Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63114.t1 | XP_003628566.2 | 79.5 | 434 | 39 | 1 | 1 | 384 | 1 | 434 | 1.30E-193 | 685.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63114.t1 | Q9FM89 | 25.4 | 437 | 247 | 16 | 6 | 380 | 3 | 422 | 3.6e-19 | 97.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63114.t1 | G7LDT4 | 79.5 | 434 | 39 | 1 | 1 | 384 | 1 | 434 | 9.3e-194 | 685.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63114.t1 | MTR_8g062010 | 79.493 | 434 | 39 | 1 | 1 | 384 | 1 | 434 | 0.0 | 664 |
MS.gene63114.t1 | MTR_8g070950 | 53.653 | 438 | 139 | 11 | 3 | 384 | 9 | 438 | 2.77e-134 | 391 |
MS.gene63114.t1 | MTR_8g062080 | 49.330 | 448 | 150 | 10 | 1 | 384 | 15 | 449 | 3.30e-124 | 366 |
MS.gene63114.t1 | MTR_8g062310 | 49.528 | 424 | 142 | 8 | 9 | 380 | 25 | 428 | 1.35e-120 | 356 |
MS.gene63114.t1 | MTR_8g058965 | 47.712 | 459 | 146 | 14 | 9 | 384 | 13 | 460 | 6.49e-120 | 355 |
MS.gene63114.t1 | MTR_8g469020 | 46.053 | 456 | 159 | 11 | 9 | 384 | 7 | 455 | 2.66e-115 | 343 |
MS.gene63114.t1 | MTR_4g050250 | 41.748 | 412 | 148 | 9 | 2 | 326 | 14 | 420 | 4.03e-83 | 260 |
MS.gene63114.t1 | MTR_8g467790 | 46.176 | 353 | 146 | 13 | 9 | 324 | 148 | 493 | 4.48e-80 | 254 |
MS.gene63114.t1 | MTR_2g083840 | 36.923 | 455 | 202 | 13 | 3 | 380 | 11 | 457 | 8.15e-74 | 237 |
MS.gene63114.t1 | MTR_8g062300 | 48.026 | 304 | 128 | 9 | 9 | 290 | 26 | 321 | 9.84e-69 | 224 |
MS.gene63114.t1 | MTR_8g062300 | 72.917 | 96 | 26 | 0 | 289 | 384 | 386 | 481 | 2.11e-39 | 146 |
MS.gene63114.t1 | MTR_8g058970 | 35.269 | 465 | 202 | 15 | 9 | 380 | 19 | 477 | 2.69e-61 | 205 |
MS.gene63114.t1 | MTR_8g014160 | 37.688 | 398 | 217 | 15 | 5 | 380 | 37 | 425 | 6.08e-59 | 197 |
MS.gene63114.t1 | MTR_8g468760 | 35.211 | 426 | 221 | 13 | 1 | 379 | 1 | 418 | 1.58e-56 | 191 |
MS.gene63114.t1 | MTR_8g014260 | 34.641 | 459 | 207 | 20 | 2 | 380 | 6 | 451 | 2.10e-54 | 186 |
MS.gene63114.t1 | MTR_8g077460 | 37.280 | 397 | 210 | 17 | 1 | 380 | 1 | 375 | 1.92e-52 | 179 |
MS.gene63114.t1 | MTR_5g092960 | 33.703 | 451 | 211 | 14 | 9 | 379 | 19 | 461 | 5.14e-51 | 177 |
MS.gene63114.t1 | MTR_8g468810 | 42.361 | 288 | 133 | 12 | 8 | 274 | 24 | 299 | 1.98e-47 | 164 |
MS.gene63114.t1 | MTR_8g468810 | 42.361 | 288 | 133 | 12 | 8 | 274 | 24 | 299 | 3.08e-47 | 164 |
MS.gene63114.t1 | MTR_8g468810 | 42.361 | 288 | 133 | 12 | 8 | 274 | 24 | 299 | 5.22e-47 | 164 |
MS.gene63114.t1 | MTR_8g468810 | 42.361 | 288 | 133 | 12 | 8 | 274 | 24 | 299 | 1.53e-46 | 163 |
MS.gene63114.t1 | MTR_4g032730 | 32.391 | 460 | 214 | 15 | 9 | 379 | 15 | 466 | 4.96e-46 | 164 |
MS.gene63114.t1 | MTR_8g468810 | 41.754 | 285 | 139 | 10 | 8 | 274 | 24 | 299 | 1.00e-45 | 163 |
MS.gene63114.t1 | MTR_8g468810 | 43.220 | 118 | 48 | 4 | 268 | 380 | 360 | 463 | 4.11e-19 | 89.0 |
MS.gene63114.t1 | MTR_2g086020 | 75.000 | 96 | 24 | 0 | 289 | 384 | 224 | 319 | 3.16e-44 | 155 |
MS.gene63114.t1 | MTR_2g086020 | 50.350 | 143 | 56 | 4 | 35 | 170 | 1 | 135 | 9.16e-32 | 122 |
MS.gene63114.t1 | MTR_8g062270 | 38.276 | 290 | 146 | 13 | 9 | 274 | 16 | 296 | 3.39e-41 | 151 |
MS.gene63114.t1 | MTR_8g062270 | 42.353 | 85 | 44 | 3 | 295 | 379 | 374 | 453 | 8.71e-13 | 69.7 |
MS.gene63114.t1 | MTR_8g467800 | 40.000 | 285 | 141 | 8 | 9 | 274 | 20 | 293 | 4.22e-40 | 145 |
MS.gene63114.t1 | MTR_8g467800 | 36.585 | 369 | 189 | 14 | 9 | 356 | 20 | 364 | 1.70e-39 | 146 |
MS.gene63114.t1 | MTR_8g467800 | 38.938 | 113 | 62 | 3 | 268 | 380 | 348 | 453 | 1.36e-14 | 75.5 |
MS.gene63114.t1 | MTR_8g468840 | 37.500 | 288 | 160 | 8 | 4 | 274 | 9 | 293 | 1.85e-37 | 140 |
MS.gene63114.t1 | MTR_8g468840 | 37.838 | 111 | 59 | 3 | 268 | 378 | 348 | 448 | 3.73e-13 | 70.9 |
MS.gene63114.t1 | MTR_5g092960 | 38.144 | 291 | 151 | 9 | 9 | 274 | 19 | 305 | 9.40e-37 | 138 |
MS.gene63114.t1 | MTR_8g445780 | 38.929 | 280 | 128 | 14 | 3 | 258 | 7 | 267 | 1.02e-35 | 135 |
MS.gene63114.t1 | MTR_5g021550 | 47.945 | 146 | 70 | 4 | 8 | 148 | 18 | 162 | 2.06e-31 | 117 |
MS.gene63114.t1 | MTR_3g099800 | 63.218 | 87 | 31 | 1 | 292 | 377 | 19 | 105 | 1.07e-29 | 110 |
MS.gene63114.t1 | MTR_7g032380 | 29.948 | 384 | 219 | 14 | 9 | 380 | 11 | 356 | 1.16e-28 | 115 |
MS.gene63114.t1 | MTR_4g024710 | 30.537 | 298 | 139 | 10 | 145 | 380 | 56 | 347 | 5.26e-27 | 110 |
MS.gene63114.t1 | MTR_3g108150 | 27.696 | 408 | 226 | 16 | 8 | 379 | 12 | 386 | 1.82e-24 | 103 |
