78804672 | MS.gene41389:intron | 30.0% |
| ! | TGTACGGAATTTGAAACAAT+GGG | - | chr1.4:78804589-78804608 | MS.gene41389:intron | 30.0% |
| ! | TTCTCTGTATTTGTAGCTTT+TGG | - | chr1.4:78804381-78804400 | MS.gene41389:intron | 30.0% |
| ! | TTGTGTTTAGGTTAAATGAG+TGG | - | chr1.4:78804977-78804996 | MS.gene41389:intron | 30.0% |
| !! | TAATGTGTCTTTAAGACACT+AGG | + | chr1.4:78804132-78804151 | None:intergenic | 30.0% |
| !!! | TTTTTTGAACAAAGTGGCTT+AGG | - | chr1.4:78805017-78805036 | MS.gene41389:intron | 30.0% |
| AAAACTGAAGAGCCAAATCT+TGG | - | chr1.4:78805446-78805465 | MS.gene41389:intron | 35.0% | |
| AATAACTGTAAAAGGGTGGT+AGG | - | chr1.4:78805727-78805746 | MS.gene41389:intron | 35.0% | |
| ACTGAGTCTTCAACAATTGA+AGG | + | chr1.4:78803889-78803908 | None:intergenic | 35.0% | |
| AGCGGAAATCTTAGCTAAAT+GGG | + | chr1.4:78805084-78805103 | None:intergenic | 35.0% | |
| AGGCTGTGAATAACTGTAAA+AGG | - | chr1.4:78805719-78805738 | MS.gene41389:intron | 35.0% | |
| ATCTTAGCTAAATGGGGAAA+AGG | + | chr1.4:78805077-78805096 | None:intergenic | 35.0% | |
| ATGTATAAGAGGTGGCAATA+GGG | + | chr1.4:78805545-78805564 | None:intergenic | 35.0% | |
| CTGATGAAGATGTTATTCCA+CGG | + | chr1.4:78804771-78804790 | None:intergenic | 35.0% | |
| CTGCAACTAATACCAAGATT+TGG | + | chr1.4:78805461-78805480 | None:intergenic | 35.0% | |
| GAATTACCTCATCTCCAAAA+GGG | + | chr1.4:78804355-78804374 | None:intergenic | 35.0% | |
| GACATCTCAAAACCAATTCA+TGG | + | chr1.4:78804206-78804225 | None:intergenic | 35.0% | |
| GCTGGGAAAAATTCAAATGA+TGG | - | chr1.4:78805829-78805848 | MS.gene41389:CDS | 35.0% | |
| GGAAAGGGTTTATATGACAT+GGG | + | chr1.4:78805180-78805199 | None:intergenic | 35.0% | |
| GGCTGTGAATAACTGTAAAA+GGG | - | chr1.4:78805720-78805739 | MS.gene41389:intron | 35.0% | |
| GGGAAAAGGAATAGCATAAA+AGG | + | chr1.4:78805063-78805082 | None:intergenic | 35.0% | |
| GTATCTCGTTCATGTATAAG+AGG | + | chr1.4:78805556-78805575 | None:intergenic | 35.0% | |
| TAGATATTTATGCATCTCCC+TGG | + | chr1.4:78805376-78805395 | None:intergenic | 35.0% | |
| TGAATTACCTCATCTCCAAA+AGG | + | chr1.4:78804356-78804375 | None:intergenic | 35.0% | |
| TGTGAATAACTGTAAAAGGG+TGG | - | chr1.4:78805723-78805742 | MS.gene41389:intron | 35.0% | |
| TTAGGTTAAATGAGTGGCTT+AGG | - | chr1.4:78804983-78805002 | MS.gene41389:intron | 35.0% | |
| TTATTGACGATAGTTATCCG+TGG | - | chr1.4:78804751-78804770 | MS.gene41389:intron | 35.0% | |
| TTTCACTATAACTGAATGGC+TGG | + | chr1.4:78805274-78805293 | None:intergenic | 35.0% | |
| ! | CATTTGAATTTTTCCCAGCA+AGG | + | chr1.4:78805828-78805847 | None:intergenic | 35.0% |
| ! | GGCCCAATTAATAAAGTACT+CGG | + | chr1.4:78805201-78805220 | None:intergenic | 35.0% |
| ! | TCTACTATGTTTTCCTTGAG+CGG | - | chr1.4:78804018-78804037 | MS.gene41389:CDS | 35.0% |
| !!! | ACTGGTTTTTTTGGAGCTAT+TGG | - | chr1.4:78804042-78804061 | MS.gene41389:CDS | 35.0% |
