AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene43061

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene43061.t1 MTR_2g086020 61.875 320 51 6 53 301 1 320 4.89e-111 324
MS.gene43061.t1 MTR_8g070950 71.892 185 43 1 117 301 264 439 6.24e-89 272
MS.gene43061.t1 MTR_8g070950 61.905 84 26 1 27 104 15 98 1.11e-21 94.7
MS.gene43061.t1 MTR_8g062300 66.500 200 40 2 117 300 293 481 1.08e-82 257
MS.gene43061.t1 MTR_8g062300 61.818 110 39 2 1 108 1 109 2.27e-32 125
MS.gene43061.t1 MTR_8g469020 63.934 183 54 1 119 301 286 456 1.31e-79 249
MS.gene43061.t1 MTR_8g469020 57.647 85 30 2 26 104 6 90 8.47e-20 89.4
MS.gene43061.t1 MTR_8g062010 68.649 185 47 2 116 300 261 434 1.49e-79 248
MS.gene43061.t1 MTR_8g062010 65.169 89 24 2 27 108 9 97 1.23e-27 111
MS.gene43061.t1 MTR_8g062310 63.243 185 57 1 117 301 260 433 2.96e-75 237
MS.gene43061.t1 MTR_8g062310 56.989 93 38 1 20 112 20 110 1.37e-25 105
MS.gene43061.t1 MTR_8g062080 59.512 205 73 2 99 300 252 449 3.26e-71 227
MS.gene43061.t1 MTR_8g062080 60.377 106 39 1 20 122 16 121 4.51e-32 124
MS.gene43061.t1 MTR_8g058965 69.128 149 46 0 152 300 312 460 2.57e-69 222
MS.gene43061.t1 MTR_8g058965 57.732 97 32 2 14 104 3 96 2.30e-22 97.1
MS.gene43061.t1 MTR_4g050250 59.690 129 39 3 117 243 304 421 5.13e-42 150
MS.gene43061.t1 MTR_4g050250 52.174 115 37 4 1 104 1 108 1.04e-22 97.4
MS.gene43061.t1 MTR_8g014260 40.948 232 106 6 66 296 250 451 4.00e-39 143
MS.gene43061.t1 MTR_8g467790 68.889 90 28 0 153 242 406 495 1.78e-36 136
MS.gene43061.t1 MTR_8g467790 55.056 89 30 2 26 104 147 235 6.00e-20 90.1
MS.gene43061.t1 MTR_4g024710 42.935 184 90 5 114 296 178 347 8.32e-34 126
MS.gene43061.t1 MTR_3g099800 68.966 87 26 1 208 293 19 105 5.32e-33 117
MS.gene43061.t1 MTR_8g077460 48.611 144 70 4 154 296 235 375 8.82e-33 124
MS.gene43061.t1 MTR_8g014210 48.611 144 70 4 154 296 91 231 3.85e-32 119
MS.gene43061.t1 MTR_2g083840 44.022 184 87 4 117 296 286 457 2.64e-31 122
MS.gene43061.t1 MTR_2g083840 53.488 86 34 1 25 104 19 104 1.83e-20 91.3
MS.gene43061.t1 MTR_5g092960 36.574 216 117 6 85 295 261 461 4.06e-29 115
MS.gene43061.t1 MTR_5g092960 39.535 129 66 3 24 142 16 142 2.26e-15 76.6
MS.gene43061.t1 MTR_8g467800 37.696 191 98 4 118 301 282 458 1.26e-28 114
MS.gene43061.t1 MTR_8g467800 53.659 82 34 2 27 105 20 100 2.20e-15 76.6
MS.gene43061.t1 MTR_8g062270 39.572 187 88 6 117 295 284 453 1.36e-28 114
MS.gene43061.t1 MTR_8g062270 48.387 93 35 3 24 104 13 104 3.98e-16 78.6
MS.gene43061.t1 MTR_8g468810 54.955 111 41 3 1 104 1 109 1.17e-27 109
