Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64985.t1 | RHN60394.1 | 52.4 | 477 | 162 | 10 | 5 | 420 | 7 | 479 | 1.70E-114 | 422.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64985.t1 | Q8H1R7 | 28.2 | 432 | 261 | 13 | 19 | 415 | 2 | 419 | 2.6e-23 | 111.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64985.t1 | A0A392M1I8 | 54.8 | 454 | 146 | 8 | 19 | 420 | 18 | 464 | 5.3e-118 | 434.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64985.t1 | MTR_8g058965 | 50.218 | 458 | 177 | 8 | 12 | 419 | 4 | 460 | 5.48e-135 | 395 |
MS.gene64985.t1 | MTR_8g469020 | 49.451 | 455 | 174 | 7 | 18 | 420 | 6 | 456 | 8.08e-132 | 387 |
MS.gene64985.t1 | MTR_8g070950 | 49.567 | 462 | 168 | 12 | 1 | 420 | 1 | 439 | 1.17e-121 | 360 |
MS.gene64985.t1 | MTR_8g062010 | 47.566 | 452 | 172 | 9 | 13 | 419 | 3 | 434 | 5.24e-120 | 356 |
MS.gene64985.t1 | MTR_8g062310 | 48.359 | 457 | 171 | 12 | 1 | 420 | 5 | 433 | 1.68e-116 | 347 |
MS.gene64985.t1 | MTR_8g062080 | 46.667 | 465 | 178 | 14 | 4 | 419 | 6 | 449 | 1.07e-115 | 345 |
MS.gene64985.t1 | MTR_4g050250 | 47.847 | 418 | 153 | 10 | 5 | 361 | 7 | 420 | 1.14e-112 | 337 |
MS.gene64985.t1 | MTR_8g062300 | 43.093 | 485 | 179 | 16 | 11 | 419 | 18 | 481 | 4.10e-101 | 309 |
MS.gene64985.t1 | MTR_8g468810 | 38.703 | 478 | 215 | 16 | 1 | 415 | 1 | 463 | 1.83e-82 | 261 |
MS.gene64985.t1 | MTR_8g058970 | 37.060 | 483 | 230 | 12 | 1 | 415 | 1 | 477 | 7.75e-80 | 254 |
MS.gene64985.t1 | MTR_2g083840 | 40.263 | 457 | 217 | 14 | 6 | 415 | 10 | 457 | 9.68e-79 | 251 |
MS.gene64985.t1 | MTR_8g467790 | 42.819 | 376 | 180 | 14 | 19 | 375 | 148 | 507 | 3.64e-73 | 238 |
MS.gene64985.t1 | MTR_8g014260 | 37.391 | 460 | 234 | 15 | 1 | 415 | 1 | 451 | 3.24e-71 | 231 |
MS.gene64985.t1 | MTR_8g062270 | 37.694 | 451 | 219 | 14 | 16 | 414 | 13 | 453 | 2.23e-68 | 224 |
MS.gene64985.t1 | MTR_4g032730 | 36.326 | 479 | 224 | 16 | 4 | 414 | 1 | 466 | 2.39e-68 | 224 |
MS.gene64985.t1 | MTR_8g014160 | 37.441 | 422 | 218 | 10 | 11 | 415 | 33 | 425 | 1.33e-66 | 218 |
MS.gene64985.t1 | MTR_8g468760 | 38.837 | 430 | 223 | 15 | 12 | 414 | 2 | 418 | 2.32e-66 | 218 |
MS.gene64985.t1 | MTR_8g468840 | 37.387 | 444 | 220 | 11 | 19 | 413 | 14 | 448 | 2.32e-65 | 216 |
MS.gene64985.t1 | MTR_8g467800 | 36.864 | 472 | 226 | 17 | 5 | 420 | 3 | 458 | 8.77e-65 | 214 |
MS.gene64985.t1 | MTR_5g092960 | 35.232 | 474 | 230 | 15 | 1 | 414 | 5 | 461 | 7.21e-64 | 212 |
MS.gene64985.t1 | MTR_8g468810 | 42.444 | 311 | 136 | 12 | 1 | 284 | 1 | 295 | 1.39e-57 | 192 |
MS.gene64985.t1 | MTR_8g468810 | 42.444 | 311 | 136 | 12 | 1 | 284 | 1 | 295 | 1.89e-57 | 192 |
MS.gene64985.t1 | MTR_8g468810 | 42.308 | 312 | 137 | 12 | 1 | 285 | 1 | 296 | 2.96e-57 | 192 |
MS.gene64985.t1 | MTR_8g468810 | 38.501 | 387 | 160 | 16 | 1 | 325 | 1 | 371 | 7.87e-57 | 191 |
MS.gene64985.t1 | MTR_8g077460 | 35.952 | 420 | 208 | 16 | 11 | 415 | 2 | 375 | 3.66e-56 | 189 |
MS.gene64985.t1 | MTR_8g445780 | 35.980 | 403 | 210 | 12 | 1 | 368 | 1 | 390 | 5.06e-56 | 190 |
MS.gene64985.t1 | MTR_2g086020 | 69.912 | 113 | 34 | 0 | 308 | 420 | 208 | 320 | 4.67e-47 | 164 |
MS.gene64985.t1 | MTR_2g086020 | 48.092 | 131 | 52 | 6 | 45 | 167 | 2 | 124 | 8.36e-22 | 95.9 |
MS.gene64985.t1 | MTR_5g092960 | 33.858 | 381 | 182 | 13 | 1 | 325 | 5 | 371 | 2.73e-40 | 148 |
MS.gene64985.t1 | MTR_8g467800 | 39.145 | 304 | 152 | 11 | 5 | 288 | 3 | 293 | 8.28e-40 | 145 |
MS.gene64985.t1 | MTR_5g021550 | 47.273 | 165 | 75 | 6 | 1 | 156 | 1 | 162 | 5.47e-36 | 130 |
MS.gene64985.t1 | MTR_8g014210 | 37.131 | 237 | 112 | 5 | 210 | 415 | 1 | 231 | 3.65e-32 | 122 |
MS.gene64985.t1 | MTR_7g032380 | 28.362 | 409 | 218 | 16 | 19 | 415 | 11 | 356 | 6.18e-32 | 124 |
MS.gene64985.t1 | MTR_1g041245 | 27.635 | 427 | 228 | 14 | 19 | 415 | 11 | 386 | 8.99e-32 | 125 |
MS.gene64985.t1 | MTR_8g014290 | 42.667 | 150 | 74 | 3 | 19 | 156 | 10 | 159 | 4.86e-29 | 111 |
MS.gene64985.t1 | MTR_4g024710 | 33.463 | 257 | 135 | 8 | 190 | 415 | 96 | 347 | 3.49e-27 | 111 |
MS.gene64985.t1 | MTR_7g056433 | 27.990 | 418 | 240 | 15 | 19 | 415 | 12 | 389 | 1.02e-26 | 110 |
MS.gene64985.t1 | MTR_7g033915 | 25.926 | 432 | 210 | 14 | 17 | 414 | 9 | 364 | 2.37e-26 | 109 |
MS.gene64985.t1 | MTR_5g008950 | 26.794 | 418 | 234 | 15 | 21 | 417 | 1 | 367 | 6.09e-26 | 108 |
MS.gene64985.t1 | MTR_2g036470 | 27.400 | 427 | 250 | 14 | 11 | 414 | 6 | 395 | 2.07e-25 | 107 |
MS.gene64985.t1 | MTR_7g034115 | 27.723 | 404 | 238 | 14 | 19 | 407 | 11 | 375 | 4.42e-25 | 106 |
MS.gene64985.t1 | MTR_3g099800 | 59.770 | 87 | 34 | 1 | 327 | 412 | 19 | 105 | 7.85e-25 | 98.2 |
MS.gene64985.t1 | MTR_4g024720 | 38.333 | 180 | 85 | 8 | 1 | 157 | 1 | 177 | 1.50e-24 | 100 |
MS.gene64985.t1 | MTR_7g026500 | 26.887 | 424 | 251 | 12 | 13 | 414 | 8 | 394 | 1.50e-24 | 104 |
MS.gene64985.t1 | MTR_3g023630 | 27.094 | 406 | 253 | 14 | 16 | 415 | 5 | 373 | 6.17e-24 | 102 |
MS.gene64985.t1 | MTR_7g032370 | 27.206 | 408 | 217 | 15 | 31 | 415 | 2 | 352 | 8.65e-24 | 102 |
MS.gene64985.t1 | MTR_6g022500 | 27.187 | 423 | 249 | 15 | 12 | 415 | 94 | 476 | 1.89e-23 | 102 |
MS.gene64985.t1 | MTR_1g108820 | 28.019 | 414 | 252 | 16 | 13 | 412 | 2 | 383 | 1.15e-22 | 99.4 |
MS.gene64985.t1 | MTR_2g007450 | 27.876 | 452 | 252 | 21 | 6 | 415 | 2 | 421 | 1.32e-22 | 99.4 |
MS.gene64985.t1 | MTR_7g098510 | 26.107 | 429 | 258 | 14 | 5 | 415 | 4 | 391 | 3.13e-22 | 98.2 |
MS.gene64985.t1 | MTR_3g108150 | 28.010 | 407 | 249 | 17 | 19 | 414 | 13 | 386 | 5.69e-22 | 97.4 |
MS.gene64985.t1 | MTR_5g073420 | 26.371 | 383 | 228 | 16 | 17 | 387 | 9 | 349 | 1.70e-21 | 95.9 |
MS.gene64985.t1 | MTR_7g033990 | 28.087 | 413 | 229 | 15 | 19 | 409 | 11 | 377 | 3.99e-21 | 95.1 |
MS.gene64985.t1 | MTR_7g056430 | 26.150 | 413 | 221 | 14 | 19 | 409 | 9 | 359 | 6.70e-21 | 95.9 |
MS.gene64985.t1 | MTR_7g056420 | 26.150 | 413 | 221 | 14 | 19 | 409 | 9 | 359 | 6.89e-21 | 95.9 |
MS.gene64985.t1 | MTR_6g040270 | 26.905 | 420 | 228 | 18 | 21 | 412 | 10 | 378 | 1.20e-20 | 93.2 |