| AACGAAAACCGTAGCTTAGT+AGG | + | chr1.4:78805117-78805136 | None:intergenic | 40.0% | |
| ACCTAGTCAAGAGTTTAGTG+AGG | - | chr1.4:78805875-78805894 | MS.gene41389:CDS | 40.0% | |
| ACGAAAACCGTAGCTTAGTA+GGG | + | chr1.4:78805116-78805135 | None:intergenic | 40.0% | |
| ATGCACTGTTAGCTGATACA+GGG | - | chr1.4:78805785-78805804 | MS.gene41389:CDS | 40.0% | |
| ATTGGAAAAGGCCACATGAA+TGG | - | chr1.4:78805754-78805773 | MS.gene41389:intron | 40.0% | |
| CAGAAAGCAAGTTCAGATGA+TGG | - | chr1.4:78805478-78805497 | MS.gene41389:CDS | 40.0% | |
| CAGATTTCATTTCCAGAGCT+GGG | - | chr1.4:78803953-78803972 | MS.gene41389:CDS | 40.0% | |
| CATGTATAAGAGGTGGCAAT+AGG | + | chr1.4:78805546-78805565 | None:intergenic | 40.0% | |
| CCTAGTCAAGAGTTTAGTGA+GGG | - | chr1.4:78805876-78805895 | MS.gene41389:CDS | 40.0% | |
| CGGAAAGGGTTTATATGACA+TGG | + | chr1.4:78805181-78805200 | None:intergenic | 40.0% | |
| GAACAAAAATGTGCTTACCG+AGG | + | chr1.4:78804080-78804099 | None:intergenic | 40.0% | |
| GAGCGGAAATCTTAGCTAAA+TGG | + | chr1.4:78805085-78805104 | None:intergenic | 40.0% | |
| GCGGAAATCTTAGCTAAATG+GGG | + | chr1.4:78805083-78805102 | None:intergenic | 40.0% | |
| GGTGATTGGCATTGTCTTAT+GGG | - | chr1.4:78805903-78805922 | MS.gene41389:CDS | 40.0% | |
| TAGGACTTGTCACATGCAAA+AGG | + | chr1.4:78805622-78805641 | None:intergenic | 40.0% | |
| TATGCACTGTTAGCTGATAC+AGG | - | chr1.4:78805784-78805803 | MS.gene41389:CDS | 40.0% | |
| TCTCGTTCATGTATAAGAGG+TGG | + | chr1.4:78805553-78805572 | None:intergenic | 40.0% | |
| TCTTTGATGAAAAAGCAGCC+AGG | + | chr1.4:78804313-78804332 | None:intergenic | 40.0% | |
| TTGTTCTGCAGTATCTTGCA+TGG | - | chr1.4:78805680-78805699 | MS.gene41389:intron | 40.0% | |
| ! | AAGGTCCGTGTTTTGTGTTT+AGG | - | chr1.4:78804965-78804984 | MS.gene41389:intron | 40.0% |
| ! | ACTAAGCTACGGTTTTCGTT+GGG | - | chr1.4:78805117-78805136 | MS.gene41389:intron | 40.0% |
| ! | CTACTATGTTTTCCTTGAGC+GGG | - | chr1.4:78804019-78804038 | MS.gene41389:CDS | 40.0% |
| ! | TACTAAGCTACGGTTTTCGT+TGG | - | chr1.4:78805116-78805135 | MS.gene41389:intron | 40.0% |
| ! | TCAAATATTGACCGCCCTTT+TGG | - | chr1.4:78804338-78804357 | MS.gene41389:CDS | 40.0% |
| ! | TCAAATGATGGGGCTTCTAT+TGG | - | chr1.4:78805841-78805860 | MS.gene41389:CDS | 40.0% |
| ! | TTTGGCATTGAGATTACTCC+TGG | - | chr1.4:78804292-78804311 | MS.gene41389:CDS | 40.0% |
| ! | TTTTGTAGCTTCAGAGAGCA+TGG | - | chr1.4:78804698-78804717 | MS.gene41389:intron | 40.0% |
| !!! | CACAACTAGTTTTGGGAGAT+AGG | - | chr1.4:78804484-78804503 | MS.gene41389:intron | 40.0% |
| !!! | CGATGCAATTTTTGAGTGAG+AGG | + | chr1.4:78805593-78805612 | None:intergenic | 40.0% |
| AAAAAAACCAGTCCCGCTCA+AGG | + | chr1.4:78804034-78804053 | None:intergenic | 45.0% | |
| AAAAGGGTGGTAGGTGTGAT+TGG | - | chr1.4:78805736-78805755 | MS.gene41389:intron | 45.0% | |
| AGCTAAGATTTCCGCTCTCT+GGG | - | chr1.4:78805088-78805107 | MS.gene41389:CDS | 45.0% | |