MS.gene63114.t1 | MTR_0543s0010 | 28.205 | 390 | 239 | 15 | 7 | 379 | 84 | 449 | 1.94e-24 | 104 |
MS.gene63114.t1 | MTR_5g008950 | 27.792 | 403 | 214 | 18 | 14 | 380 | 4 | 365 | 5.71e-24 | 102 |
MS.gene63114.t1 | MTR_7g056433 | 26.961 | 408 | 234 | 15 | 8 | 380 | 11 | 389 | 6.05e-23 | 99.8 |
MS.gene63114.t1 | MTR_5g008920 | 26.700 | 397 | 258 | 15 | 1 | 380 | 1 | 381 | 1.04e-22 | 99.0 |
MS.gene63114.t1 | MTR_3g023630 | 28.756 | 386 | 247 | 16 | 6 | 380 | 5 | 373 | 1.24e-22 | 98.6 |
MS.gene63114.t1 | MTR_5g073420 | 28.767 | 365 | 217 | 15 | 7 | 352 | 9 | 349 | 1.42e-22 | 98.6 |
MS.gene63114.t1 | MTR_8g014290 | 41.447 | 152 | 77 | 6 | 8 | 148 | 9 | 159 | 2.12e-22 | 93.2 |
MS.gene63114.t1 | MTR_1g085120 | 27.612 | 402 | 239 | 13 | 9 | 380 | 92 | 471 | 5.81e-22 | 97.4 |
MS.gene63114.t1 | MTR_1g085120 | 27.612 | 402 | 239 | 13 | 9 | 380 | 167 | 546 | 8.84e-22 | 97.4 |
MS.gene63114.t1 | MTR_7g115270 | 26.601 | 406 | 245 | 15 | 8 | 377 | 11 | 399 | 2.07e-21 | 95.1 |
MS.gene63114.t1 | MTR_7g098510 | 25.505 | 396 | 261 | 11 | 3 | 380 | 12 | 391 | 2.85e-21 | 94.7 |
MS.gene63114.t1 | MTR_8g014210 | 44.248 | 113 | 49 | 4 | 268 | 380 | 133 | 231 | 1.55e-20 | 89.7 |
MS.gene63114.t1 | MTR_7g114710 | 26.316 | 399 | 220 | 14 | 9 | 380 | 13 | 364 | 2.64e-20 | 91.7 |
MS.gene63114.t1 | MTR_3g107100 | 27.007 | 411 | 242 | 19 | 9 | 382 | 11 | 400 | 3.26e-20 | 92.0 |
MS.gene63114.t1 | MTR_7g033915 | 27.436 | 390 | 228 | 18 | 9 | 379 | 11 | 364 | 4.31e-20 | 90.9 |
MS.gene63114.t1 | MTR_7g056277 | 25.935 | 401 | 245 | 13 | 4 | 379 | 254 | 627 | 4.80e-20 | 92.4 |
MS.gene63114.t1 | MTR_3g467400 | 24.439 | 401 | 238 | 13 | 9 | 380 | 3 | 367 | 4.84e-20 | 90.9 |
MS.gene63114.t1 | MTR_0492s0020 | 27.793 | 367 | 220 | 16 | 7 | 352 | 84 | 426 | 6.77e-20 | 91.3 |
MS.gene63114.t1 | MTR_2g007450 | 27.252 | 444 | 229 | 22 | 1 | 377 | 1 | 417 | 2.13e-19 | 89.7 |
MS.gene63114.t1 | MTR_5g058100 | 25.122 | 410 | 249 | 14 | 1 | 379 | 1 | 383 | 3.66e-19 | 88.6 |
MS.gene63114.t1 | MTR_1089s0010 | 25.000 | 392 | 254 | 15 | 9 | 380 | 8 | 379 | 5.49e-19 | 88.2 |
MS.gene63114.t1 | MTR_2g036470 | 25.369 | 406 | 258 | 16 | 2 | 379 | 7 | 395 | 6.17e-19 | 88.2 |
MS.gene63114.t1 | MTR_7g026500 | 26.866 | 402 | 246 | 16 | 7 | 379 | 12 | 394 | 7.89e-19 | 87.8 |
MS.gene63114.t1 | MTR_6g040270 | 28.021 | 389 | 238 | 19 | 11 | 377 | 10 | 378 | 7.93e-19 | 87.4 |
MS.gene63114.t1 | MTR_3g036250 | 25.635 | 394 | 233 | 13 | 9 | 377 | 5 | 363 | 9.54e-19 | 87.0 |
MS.gene63114.t1 | MTR_3g105060 | 28.021 | 389 | 234 | 17 | 9 | 380 | 14 | 373 | 1.41e-18 | 86.7 |
MS.gene63114.t1 | MTR_7g033990 | 28.827 | 392 | 240 | 16 | 3 | 374 | 5 | 377 | 1.70e-18 | 87.0 |
MS.gene63114.t1 | MTR_7g075820 | 24.812 | 399 | 261 | 11 | 7 | 377 | 4 | 391 | 2.36e-18 | 86.3 |
MS.gene63114.t1 | MTR_6g011460 | 28.389 | 391 | 246 | 15 | 9 | 380 | 46 | 421 | 2.70e-18 | 86.3 |
MS.gene63114.t1 | MTR_7g055943 | 26.585 | 410 | 245 | 17 | 4 | 380 | 35 | 421 | 3.11e-18 | 86.3 |
MS.gene63114.t1 | MTR_6g022500 | 28.021 | 389 | 250 | 14 | 9 | 380 | 101 | 476 | 5.47e-18 | 85.9 |
MS.gene63114.t1 | MTR_4g024745 | 29.562 | 274 | 123 | 13 | 154 | 363 | 17 | 284 | 5.95e-18 | 83.6 |
MS.gene63114.t1 | MTR_7g007080 | 28.395 | 405 | 242 | 19 | 8 | 385 | 3 | 386 | 8.67e-18 | 84.7 |
MS.gene63114.t1 | MTR_1g108820 | 27.930 | 401 | 232 | 16 | 9 | 377 | 8 | 383 | 9.70e-18 | 84.3 |
MS.gene63114.t1 | MTR_4g098590 | 30.081 | 369 | 211 | 18 | 11 | 347 | 1 | 354 | 1.22e-17 | 84.0 |
MS.gene63114.t1 | MTR_7g088260 | 24.810 | 395 | 257 | 13 | 6 | 380 | 88 | 462 | 1.29e-17 | 84.7 |
MS.gene63114.t1 | MTR_3g108560 | 27.273 | 396 | 238 | 18 | 8 | 379 | 19 | 388 | 3.88e-17 | 82.8 |
MS.gene63114.t1 | MTR_8g085430 | 33.500 | 200 | 110 | 9 | 9 | 195 | 11 | 200 | 4.58e-17 | 81.6 |
MS.gene63114.t1 | MTR_2g008320 | 27.981 | 411 | 228 | 20 | 6 | 380 | 49 | 427 | 1.92e-16 | 80.9 |
MS.gene63114.t1 | MTR_5g058000 | 27.363 | 402 | 226 | 19 | 9 | 379 | 8 | 374 | 1.95e-16 | 80.5 |
MS.gene63114.t1 | MTR_2g008310 | 26.667 | 405 | 229 | 19 | 9 | 380 | 2 | 371 | 3.41e-16 | 79.7 |
MS.gene63114.t1 | MTR_7g056447 | 33.168 | 202 | 109 | 9 | 1 | 192 | 1 | 186 | 4.06e-16 | 78.6 |
MS.gene63114.t1 | MTR_3g107160 | 26.650 | 394 | 249 | 15 | 8 | 380 | 9 | 383 | 1.14e-15 | 78.2 |
MS.gene63114.t1 | MTR_1g107385 | 26.277 | 411 | 245 | 14 | 6 | 377 | 29 | 420 | 1.18e-15 | 78.6 |
MS.gene63114.t1 | MTR_2g007500 | 33.971 | 209 | 102 | 8 | 1 | 195 | 1 | 187 | 1.29e-15 | 77.8 |