MS.gene64985.t1 | MTR_5g045170 | 25.571 | 438 | 255 | 16 | 10 | 419 | 2 | 396 | 3.25e-20 | 92.4 |
MS.gene64985.t1 | MTR_7g088260 | 27.358 | 424 | 233 | 16 | 17 | 415 | 89 | 462 | 9.79e-20 | 91.3 |
MS.gene64985.t1 | MTR_1g066830 | 26.859 | 417 | 246 | 17 | 19 | 414 | 8 | 386 | 1.33e-19 | 90.5 |
MS.gene64985.t1 | MTR_7g075820 | 25.175 | 429 | 245 | 15 | 19 | 413 | 6 | 392 | 1.64e-19 | 90.1 |
MS.gene64985.t1 | MTR_5g008920 | 25.587 | 426 | 222 | 13 | 24 | 415 | 17 | 381 | 3.40e-19 | 89.0 |
MS.gene64985.t1 | MTR_1089s0010 | 24.424 | 434 | 241 | 19 | 13 | 415 | 2 | 379 | 3.45e-19 | 89.0 |
MS.gene64985.t1 | MTR_4g098590 | 26.110 | 383 | 233 | 11 | 21 | 382 | 1 | 354 | 8.69e-19 | 87.8 |
MS.gene64985.t1 | MTR_5g058100 | 25.735 | 408 | 258 | 12 | 19 | 414 | 9 | 383 | 1.19e-18 | 87.4 |
MS.gene64985.t1 | MTR_5g080710 | 26.047 | 430 | 261 | 16 | 19 | 407 | 33 | 446 | 1.38e-18 | 87.8 |
MS.gene64985.t1 | MTR_3g036250 | 25.862 | 406 | 244 | 13 | 18 | 412 | 4 | 363 | 1.41e-18 | 87.0 |
MS.gene64985.t1 | MTR_6g044560 | 26.222 | 450 | 234 | 21 | 10 | 415 | 169 | 564 | 3.75e-18 | 87.0 |
MS.gene64985.t1 | MTR_8g085430 | 32.487 | 197 | 118 | 7 | 15 | 201 | 7 | 198 | 4.20e-18 | 85.1 |
MS.gene64985.t1 | MTR_4g024745 | 30.833 | 240 | 130 | 9 | 190 | 398 | 50 | 284 | 1.63e-17 | 82.8 |
MS.gene64985.t1 | MTR_3g082890 | 26.730 | 419 | 254 | 15 | 19 | 415 | 97 | 484 | 2.17e-17 | 84.3 |
MS.gene64985.t1 | MTR_1g085120 | 32.812 | 192 | 120 | 6 | 15 | 202 | 175 | 361 | 3.15e-17 | 84.0 |
MS.gene64985.t1 | MTR_1g085120 | 32.812 | 192 | 120 | 6 | 15 | 202 | 163 | 349 | 3.62e-17 | 84.0 |
MS.gene64985.t1 | MTR_1g085120 | 32.812 | 192 | 120 | 6 | 15 | 202 | 88 | 274 | 3.89e-17 | 83.6 |
MS.gene64985.t1 | MTR_6g044572 | 25.682 | 440 | 231 | 19 | 19 | 415 | 2 | 388 | 7.67e-17 | 82.0 |
MS.gene64985.t1 | MTR_6g045333 | 25.694 | 432 | 263 | 16 | 8 | 414 | 47 | 445 | 1.35e-16 | 81.6 |
MS.gene64985.t1 | MTR_8g014230 | 46.429 | 84 | 43 | 2 | 325 | 408 | 17 | 98 | 2.31e-16 | 74.7 |
MS.gene64985.t1 | MTR_3g040700 | 25.936 | 374 | 205 | 16 | 18 | 371 | 42 | 363 | 2.59e-16 | 80.9 |
MS.gene64985.t1 | MTR_2g007500 | 31.731 | 208 | 103 | 9 | 8 | 201 | 3 | 185 | 2.63e-16 | 80.1 |
MS.gene64985.t1 | MTR_3g107100 | 33.010 | 206 | 110 | 9 | 15 | 205 | 7 | 199 | 3.12e-16 | 80.5 |
MS.gene64985.t1 | MTR_3g105060 | 25.123 | 406 | 249 | 15 | 19 | 415 | 14 | 373 | 3.21e-16 | 80.1 |
MS.gene64985.t1 | MTR_3g071850 | 27.363 | 402 | 255 | 15 | 19 | 407 | 24 | 401 | 4.37e-16 | 80.9 |
MS.gene64985.t1 | MTR_7g033945 | 32.984 | 191 | 96 | 7 | 17 | 203 | 9 | 171 | 7.90e-16 | 75.5 |
MS.gene64985.t1 | MTR_7g055943 | 23.888 | 427 | 260 | 18 | 14 | 415 | 35 | 421 | 1.62e-15 | 78.6 |
MS.gene64985.t1 | MTR_7g115270 | 34.507 | 142 | 85 | 4 | 19 | 156 | 12 | 149 | 2.52e-15 | 77.8 |
MS.gene64985.t1 | MTR_2g005990 | 25.467 | 428 | 248 | 16 | 17 | 412 | 4 | 392 | 3.59e-15 | 77.0 |
MS.gene64985.t1 | MTR_3g107160 | 25.060 | 419 | 262 | 13 | 11 | 416 | 5 | 384 | 6.95e-15 | 76.3 |
MS.gene64985.t1 | MTR_6g011460 | 26.253 | 419 | 260 | 16 | 11 | 415 | 38 | 421 | 1.06e-14 | 75.9 |
MS.gene64985.t1 | MTR_2g082800 | 30.994 | 171 | 107 | 4 | 3 | 170 | 15 | 177 | 1.38e-14 | 75.5 |
MS.gene64985.t1 | MTR_7g056447 | 31.000 | 200 | 106 | 8 | 15 | 200 | 5 | 186 | 2.28e-14 | 73.6 |
MS.gene64985.t1 | MTR_7g033940 | 34.815 | 135 | 72 | 5 | 4 | 130 | 75 | 201 | 1.18e-13 | 70.5 |
MS.gene64985.t1 | MTR_5g087940 | 32.407 | 216 | 109 | 10 | 5 | 201 | 13 | 210 | 1.53e-13 | 72.4 |
MS.gene64985.t1 | MTR_3g107120 | 29.439 | 214 | 112 | 11 | 14 | 202 | 4 | 203 | 1.79e-13 | 72.0 |
MS.gene64985.t1 | MTR_7g034110 | 32.168 | 143 | 71 | 5 | 19 | 150 | 11 | 138 | 1.93e-13 | 71.6 |
MS.gene64985.t1 | MTR_4g093690 | 30.169 | 295 | 157 | 15 | 3 | 281 | 2 | 263 | 2.04e-13 | 70.5 |
MS.gene64985.t1 | MTR_2g020170 | 36.641 | 131 | 71 | 4 | 7 | 132 | 10 | 133 | 2.40e-13 | 67.4 |
MS.gene64985.t1 | MTR_2g082880 | 40.870 | 115 | 63 | 3 | 19 | 132 | 10 | 120 | 2.77e-13 | 71.6 |
MS.gene64985.t1 | MTR_4g024770 | 53.125 | 64 | 26 | 2 | 1 | 63 | 8 | 68 | 3.11e-13 | 65.1 |
MS.gene64985.t1 | MTR_6g022360 | 25.000 | 412 | 238 | 13 | 14 | 402 | 38 | 401 | 3.20e-13 | 71.2 |
MS.gene64985.t1 | MTR_2g082850 | 32.061 | 131 | 86 | 2 | 5 | 132 | 8 | 138 | 4.75e-13 | 70.5 |
MS.gene64985.t1 | MTR_3g026920 | 24.717 | 441 | 242 | 16 | 18 | 418 | 18 | 408 | 4.80e-13 | 70.9 |
MS.gene64985.t1 | MTR_2g099980 | 31.847 | 157 | 102 | 3 | 1 | 156 | 20 | 172 | 9.70e-13 | 70.1 |
MS.gene64985.t1 | MTR_5g083890 | 25.871 | 402 | 233 | 15 | 19 | 385 | 6 | 377 | 1.01e-12 | 70.1 |
MS.gene64985.t1 | MTR_2g072530 | 32.667 | 150 | 91 | 4 | 10 | 156 | 4 | 146 | 1.18e-12 | 69.7 |
MS.gene64985.t1 | MTR_2g008310 | 24.819 | 415 | 249 | 16 | 19 | 415 | 2 | 371 | 1.82e-12 | 68.9 |
MS.gene64985.t1 | MTR_3g023470 | 31.447 | 159 | 91 | 5 | 5 | 160 | 3 | 146 | 2.08e-12 | 68.6 |
MS.gene64985.t1 | MTR_4g039440 | 24.594 | 431 | 245 | 16 | 16 | 415 | 31 | 412 | 2.67e-12 | 68.6 |
MS.gene64985.t1 | MTR_4g092430 | 38.202 | 89 | 51 | 2 | 1 | 88 | 24 | 109 | 3.60e-12 | 68.2 |
MS.gene64985.t1 | MTR_3g048290 | 28.272 | 191 | 128 | 5 | 19 | 203 | 23 | 210 | 3.77e-12 | 68.2 |
MS.gene64985.t1 | MTR_4g092430 | 29.834 | 181 | 113 | 6 | 1 | 179 | 24 | 192 | 4.05e-12 | 68.2 |
MS.gene64985.t1 | MTR_2g007400 | 26.484 | 438 | 241 | 19 | 19 | 418 | 12 | 406 | 4.68e-12 | 67.8 |
MS.gene64985.t1 | MTR_5g060570 | 30.872 | 149 | 94 | 3 | 19 | 167 | 17 | 156 | 7.40e-12 | 65.9 |
MS.gene64985.t1 | MTR_7g034090 | 29.932 | 147 | 88 | 3 | 17 | 157 | 2 | 139 | 7.48e-12 | 67.0 |
MS.gene64985.t1 | MTR_1g067190 | 31.646 | 158 | 95 | 6 | 6 | 162 | 3 | 148 | 1.06e-11 | 66.2 |
MS.gene64985.t1 | MTR_7g084080 | 32.026 | 153 | 92 | 4 | 6 | 156 | 2 | 144 | 1.24e-11 | 65.5 |
MS.gene64985.t1 | MTR_4g134150 | 30.732 | 205 | 123 | 7 | 19 | 218 | 14 | 204 | 1.35e-11 | 64.3 |
MS.gene64985.t1 | MTR_7g021630 | 31.818 | 154 | 81 | 6 | 7 | 157 | 5 | 137 | 1.45e-11 | 65.9 |
MS.gene64985.t1 | MTR_3g109982 | 29.255 | 188 | 117 | 6 | 19 | 201 | 13 | 189 | 1.54e-11 | 66.6 |