MS.gene43061.t1 MTR_8g468810 54.955 111 41 3 1 104 1 109 1.33e-27 109
MS.gene43061.t1 MTR_8g468810 54.955 111 41 3 1 104 1 109 2.26e-27 109
MS.gene43061.t1 MTR_8g468810 54.955 111 41 3 1 104 1 109 3.74e-27 109
MS.gene43061.t1 MTR_8g468810 37.436 195 105 6 109 296 279 463 3.98e-27 110
MS.gene43061.t1 MTR_8g468810 54.955 111 41 3 1 104 1 109 1.47e-26 108
MS.gene43061.t1 MTR_8g468840 38.462 182 94 5 117 294 281 448 4.19e-24 101
MS.gene43061.t1 MTR_8g468840 55.172 87 29 3 27 104 14 99 7.22e-17 80.9
MS.gene43061.t1 MTR_8g058970 38.191 199 99 8 108 296 293 477 8.83e-24 100
MS.gene43061.t1 MTR_8g058970 55.814 86 31 1 26 104 18 103 1.06e-21 95.1
MS.gene43061.t1 MTR_4g032730 34.884 172 87 2 147 295 297 466 6.20e-23 98.6
MS.gene43061.t1 MTR_4g032730 51.000 100 39 2 15 104 3 102 2.81e-21 94.0
MS.gene43061.t1 MTR_4g024745 41.401 157 77 6 119 274 137 279 2.29e-20 89.0
MS.gene43061.t1 MTR_8g014160 52.632 95 39 3 204 296 335 425 1.06e-19 89.0
MS.gene43061.t1 MTR_8g468760 41.304 138 72 4 165 295 283 418 2.22e-19 88.2
MS.gene43061.t1 MTR_8g468760 51.923 104 30 4 13 104 2 97 1.30e-18 85.9
MS.gene43061.t1 MTR_8g445780 41.880 117 65 3 134 249 276 390 7.60e-16 77.4
MS.gene43061.t1 MTR_8g467800 53.659 82 34 2 27 105 20 100 1.20e-15 76.6
MS.gene43061.t1 MTR_8g014230 47.059 85 43 2 206 290 17 99 1.51e-15 71.6
MS.gene43061.t1 MTR_5g092960 42.991 107 50 2 7 104 1 105 1.73e-15 76.6
MS.gene43061.t1 MTR_5g084070 34.074 135 83 3 162 291 293 426 2.29e-12 67.4
MS.gene43061.t1 MTR_8g014290 46.739 92 34 4 27 104 10 100 6.54e-12 63.2
MS.gene43061.t1 MTR_5g021550 45.652 92 41 4 21 104 13 103 7.66e-12 62.8
MS.gene43061.t1 MTR_1g041245 35.374 147 79 5 162 296 244 386 1.12e-11 65.1
MS.gene43061.t1 MTR_3g107100 42.857 84 46 2 27 109 11 93 2.29e-11 64.3
MS.gene43061.t1 MTR_5g082930 37.143 105 56 3 29 124 17 120 8.29e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 59 sgRNAs with CRISPR-Local

Find 89 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATATTTCAATGGACAAAA+AGG 0.261020 2.4:-14102399 MS.gene43061:CDS
TGATGTAAATCGCGAAATTC+AGG 0.303964 2.4:+14102811 None:intergenic
TCATCTCTGGAAGGATCTTC+AGG 0.350215 2.4:-14103360 MS.gene43061:CDS
TCTTCTTCTTCTTCATCATT+CGG 0.363788 2.4:+14103515 None:intergenic
GACCCAGCTGTATCTCCTTA+AGG 0.386242 2.4:-14102308 None:intergenic
CTCGGATGAGGTTGAGAATA+GGG 0.388430 2.4:+14103035 None:intergenic
TCGGAAGGAAGGACATGATA+TGG 0.406557 2.4:+14103429 None:intergenic
CTCCCAGGTATCTTCATCTC+TGG 0.418540 2.4:-14103373 MS.gene43061:CDS
CCGCTCAATTCCGTTTGAAA+AGG 0.420814 2.4:-14103318 MS.gene43061:CDS