MS.gene63114.t1 | MTR_1g053025 | 27.654 | 405 | 237 | 18 | 9 | 377 | 2 | 386 | 1.82e-15 | 77.8 |
MS.gene63114.t1 | MTR_8g014230 | 40.476 | 84 | 48 | 2 | 290 | 373 | 17 | 98 | 6.96e-15 | 70.5 |
MS.gene63114.t1 | MTR_4g024720 | 34.969 | 163 | 82 | 6 | 9 | 149 | 17 | 177 | 1.28e-14 | 72.8 |
MS.gene63114.t1 | MTR_7g034115 | 26.753 | 385 | 241 | 13 | 9 | 372 | 11 | 375 | 1.71e-14 | 74.7 |
MS.gene63114.t1 | MTR_4g039440 | 27.228 | 404 | 237 | 18 | 9 | 380 | 34 | 412 | 2.35e-14 | 74.3 |
MS.gene63114.t1 | MTR_3g109982 | 34.375 | 192 | 110 | 7 | 8 | 195 | 12 | 191 | 3.26e-14 | 74.7 |
MS.gene63114.t1 | MTR_3g110010 | 34.375 | 192 | 110 | 7 | 8 | 195 | 12 | 191 | 3.43e-14 | 74.7 |
MS.gene63114.t1 | MTR_5g063950 | 25.743 | 404 | 213 | 18 | 9 | 377 | 8 | 359 | 1.51e-13 | 71.6 |
MS.gene63114.t1 | MTR_1g041245 | 31.658 | 199 | 104 | 10 | 9 | 193 | 11 | 191 | 4.14e-13 | 70.5 |
MS.gene63114.t1 | MTR_5g083890 | 23.604 | 394 | 245 | 15 | 8 | 358 | 5 | 385 | 5.65e-13 | 70.5 |
MS.gene63114.t1 | MTR_4g056030 | 34.146 | 205 | 113 | 8 | 9 | 202 | 9 | 202 | 1.09e-12 | 69.7 |
MS.gene63114.t1 | MTR_7g056287 | 31.250 | 192 | 120 | 7 | 9 | 195 | 3 | 187 | 1.88e-12 | 68.6 |
MS.gene63114.t1 | MTR_1g115245 | 33.333 | 159 | 95 | 6 | 3 | 156 | 18 | 170 | 2.90e-12 | 67.4 |
MS.gene63114.t1 | MTR_5g008910 | 32.374 | 139 | 68 | 5 | 246 | 380 | 186 | 302 | 4.40e-12 | 66.6 |
MS.gene63114.t1 | MTR_7g056420 | 29.949 | 197 | 98 | 9 | 1 | 193 | 1 | 161 | 5.34e-12 | 68.2 |
MS.gene63114.t1 | MTR_7g056430 | 29.949 | 197 | 98 | 9 | 1 | 193 | 1 | 161 | 5.60e-12 | 68.2 |
MS.gene63114.t1 | MTR_4g056020 | 32.843 | 204 | 115 | 7 | 1 | 193 | 1 | 193 | 7.56e-12 | 67.0 |
MS.gene63114.t1 | MTR_4g080787 | 26.540 | 211 | 132 | 7 | 3 | 196 | 13 | 217 | 2.22e-11 | 65.5 |
MS.gene63114.t1 | MTR_5g061680 | 33.333 | 198 | 114 | 9 | 7 | 196 | 9 | 196 | 2.81e-11 | 64.7 |
MS.gene63114.t1 | MTR_5g080710 | 28.272 | 191 | 121 | 5 | 9 | 193 | 33 | 213 | 3.90e-11 | 64.7 |
MS.gene63114.t1 | MTR_3g040700 | 23.864 | 352 | 219 | 13 | 9 | 339 | 43 | 366 | 5.14e-11 | 64.3 |
MS.gene63114.t1 | MTR_4g081030 | 32.323 | 198 | 110 | 8 | 7 | 198 | 15 | 194 | 6.90e-11 | 63.5 |
MS.gene63114.t1 | MTR_5g084070 | 29.500 | 200 | 121 | 6 | 1 | 193 | 1 | 187 | 8.74e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63114.t1 | AT4G10400 | 25.059 | 423 | 249 | 15 | 9 | 379 | 2 | 408 | 1.81e-19 | 89.7 |
MS.gene63114.t1 | AT4G10400 | 25.059 | 423 | 249 | 15 | 9 | 379 | 2 | 408 | 1.81e-19 | 89.7 |
MS.gene63114.t1 | AT4G10400 | 25.059 | 423 | 249 | 15 | 9 | 379 | 2 | 408 | 1.81e-19 | 89.7 |
MS.gene63114.t1 | AT5G56820 | 26.995 | 426 | 243 | 17 | 6 | 377 | 12 | 423 | 1.31e-18 | 87.4 |
MS.gene63114.t1 | AT4G26340 | 26.959 | 434 | 239 | 15 | 9 | 380 | 2 | 419 | 2.64e-18 | 86.3 |
MS.gene63114.t1 | AT3G59200 | 35.176 | 199 | 107 | 10 | 7 | 193 | 5 | 193 | 2.69e-17 | 82.8 |
MS.gene63114.t1 | AT3G59200 | 34.848 | 198 | 109 | 9 | 7 | 193 | 5 | 193 | 4.99e-17 | 83.2 |
MS.gene63114.t1 | AT4G13965 | 25.293 | 427 | 245 | 14 | 9 | 377 | 10 | 420 | 2.72e-16 | 80.5 |
MS.gene63114.t1 | AT1G32375 | 32.870 | 216 | 121 | 8 | 9 | 214 | 2 | 203 | 8.46e-16 | 79.0 |
MS.gene63114.t1 | AT1G32375 | 32.870 | 216 | 121 | 8 | 9 | 214 | 2 | 203 | 8.46e-16 | 79.0 |
MS.gene63114.t1 | AT4G09920 | 31.771 | 192 | 113 | 7 | 9 | 193 | 2 | 182 | 1.19e-15 | 77.4 |
MS.gene63114.t1 | AT4G09920 | 31.771 | 192 | 113 | 7 | 9 | 193 | 2 | 182 | 1.19e-15 | 77.4 |
MS.gene63114.t1 | AT5G50270 | 26.241 | 423 | 227 | 17 | 9 | 362 | 2 | 408 | 1.55e-15 | 78.2 |
MS.gene63114.t1 | AT4G09920 | 31.771 | 192 | 113 | 7 | 9 | 193 | 2 | 182 | 1.82e-15 | 76.6 |
MS.gene63114.t1 | AT4G09920 | 31.771 | 192 | 113 | 7 | 9 | 193 | 2 | 182 | 1.82e-15 | 76.6 |
MS.gene63114.t1 | AT4G09920 | 31.771 | 192 | 113 | 7 | 9 | 193 | 2 | 182 | 1.82e-15 | 76.6 |
MS.gene63114.t1 | AT1G48400 | 30.435 | 207 | 126 | 7 | 4 | 199 | 5 | 204 | 7.46e-15 | 76.3 |
MS.gene63114.t1 | AT1G48400 | 30.435 | 207 | 126 | 7 | 4 | 199 | 5 | 204 | 9.18e-15 | 75.9 |
MS.gene63114.t1 | AT4G00315 | 33.333 | 192 | 114 | 6 | 9 | 193 | 2 | 186 | 1.47e-14 | 75.1 |
MS.gene63114.t1 | AT1G55660 | 32.323 | 198 | 116 | 7 | 5 | 193 | 49 | 237 | 1.59e-14 | 74.7 |
MS.gene63114.t1 | AT1G55660 | 32.323 | 198 | 116 | 7 | 5 | 193 | 49 | 237 | 1.97e-14 | 75.1 |
MS.gene63114.t1 | AT4G14103 | 32.308 | 195 | 118 | 5 | 6 | 193 | 5 | 192 | 2.00e-14 | 74.7 |