MS.gene64985.t1 | MTR_7g021630 | 31.818 | 154 | 81 | 6 | 7 | 157 | 5 | 137 | 1.62e-11 | 65.9 |
MS.gene64985.t1 | MTR_4g050930 | 41.667 | 84 | 42 | 2 | 5 | 88 | 19 | 95 | 1.67e-11 | 65.9 |
MS.gene64985.t1 | MTR_5g061680 | 33.846 | 195 | 115 | 12 | 17 | 204 | 9 | 196 | 1.71e-11 | 65.5 |
MS.gene64985.t1 | MTR_3g110010 | 29.255 | 188 | 117 | 6 | 19 | 201 | 13 | 189 | 2.23e-11 | 66.2 |
MS.gene64985.t1 | MTR_4g050930 | 41.667 | 84 | 42 | 2 | 5 | 88 | 19 | 95 | 2.31e-11 | 65.9 |
MS.gene64985.t1 | MTR_4g056020 | 30.769 | 208 | 115 | 7 | 11 | 204 | 4 | 196 | 2.66e-11 | 65.5 |
MS.gene64985.t1 | MTR_4g092440 | 39.773 | 88 | 50 | 1 | 3 | 90 | 16 | 100 | 2.70e-11 | 65.5 |
MS.gene64985.t1 | MTR_8g014180 | 52.459 | 61 | 25 | 2 | 1 | 60 | 1 | 58 | 3.60e-11 | 58.9 |
MS.gene64985.t1 | MTR_3g115430 | 41.333 | 75 | 41 | 1 | 341 | 415 | 54 | 125 | 4.02e-11 | 60.5 |
MS.gene64985.t1 | MTR_4g092440 | 39.773 | 88 | 50 | 1 | 3 | 90 | 16 | 100 | 4.16e-11 | 65.1 |
MS.gene64985.t1 | MTR_1g108820 | 30.151 | 199 | 123 | 8 | 13 | 205 | 2 | 190 | 5.00e-11 | 64.3 |
MS.gene64985.t1 | MTR_3g082890 | 34.722 | 144 | 75 | 6 | 19 | 157 | 17 | 146 | 6.48e-11 | 64.3 |
MS.gene64985.t1 | MTR_8g066650 | 38.372 | 86 | 50 | 1 | 3 | 88 | 64 | 146 | 6.64e-11 | 64.3 |
MS.gene64985.t1 | MTR_7g007340 | 29.353 | 201 | 108 | 5 | 9 | 204 | 3 | 174 | 6.92e-11 | 63.9 |
MS.gene64985.t1 | MTR_5g044860 | 41.758 | 91 | 43 | 3 | 5 | 88 | 9 | 96 | 7.05e-11 | 64.3 |
MS.gene64985.t1 | MTR_5g044800 | 41.758 | 91 | 43 | 3 | 5 | 88 | 9 | 96 | 7.11e-11 | 64.3 |
MS.gene64985.t1 | MTR_3g099900 | 34.177 | 158 | 82 | 7 | 5 | 157 | 6 | 146 | 8.92e-11 | 63.5 |
MS.gene64985.t1 | MTR_2g082780 | 36.111 | 108 | 66 | 2 | 17 | 121 | 10 | 117 | 9.12e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64985.t1 | AT4G26340 | 28.702 | 439 | 250 | 18 | 19 | 415 | 2 | 419 | 1.57e-24 | 105 |
MS.gene64985.t1 | AT5G56420 | 26.207 | 435 | 265 | 14 | 19 | 415 | 6 | 422 | 1.19e-21 | 96.7 |
MS.gene64985.t1 | AT5G56420 | 26.207 | 435 | 265 | 14 | 19 | 415 | 6 | 422 | 1.19e-21 | 96.7 |
MS.gene64985.t1 | AT5G56420 | 26.207 | 435 | 265 | 14 | 19 | 415 | 6 | 422 | 1.19e-21 | 96.7 |
MS.gene64985.t1 | AT4G10400 | 27.700 | 426 | 259 | 14 | 19 | 414 | 2 | 408 | 2.29e-21 | 95.9 |
MS.gene64985.t1 | AT4G10400 | 27.700 | 426 | 259 | 14 | 19 | 414 | 2 | 408 | 2.29e-21 | 95.9 |
MS.gene64985.t1 | AT4G10400 | 27.700 | 426 | 259 | 14 | 19 | 414 | 2 | 408 | 2.29e-21 | 95.9 |
MS.gene64985.t1 | AT1G16930 | 33.166 | 199 | 121 | 5 | 13 | 207 | 9 | 199 | 4.35e-20 | 92.4 |
MS.gene64985.t1 | AT1G16930 | 33.166 | 199 | 121 | 5 | 13 | 207 | 9 | 199 | 4.35e-20 | 92.4 |
MS.gene64985.t1 | AT1G16930 | 33.166 | 199 | 121 | 5 | 13 | 207 | 9 | 199 | 4.35e-20 | 92.4 |
MS.gene64985.t1 | AT1G06630 | 28.413 | 271 | 164 | 7 | 19 | 271 | 12 | 270 | 5.25e-19 | 87.4 |
MS.gene64985.t1 | AT1G06630 | 28.413 | 271 | 164 | 7 | 19 | 271 | 12 | 270 | 7.21e-19 | 88.6 |
MS.gene64985.t1 | AT1G06630 | 28.413 | 271 | 164 | 7 | 19 | 271 | 12 | 270 | 7.21e-19 | 88.6 |
MS.gene64985.t1 | AT1G06630 | 28.413 | 271 | 164 | 7 | 19 | 271 | 12 | 270 | 7.21e-19 | 88.6 |
MS.gene64985.t1 | AT1G06630 | 28.413 | 271 | 164 | 7 | 19 | 271 | 12 | 270 | 7.21e-19 | 88.6 |
MS.gene64985.t1 | AT1G06630 | 28.413 | 271 | 164 | 7 | 19 | 271 | 12 | 270 | 8.75e-19 | 87.8 |
MS.gene64985.t1 | AT1G06630 | 28.413 | 271 | 164 | 7 | 19 | 271 | 12 | 270 | 8.75e-19 | 87.8 |
MS.gene64985.t1 | AT1G06630 | 28.413 | 271 | 164 | 7 | 19 | 271 | 21 | 279 | 9.25e-19 | 88.2 |
MS.gene64985.t1 | AT1G32375 | 27.252 | 444 | 253 | 16 | 19 | 415 | 2 | 422 | 1.42e-18 | 87.8 |
MS.gene64985.t1 | AT1G32375 | 27.252 | 444 | 253 | 16 | 19 | 415 | 2 | 422 | 1.42e-18 | 87.8 |
MS.gene64985.t1 | AT1G06630 | 27.239 | 268 | 171 | 6 | 19 | 271 | 12 | 270 | 2.00e-18 | 87.4 |
MS.gene64985.t1 | AT3G60040 | 29.021 | 286 | 166 | 9 | 19 | 276 | 13 | 289 | 6.19e-18 | 86.7 |
MS.gene64985.t1 | AT4G00160 | 27.578 | 446 | 267 | 15 | 17 | 419 | 14 | 446 | 6.76e-18 | 85.9 |
MS.gene64985.t1 | AT3G60040 | 29.021 | 286 | 166 | 9 | 19 | 276 | 233 | 509 | 1.56e-17 | 85.5 |
MS.gene64985.t1 | AT3G49150 | 33.846 | 195 | 112 | 8 | 19 | 203 | 16 | 203 | 1.65e-17 | 84.7 |
MS.gene64985.t1 | AT3G60040 | 29.021 | 286 | 166 | 9 | 19 | 276 | 232 | 508 | 1.66e-17 | 85.5 |
MS.gene64985.t1 | AT3G59190 | 32.317 | 164 | 93 | 6 | 15 | 168 | 8 | 163 | 1.73e-17 | 84.0 |
MS.gene64985.t1 | AT3G60040 | 29.021 | 286 | 166 | 9 | 19 | 276 | 230 | 506 | 1.95e-17 | 85.1 |
MS.gene64985.t1 | AT3G60040 | 29.021 | 286 | 166 | 9 | 19 | 276 | 232 | 508 | 1.96e-17 | 85.1 |
MS.gene64985.t1 | AT3G59240 | 32.323 | 198 | 108 | 6 | 19 | 201 | 8 | 194 | 2.19e-17 | 84.7 |
MS.gene64985.t1 | AT3G59190 | 32.317 | 164 | 93 | 6 | 15 | 168 | 8 | 163 | 2.41e-17 | 84.3 |
MS.gene64985.t1 | AT1G66310 | 25.000 | 464 | 271 | 17 | 1 | 412 | 1 | 439 | 2.91e-17 | 84.0 |
MS.gene64985.t1 | AT5G53635 | 27.074 | 458 | 238 | 21 | 20 | 414 | 1 | 425 | 3.78e-17 | 83.6 |
MS.gene64985.t1 | AT3G44060 | 25.404 | 433 | 273 | 15 | 21 | 413 | 1 | 423 | 3.94e-17 | 83.2 |
MS.gene64985.t1 | AT3G59200 | 34.010 | 197 | 106 | 8 | 19 | 201 | 7 | 193 | 4.18e-17 | 82.8 |
MS.gene64985.t1 | AT5G56380 | 25.164 | 457 | 263 | 15 | 19 | 415 | 2 | 439 | 5.45e-17 | 83.2 |
MS.gene64985.t1 | AT5G56380 | 25.164 | 457 | 263 | 15 | 19 | 415 | 2 | 439 | 5.45e-17 | 83.2 |
MS.gene64985.t1 | AT5G53840 | 25.951 | 447 | 267 | 18 | 11 | 412 | 10 | 437 | 8.55e-17 | 82.4 |
MS.gene64985.t1 | AT3G59200 | 34.010 | 197 | 106 | 8 | 19 | 201 | 7 | 193 | 1.10e-16 | 82.4 |
MS.gene64985.t1 | AT3G58920 | 31.754 | 211 | 104 | 8 | 19 | 204 | 2 | 197 | 1.36e-16 | 82.0 |
MS.gene64985.t1 | AT1G69630 | 31.707 | 205 | 118 | 7 | 7 | 203 | 10 | 200 | 1.89e-16 | 81.3 |
MS.gene64985.t1 | AT1G66290 | 24.675 | 462 | 272 | 19 | 5 | 412 | 11 | 450 | 2.57e-16 | 80.9 |
MS.gene64985.t1 | AT3G58930 | 32.512 | 203 | 113 | 6 | 19 | 203 | 2 | 198 | 4.51e-16 | 80.5 |