TCATAGACAACTCCTAGTTA+AGG 0.440699 2.4:-14102996 MS.gene43061:CDS
AATTCAGGATAATCTAGAAC+AGG 0.442763 2.4:+14102826 None:intergenic
TTTGAATGTCACGGGATTTG+CGG 0.456464 2.4:+14103264 None:intergenic
GAAATTCACTGTTGTCATCT+CGG 0.468678 2.4:+14103017 None:intergenic
CTTCCAGAGATGAAGATACC+TGG 0.483060 2.4:+14103370 None:intergenic
TCTCGGATGAGGTTGAGAAT+AGG 0.495111 2.4:+14103034 None:intergenic
TCACCTTAAGGAGATACAGC+TGG 0.497609 2.4:+14102305 None:intergenic
CACTGTTGTCATCTCGGATG+AGG 0.499044 2.4:+14103023 None:intergenic
TCCGGCTGCCATGTTCTCAA+TGG 0.513864 2.4:+14102563 None:intergenic
GTGTCACCAATGGCGTCGAC+AGG 0.521896 2.4:-14103481 MS.gene43061:CDS
ACTCAACCTGTCGACGCCAT+TGG 0.522831 2.4:+14103475 None:intergenic
ATAATCTAGAACAGGGGCAT+GGG 0.525230 2.4:+14102834 None:intergenic
ATATGGCATAGCAGTGAGTC+CGG 0.530213 2.4:+14103446 None:intergenic
TTCACGTCATTTGACTTCGA+AGG 0.536654 2.4:-14102954 MS.gene43061:intron
TTGAAACTTCTTAATATCGA+CGG 0.536726 2.4:+14103205 None:intergenic
GAAGAAGAAGAATGGGAAGG+AGG 0.542040 2.4:-14103503 MS.gene43061:CDS
CGATGAGTCTCGTCTCTCCC+AGG 0.545777 2.4:-14103388 MS.gene43061:CDS
TGAGAAACCGTTGTTGACTC+CGG 0.547439 2.4:+14102545 None:intergenic
TCTTCTTCTTCATCATTCGG+TGG 0.551632 2.4:+14103518 None:intergenic
TGTGGCATTGCTCAAGAACA+TGG 0.554101 2.4:+14102746 None:intergenic
CACCTTAAGGAGATACAGCT+GGG 0.554581 2.4:+14102306 None:intergenic
GGAAGTTCTCGTCGGAAGGA+AGG 0.554715 2.4:+14103418 None:intergenic
AACCACCACCATTGAGAACA+TGG 0.560977 2.4:-14102571 MS.gene43061:CDS
ATACATCATCTTCCTTAACT+AGG 0.562699 2.4:+14102984 None:intergenic
ACCATTGAGAACATGGCAGC+CGG 0.564288 2.4:-14102564 MS.gene43061:CDS
GATAATCTAGAACAGGGGCA+TGG 0.567059 2.4:+14102833 None:intergenic
GAATGTCACGGGATTTGCGG+AGG 0.571006 2.4:+14103267 None:intergenic
GAATCGACAGACGATGGCGG+AGG 0.577423 2.4:-14103555 None:intergenic
GGCTGCCATGTTCTCAATGG+TGG 0.577603 2.4:+14102566 None:intergenic
GATCAAATGTGAGAATGAGA+TGG 0.577899 2.4:+14103237 None:intergenic
AAAGATTAACTGACATACCA+AGG 0.578998 2.4:-14102358 MS.gene43061:CDS
TGCCATGTTCTCAATGGTGG+TGG 0.582149 2.4:+14102569 None:intergenic
TTCCAGAGATGAAGATACCT+GGG 0.587843 2.4:+14103371 None:intergenic
CGACGGAAGTTCTCGTCGGA+AGG 0.593778 2.4:+14103414 None:intergenic
AGCAGATTTGAGTTAAAACA+TGG 0.594987 2.4:+14102772 None:intergenic
TCTAGAACAGGGGCATGGGT+TGG 0.595830 2.4:+14102838 None:intergenic
CGACAGGTTGAGTAATCTAC+CGG 0.599670 2.4:-14103465 MS.gene43061:CDS
TGGGAAGGAGGTGTCACCAA+TGG 0.602798 2.4:-14103491 MS.gene43061:CDS