MS.gene63114.t1 | AT4G14103 | 32.308 | 195 | 118 | 5 | 6 | 193 | 5 | 192 | 2.00e-14 | 74.7 |
MS.gene63114.t1 | AT5G56440 | 33.508 | 191 | 111 | 7 | 9 | 193 | 2 | 182 | 2.02e-14 | 74.7 |
MS.gene63114.t1 | AT4G14103 | 31.980 | 197 | 116 | 7 | 6 | 193 | 5 | 192 | 2.17e-14 | 74.7 |
MS.gene63114.t1 | AT3G52680 | 25.508 | 443 | 249 | 13 | 7 | 381 | 19 | 448 | 3.04e-14 | 74.3 |
MS.gene63114.t1 | AT5G56560 | 25.917 | 436 | 239 | 21 | 8 | 380 | 4 | 418 | 3.44e-14 | 73.9 |
MS.gene63114.t1 | AT4G00160 | 33.679 | 193 | 113 | 5 | 7 | 193 | 14 | 197 | 7.74e-14 | 73.2 |
MS.gene63114.t1 | AT3G50710 | 30.570 | 193 | 117 | 5 | 9 | 193 | 2 | 185 | 1.14e-13 | 72.4 |
MS.gene63114.t1 | AT4G13985 | 30.542 | 203 | 109 | 9 | 9 | 193 | 19 | 207 | 1.81e-13 | 72.0 |
MS.gene63114.t1 | AT3G49030 | 25.000 | 420 | 258 | 16 | 3 | 382 | 15 | 417 | 3.91e-13 | 70.9 |
MS.gene63114.t1 | AT5G56410 | 30.102 | 196 | 115 | 6 | 16 | 193 | 10 | 201 | 4.76e-13 | 70.9 |
MS.gene63114.t1 | AT5G56420 | 30.288 | 208 | 122 | 9 | 6 | 205 | 3 | 195 | 8.81e-13 | 69.7 |
MS.gene63114.t1 | AT5G56420 | 30.288 | 208 | 122 | 9 | 6 | 205 | 3 | 195 | 8.81e-13 | 69.7 |
MS.gene63114.t1 | AT5G56420 | 30.288 | 208 | 122 | 9 | 6 | 205 | 3 | 195 | 8.81e-13 | 69.7 |
MS.gene63114.t1 | AT1G78760 | 24.169 | 451 | 253 | 20 | 4 | 381 | 11 | 445 | 8.84e-13 | 69.7 |
MS.gene63114.t1 | AT5G22720 | 23.491 | 464 | 248 | 19 | 5 | 379 | 19 | 464 | 1.43e-12 | 69.3 |
MS.gene63114.t1 | AT3G59190 | 30.952 | 210 | 119 | 10 | 1 | 193 | 1 | 201 | 1.61e-12 | 69.3 |
MS.gene63114.t1 | AT3G59190 | 30.952 | 210 | 119 | 10 | 1 | 193 | 1 | 201 | 1.71e-12 | 68.6 |
MS.gene63114.t1 | AT3G49030 | 23.928 | 443 | 260 | 16 | 3 | 382 | 15 | 443 | 2.74e-12 | 68.2 |
MS.gene63114.t1 | AT4G14096 | 30.729 | 192 | 123 | 4 | 6 | 193 | 5 | 190 | 4.63e-12 | 67.8 |
MS.gene63114.t1 | AT4G14096 | 30.729 | 192 | 123 | 4 | 6 | 193 | 5 | 190 | 4.63e-12 | 67.8 |
MS.gene63114.t1 | AT2G04230 | 25.122 | 410 | 216 | 17 | 8 | 343 | 12 | 404 | 5.29e-12 | 67.4 |
MS.gene63114.t1 | AT5G56370 | 24.480 | 433 | 251 | 13 | 9 | 379 | 2 | 420 | 8.23e-12 | 66.6 |
MS.gene63114.t1 | AT5G56370 | 24.480 | 433 | 251 | 13 | 9 | 379 | 2 | 420 | 8.23e-12 | 66.6 |
MS.gene63114.t1 | AT4G15060 | 29.231 | 195 | 117 | 8 | 9 | 193 | 26 | 209 | 9.72e-12 | 66.6 |
MS.gene63114.t1 | AT4G15060 | 29.231 | 195 | 117 | 8 | 9 | 193 | 172 | 355 | 1.32e-11 | 66.6 |
MS.gene63114.t1 | AT3G52680 | 30.876 | 217 | 130 | 5 | 7 | 215 | 19 | 223 | 1.74e-11 | 65.5 |
MS.gene63114.t1 | AT1G49610 | 30.526 | 190 | 85 | 9 | 9 | 198 | 26 | 168 | 3.49e-11 | 64.3 |
MS.gene63114.t1 | AT3G26922 | 30.570 | 193 | 120 | 6 | 8 | 196 | 13 | 195 | 6.98e-11 | 63.2 |
MS.gene63114.t1 | AT3G26922 | 30.570 | 193 | 120 | 6 | 8 | 196 | 13 | 195 | 6.98e-11 | 63.2 |
MS.gene63114.t1 | AT1G05080 | 32.124 | 193 | 115 | 6 | 7 | 193 | 11 | 193 | 7.05e-11 | 63.9 |
MS.gene63114.t1 | AT5G50270 | 31.953 | 169 | 101 | 4 | 9 | 173 | 2 | 160 | 7.70e-11 | 63.2 |
MS.gene63114.t1 | AT3G59170 | 30.909 | 220 | 118 | 9 | 7 | 195 | 5 | 221 | 9.29e-11 | 63.5 |
Find 105 sgRNAs with CRISPR-Local
Find 117 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAGAGATTATATATCATCTT+AGG | 0.223173 | 8.1:+43187479 | MS.gene63114:CDS |
TGTAACTGGAAATATCAAAT+TGG | 0.241405 | 8.1:+43187679 | MS.gene63114:CDS |
TGATATTTCCAGTTACATTA+AGG | 0.290409 | 8.1:-43187673 | None:intergenic |
CATTGGCCATTTCCACAATA+TGG | 0.306123 | 8.1:+43187706 | MS.gene63114:CDS |
GCCTTACTCTCTGGCTGCCC+TGG | 0.326871 | 8.1:+43187521 | MS.gene63114:CDS |
TCCGGCTTCCATGTTCTTAT+AGG | 0.334720 | 8.1:-43187935 | None:intergenic |
TCGACAAATTCGCTTTCAAC+TGG | 0.344429 | 8.1:-43187755 | None:intergenic |
CATCGTAGCTACGGAGGTTC+TGG | 0.348406 | 8.1:-43186981 | None:intergenic |
AGAAGTTTGGTGACATAGTC+TGG | 0.364604 | 8.1:-43187581 | None:intergenic |
GGATTTCGATCTCTTGGATC+TGG | 0.374285 | 8.1:-43187618 | None:intergenic |
CTCGCCGGTGGCGTTATCTC+TGG | 0.383892 | 8.1:+43187014 | MS.gene63114:CDS |
TTCGTGTCATTCAATGTCTA+AGG | 0.383973 | 8.1:+43187826 | MS.gene63114:CDS |
CTTCCACCATATTGTGGAAA+TGG | 0.386237 | 8.1:-43187712 | None:intergenic |
GCCAGGGCAGCCAGAGAGTA+AGG | 0.387050 | 8.1:-43187522 | None:intergenic |
GACCCAGTTGTCTCTCGTTA+AGG | 0.389452 | 8.1:+43188190 | MS.gene63114:CDS |
AATATCAAATTGGGCATCAT+TGG | 0.390949 | 8.1:+43187689 | MS.gene63114:CDS |
TCACCTTAACGAGAGACAAC+TGG | 0.395455 | 8.1:-43188193 | None:intergenic |