MS.gene64985.t1 | AT3G58930 | 32.512 | 203 | 113 | 6 | 19 | 203 | 2 | 198 | 4.51e-16 | 80.5 |
MS.gene64985.t1 | AT3G58930 | 32.512 | 203 | 113 | 6 | 19 | 203 | 2 | 198 | 4.51e-16 | 80.5 |
MS.gene64985.t1 | AT4G09920 | 32.447 | 188 | 119 | 5 | 19 | 203 | 2 | 184 | 7.19e-16 | 78.2 |
MS.gene64985.t1 | AT4G09920 | 32.447 | 188 | 119 | 5 | 19 | 203 | 2 | 184 | 7.19e-16 | 78.2 |
MS.gene64985.t1 | AT4G09920 | 32.447 | 188 | 119 | 5 | 19 | 203 | 2 | 184 | 7.19e-16 | 78.2 |
MS.gene64985.t1 | AT4G09920 | 32.447 | 188 | 119 | 5 | 19 | 203 | 2 | 184 | 7.46e-16 | 78.6 |
MS.gene64985.t1 | AT4G09920 | 32.447 | 188 | 119 | 5 | 19 | 203 | 2 | 184 | 7.46e-16 | 78.6 |
MS.gene64985.t1 | AT3G03040 | 31.863 | 204 | 108 | 7 | 19 | 203 | 2 | 193 | 7.52e-16 | 79.7 |
MS.gene64985.t1 | AT5G38570 | 25.481 | 416 | 254 | 15 | 19 | 417 | 2 | 378 | 9.04e-16 | 79.0 |
MS.gene64985.t1 | AT3G42770 | 26.450 | 431 | 259 | 14 | 21 | 407 | 1 | 417 | 1.19e-15 | 79.3 |
MS.gene64985.t1 | AT3G58940 | 33.171 | 205 | 110 | 8 | 19 | 203 | 2 | 199 | 1.86e-15 | 79.0 |
MS.gene64985.t1 | AT3G58940 | 33.171 | 205 | 110 | 8 | 19 | 203 | 2 | 199 | 1.86e-15 | 79.0 |
MS.gene64985.t1 | AT3G59230 | 33.831 | 201 | 108 | 6 | 19 | 201 | 12 | 205 | 2.76e-15 | 78.2 |
MS.gene64985.t1 | AT1G78760 | 24.161 | 447 | 283 | 16 | 11 | 412 | 5 | 440 | 3.07e-15 | 77.8 |
MS.gene64985.t1 | AT5G38396 | 30.180 | 222 | 131 | 5 | 19 | 223 | 2 | 216 | 6.36e-15 | 76.6 |
MS.gene64985.t1 | AT3G52680 | 26.846 | 447 | 267 | 16 | 17 | 419 | 19 | 449 | 7.54e-15 | 76.6 |
MS.gene64985.t1 | AT5G22720 | 29.787 | 188 | 120 | 5 | 19 | 201 | 23 | 203 | 1.44e-14 | 75.9 |
MS.gene64985.t1 | AT1G52650 | 29.268 | 246 | 153 | 7 | 19 | 252 | 2 | 238 | 1.76e-14 | 75.5 |
MS.gene64985.t1 | AT3G59210 | 34.146 | 205 | 99 | 9 | 19 | 203 | 7 | 195 | 1.77e-14 | 75.5 |
MS.gene64985.t1 | AT3G59210 | 34.146 | 205 | 99 | 9 | 19 | 203 | 7 | 195 | 1.77e-14 | 75.5 |
MS.gene64985.t1 | AT3G59210 | 34.146 | 205 | 99 | 9 | 19 | 203 | 7 | 195 | 1.77e-14 | 75.5 |
MS.gene64985.t1 | AT3G59210 | 34.146 | 205 | 99 | 9 | 19 | 203 | 7 | 195 | 1.77e-14 | 75.5 |
MS.gene64985.t1 | AT3G59210 | 34.146 | 205 | 99 | 9 | 19 | 203 | 7 | 195 | 1.77e-14 | 75.5 |
MS.gene64985.t1 | AT3G58900 | 31.707 | 205 | 104 | 9 | 19 | 203 | 2 | 190 | 2.96e-14 | 73.6 |
MS.gene64985.t1 | AT4G14096 | 31.250 | 192 | 114 | 7 | 19 | 201 | 8 | 190 | 2.99e-14 | 74.7 |
MS.gene64985.t1 | AT4G14096 | 31.250 | 192 | 114 | 7 | 19 | 201 | 8 | 190 | 2.99e-14 | 74.7 |
MS.gene64985.t1 | AT3G58900 | 31.707 | 205 | 104 | 9 | 19 | 203 | 2 | 190 | 4.60e-14 | 73.2 |
MS.gene64985.t1 | AT3G58900 | 31.707 | 205 | 104 | 9 | 19 | 203 | 2 | 190 | 4.60e-14 | 73.2 |
MS.gene64985.t1 | AT5G56440 | 35.106 | 188 | 110 | 6 | 19 | 201 | 2 | 182 | 4.93e-14 | 73.9 |
MS.gene64985.t1 | AT3G26922 | 31.937 | 191 | 116 | 7 | 19 | 204 | 14 | 195 | 5.01e-14 | 72.8 |
MS.gene64985.t1 | AT3G26922 | 31.937 | 191 | 116 | 7 | 19 | 204 | 14 | 195 | 5.01e-14 | 72.8 |
MS.gene64985.t1 | AT1G51370 | 24.169 | 451 | 270 | 16 | 6 | 410 | 6 | 430 | 5.29e-14 | 73.9 |
MS.gene64985.t1 | AT4G13985 | 27.358 | 212 | 142 | 6 | 1 | 203 | 1 | 209 | 5.57e-14 | 73.9 |
MS.gene64985.t1 | AT3G58900 | 31.707 | 205 | 104 | 9 | 19 | 203 | 2 | 190 | 6.60e-14 | 73.6 |
MS.gene64985.t1 | AT3G50710 | 25.740 | 439 | 271 | 18 | 19 | 415 | 2 | 427 | 6.86e-14 | 73.6 |
MS.gene64985.t1 | AT5G60610 | 27.723 | 404 | 227 | 16 | 19 | 379 | 2 | 383 | 1.22e-13 | 72.4 |
MS.gene64985.t1 | AT5G60610 | 27.723 | 404 | 227 | 16 | 19 | 379 | 2 | 383 | 1.22e-13 | 72.4 |
MS.gene64985.t1 | AT3G03030 | 33.987 | 153 | 82 | 4 | 19 | 161 | 2 | 145 | 1.61e-13 | 71.6 |
MS.gene64985.t1 | AT2G26860 | 26.173 | 405 | 242 | 12 | 19 | 379 | 2 | 393 | 2.01e-13 | 72.0 |
MS.gene64985.t1 | AT2G26860 | 26.173 | 405 | 242 | 12 | 19 | 379 | 2 | 393 | 2.01e-13 | 72.0 |
MS.gene64985.t1 | AT3G03030 | 31.188 | 202 | 113 | 6 | 19 | 203 | 2 | 194 | 2.64e-13 | 72.0 |
MS.gene64985.t1 | AT5G41830 | 29.952 | 207 | 110 | 10 | 19 | 201 | 13 | 208 | 3.12e-13 | 71.6 |
MS.gene64985.t1 | AT5G38590 | 25.412 | 425 | 249 | 14 | 19 | 400 | 2 | 401 | 4.23e-13 | 70.9 |
MS.gene64985.t1 | AT4G13960 | 33.846 | 195 | 107 | 7 | 19 | 201 | 2 | 186 | 4.52e-13 | 71.2 |
MS.gene64985.t1 | AT4G13960 | 33.846 | 195 | 107 | 7 | 19 | 201 | 2 | 186 | 4.52e-13 | 71.2 |
MS.gene64985.t1 | AT5G41840 | 29.187 | 209 | 110 | 9 | 19 | 201 | 14 | 210 | 7.47e-13 | 70.5 |
MS.gene64985.t1 | AT4G13965 | 26.157 | 432 | 264 | 17 | 17 | 412 | 8 | 420 | 8.72e-13 | 70.1 |
MS.gene64985.t1 | AT3G59170 | 30.374 | 214 | 115 | 7 | 19 | 201 | 7 | 217 | 1.06e-12 | 70.1 |
MS.gene64985.t1 | AT5G38392 | 30.846 | 201 | 113 | 7 | 19 | 201 | 2 | 194 | 1.14e-12 | 67.4 |
MS.gene64985.t1 | AT3G58980 | 31.818 | 198 | 112 | 6 | 19 | 204 | 2 | 188 | 1.65e-12 | 69.7 |
MS.gene64985.t1 | AT2G42730 | 28.571 | 196 | 128 | 4 | 16 | 201 | 2 | 195 | 1.70e-12 | 69.3 |
MS.gene64985.t1 | AT3G54910 | 26.276 | 392 | 213 | 15 | 70 | 415 | 12 | 373 | 1.81e-12 | 68.9 |
MS.gene64985.t1 | AT3G54910 | 26.276 | 392 | 213 | 15 | 70 | 415 | 12 | 373 | 1.81e-12 | 68.9 |
MS.gene64985.t1 | AT3G54910 | 26.276 | 392 | 213 | 15 | 70 | 415 | 12 | 373 | 1.81e-12 | 68.9 |
MS.gene64985.t1 | AT5G38390 | 31.019 | 216 | 131 | 7 | 19 | 229 | 2 | 204 | 1.89e-12 | 69.3 |
MS.gene64985.t1 | AT4G00320 | 29.612 | 206 | 120 | 8 | 15 | 201 | 9 | 208 | 2.05e-12 | 69.3 |
MS.gene64985.t1 | AT1G55030 | 26.536 | 407 | 247 | 14 | 8 | 378 | 5 | 395 | 2.13e-12 | 68.9 |
MS.gene64985.t1 | AT3G59150 | 29.268 | 246 | 136 | 11 | 3 | 235 | 2 | 222 | 2.24e-12 | 68.9 |
MS.gene64985.t1 | AT2G26030 | 22.687 | 454 | 277 | 15 | 19 | 412 | 4 | 443 | 2.96e-12 | 68.6 |
MS.gene64985.t1 | AT2G26030 | 23.128 | 454 | 270 | 16 | 19 | 412 | 4 | 438 | 3.46e-12 | 68.2 |
MS.gene64985.t1 | AT2G26030 | 23.128 | 454 | 270 | 16 | 19 | 412 | 4 | 438 | 3.46e-12 | 68.2 |
MS.gene64985.t1 | AT1G66300 | 27.338 | 278 | 166 | 11 | 13 | 271 | 21 | 281 | 3.82e-12 | 68.2 |
MS.gene64985.t1 | AT3G59000 | 36.066 | 122 | 66 | 2 | 19 | 132 | 2 | 119 | 8.08e-12 | 66.6 |