CAGGTATCTTCATCTCTGGA+AGG 0.611083 2.4:-14103369 MS.gene43061:CDS
AAGATTAACTGACATACCAA+GGG 0.614504 2.4:-14102357 MS.gene43061:CDS
GACGAGACTCATCGTTGCGA+CGG 0.616657 2.4:+14103397 None:intergenic
AATGTCACGGGATTTGCGGA+GGG 0.620855 2.4:+14103268 None:intergenic
ATTCAGGATAATCTAGAACA+GGG 0.629652 2.4:+14102827 None:intergenic
TCTCATAATTCAGAGCAACA+AGG 0.643040 2.4:-14102713 MS.gene43061:intron
TTCAGGATAATCTAGAACAG+GGG 0.644079 2.4:+14102828 None:intergenic
TGACACATGATAGAGCCCCT+TGG 0.661800 2.4:+14102341 None:intergenic
GTTGCGACGGAAGTTCTCGT+CGG 0.682930 2.4:+14103410 None:intergenic
TTATGAGAACTTGAAGCATG+TGG 0.695487 2.4:+14102728 None:intergenic
ATGGCAGCCGGAGTCAACAA+CGG 0.700697 2.4:-14102552 MS.gene43061:CDS
AGATTAACTGACATACCAAG+GGG 0.723953 2.4:-14102356 MS.gene43061:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTTGTTGATATTTCAA+TGG - chr2.4:14103444-14103463 MS.gene43061:CDS 15.0%
!! ACATACTTTGATATAAATGA+TGG - chr2.4:14102704-14102723 MS.gene43061:intron 20.0%
!! AGTTTAATTCTAACAATCTT+TGG - chr2.4:14103177-14103196 MS.gene43061:intron 20.0%
!!! AAGGTGAATTTTTACTTTTA+TGG - chr2.4:14102917-14102936 MS.gene43061:intron 20.0%
!!! TGACATATATTCTTTTAGAA+GGG - chr2.4:14103347-14103366 MS.gene43061:CDS 20.0%
!!! TTGACATATATTCTTTTAGA+AGG - chr2.4:14103346-14103365 MS.gene43061:CDS 20.0%
!!! TTGTTTTTATATGTGTAGTT+TGG - chr2.4:14102945-14102964 MS.gene43061:intron 20.0%
! TGATATTTCAATGGACAAAA+AGG - chr2.4:14103453-14103472 MS.gene43061:CDS 25.0%
! TTGAAACTTCTTAATATCGA+CGG + chr2.4:14102650-14102669 None:intergenic 25.0%
!! AATAATGAAGCCTTTTCAAA+CGG + chr2.4:14102547-14102566 None:intergenic 25.0%
!!! AAATGATGGATTATTCAAAC+TGG - chr2.4:14102718-14102737 MS.gene43061:CDS 25.0%
!!! AATGATGGATTATTCAAACT+GGG - chr2.4:14102719-14102738 MS.gene43061:CDS 25.0%
!!! CATTTGCTGAATATATTTTG+CGG - chr2.4:14103395-14103414 MS.gene43061:CDS 25.0%
AAAGATTAACTGACATACCA+AGG - chr2.4:14103494-14103513 MS.gene43061:CDS 30.0%
AAGATTAACTGACATACCAA+GGG - chr2.4:14103495-14103514 MS.gene43061:CDS 30.0%
ATACATCATCTTCCTTAACT+AGG + chr2.4:14102871-14102890 None:intergenic 30.0%
ATGATGAAGAAGAAGAAGAA+TGG - chr2.4:14102341-14102360 MS.gene43061:CDS 30.0%
GACAAATTCACTTTCAGTAA+GGG + chr2.4:14102795-14102814 None:intergenic 30.0%
TCTTCTTCTTCTTCATCATT+CGG + chr2.4:14102340-14102359 None:intergenic 30.0%
TGATGAAGAAGAAGAAGAAT+GGG - chr2.4:14102342-14102361 MS.gene43061:CDS 30.0%
TGGAAACTTTCATAGTATAC+TGG - chr2.4:14102748-14102767 MS.gene43061:CDS 30.0%
! AATTCAGGATAATCTAGAAC+AGG + chr2.4:14103029-14103048 None:intergenic 30.0%