TGGAGTTACCTTAATGTAAC+TGG | 0.395592 | 8.1:+43187665 | MS.gene63114:CDS |
CTCGGAGGTATTTGAGAATA+GGG | 0.397474 | 8.1:-43187778 | None:intergenic |
AGGTGGGATTTGAGACATTC+AGG | 0.399944 | 8.1:-43187971 | None:intergenic |
TTGTGGATCCTTGCTGCCGC+TGG | 0.408250 | 8.1:+43187226 | MS.gene63114:CDS |
TCAGAAGTTGCCTTACTCTC+TGG | 0.409070 | 8.1:+43187512 | MS.gene63114:CDS |
ACAATTGAATAGAGTCGAAT+AGG | 0.410599 | 8.1:-43187207 | None:intergenic |
TAGACAGCTCAATCTGTCTT+TGG | 0.416873 | 8.1:-43186918 | None:intergenic |
CTGCCCTGGCCTCGAAACTT+TGG | 0.417221 | 8.1:+43187535 | MS.gene63114:CDS |
AGAGATTATATATCATCTTA+GGG | 0.423624 | 8.1:+43187480 | MS.gene63114:CDS |
ATATCCTTCTATGTGAATAT+AGG | 0.424387 | 8.1:-43187996 | None:intergenic |
CTGACCTATATTCACATAGA+AGG | 0.433553 | 8.1:+43187992 | MS.gene63114:CDS |
TCTCGGAGGTATTTGAGAAT+AGG | 0.436627 | 8.1:-43187779 | None:intergenic |
GTAACTGGAAATATCAAATT+GGG | 0.441182 | 8.1:+43187680 | MS.gene63114:CDS |
CGTCGGAGAAGTTGAAGACT+TGG | 0.448814 | 8.1:-43187045 | None:intergenic |
TCATATAATCTTTGTGATCT+CGG | 0.452641 | 8.1:-43187796 | None:intergenic |
AGTGGTGGATTTCGATCTCT+TGG | 0.457068 | 8.1:-43187624 | None:intergenic |
GCACAAATCTTGTTTCCCTC+AGG | 0.473458 | 8.1:+43187323 | MS.gene63114:CDS |
CTCACTATCACCTATCCATT+CGG | 0.478226 | 8.1:+43187175 | MS.gene63114:CDS |
TGGGTCAAATTTAAGTTGGC+AGG | 0.480559 | 8.1:-43188173 | None:intergenic |
GGAAGGTGGAATGAGAAGTT+TGG | 0.482287 | 8.1:-43187594 | None:intergenic |
GTGCAATTGATTAGAAAGGA+AGG | 0.484363 | 8.1:-43187304 | None:intergenic |
GATTACTGCGAAATCCTTGA+TGG | 0.487090 | 8.1:-43187275 | None:intergenic |
ATTTGTGCAATTGATTAGAA+AGG | 0.490101 | 8.1:-43187308 | None:intergenic |
ATATGCAACAAGAGCGAGTC+CGG | 0.490729 | 8.1:-43186941 | None:intergenic |
TATTCGACTCTATTCAATTG+TGG | 0.493927 | 8.1:+43187209 | MS.gene63114:CDS |
CCATCCAAAGTTTCGAGGCC+AGG | 0.494526 | 8.1:-43187539 | None:intergenic |
GATATTCAGCAAACGTAAGC+TGG | 0.495796 | 8.1:-43188033 | None:intergenic |
CATCCAAAGTTTCGAGGCCA+GGG | 0.497991 | 8.1:-43187538 | None:intergenic |
CTTCTATGTGAATATAGGTC+AGG | 0.500493 | 8.1:-43187991 | None:intergenic |
CGACAAATTCGCTTTCAACT+GGG | 0.505565 | 8.1:-43187754 | None:intergenic |
CAACTGGGTCAAATTTAAGT+TGG | 0.507227 | 8.1:-43188177 | None:intergenic |
GATCTCTTGGATCTGGAGGA+AGG | 0.510435 | 8.1:-43187611 | None:intergenic |
ATTCACATAGAAGGATATCA+AGG | 0.515119 | 8.1:+43188001 | MS.gene63114:CDS |
CTGACAATTTCACCTGGAGC+TGG | 0.518959 | 8.1:+43187645 | MS.gene63114:CDS |
GACGAGAGTCATCGTAGCTA+CGG | 0.525998 | 8.1:-43186990 | None:intergenic |
CACCTTAACGAGAGACAACT+GGG | 0.527843 | 8.1:-43188192 | None:intergenic |
TTCTTGAAGGTGAGGGCCAG+CGG | 0.531030 | 8.1:-43187242 | None:intergenic |
GAATGTCGCGGGATTTGCTG+AGG | 0.534092 | 8.1:-43187141 | None:intergenic |
TGGTGAGAGAGAGTTCTTGA+AGG | 0.534802 | 8.1:-43187255 | None:intergenic |
TCAGGAACCGTTGTTGACTC+CGG | 0.538488 | 8.1:-43187953 | None:intergenic |
AGAGAGAGTTCTTGAAGGTG+AGG | 0.541451 | 8.1:-43187250 | None:intergenic |
GGAGGTTCTGGTTGGAAGGA+AGG | 0.541455 | 8.1:-43186969 | None:intergenic |
CGATGACTCTCGTCTCTCGC+CGG | 0.542962 | 8.1:+43186999 | MS.gene63114:CDS |
TGATTAGAAAGGAAGGAGGG+AGG | 0.548156 | 8.1:-43187297 | None:intergenic |
CTACGGAGGTTCTGGTTGGA+AGG | 0.548976 | 8.1:-43186973 | None:intergenic |
AGTAACCATCCAAAGTTTCG+AGG | 0.549516 | 8.1:-43187544 | None:intergenic |
GACAAATTCGCTTTCAACTG+GGG | 0.549522 | 8.1:-43187753 | None:intergenic |
ATATATAATCTCTTCAGCGA+TGG | 0.558413 | 8.1:-43187470 | None:intergenic |
ACCTATAAGAACATGGAAGC+CGG | 0.559351 | 8.1:+43187934 | MS.gene63114:CDS |
AGACAGATTGAGCTGTCTAC+CGG | 0.560720 | 8.1:+43186922 | MS.gene63114:CDS |
AGAACTCTCTCTCACCATCA+AGG | 0.562485 | 8.1:+43187261 | MS.gene63114:CDS |
GAAATGCTTCCACCATATTG+TGG | 0.562697 | 8.1:-43187718 | None:intergenic |
TTTCGATCTCTTGGATCTGG+AGG | 0.569075 | 8.1:-43187615 | None:intergenic |
CCACCACTGACAATTTCACC+TGG | 0.571233 | 8.1:+43187639 | MS.gene63114:CDS |
AATGTCGCGGGATTTGCTGA+GGG | 0.574122 | 8.1:-43187140 | None:intergenic |
CCTGGCCTCGAAACTTTGGA+TGG | 0.574792 | 8.1:+43187539 | MS.gene63114:CDS |
CTATGTGAATATAGGTCAGG+TGG | 0.580589 | 8.1:-43187988 | None:intergenic |
GAACATGCCACCGAATGGAT+AGG | 0.581081 | 8.1:-43187185 | None:intergenic |
GGTGAGGGCCAGCGGCAGCA+AGG | 0.584057 | 8.1:-43187234 | None:intergenic |
GTAGCTACGGAGGTTCTGGT+TGG | 0.584835 | 8.1:-43186977 | None:intergenic |