MS.gene64985.t1 | AT1G64540 | 29.682 | 283 | 161 | 14 | 16 | 282 | 2 | 262 | 9.80e-12 | 67.0 |
MS.gene64985.t1 | AT1G64540 | 29.682 | 283 | 161 | 14 | 16 | 282 | 2 | 262 | 9.80e-12 | 67.0 |
MS.gene64985.t1 | AT3G59000 | 36.066 | 122 | 66 | 2 | 19 | 132 | 2 | 119 | 1.23e-11 | 66.6 |
MS.gene64985.t1 | AT3G58880 | 30.542 | 203 | 112 | 8 | 18 | 203 | 2 | 192 | 1.31e-11 | 66.6 |
MS.gene64985.t1 | AT4G15060 | 27.147 | 361 | 201 | 14 | 19 | 352 | 172 | 497 | 1.44e-11 | 66.6 |
MS.gene64985.t1 | AT1G55030 | 26.650 | 394 | 240 | 13 | 18 | 378 | 8 | 385 | 1.48e-11 | 66.2 |
MS.gene64985.t1 | AT3G52680 | 29.680 | 219 | 140 | 7 | 17 | 228 | 19 | 230 | 1.51e-11 | 65.9 |
MS.gene64985.t1 | AT1G78750 | 26.389 | 216 | 130 | 6 | 5 | 203 | 4 | 207 | 1.56e-11 | 66.2 |
MS.gene64985.t1 | AT1G78750 | 26.389 | 216 | 130 | 6 | 5 | 203 | 4 | 207 | 1.56e-11 | 66.2 |
MS.gene64985.t1 | AT3G44810 | 29.596 | 223 | 130 | 7 | 17 | 223 | 5 | 216 | 2.89e-11 | 65.5 |
MS.gene64985.t1 | AT4G14103 | 29.091 | 275 | 163 | 12 | 19 | 275 | 8 | 268 | 3.56e-11 | 65.1 |
MS.gene64985.t1 | AT4G14103 | 29.091 | 275 | 163 | 12 | 19 | 275 | 8 | 268 | 3.65e-11 | 64.7 |
MS.gene64985.t1 | AT4G14103 | 29.091 | 275 | 163 | 12 | 19 | 275 | 8 | 268 | 3.65e-11 | 64.7 |
MS.gene64985.t1 | AT4G27050 | 30.435 | 207 | 117 | 8 | 18 | 203 | 3 | 203 | 3.72e-11 | 65.1 |
MS.gene64985.t1 | AT4G27050 | 30.435 | 207 | 117 | 8 | 18 | 203 | 3 | 203 | 3.72e-11 | 65.1 |
MS.gene64985.t1 | AT4G27050 | 30.435 | 207 | 117 | 8 | 18 | 203 | 3 | 203 | 3.72e-11 | 65.1 |
MS.gene64985.t1 | AT4G27050 | 30.435 | 207 | 117 | 8 | 18 | 203 | 3 | 203 | 3.72e-11 | 65.1 |
MS.gene64985.t1 | AT4G27050 | 30.435 | 207 | 117 | 8 | 18 | 203 | 3 | 203 | 3.72e-11 | 65.1 |
MS.gene64985.t1 | AT3G58950 | 34.091 | 132 | 76 | 4 | 19 | 145 | 2 | 127 | 4.41e-11 | 64.7 |
MS.gene64985.t1 | AT5G18770 | 41.758 | 91 | 50 | 2 | 9 | 98 | 14 | 102 | 4.43e-11 | 65.1 |
MS.gene64985.t1 | AT5G18770 | 41.758 | 91 | 50 | 2 | 9 | 98 | 14 | 102 | 4.72e-11 | 64.3 |
MS.gene64985.t1 | AT3G59160 | 28.571 | 231 | 124 | 9 | 5 | 204 | 4 | 224 | 6.61e-11 | 64.3 |
MS.gene64985.t1 | AT1G51370 | 31.847 | 157 | 95 | 4 | 1 | 157 | 1 | 145 | 9.56e-11 | 63.5 |
Find 113 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTGTTGAATTTCAACTTCT+TGG | 0.196663 | 8.4:-39561674 | None:intergenic |
AAGAAGGGAGGATCGGATTT+GGG | 0.245303 | 8.4:-39559945 | None:intergenic |
GAAGAAGGGAGGATCGGATT+TGG | 0.253719 | 8.4:-39559946 | None:intergenic |
AGGTGGGATTCAAGACATTT+AGG | 0.296428 | 8.4:-39562330 | None:intergenic |
AATGATGCCTAATGTGGTTT+TGG | 0.317001 | 8.4:-39561770 | None:intergenic |
TTCAAATAGATTCCAATGAT+TGG | 0.333130 | 8.4:+39561719 | MS.gene64985:CDS |
AGGAACTTTGGTCAGAAGTC+TGG | 0.340273 | 8.4:-39561638 | None:intergenic |
TCAGACATTGCCTTTCTCTC+TGG | 0.356495 | 8.4:+39561577 | MS.gene64985:CDS |
ACGAGTAGTCGTCGTCGAAT+TGG | 0.361687 | 8.4:-39559714 | None:intergenic |
GATCGGATTTGGGGTATCAT+AGG | 0.363278 | 8.4:-39559935 | None:intergenic |
CTCGCAGATGGCGCAACCTC+TGG | 0.384466 | 8.4:+39559674 | MS.gene64985:CDS |
CGACATGATGAGTAATTTAC+CGG | 0.394092 | 8.4:+39559585 | MS.gene64985:CDS |
CCACGTGTTGATGCAGTTGC+TGG | 0.395001 | 8.4:-39559857 | None:intergenic |
ACGTGGATCGCTGCCGCCAT+TGG | 0.396421 | 8.4:+39559874 | MS.gene64985:CDS |
GAAACTCGACATATGTGTTA+TGG | 0.413704 | 8.4:+39561552 | MS.gene64985:CDS |
CACATCATCAAGCCAATCAT+TGG | 0.414146 | 8.4:-39561731 | None:intergenic |
CTCACCTACATTCACATAGA+AGG | 0.421474 | 8.4:+39562351 | MS.gene64985:CDS |
CGTGGATCGCTGCCGCCATT+GGG | 0.421791 | 8.4:+39559875 | MS.gene64985:CDS |
CTGTAGATATAATTCATTAC+CGG | 0.423113 | 8.4:-39561893 | None:intergenic |
ATATGCAGAGTTTCGAGAAC+GGG | 0.430137 | 8.4:-39561604 | None:intergenic |
GATGCAGATGTGTCTCCTTA+AGG | 0.433765 | 8.4:+39562549 | MS.gene64985:CDS |
ATGTGGCAAACTACAGATTC+CGG | 0.435666 | 8.4:-39559604 | None:intergenic |
AACGGGGCAGCCAGAGAGAA+AGG | 0.437002 | 8.4:-39561587 | None:intergenic |
CGGGACCTTGGTAGCGGAAG+CGG | 0.448312 | 8.4:-39561873 | None:intergenic |
TGGGCCCCACCTTCAAGAAC+TGG | 0.453700 | 8.4:+39559894 | MS.gene64985:CDS |
TCAGCTCTTCTTCAAATCCT+TGG | 0.457103 | 8.4:-39562377 | None:intergenic |
AAAACCACATTAGGCATCAT+TGG | 0.457220 | 8.4:+39561772 | MS.gene64985:CDS |
ATCGGATTTGGGGTATCATA+GGG | 0.459525 | 8.4:-39559934 | None:intergenic |
GGAACTTTGGTCAGAAGTCT+GGG | 0.462258 | 8.4:-39561637 | None:intergenic |
CAACCTCTGGAAGCATCGTC+AGG | 0.466091 | 8.4:+39559687 | MS.gene64985:CDS |
TTCTTGAAGGTGGGGCCCAA+TGG | 0.466618 | 8.4:-39559890 | None:intergenic |
TAGAGCTGGTGTTGAGGCGT+GGG | 0.474099 | 8.4:+39560988 | MS.gene64985:intron |
AGAAGGGAGGATCGGATTTG+GGG | 0.474795 | 8.4:-39559944 | None:intergenic |
GCTGTGTCATTCAACAGAAA+TGG | 0.475244 | 8.4:+39561915 | MS.gene64985:CDS |
GTGCAATTCAAGAGGGAAGA+AGG | 0.476286 | 8.4:-39559961 | None:intergenic |
TTCTTGGAGGAAGGTGTCAC+AGG | 0.476829 | 8.4:-39561658 | None:intergenic |
ACAAGTACCGTTCTCTCAAA+AGG | 0.477304 | 8.4:+39562481 | MS.gene64985:CDS |
GGAAGGTGTCACAGGAACTT+TGG | 0.478572 | 8.4:-39561650 | None:intergenic |
CGAGTCTTGTTTCTCGCAGA+TGG | 0.482951 | 8.4:+39559662 | MS.gene64985:CDS |
TTCGAATGTCACGGGATGTA+CGG | 0.483799 | 8.4:-39559792 | None:intergenic |
TGGTAGTGAGCTTAGTGCCT+TGG | 0.485394 | 8.4:+39561027 | MS.gene64985:CDS |
GAGATCCAGTTCTTGAAGGT+GGG | 0.489143 | 8.4:-39559899 | None:intergenic |
TCAACAATGGAAATTTCTCA+TGG | 0.492414 | 8.4:+39561689 | MS.gene64985:CDS |
TGGGTATGCCAGGATGGGAT+TGG | 0.499154 | 8.4:+39561007 | MS.gene64985:CDS |
GTTGAATTTCAACTTCTTGG+AGG | 0.501300 | 8.4:-39561671 | None:intergenic |
GAGGCGTGGGTATGCCAGGA+TGG | 0.505902 | 8.4:+39561001 | MS.gene64985:CDS |
TGGCAAGTGACAGAGCCCTT+TGG | 0.506778 | 8.4:-39562516 | None:intergenic |
GGATCAGCCAAAACCACATT+AGG | 0.516231 | 8.4:+39561763 | MS.gene64985:CDS |
TGCAGCTCACATGCTCCTAC+AGG | 0.517644 | 8.4:-39562294 | None:intergenic |
AATTTCAACTTCTTGGAGGA+AGG | 0.518051 | 8.4:-39561667 | None:intergenic |
GCTTGATGATGTGTACAGTT+GGG | 0.519059 | 8.4:+39561741 | MS.gene64985:CDS |