| AGTAAACAGTTCGCAGACCA+AGG | - | chr1.4:78805222-78805241 | MS.gene41389:intron | 45.0% | |
| AGTAGAATCCGAATAGGCAC+AGG | + | chr1.4:78805154-78805173 | None:intergenic | 45.0% | |
| ATAAGAGGTGGCAATAGGGA+TGG | + | chr1.4:78805541-78805560 | None:intergenic | 45.0% | |
| ATCAGGTGGTCAAACTGCTT+TGG | - | chr1.4:78804274-78804293 | MS.gene41389:CDS | 45.0% | |
| ATTGGCCGTAGCATAAACCT+CGG | - | chr1.4:78804060-78804079 | MS.gene41389:CDS | 45.0% | |
| CAAAACACGGACCTTGAACA+TGG | + | chr1.4:78804960-78804979 | None:intergenic | 45.0% | |
| CAAGAGTTTAGTGAGGGACA+CGG | - | chr1.4:78805882-78805901 | MS.gene41389:CDS | 45.0% | |
| CCCTCACTAAACTCTTGACT+AGG | + | chr1.4:78805879-78805898 | None:intergenic | 45.0% | |
| CGGTGATTGGCATTGTCTTA+TGG | - | chr1.4:78805902-78805921 | MS.gene41389:CDS | 45.0% | |
| GATATCCTAGACGCTCTACT+CGG | + | chr1.4:78804924-78804943 | None:intergenic | 45.0% | |
| GCAGATTTCATTTCCAGAGC+TGG | - | chr1.4:78803952-78803971 | MS.gene41389:CDS | 45.0% | |
| GCTTACCGAGGTTTATGCTA+CGG | + | chr1.4:78804068-78804087 | None:intergenic | 45.0% | |
| GTAAACAGTTCGCAGACCAA+GGG | - | chr1.4:78805223-78805242 | MS.gene41389:intron | 45.0% | |
| GTGCCTATTCGGATTCTACT+CGG | - | chr1.4:78805154-78805173 | MS.gene41389:intron | 45.0% | |
| GTGGTAGGTGTGATTGGAAA+AGG | - | chr1.4:78805742-78805761 | MS.gene41389:intron | 45.0% | |
| TAGCTAAGATTTCCGCTCTC+TGG | - | chr1.4:78805087-78805106 | MS.gene41389:CDS | 45.0% | |
| TGAGATTTCGAGACCTTGCT+GGG | - | chr1.4:78805812-78805831 | MS.gene41389:CDS | 45.0% | |
| TGCATGTGACAAGTCCTACA+AGG | - | chr1.4:78805624-78805643 | MS.gene41389:intron | 45.0% | |
| TGGTCTGCGAACTGTTTACT+CGG | + | chr1.4:78805222-78805241 | None:intergenic | 45.0% | |
| TTACCTCATCTCCAAAAGGG+CGG | + | chr1.4:78804352-78804371 | None:intergenic | 45.0% | |
| TTGAGATTTCGAGACCTTGC+TGG | - | chr1.4:78805811-78805830 | MS.gene41389:CDS | 45.0% | |
| ! | AGAGCGTCTAGGATATCTAC+CGG | - | chr1.4:78804927-78804946 | MS.gene41389:intron | 45.0% |
| ! | ATCTTGCATGGTCTCTGAAG+CGG | - | chr1.4:78805692-78805711 | MS.gene41389:intron | 45.0% |
| !! | ACTTGGAGTTGTAGCCTTGT+AGG | + | chr1.4:78805641-78805660 | None:intergenic | 45.0% |
| !! | AGTTGGCGCACAACTAGTTT+TGG | - | chr1.4:78804476-78804495 | MS.gene41389:intron | 45.0% |
| !! | CGAAAAGTGTCAGAGGAAGT+TGG | - | chr1.4:78804459-78804478 | MS.gene41389:intron | 45.0% |
| !! | GAGCATGGAAGGCTTTGAAT+TGG | - | chr1.4:78804713-78804732 | MS.gene41389:intron | 45.0% |
| !!! | GTTGGCGCACAACTAGTTTT+GGG | - | chr1.4:78804477-78804496 | MS.gene41389:intron | 45.0% |
| !!! | TTGAGCGGGACTGGTTTTTT+TGG | - | chr1.4:78804033-78804052 | MS.gene41389:CDS | 45.0% |
| AGCATACATGATCCCAGCTC+TGG | + | chr1.4:78803968-78803987 | None:intergenic | 50.0% | |
| CCTTGGAACCTGTGCCTATT+CGG | - | chr1.4:78805143-78805162 | MS.gene41389:intron | 50.0% | |
| TTAGTGAGGGACACGGTGAT+TGG | - | chr1.4:78805889-78805908 | MS.gene41389:CDS | 50.0% | |