CCAGGTGAAATTGTCAGTGG+TGG | 0.585148 | 8.1:-43187639 | None:intergenic |
AAGATTAACTGATATACCAA+GGG | 0.586408 | 8.1:+43188141 | MS.gene63114:CDS |
ATTAAGGTAACTCCAGCTCC+AGG | 0.586794 | 8.1:-43187657 | None:intergenic |
GAGAGAGTTCTTGAAGGTGA+GGG | 0.588776 | 8.1:-43187249 | None:intergenic |
CCGGTGGCGTTATCTCTGGA+AGG | 0.590496 | 8.1:+43187018 | MS.gene63114:CDS |
CAATTGATTAGAAAGGAAGG+AGG | 0.593311 | 8.1:-43187301 | None:intergenic |
AATAGGAACATGCCACCGAA+TGG | 0.595662 | 8.1:-43187190 | None:intergenic |
TTTGTAACATAGCGACTCGT+CGG | 0.610095 | 8.1:-43187062 | None:intergenic |
TGGCAGGTGACAGAGCCCCT+TGG | 0.611510 | 8.1:-43188157 | None:intergenic |
AAAGATTAACTGATATACCA+AGG | 0.612225 | 8.1:+43188140 | MS.gene63114:CDS |
AATTGATTAGAAAGGAAGGA+GGG | 0.613021 | 8.1:-43187300 | None:intergenic |
TGGCCATTTCCACAATATGG+TGG | 0.613839 | 8.1:+43187709 | MS.gene63114:CDS |
TGACTCTCGTCTCTCGCCGG+TGG | 0.621406 | 8.1:+43187002 | MS.gene63114:CDS |
GTTTGGTGACATAGTCTGGA+GGG | 0.638914 | 8.1:-43187577 | None:intergenic |
AACTATCACCTATAAGAACA+TGG | 0.640392 | 8.1:+43187927 | MS.gene63114:CDS |
TATGTGAATATAGGTCAGGT+GGG | 0.640734 | 8.1:-43187987 | None:intergenic |
CTCTTGGATCTGGAGGAAGG+TGG | 0.642430 | 8.1:-43187608 | None:intergenic |
CCTTCCAGAGATAACGCCAC+CGG | 0.649705 | 8.1:-43187018 | None:intergenic |
GAGATTATATATCATCTTAG+GGG | 0.656983 | 8.1:+43187481 | MS.gene63114:CDS |
ACTATCACCTATCCATTCGG+TGG | 0.673109 | 8.1:+43187178 | MS.gene63114:CDS |
GCTCCAGGTGAAATTGTCAG+TGG | 0.674603 | 8.1:-43187642 | None:intergenic |
CGTAATCGACGATGGCACGA+CGG | 0.688738 | 8.1:+43186888 | None:intergenic |
AGTTTGGTGACATAGTCTGG+AGG | 0.688870 | 8.1:-43187578 | None:intergenic |
TGATACTTCAATGCACACAA+CGG | 0.689220 | 8.1:+43188099 | MS.gene63114:CDS |
TATAATCTTTGTGATCTCGG+AGG | 0.691344 | 8.1:-43187793 | None:intergenic |
ATGGAAGCCGGAGTCAACAA+CGG | 0.694182 | 8.1:+43187946 | MS.gene63114:CDS |
GAGAGTCATCGTAGCTACGG+AGG | 0.707835 | 8.1:-43186987 | None:intergenic |
AGATTAACTGATATACCAAG+GGG | 0.725053 | 8.1:+43188142 | MS.gene63114:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAGAGATTATATATCATCTT+AGG | + | chr8.1:43187479-43187498 | MS.gene63114:CDS | 20.0% |
!! | AGAGATTATATATCATCTTA+GGG | + | chr8.1:43187480-43187499 | MS.gene63114:CDS | 20.0% |
!!! | AAGGTGAAGTTTTATTTTTA+TGG | + | chr8.1:43187845-43187864 | MS.gene63114:intron | 20.0% |
! | AAAGATTAACTGATATACCA+AGG | + | chr8.1:43188140-43188159 | MS.gene63114:CDS | 25.0% |
! | AACTAAAGAAACACGATTTA+AGG | - | chr8.1:43187360-43187379 | None:intergenic | 25.0% |
! | AAGATTAACTGATATACCAA+GGG | + | chr8.1:43188141-43188160 | MS.gene63114:CDS | 25.0% |
! | ATATCCTTCTATGTGAATAT+AGG | - | chr8.1:43187999-43188018 | None:intergenic | 25.0% |
! | ATTTGTGCAATTGATTAGAA+AGG | - | chr8.1:43187311-43187330 | None:intergenic | 25.0% |
! | GAGATTATATATCATCTTAG+GGG | + | chr8.1:43187481-43187500 | MS.gene63114:CDS | 25.0% |
! | GTAACTGGAAATATCAAATT+GGG | + | chr8.1:43187680-43187699 | MS.gene63114:CDS | 25.0% |
! | TCATATAATCTTTGTGATCT+CGG | - | chr8.1:43187799-43187818 | None:intergenic | 25.0% |
! | TGATATTTCCAGTTACATTA+AGG | - | chr8.1:43187676-43187695 | None:intergenic | 25.0% |
! | TGTAACTGGAAATATCAAAT+TGG | + | chr8.1:43187679-43187698 | MS.gene63114:CDS | 25.0% |
!! | ACTTGTTTGTCTTTTCAAAA+CGG | + | chr8.1:43187396-43187415 | MS.gene63114:intron | 25.0% |
AACTATCACCTATAAGAACA+TGG | + | chr8.1:43187927-43187946 | MS.gene63114:CDS | 30.0% | |
AATATCAAATTGGGCATCAT+TGG | + | chr8.1:43187689-43187708 | MS.gene63114:CDS | 30.0% | |
AATTGATTAGAAAGGAAGGA+GGG | - | chr8.1:43187303-43187322 | None:intergenic | 30.0% | |
ACAATTGAATAGAGTCGAAT+AGG | - | chr8.1:43187210-43187229 | None:intergenic | 30.0% | |
AGATTAACTGATATACCAAG+GGG | + | chr8.1:43188142-43188161 | MS.gene63114:CDS | 30.0% | |
ATATATAATCTCTTCAGCGA+TGG | - | chr8.1:43187473-43187492 | None:intergenic | 30.0% | |
ATTCACATAGAAGGATATCA+AGG | + | chr8.1:43188001-43188020 | MS.gene63114:CDS | 30.0% | |
TATTCGACTCTATTCAATTG+TGG | + | chr8.1:43187209-43187228 | MS.gene63114:CDS | 30.0% | |
! | ATTGAATTTTTGAATGTCGC+GGG | - | chr8.1:43187155-43187174 | None:intergenic | 30.0% |
! | CAGTTAATCTTTTGACAGAA+TGG | - | chr8.1:43188132-43188151 | None:intergenic | 30.0% |
! | GATTGAATTTTTGAATGTCG+CGG | - | chr8.1:43187156-43187175 | None:intergenic | 30.0% |
AAGGATGATAATTCACCTGA+GGG | - | chr8.1:43187341-43187360 | None:intergenic | 35.0% | |