GGCTTGATGATGTGTACAGT+TGG | 0.520652 | 8.4:+39561740 | MS.gene64985:CDS |
TGGAGAGGAATGATAGGATG+TGG | 0.529886 | 8.4:-39559621 | None:intergenic |
ATAATTCATTACCGGGACCT+TGG | 0.531008 | 8.4:-39561885 | None:intergenic |
TTGAAGGTGGGGCCCAATGG+CGG | 0.531993 | 8.4:-39559887 | None:intergenic |
TTAGAGCTGGTGTTGAGGCG+TGG | 0.532571 | 8.4:+39560987 | MS.gene64985:intron |
CGCTTCCGCTACCAAGGTCC+CGG | 0.534639 | 8.4:+39561874 | MS.gene64985:CDS |
TGTTGAGGCGTGGGTATGCC+AGG | 0.534997 | 8.4:+39560997 | MS.gene64985:CDS |
GCTCACTACCAATCCCATCC+TGG | 0.537471 | 8.4:-39561015 | None:intergenic |
TGTGGAGATCCAGTTCTTGA+AGG | 0.540425 | 8.4:-39559903 | None:intergenic |
ATTTGGGGTATCATAGGGGT+TGG | 0.540460 | 8.4:-39559929 | None:intergenic |
CATTACCGGGACCTTGGTAG+CGG | 0.540771 | 8.4:-39561879 | None:intergenic |
TATCATAGGGGTTGGCGATG+TGG | 0.542183 | 8.4:-39559921 | None:intergenic |
AGATCCAGTTCTTGAAGGTG+GGG | 0.546630 | 8.4:-39559898 | None:intergenic |
AAGGTTAACCCGTGTACCAA+AGG | 0.550537 | 8.4:+39562500 | MS.gene64985:CDS |
ATAGCGAAACGACGGAAACC+AGG | 0.554913 | 8.4:+39559541 | MS.gene64985:CDS |
GTATCCTTCTATGTGAATGT+AGG | 0.554964 | 8.4:-39562355 | None:intergenic |
GACAGAGCCCTTTGGTACAC+GGG | 0.555027 | 8.4:-39562508 | None:intergenic |
AGGCGTGGGTATGCCAGGAT+GGG | 0.558392 | 8.4:+39561002 | MS.gene64985:CDS |
AGGTTAACCCGTGTACCAAA+GGG | 0.564649 | 8.4:+39562501 | MS.gene64985:CDS |
TGACAGAGCCCTTTGGTACA+CGG | 0.565716 | 8.4:-39562509 | None:intergenic |
CTTGATGATGTGTACAGTTG+GGG | 0.572858 | 8.4:+39561742 | MS.gene64985:CDS |
TCACATGCTCCTACAGGTGA+TGG | 0.574219 | 8.4:-39562288 | None:intergenic |
GGAGATCCAGTTCTTGAAGG+TGG | 0.578422 | 8.4:-39559900 | None:intergenic |
GCACCAACCTCGTTTCACTC+AGG | 0.587261 | 8.4:+39559980 | MS.gene64985:CDS |
CGAAAGTTCCGTCTCCATTG+TGG | 0.587421 | 8.4:+39559811 | MS.gene64985:CDS |
CACGTGTTGATGCAGTTGCT+GGG | 0.589765 | 8.4:-39559856 | None:intergenic |
TGCAATTCAAGAGGGAAGAA+GGG | 0.594414 | 8.4:-39559960 | None:intergenic |
TATGTGAATGTAGGTGAGGT+GGG | 0.598340 | 8.4:-39562346 | None:intergenic |
AAGAGGGAAGAAGGGAGGAT+CGG | 0.598884 | 8.4:-39559952 | None:intergenic |
GACGGAACTTTCGAATGTCA+CGG | 0.599917 | 8.4:-39559801 | None:intergenic |
ACGGAACTTTCGAATGTCAC+GGG | 0.601922 | 8.4:-39559800 | None:intergenic |
CTCAACCGCTTCCGCTACCA+AGG | 0.603903 | 8.4:+39561868 | MS.gene64985:CDS |
CGAGGTTGGTGCAATTCAAG+AGG | 0.606867 | 8.4:-39559969 | None:intergenic |
ACATTATGCCACAATGGAGA+CGG | 0.608580 | 8.4:-39559819 | None:intergenic |
CATCTGCATCAAATTCAAGC+TGG | 0.612741 | 8.4:-39562536 | None:intergenic |
CTATGTGAATGTAGGTGAGG+TGG | 0.614094 | 8.4:-39562347 | None:intergenic |
AATATGCAGAGTTTCGAGAA+CGG | 0.614772 | 8.4:-39561605 | None:intergenic |
GAATGTCACGGGATGTACGG+AGG | 0.618589 | 8.4:-39559789 | None:intergenic |
TCACCTGAGTGAAACGAGGT+TGG | 0.624462 | 8.4:-39559983 | None:intergenic |
TCGGATTTGGGGTATCATAG+GGG | 0.628472 | 8.4:-39559933 | None:intergenic |
GTTGCCAATGATGCCTAATG+TGG | 0.628969 | 8.4:-39561776 | None:intergenic |
GTTCATACATTATGCCACAA+TGG | 0.629836 | 8.4:-39559825 | None:intergenic |
CGGTAAATTACTCATCATGT+CGG | 0.632793 | 8.4:-39559584 | None:intergenic |
AAGAAGTTGAAATTCAACAA+TGG | 0.632882 | 8.4:+39561676 | MS.gene64985:CDS |
AATGTCACGGGATGTACGGA+GGG | 0.633611 | 8.4:-39559788 | None:intergenic |
TAGGAAGAACCATCACCTGT+AGG | 0.643014 | 8.4:+39562279 | MS.gene64985:intron |
TGTAGATATAATTCATTACC+GGG | 0.645260 | 8.4:-39561892 | None:intergenic |
TCTCATACTTCAAATCGACA+AGG | 0.646252 | 8.4:+39562153 | MS.gene64985:CDS |
CGACAAATTCACTCTCACGT+TGG | 0.647538 | 8.4:-39561837 | None:intergenic |
CCAGCAACTGCATCAACACG+TGG | 0.647695 | 8.4:+39559857 | MS.gene64985:CDS |
CTTCTATGTGAATGTAGGTG+AGG | 0.658386 | 8.4:-39562350 | None:intergenic |
ACTACTCGTACGATTACGAA+AGG | 0.662506 | 8.4:+39559728 | MS.gene64985:CDS |
TATGCAGAGTTTCGAGAACG+GGG | 0.662560 | 8.4:-39561603 | None:intergenic |
AAACCTGACGATGCTTCCAG+AGG | 0.676435 | 8.4:-39559690 | None:intergenic |
ATTCACATAGAAGGATACCA+AGG | 0.682776 | 8.4:+39562360 | MS.gene64985:CDS |
TGGCGGAGATAGCGAAACGA+CGG | 0.684205 | 8.4:+39559533 | MS.gene64985:CDS |
GAACTTTGGTCAGAAGTCTG+GGG | 0.688258 | 8.4:-39561636 | None:intergenic |
CCTCTCCATTAAAACCGCTG+TGG | 0.689204 | 8.4:+39559636 | MS.gene64985:CDS |
GAGGTTGGTGCAATTCAAGA+GGG | 0.693328 | 8.4:-39559968 | None:intergenic |
AATTCAAGAGGGAAGAAGGG+AGG | 0.701014 | 8.4:-39559957 | None:intergenic |
AAGCTCACCTGAGTGAAACG+AGG | 0.709409 | 8.4:-39559987 | None:intergenic |
AACAAGACTCGTCGCCACAG+CGG | 0.767409 | 8.4:-39559650 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAATTCTTAAATACTATTTT+TGG | - | chr8.4:39561424-39561443 | None:intergenic | 10.0% |
!!! | AGTAGAATTTTTTTTTTAAT+CGG | - | chr8.4:39561163-39561182 | None:intergenic | 10.0% |
!!! | TATTTTTGTTGATATTTCAA+TGG | + | chr8.4:39562449-39562468 | MS.gene64985:CDS | 15.0% |
!!! | TTATTATGTAGAATTGATTT+TGG | + | chr8.4:39560086-39560105 | MS.gene64985:intron | 15.0% |
!! | AAAACAATTCTGATTAAAAG+TGG | + | chr8.4:39560112-39560131 | MS.gene64985:intron | 20.0% |
!! | AAGTAGAATCAATTCTTATA+TGG | + | chr8.4:39560209-39560228 | MS.gene64985:intron | 20.0% |
!! | AATTCTGGATTATTTATAAC+AGG | - | chr8.4:39562043-39562062 | None:intergenic | 20.0% |
!! | AGTAGAATCAATTCTTATAT+GGG | + | chr8.4:39560210-39560229 | MS.gene64985:intron | 20.0% |
!! | ATAGGAACAAAGTTAAATTA+AGG | - | chr8.4:39561371-39561390 | None:intergenic | 20.0% |
!! | ATTCTGGATTATTTATAACA+GGG | - | chr8.4:39562042-39562061 | None:intergenic | 20.0% |
! | AAAAAGAAACCACTTTCAAA+GGG | - | chr8.4:39560383-39560402 | None:intergenic | 25.0% |
! | AAGAAGTTGAAATTCAACAA+TGG | + | chr8.4:39561676-39561695 | MS.gene64985:CDS | 25.0% |
! | ACTTATCAAGTTTCATTCAA+TGG | + | chr8.4:39562183-39562202 | MS.gene64985:intron | 25.0% |
! | ATTGTTGAATTTCAACTTCT+TGG | - | chr8.4:39561677-39561696 | None:intergenic | 25.0% |
! | CTGTAGATATAATTCATTAC+CGG | - | chr8.4:39561896-39561915 | None:intergenic | 25.0% |