| ! | ATGATGGGGCTTCTATTGGC+TGG | - | chr1.4:78805845-78805864 | MS.gene41389:CDS | 50.0% |
| ! | ATGTTTTCCTTGAGCGGGAC+TGG | - | chr1.4:78804024-78804043 | MS.gene41389:CDS | 50.0% |
| ! | CGGTTTTCGTTGGGAATCCT+TGG | - | chr1.4:78805126-78805145 | MS.gene41389:intron | 50.0% |
| ! | GTAGCTTCAGAGAGCATGGA+AGG | - | chr1.4:78804702-78804721 | MS.gene41389:intron | 50.0% |
| CCGAATAGGCACAGGTTCCA+AGG | + | chr1.4:78805146-78805165 | None:intergenic | 55.0% | |
| CCTTGAACATGGCACACTGC+CGG | + | chr1.4:78804949-78804968 | None:intergenic | 55.0% | |
| CTAGACGCTCTACTCGGAAC+AGG | + | chr1.4:78804918-78804937 | None:intergenic | 55.0% | |
| CTGGGCACCCTACTAAGCTA+CGG | - | chr1.4:78805106-78805125 | MS.gene41389:CDS | 55.0% | |
| GGGCCGAGTAGAATCCGAAT+AGG | + | chr1.4:78805160-78805179 | None:intergenic | 55.0% | |
| ! | CTGTTCCGAGTAGAGCGTCT+AGG | - | chr1.4:78804916-78804935 | MS.gene41389:intron | 55.0% |
| ! | TTAGTAGGGTGCCCAGAGAG+CGG | + | chr1.4:78805102-78805121 | None:intergenic | 55.0% |
| !! | ATGGTCTCTGAAGCGGAGCA+AGG | - | chr1.4:78805699-78805718 | MS.gene41389:intron | 55.0% |
| !! | CGCTGCTCGAAAAGTGTCAG+AGG | - | chr1.4:78804452-78804471 | MS.gene41389:intron | 55.0% |
| !! | CTGACACTTTTCGAGCAGCG+CGG | + | chr1.4:78804452-78804471 | None:intergenic | 55.0% |
| !! | TGACCGCCCTTTTGGAGATG+AGG | - | chr1.4:78804346-78804365 | MS.gene41389:intron | 55.0% |
| CCGGCAGTGTGCCATGTTCA+AGG | - | chr1.4:78804946-78804965 | MS.gene41389:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 78803871 | 78805966 | 78803871 | ID=MS.gene41389 |
| chr1.4 | mRNA | 78803871 | 78805966 | 78803871 | ID=MS.gene41389.t1;Parent=MS.gene41389 |
| chr1.4 | exon | 78805756 | 78805966 | 78805756 | ID=MS.gene41389.t1.exon1;Parent=MS.gene41389.t1 |
| chr1.4 | CDS | 78805756 | 78805966 | 78805756 | ID=cds.MS.gene41389.t1;Parent=MS.gene41389.t1 |
| chr1.4 | exon | 78805470 | 78805558 | 78805470 | ID=MS.gene41389.t1.exon2;Parent=MS.gene41389.t1 |
| chr1.4 | CDS | 78805470 | 78805558 | 78805470 | ID=cds.MS.gene41389.t1;Parent=MS.gene41389.t1 |
| chr1.4 | exon | 78805316 | 78805390 | 78805316 | ID=MS.gene41389.t1.exon3;Parent=MS.gene41389.t1 |
| chr1.4 | CDS | 78805316 | 78805390 | 78805316 | ID=cds.MS.gene41389.t1;Parent=MS.gene41389.t1 |
| chr1.4 | exon | 78805024 | 78805131 | 78805024 | ID=MS.gene41389.t1.exon4;Parent=MS.gene41389.t1 |
| chr1.4 | CDS | 78805024 | 78805131 | 78805024 | ID=cds.MS.gene41389.t1;Parent=MS.gene41389.t1 |
| chr1.4 | exon | 78804261 | 78804362 | 78804261 | ID=MS.gene41389.t1.exon5;Parent=MS.gene41389.t1 |
| chr1.4 | CDS | 78804261 | 78804362 | 78804261 | ID=cds.MS.gene41389.t1;Parent=MS.gene41389.t1 |
| chr1.4 | exon | 78803871 | 78804146 | 78803871 | ID=MS.gene41389.t1.exon6;Parent=MS.gene41389.t1 |
| chr1.4 | CDS | 78803871 | 78804146 | 78803871 | ID=cds.MS.gene41389.t1;Parent=MS.gene41389.t1 |
| Gene Sequence |
| Protein sequence |