! AGCAGATTTGAGTTAAAACA+TGG + chr2.4:14103083-14103102 None:intergenic 30.0%
! ATTCAGGATAATCTAGAACA+GGG + chr2.4:14103028-14103047 None:intergenic 30.0%
!!! ATGTTTTAACTCAAATCTGC+TGG - chr2.4:14103082-14103101 MS.gene43061:intron 30.0%
!!! ATTCTTTTAGAAGGGTATCA+AGG - chr2.4:14103355-14103374 MS.gene43061:CDS 30.0%
AGATTAACTGACATACCAAG+GGG - chr2.4:14103496-14103515 MS.gene43061:CDS 35.0%
CGACAAATTCACTTTCAGTA+AGG + chr2.4:14102796-14102815 None:intergenic 35.0%
GAAATTCACTGTTGTCATCT+CGG + chr2.4:14102838-14102857 None:intergenic 35.0%
GATCAAATGTGAGAATGAGA+TGG + chr2.4:14102618-14102637 None:intergenic 35.0%
TCATAGACAACTCCTAGTTA+AGG - chr2.4:14102856-14102875 MS.gene43061:intron 35.0%
TCTCATAATTCAGAGCAACA+AGG - chr2.4:14103139-14103158 MS.gene43061:intron 35.0%
TGATGTAAATCGCGAAATTC+AGG + chr2.4:14103044-14103063 None:intergenic 35.0%
TTATGAGAACTTGAAGCATG+TGG + chr2.4:14103127-14103146 None:intergenic 35.0%
TTATTCAAACTGGGAATCGT+TGG - chr2.4:14102728-14102747 MS.gene43061:CDS 35.0%
TTCAATGGACAAAAAGGACA+AGG - chr2.4:14103459-14103478 MS.gene43061:CDS 35.0%
TTCACTTTCAGTAAGGGAAA+AGG + chr2.4:14102789-14102808 None:intergenic 35.0%
! ATGGAACTTTTGAATGTCAC+GGG + chr2.4:14102599-14102618 None:intergenic 35.0%
! GATGGAACTTTTGAATGTCA+CGG + chr2.4:14102600-14102619 None:intergenic 35.0%
! GCTGAATATATTTTGCGGAA+AGG - chr2.4:14103400-14103419 MS.gene43061:CDS 35.0%
! TTCAGGATAATCTAGAACAG+GGG + chr2.4:14103027-14103046 None:intergenic 35.0%
CCAAGTGAAATTGTGATCAG+CGG + chr2.4:14102684-14102703 None:intergenic 40.0%
GAAGAAGAAGAAGAATGGGA+AGG - chr2.4:14102346-14102365 MS.gene43061:CDS 40.0%
GTTCCTCCTATCAGTAACAA+GGG + chr2.4:14103264-14103283 None:intergenic 40.0%
TCTTCTTCTTCATCATTCGG+TGG + chr2.4:14102337-14102356 None:intergenic 40.0%
TTCCAGAGATGAAGATACCT+GGG + chr2.4:14102484-14102503 None:intergenic 40.0%
TTTGAATGTCACGGGATTTG+CGG + chr2.4:14102591-14102610 None:intergenic 40.0%
! ATAATCTAGAACAGGGGCAT+GGG + chr2.4:14103021-14103040 None:intergenic 40.0%
! CCTTTTCAAACGGAATTGAG+CGG + chr2.4:14102537-14102556 None:intergenic 40.0%
! TTCACGTCATTTGACTTCGA+AGG - chr2.4:14102898-14102917 MS.gene43061:intron 40.0%
AACCACCACCATTGAGAACA+TGG - chr2.4:14103281-14103300 MS.gene43061:CDS 45.0%
ATATGGCATAGCAGTGAGTC+CGG + chr2.4:14102409-14102428 None:intergenic 45.0%
CAGGTATCTTCATCTCTGGA+AGG - chr2.4:14102483-14102502 MS.gene43061:CDS 45.0%
CCGCTCAATTCCGTTTGAAA+AGG - chr2.4:14102534-14102553 MS.gene43061:CDS 45.0%
CCGCTGATCACAATTTCACT+TGG - chr2.4:14102681-14102700 MS.gene43061:intron 45.0%