! | GTAGAATCAATTCTTATATG+GGG | + | chr8.4:39560211-39560230 | MS.gene64985:intron | 25.0% |
! | TAACTTTGTTCCTATGAAAA+TGG | + | chr8.4:39561376-39561395 | MS.gene64985:intron | 25.0% |
! | TAGAATCAATTCTTATATGG+GGG | + | chr8.4:39560212-39560231 | MS.gene64985:intron | 25.0% |
! | TATTTGACATGCTATCATTT+GGG | + | chr8.4:39560666-39560685 | MS.gene64985:intron | 25.0% |
! | TGTAGATATAATTCATTACC+GGG | - | chr8.4:39561895-39561914 | None:intergenic | 25.0% |
! | TTATTTGACATGCTATCATT+TGG | + | chr8.4:39560665-39560684 | MS.gene64985:intron | 25.0% |
! | TTCAAATAGATTCCAATGAT+TGG | + | chr8.4:39561719-39561738 | MS.gene64985:CDS | 25.0% |
! | TTCTGGATTATTTATAACAG+GGG | - | chr8.4:39562041-39562060 | None:intergenic | 25.0% |
!! | CTTCTTACATTGTATTTTCA+CGG | + | chr8.4:39560516-39560535 | MS.gene64985:intron | 25.0% |
!! | GCTGAATATATTTTGTTGAA+CGG | + | chr8.4:39562405-39562424 | MS.gene64985:CDS | 25.0% |
!!! | GATTTTTATATTGGAGTGTT+TGG | + | chr8.4:39560950-39560969 | MS.gene64985:intron | 25.0% |
!!! | TGGCTGTTTTTTACTATAAT+GGG | + | chr8.4:39560922-39560941 | MS.gene64985:intron | 25.0% |
!!! | TGGGGTATTGATTTTTATAT+TGG | + | chr8.4:39560941-39560960 | MS.gene64985:intron | 25.0% |
AAAAGAAACCACTTTCAAAG+GGG | - | chr8.4:39560382-39560401 | None:intergenic | 30.0% | |
ACAATGTAAGAAGAGATGTT+TGG | - | chr8.4:39560509-39560528 | None:intergenic | 30.0% | |
AGTTTCATTCAATGGATGTT+TGG | + | chr8.4:39562191-39562210 | MS.gene64985:intron | 30.0% | |
ATATGAGAACGAATTATTGC+CGG | + | chr8.4:39560735-39560754 | MS.gene64985:intron | 30.0% | |
CTATACTGTTTATGCATGTT+TGG | + | chr8.4:39560031-39560050 | MS.gene64985:intron | 30.0% | |
GAAAAAGAAACCACTTTCAA+AGG | - | chr8.4:39560384-39560403 | None:intergenic | 30.0% | |
GAATGAACTTTAGATGAAGT+AGG | - | chr8.4:39562072-39562091 | None:intergenic | 30.0% | |
GTTTATACTATGAGTAGAGT+TGG | + | chr8.4:39560812-39560831 | MS.gene64985:intron | 30.0% | |
TAACTAGATGTAATCTTGCT+AGG | + | chr8.4:39560418-39560437 | MS.gene64985:intron | 30.0% | |
TCAACAATGGAAATTTCTCA+TGG | + | chr8.4:39561689-39561708 | MS.gene64985:CDS | 30.0% | |
TGAAGATTCAAATTGAAGCA+GGG | - | chr8.4:39562097-39562116 | None:intergenic | 30.0% | |
! | AACACTAAATCAAAGTACCA+AGG | - | chr8.4:39561047-39561066 | None:intergenic | 30.0% |
! | AATTGTACCGGAATCAATTT+TGG | + | chr8.4:39561209-39561228 | MS.gene64985:intron | 30.0% |
! | ACAATTGATTCTGACATGTT+TGG | - | chr8.4:39561195-39561214 | None:intergenic | 30.0% |
! | TGAAAGTGGTTTCTTTTTCT+TGG | + | chr8.4:39560385-39560404 | MS.gene64985:intron | 30.0% |
! | TTTTAATGGAGAGGAATGAT+AGG | - | chr8.4:39559630-39559649 | None:intergenic | 30.0% |
!! | GAAATCTTGCTATTTGAAGT+TGG | + | chr8.4:39560288-39560307 | MS.gene64985:intron | 30.0% |
!! | TTTTATATTGGAGTGTTTGG+TGG | + | chr8.4:39560953-39560972 | MS.gene64985:intron | 30.0% |
!!! | GGCTGTTTTTTACTATAATG+GGG | + | chr8.4:39560923-39560942 | MS.gene64985:intron | 30.0% |
!!! | GTGGCTGTTTTTTACTATAA+TGG | + | chr8.4:39560921-39560940 | MS.gene64985:intron | 30.0% |
!!! | TATGATCTTGCCATTTTCAT+AGG | - | chr8.4:39561389-39561408 | None:intergenic | 30.0% |
AAAAAGAAGTGAATACACCC+AGG | - | chr8.4:39560900-39560919 | None:intergenic | 35.0% | |
AAAACCACATTAGGCATCAT+TGG | + | chr8.4:39561772-39561791 | MS.gene64985:CDS | 35.0% | |
AATATGCAGAGTTTCGAGAA+CGG | - | chr8.4:39561608-39561627 | None:intergenic | 35.0% | |
AATTTCAACTTCTTGGAGGA+AGG | - | chr8.4:39561670-39561689 | None:intergenic | 35.0% | |
ATGCTATCATTTGGGTGATT+TGG | + | chr8.4:39560674-39560693 | MS.gene64985:intron | 35.0% | |
ATTCACATAGAAGGATACCA+AGG | + | chr8.4:39562360-39562379 | MS.gene64985:CDS | 35.0% | |
CACAACATCACCATTATTTC+CGG | - | chr8.4:39560757-39560776 | None:intergenic | 35.0% | |
CATGTCAGAATCAATTGTAC+CGG | + | chr8.4:39561197-39561216 | MS.gene64985:intron | 35.0% | |
CGAATTATTGCCGGAAATAA+TGG | + | chr8.4:39560744-39560763 | MS.gene64985:intron | 35.0% | |
CGACATGATGAGTAATTTAC+CGG | + | chr8.4:39559585-39559604 | MS.gene64985:CDS | 35.0% | |
CGGTAAATTACTCATCATGT+CGG | - | chr8.4:39559587-39559606 | None:intergenic | 35.0% | |
CTGAAGATTCAAATTGAAGC+AGG | - | chr8.4:39562098-39562117 | None:intergenic | 35.0% | |
CTGCTTCAATTTGAATCTTC+AGG | + | chr8.4:39562096-39562115 | MS.gene64985:intron | 35.0% | |
GAAACTCGACATATGTGTTA+TGG | + | chr8.4:39561552-39561571 | MS.gene64985:CDS | 35.0% | |
GTACATACTACGTGTATGTT+TGG | - | chr8.4:39561252-39561271 | None:intergenic | 35.0% | |
GTATCCTTCTATGTGAATGT+AGG | - | chr8.4:39562358-39562377 | None:intergenic | 35.0% | |
GTTCATACATTATGCCACAA+TGG | - | chr8.4:39559828-39559847 | None:intergenic | 35.0% | |
GTTGAATTTCAACTTCTTGG+AGG | - | chr8.4:39561674-39561693 | None:intergenic | 35.0% | |
GTTTATGCATGTTTGGTTGT+CGG | + | chr8.4:39560038-39560057 | MS.gene64985:intron | 35.0% | |
TCTCATACTTCAAATCGACA+AGG | + | chr8.4:39562153-39562172 | MS.gene64985:CDS | 35.0% | |
TCTCATATTTCACCTCATTC+CGG | - | chr8.4:39560723-39560742 | None:intergenic | 35.0% | |
TCTTATATGGGGGAATATTC+CGG | + | chr8.4:39560222-39560241 | MS.gene64985:intron | 35.0% | |
TGAAGTAGGTTGCAAAATTC+TGG | - | chr8.4:39562058-39562077 | None:intergenic | 35.0% | |
TTGTACGTGATAACAAGTGA+TGG | - | chr8.4:39562001-39562020 | None:intergenic | 35.0% | |
! | AAATAATGGTGATGTTGTGG+CGG | + | chr8.4:39560758-39560777 | MS.gene64985:intron | 35.0% |
! | AATGATGCCTAATGTGGTTT+TGG | - | chr8.4:39561773-39561792 | None:intergenic | 35.0% |
! | ACATTGTATTTTCACGGCAA+AGG | + | chr8.4:39560522-39560541 | MS.gene64985:intron | 35.0% |
! | CATTGTATTTTCACGGCAAA+GGG | + | chr8.4:39560523-39560542 | MS.gene64985:intron | 35.0% |
! | CGAGGAATCACATTATTTTC+CGG | + | chr8.4:39560701-39560720 | MS.gene64985:intron | 35.0% |
! | TCACATTATTTTCCGGAATG+AGG | + | chr8.4:39560708-39560727 | MS.gene64985:intron | 35.0% |
! | TTCATTTTCCATCACTCAAG+TGG | + | chr8.4:39561527-39561546 | MS.gene64985:intron | 35.0% |
! | TTCTTTCCTTTTTGTGCTCT+GGG | + | chr8.4:39561066-39561085 | MS.gene64985:intron | 35.0% |