CAACTGGGTCAAATTTAAGT+TGG | - | chr8.1:43188180-43188199 | None:intergenic | 35.0% | |
CAATTGATTAGAAAGGAAGG+AGG | - | chr8.1:43187304-43187323 | None:intergenic | 35.0% | |
CTGACCTATATTCACATAGA+AGG | + | chr8.1:43187992-43188011 | MS.gene63114:CDS | 35.0% | |
CTTCTATGTGAATATAGGTC+AGG | - | chr8.1:43187994-43188013 | None:intergenic | 35.0% | |
GTGCAATTGATTAGAAAGGA+AGG | - | chr8.1:43187307-43187326 | None:intergenic | 35.0% | |
TAAGGATGATAATTCACCTG+AGG | - | chr8.1:43187342-43187361 | None:intergenic | 35.0% | |
TATAATCTTTGTGATCTCGG+AGG | - | chr8.1:43187796-43187815 | None:intergenic | 35.0% | |
TATGTGAATATAGGTCAGGT+GGG | - | chr8.1:43187990-43188009 | None:intergenic | 35.0% | |
TGATACTTCAATGCACACAA+CGG | + | chr8.1:43188099-43188118 | MS.gene63114:CDS | 35.0% | |
TGGAGTTACCTTAATGTAAC+TGG | + | chr8.1:43187665-43187684 | MS.gene63114:CDS | 35.0% | |
! | TTCGTGTCATTCAATGTCTA+AGG | + | chr8.1:43187826-43187845 | MS.gene63114:CDS | 35.0% |
!! | CGTTTGCTGAATATCTTTTG+AGG | + | chr8.1:43188041-43188060 | MS.gene63114:CDS | 35.0% |
!! | GCTGAATATCTTTTGAGGAA+CGG | + | chr8.1:43188046-43188065 | MS.gene63114:CDS | 35.0% |
ACCTATAAGAACATGGAAGC+CGG | + | chr8.1:43187934-43187953 | MS.gene63114:CDS | 40.0% | |
AGTAACCATCCAAAGTTTCG+AGG | - | chr8.1:43187547-43187566 | None:intergenic | 40.0% | |
ATACCTCCGTCTCTTATTGT+TGG | + | chr8.1:43187897-43187916 | MS.gene63114:intron | 40.0% | |
CATTGGCCATTTCCACAATA+TGG | + | chr8.1:43187706-43187725 | MS.gene63114:CDS | 40.0% | |
CGACAAATTCGCTTTCAACT+GGG | - | chr8.1:43187757-43187776 | None:intergenic | 40.0% | |
CTATGTGAATATAGGTCAGG+TGG | - | chr8.1:43187991-43188010 | None:intergenic | 40.0% | |
CTCACTATCACCTATCCATT+CGG | + | chr8.1:43187175-43187194 | MS.gene63114:CDS | 40.0% | |
CTCCTACCAACAATAAGAGA+CGG | - | chr8.1:43187906-43187925 | None:intergenic | 40.0% | |
CTTCCACCATATTGTGGAAA+TGG | - | chr8.1:43187715-43187734 | None:intergenic | 40.0% | |
GAAATGCTTCCACCATATTG+TGG | - | chr8.1:43187721-43187740 | None:intergenic | 40.0% | |
GACAAATTCGCTTTCAACTG+GGG | - | chr8.1:43187756-43187775 | None:intergenic | 40.0% | |
GATATTCAGCAAACGTAAGC+TGG | - | chr8.1:43188036-43188055 | None:intergenic | 40.0% | |
GATTACTGCGAAATCCTTGA+TGG | - | chr8.1:43187278-43187297 | None:intergenic | 40.0% | |
TAGACAGCTCAATCTGTCTT+TGG | - | chr8.1:43186921-43186940 | None:intergenic | 40.0% | |
TCGACAAATTCGCTTTCAAC+TGG | - | chr8.1:43187758-43187777 | None:intergenic | 40.0% | |
TTTGTAACATAGCGACTCGT+CGG | - | chr8.1:43187065-43187084 | None:intergenic | 40.0% | |
! | AGAAGTTTGGTGACATAGTC+TGG | - | chr8.1:43187584-43187603 | None:intergenic | 40.0% |
!! | CTCGGAGGTATTTGAGAATA+GGG | - | chr8.1:43187781-43187800 | None:intergenic | 40.0% |
!! | TCTCGGAGGTATTTGAGAAT+AGG | - | chr8.1:43187782-43187801 | None:intergenic | 40.0% |
!! | TGGGTCAAATTTAAGTTGGC+AGG | - | chr8.1:43188176-43188195 | None:intergenic | 40.0% |
AATAGGAACATGCCACCGAA+TGG | - | chr8.1:43187193-43187212 | None:intergenic | 45.0% | |
ACTATCACCTATCCATTCGG+TGG | + | chr8.1:43187178-43187197 | MS.gene63114:CDS | 45.0% | |
AGAACTCTCTCTCACCATCA+AGG | + | chr8.1:43187261-43187280 | MS.gene63114:CDS | 45.0% | |
AGACAGATTGAGCTGTCTAC+CGG | + | chr8.1:43186922-43186941 | MS.gene63114:CDS | 45.0% | |
AGAGAGAGTTCTTGAAGGTG+AGG | - | chr8.1:43187253-43187272 | None:intergenic | 45.0% | |
ATATGCAACAAGAGCGAGTC+CGG | - | chr8.1:43186944-43186963 | None:intergenic | 45.0% | |
ATTAAGGTAACTCCAGCTCC+AGG | - | chr8.1:43187660-43187679 | None:intergenic | 45.0% | |
CTACCAACAATAAGAGACGG+AGG | - | chr8.1:43187903-43187922 | None:intergenic | 45.0% | |
CTCCGTCTCTTATTGTTGGT+AGG | + | chr8.1:43187901-43187920 | MS.gene63114:intron | 45.0% | |
GAGAGAGTTCTTGAAGGTGA+GGG | - | chr8.1:43187252-43187271 | None:intergenic | 45.0% | |
GGAAGGTGGAATGAGAAGTT+TGG | - | chr8.1:43187597-43187616 | None:intergenic | 45.0% | |
GGATTTCGATCTCTTGGATC+TGG | - | chr8.1:43187621-43187640 | None:intergenic | 45.0% | |
TCAGAAGTTGCCTTACTCTC+TGG | + | chr8.1:43187512-43187531 | MS.gene63114:CDS | 45.0% | |
TCCGGCTTCCATGTTCTTAT+AGG | - | chr8.1:43187938-43187957 | None:intergenic | 45.0% | |
TGATTAGAAAGGAAGGAGGG+AGG | - | chr8.1:43187300-43187319 | None:intergenic | 45.0% | |
TGGCCATTTCCACAATATGG+TGG | + | chr8.1:43187709-43187728 | MS.gene63114:CDS | 45.0% | |
TGGTGAGAGAGAGTTCTTGA+AGG | - | chr8.1:43187258-43187277 | None:intergenic | 45.0% | |