CTCGGATGAGGTTGAGAATA+GGG + chr2.4:14102820-14102839 None:intergenic 45.0%
CTGTTACCTTGTACATGCAG+TGG - chr2.4:14102991-14103010 MS.gene43061:CDS 45.0%
CTTCCAGAGATGAAGATACC+TGG + chr2.4:14102485-14102504 None:intergenic 45.0%
GAAGAAGAAGAATGGGAAGG+AGG - chr2.4:14102349-14102368 MS.gene43061:CDS 45.0%
GAGTCTCCCTTGTTACTGAT+AGG - chr2.4:14103255-14103274 MS.gene43061:CDS 45.0%
GGTTCCTCCTATCAGTAACA+AGG + chr2.4:14103265-14103284 None:intergenic 45.0%
TCGGAAGGAAGGACATGATA+TGG + chr2.4:14102426-14102445 None:intergenic 45.0%
TCTCCCTTGTTACTGATAGG+AGG - chr2.4:14103258-14103277 MS.gene43061:CDS 45.0%
TCTCGGATGAGGTTGAGAAT+AGG + chr2.4:14102821-14102840 None:intergenic 45.0%
TGTGGCATTGCTCAAGAACA+TGG + chr2.4:14103109-14103128 None:intergenic 45.0%
! CGACAGGTTGAGTAATCTAC+CGG - chr2.4:14102387-14102406 MS.gene43061:CDS 45.0%
! GATAATCTAGAACAGGGGCA+TGG + chr2.4:14103022-14103041 None:intergenic 45.0%
! TCATCTCTGGAAGGATCTTC+AGG - chr2.4:14102492-14102511 MS.gene43061:CDS 45.0%
!! TGAGAAACCGTTGTTGACTC+CGG + chr2.4:14103310-14103329 None:intergenic 45.0%
AATGTCACGGGATTTGCGGA+GGG + chr2.4:14102587-14102606 None:intergenic 50.0%
ACCATTGAGAACATGGCAGC+CGG - chr2.4:14103288-14103307 MS.gene43061:CDS 50.0%
CACTGTTGTCATCTCGGATG+AGG + chr2.4:14102832-14102851 None:intergenic 50.0%
CTCCCAGGTATCTTCATCTC+TGG - chr2.4:14102479-14102498 MS.gene43061:CDS 50.0%
TGACACATGATAGAGCCCCT+TGG + chr2.4:14103514-14103533 None:intergenic 50.0%
TGCCATGTTCTCAATGGTGG+TGG + chr2.4:14103286-14103305 None:intergenic 50.0%
ACTCAACCTGTCGACGCCAT+TGG + chr2.4:14102380-14102399 None:intergenic 55.0%
ATGGCAGCCGGAGTCAACAA+CGG - chr2.4:14103300-14103319 MS.gene43061:CDS 55.0%
GAATGTCACGGGATTTGCGG+AGG + chr2.4:14102588-14102607 None:intergenic 55.0%
GACGAGACTCATCGTTGCGA+CGG + chr2.4:14102458-14102477 None:intergenic 55.0%
GGAAGTTCTCGTCGGAAGGA+AGG + chr2.4:14102437-14102456 None:intergenic 55.0%
GGCTGCCATGTTCTCAATGG+TGG + chr2.4:14103289-14103308 None:intergenic 55.0%
GTTGCGACGGAAGTTCTCGT+CGG + chr2.4:14102445-14102464 None:intergenic 55.0%
TCCGGCTGCCATGTTCTCAA+TGG + chr2.4:14103292-14103311 None:intergenic 55.0%
! GGTTGGCCACTGCATGTACA+AGG + chr2.4:14103000-14103019 None:intergenic 55.0%
! TCTAGAACAGGGGCATGGGT+TGG + chr2.4:14103017-14103036 None:intergenic 55.0%
!! TGGGAAGGAGGTGTCACCAA+TGG - chr2.4:14102361-14102380 MS.gene43061:CDS 55.0%
CGACGGAAGTTCTCGTCGGA+AGG + chr2.4:14102441-14102460 None:intergenic 60.0%
CGATGAGTCTCGTCTCTCCC+AGG - chr2.4:14102464-14102483 MS.gene43061:CDS 60.0%