TTTCGATCTCTTGGATCTGG+AGG | - | chr8.1:43187618-43187637 | None:intergenic | 45.0% | |
! | AGGTGGGATTTGAGACATTC+AGG | - | chr8.1:43187974-43187993 | None:intergenic | 45.0% |
! | AGTTTGGTGACATAGTCTGG+AGG | - | chr8.1:43187581-43187600 | None:intergenic | 45.0% |
! | CGTCTCTTATTGTTGGTAGG+AGG | + | chr8.1:43187904-43187923 | MS.gene63114:intron | 45.0% |
! | GCACAAATCTTGTTTCCCTC+AGG | + | chr8.1:43187323-43187342 | MS.gene63114:CDS | 45.0% |
! | GTTTGGTGACATAGTCTGGA+GGG | - | chr8.1:43187580-43187599 | None:intergenic | 45.0% |
!! | AGTGGTGGATTTCGATCTCT+TGG | - | chr8.1:43187627-43187646 | None:intergenic | 45.0% |
!! | GAGACGGAGGTATTCTCAAT+AGG | - | chr8.1:43187890-43187909 | None:intergenic | 45.0% |
ATGGAAGCCGGAGTCAACAA+CGG | + | chr8.1:43187946-43187965 | MS.gene63114:CDS | 50.0% | |
CATCCAAAGTTTCGAGGCCA+GGG | - | chr8.1:43187541-43187560 | None:intergenic | 50.0% | |
CCACCACTGACAATTTCACC+TGG | + | chr8.1:43187639-43187658 | MS.gene63114:CDS | 50.0% | |
CCAGGTGAAATTGTCAGTGG+TGG | - | chr8.1:43187642-43187661 | None:intergenic | 50.0% | |
CGTCGGAGAAGTTGAAGACT+TGG | - | chr8.1:43187048-43187067 | None:intergenic | 50.0% | |
CTGACAATTTCACCTGGAGC+TGG | + | chr8.1:43187645-43187664 | MS.gene63114:CDS | 50.0% | |
GAACATGCCACCGAATGGAT+AGG | - | chr8.1:43187188-43187207 | None:intergenic | 50.0% | |
GACGAGAGTCATCGTAGCTA+CGG | - | chr8.1:43186993-43187012 | None:intergenic | 50.0% | |
GATCTCTTGGATCTGGAGGA+AGG | - | chr8.1:43187614-43187633 | None:intergenic | 50.0% | |
GCTCCAGGTGAAATTGTCAG+TGG | - | chr8.1:43187645-43187664 | None:intergenic | 50.0% | |
!! | AATGTCGCGGGATTTGCTGA+GGG | - | chr8.1:43187143-43187162 | None:intergenic | 50.0% |
!! | TCAGGAACCGTTGTTGACTC+CGG | - | chr8.1:43187956-43187975 | None:intergenic | 50.0% |
CATCGTAGCTACGGAGGTTC+TGG | - | chr8.1:43186984-43187003 | None:intergenic | 55.0% | |
CCATCCAAAGTTTCGAGGCC+AGG | - | chr8.1:43187542-43187561 | None:intergenic | 55.0% | |
CCTGGCCTCGAAACTTTGGA+TGG | + | chr8.1:43187539-43187558 | MS.gene63114:CDS | 55.0% | |
CCTTCCAGAGATAACGCCAC+CGG | - | chr8.1:43187021-43187040 | None:intergenic | 55.0% | |
CTCTTGGATCTGGAGGAAGG+TGG | - | chr8.1:43187611-43187630 | None:intergenic | 55.0% | |
GAGAGTCATCGTAGCTACGG+AGG | - | chr8.1:43186990-43187009 | None:intergenic | 55.0% | |
TTCTTGAAGGTGAGGGCCAG+CGG | - | chr8.1:43187245-43187264 | None:intergenic | 55.0% | |
! | CTACGGAGGTTCTGGTTGGA+AGG | - | chr8.1:43186976-43186995 | None:intergenic | 55.0% |
! | GGAGGTTCTGGTTGGAAGGA+AGG | - | chr8.1:43186972-43186991 | None:intergenic | 55.0% |
! | GTAGCTACGGAGGTTCTGGT+TGG | - | chr8.1:43186980-43186999 | None:intergenic | 55.0% |
!! | GAATGTCGCGGGATTTGCTG+AGG | - | chr8.1:43187144-43187163 | None:intergenic | 55.0% |
CCGGTGGCGTTATCTCTGGA+AGG | + | chr8.1:43187018-43187037 | MS.gene63114:CDS | 60.0% | |
CGATGACTCTCGTCTCTCGC+CGG | + | chr8.1:43186999-43187018 | MS.gene63114:CDS | 60.0% | |
CTGCCCTGGCCTCGAAACTT+TGG | + | chr8.1:43187535-43187554 | MS.gene63114:CDS | 60.0% | |
TTGTGGATCCTTGCTGCCGC+TGG | + | chr8.1:43187226-43187245 | MS.gene63114:CDS | 60.0% | |
CTCGCCGGTGGCGTTATCTC+TGG | + | chr8.1:43187014-43187033 | MS.gene63114:CDS | 65.0% | |
GCCAGGGCAGCCAGAGAGTA+AGG | - | chr8.1:43187525-43187544 | None:intergenic | 65.0% | |
GCCTTACTCTCTGGCTGCCC+TGG | + | chr8.1:43187521-43187540 | MS.gene63114:CDS | 65.0% | |
TGACTCTCGTCTCTCGCCGG+TGG | + | chr8.1:43187002-43187021 | MS.gene63114:CDS | 65.0% | |
TGGCAGGTGACAGAGCCCCT+TGG | - | chr8.1:43188160-43188179 | None:intergenic | 65.0% | |
GGTGAGGGCCAGCGGCAGCA+AGG | - | chr8.1:43187237-43187256 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 43186899 | 43188210 | 43186899 | ID=MS.gene63114 |
chr8.1 | mRNA | 43186899 | 43188210 | 43186899 | ID=MS.gene63114.t1;Parent=MS.gene63114 |
chr8.1 | exon | 43186899 | 43187344 | 43186899 | ID=MS.gene63114.t1.exon1;Parent=MS.gene63114.t1 |
chr8.1 | CDS | 43186899 | 43187344 | 43186899 | ID=cds.MS.gene63114.t1;Parent=MS.gene63114.t1 |
chr8.1 | exon | 43187424 | 43187847 | 43187424 | ID=MS.gene63114.t1.exon2;Parent=MS.gene63114.t1 |
chr8.1 | CDS | 43187424 | 43187847 | 43187424 | ID=cds.MS.gene63114.t1;Parent=MS.gene63114.t1 |
chr8.1 | exon | 43187923 | 43188210 | 43187923 | ID=MS.gene63114.t1.exon3;Parent=MS.gene63114.t1 |
chr8.1 | CDS | 43187923 | 43188210 | 43187923 | ID=cds.MS.gene63114.t1;Parent=MS.gene63114.t1 |
Gene Sequence |
Protein sequence |