!! GTGTCACCAATGGCGTCGAC+AGG - chr2.4:14102371-14102390 MS.gene43061:CDS 60.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 14102310 14103564 14102310 ID=MS.gene43061
chr2.4 mRNA 14102310 14103564 14102310 ID=MS.gene43061.t1;Parent=MS.gene43061
chr2.4 exon 14103212 14103564 14103212 ID=MS.gene43061.t1.exon1;Parent=MS.gene43061.t1
chr2.4 CDS 14103212 14103564 14103212 ID=cds.MS.gene43061.t1;Parent=MS.gene43061.t1
chr2.4 exon 14102955 14103069 14102955 ID=MS.gene43061.t1.exon2;Parent=MS.gene43061.t1
chr2.4 CDS 14102955 14103069 14102955 ID=cds.MS.gene43061.t1;Parent=MS.gene43061.t1
chr2.4 exon 14102714 14102863 14102714 ID=MS.gene43061.t1.exon3;Parent=MS.gene43061.t1
chr2.4 CDS 14102714 14102863 14102714 ID=cds.MS.gene43061.t1;Parent=MS.gene43061.t1
chr2.4 exon 14102310 14102597 14102310 ID=MS.gene43061.t1.exon4;Parent=MS.gene43061.t1
chr2.4 CDS 14102310 14102597 14102310 ID=cds.MS.gene43061.t1;Parent=MS.gene43061.t1
Gene Sequence

>MS.gene43061

ATGGCGGAGGAGTTAATGATGAAACCACCGAATGATGAAGAAGAAGAAGAATGGGAAGGAGGTGTCACCAATGGCGTCGACAGGTTGAGTAATCTACCGGACTCACTGCTATGCCATATCATGTCCTTCCTTCCGACGAGAACTTCCGTCGCAACGATGAGTCTCGTCTCTCCCAGGTATCTTCATCTCTGGAAGGATCTTCAGGTCTTCAATTTCTACTTTCACCGCTCAATTCCGTTTGAAAAGGCTTCATTATTCGTTAACTCTGTTCTCTCCCTCCGCAAATCCCGTGACATTCAAAAGTTCCATCTCATTCTCACATTTGATCGATACAAATCCGTCGATATTAAGAAGTTTCAACAGCTTCAAATCCGCTGATCACAATTTCACTTGGACATACTTTGATATAAATGATGGATTATTCAAACTGGGAATCGTTGGAAACTTTCATAGTATACTGGAAGCATTTTTTGATGCCTTTTCCCTTACTGAAAGTGAATTTGTCGACCCTATTCTCAACCTCATCCGAGATGACAACAGTGAATTTCATAGACAACTCCTAGTTAAGGAAGATGATGTATATCTACTTTCACGTCATTTGACTTCGAAGGTGAATTTTTACTTTTATGGTTTATTTGTTTTTATATGTGTAGTTTGGCACTAATATTGCGCTATCATTTGCTGTTACCTTGTACATGCAGTGGCCAACCCATGCCCCTGTTCTAGATTATCCTGAATTTCGCGATTTACATCATTTGAAGTTAATTCTTCCATGTTTTAACTCAAATCTGCTGGTCCATGTTCTTGAGCAATGCCACATGCTTCAAGTTCTCATAATTCAGAGCAACAAGGTTTGTTTACTTCTCAAGTTTAATTCTAACAATCTTTGGTCTGTCTATATATACATGCATGTATGTCTCTATCTGTACACACAAATATATTTTTGAGTCTCCCTTGTTACTGATAGGAGGAACCACCACCATTGAGAACATGGCAGCCGGAGTCAACAACGGTTTCTCAATGTCTCAAATCTCACTTGACATATATTCTTTTAGAAGGGTATCAAGGACTTGAAGATGAGCTGACATTTGCTGAATATATTTTGCGGAAAGGACTTGTTTTGAAGACAATGCTTATTTTTGTTGATATTTCAATGGACAAAAAGGACAAGGACTGCTCTCTCAAAAGATTAACTGACATACCAAGGGGCTCTATCATGTGTCAACTTGAATTTGACCCAGCTGTATCTCCTTAA
Protein sequence

>MS.gene43061.t1

MAEELMMKPPNDEEEEEWEGGVTNGVDRLSNLPDSLLCHIMSFLPTRTSVATMSLVSPRYLHLWKDLQVFNFYFHRSIPFEKASLFVNSVLSLRKSRDIQKFHLILTFDRYKSVDIKNEFVDPILNLIRDDNSEFHRQLLVKEDDVYLLSRHLTSKWPTHAPVLDYPEFRDLHHLKLILPCFNSNLLVHVLEQCHMLQVLIIQSNKEEPPPLRTWQPESTTVSQCLKSHLTYILLEGYQGLEDELTFAEYILRKGLVLKTMLIFVDISMDKKDKDCSLKRLTDIPRGSIMCQLEFDPAVSP