! | TTGCGGTAAAGGTTTTTGTT+TGG | + | chr8.4:39560853-39560872 | MS.gene64985:intron | 35.0% |
! | TTTCTTTCCTTTTTGTGCTC+TGG | + | chr8.4:39561065-39561084 | MS.gene64985:intron | 35.0% |
!! | AAAGGTTTTTGTTTGGCTAG+AGG | + | chr8.4:39560860-39560879 | MS.gene64985:intron | 35.0% |
!! | GTGTATTCACTTCTTTTTCG+TGG | + | chr8.4:39560902-39560921 | MS.gene64985:intron | 35.0% |
!! | GTTGGGAAAGTGTTATGAAA+TGG | + | chr8.4:39560545-39560564 | MS.gene64985:intron | 35.0% |
!!! | AGGGAGTTTTTGAGACTATT+TGG | + | chr8.4:39560346-39560365 | MS.gene64985:intron | 35.0% |
!!! | GGTTGTTTGTTTTTTAGAGC+TGG | + | chr8.4:39560974-39560993 | MS.gene64985:intron | 35.0% |
ACATTATGCCACAATGGAGA+CGG | - | chr8.4:39559822-39559841 | None:intergenic | 40.0% | |
ACTACTCGTACGATTACGAA+AGG | + | chr8.4:39559728-39559747 | MS.gene64985:CDS | 40.0% | |
ACTGAAAACATTACCACTCG+CGG | - | chr8.4:39561116-39561135 | None:intergenic | 40.0% | |
AGGATGAGATGTGGAAGAAA+AGG | + | chr8.4:39560326-39560345 | MS.gene64985:intron | 40.0% | |
AGGTGGGATTCAAGACATTT+AGG | - | chr8.4:39562333-39562352 | None:intergenic | 40.0% | |
ATAATTCATTACCGGGACCT+TGG | - | chr8.4:39561888-39561907 | None:intergenic | 40.0% | |
ATATGCAGAGTTTCGAGAAC+GGG | - | chr8.4:39561607-39561626 | None:intergenic | 40.0% | |
ATGTGGCAAACTACAGATTC+CGG | - | chr8.4:39559607-39559626 | None:intergenic | 40.0% | |
CACATCATCAAGCCAATCAT+TGG | - | chr8.4:39561734-39561753 | None:intergenic | 40.0% | |
CATCTGCATCAAATTCAAGC+TGG | - | chr8.4:39562539-39562558 | None:intergenic | 40.0% | |
CCAATGCACAAACAAATTCG+GGG | - | chr8.4:39560593-39560612 | None:intergenic | 40.0% | |
CCAGGCGATGAAAAAAACAA+TGG | + | chr8.4:39559559-39559578 | MS.gene64985:CDS | 40.0% | |
CCCAATGCACAAACAAATTC+GGG | - | chr8.4:39560594-39560613 | None:intergenic | 40.0% | |
CTCACCTACATTCACATAGA+AGG | + | chr8.4:39562351-39562370 | MS.gene64985:CDS | 40.0% | |
CTTCTATGTGAATGTAGGTG+AGG | - | chr8.4:39562353-39562372 | None:intergenic | 40.0% | |
GAGAAACAAGAGGATTCGTA+AGG | + | chr8.4:39560633-39560652 | MS.gene64985:intron | 40.0% | |
GCCCAATGCACAAACAAATT+CGG | - | chr8.4:39560595-39560614 | None:intergenic | 40.0% | |
GGATGAGATGTGGAAGAAAA+GGG | + | chr8.4:39560327-39560346 | MS.gene64985:intron | 40.0% | |
GTAATGAAGGGAGAAACAAG+AGG | + | chr8.4:39560623-39560642 | MS.gene64985:intron | 40.0% | |
TAGTCTATACATGCGAGTCA+TGG | + | chr8.4:39562240-39562259 | MS.gene64985:intron | 40.0% | |
TATGTGAATGTAGGTGAGGT+GGG | - | chr8.4:39562349-39562368 | None:intergenic | 40.0% | |
TCAGCTCTTCTTCAAATCCT+TGG | - | chr8.4:39562380-39562399 | None:intergenic | 40.0% | |
TCTACCACACAAAACACACA+AGG | - | chr8.4:39560473-39560492 | None:intergenic | 40.0% | |
TGCAATTCAAGAGGGAAGAA+GGG | - | chr8.4:39559963-39559982 | None:intergenic | 40.0% | |
TTGTTATCACGTACAAGCAG+TGG | + | chr8.4:39562005-39562024 | MS.gene64985:intron | 40.0% | |
! | AAGTAAAGCCCCTTTGAAAG+TGG | + | chr8.4:39560371-39560390 | MS.gene64985:intron | 40.0% |
! | ACAAGTACCGTTCTCTCAAA+AGG | + | chr8.4:39562481-39562500 | MS.gene64985:CDS | 40.0% |
! | AGAGGGACCAAAATTGATTC+CGG | - | chr8.4:39561219-39561238 | None:intergenic | 40.0% |
! | ATCGGATTTGGGGTATCATA+GGG | - | chr8.4:39559937-39559956 | None:intergenic | 40.0% |
! | ATGTTTGGTTCCACTTCTAG+AGG | - | chr8.4:39561237-39561256 | None:intergenic | 40.0% |
! | CCCGAATTTGTTTGTGCATT+GGG | + | chr8.4:39560591-39560610 | MS.gene64985:intron | 40.0% |
! | CGGAAATAATGGTGATGTTG+TGG | + | chr8.4:39560755-39560774 | MS.gene64985:intron | 40.0% |
! | GCTGTGTCATTCAACAGAAA+TGG | + | chr8.4:39561915-39561934 | MS.gene64985:CDS | 40.0% |
! | GTGTGTTTTGTGTGGTAGAA+CGG | + | chr8.4:39560474-39560493 | MS.gene64985:intron | 40.0% |
! | TATTTTCACGGCAAAGGGTT+GGG | + | chr8.4:39560528-39560547 | MS.gene64985:intron | 40.0% |
! | TCTAAATGCTCCAGTCTTGT+CGG | + | chr8.4:39561472-39561491 | MS.gene64985:intron | 40.0% |
! | TCTACCTTGTGTGTTTTGTG+TGG | + | chr8.4:39560466-39560485 | MS.gene64985:intron | 40.0% |
! | TCTTTCCTTTTTGTGCTCTG+GGG | + | chr8.4:39561067-39561086 | MS.gene64985:intron | 40.0% |
! | TGTTTGGTTCCACTTCTAGA+GGG | - | chr8.4:39561236-39561255 | None:intergenic | 40.0% |
! | TTTGATTTCACCGACAAGAC+TGG | - | chr8.4:39561485-39561504 | None:intergenic | 40.0% |
!! | AATTTTGGTCCCTCTAGAAG+TGG | + | chr8.4:39561224-39561243 | MS.gene64985:intron | 40.0% |
!! | CTTGATGATGTGTACAGTTG+GGG | + | chr8.4:39561742-39561761 | MS.gene64985:CDS | 40.0% |
!! | GAAGTTGGTGAGTTTGATGT+TGG | + | chr8.4:39560303-39560322 | MS.gene64985:intron | 40.0% |
!! | GCTTGATGATGTGTACAGTT+GGG | + | chr8.4:39561741-39561760 | MS.gene64985:CDS | 40.0% |
!! | GGGTTAACCTTTTGAGAGAA+CGG | - | chr8.4:39562491-39562510 | None:intergenic | 40.0% |
!!! | CCATTGTTTTTTTCATCGCC+TGG | - | chr8.4:39559562-39559581 | None:intergenic | 40.0% |
!!! | GTTTTTTAGAGCTGGTGTTG+AGG | + | chr8.4:39560982-39561001 | MS.gene64985:intron | 40.0% |
AAATGCCCCAGAGCACAAAA+AGG | - | chr8.4:39561075-39561094 | None:intergenic | 45.0% | |
AAGAAGGGAGGATCGGATTT+GGG | - | chr8.4:39559948-39559967 | None:intergenic | 45.0% | |
AAGGTTAACCCGTGTACCAA+AGG | + | chr8.4:39562500-39562519 | MS.gene64985:CDS | 45.0% | |
AATTCAAGAGGGAAGAAGGG+AGG | - | chr8.4:39559960-39559979 | None:intergenic | 45.0% | |
ACACAAGGTAGACTCATCTG+GGG | - | chr8.4:39560458-39560477 | None:intergenic | 45.0% | |
ACACACAAGGTAGACTCATC+TGG | - | chr8.4:39560460-39560479 | None:intergenic | 45.0% | |
ACGGAACTTTCGAATGTCAC+GGG | - | chr8.4:39559803-39559822 | None:intergenic | 45.0% | |
AGATCCAGTTCTTGAAGGTG+GGG | - | chr8.4:39559901-39559920 | None:intergenic | 45.0% | |
AGGAACTTTGGTCAGAAGTC+TGG | - | chr8.4:39561641-39561660 | None:intergenic | 45.0% | |
AGGTTAACCCGTGTACCAAA+GGG | + | chr8.4:39562501-39562520 | MS.gene64985:CDS | 45.0% | |
AGTTTCAGCCACTTGAGTGA+TGG | - | chr8.4:39561538-39561557 | None:intergenic | 45.0% | |
ATATTCCGGATTGTTGGGGT+TGG | + | chr8.4:39560236-39560255 | MS.gene64985:intron | 45.0% | |
CACACAAGGTAGACTCATCT+GGG | - | chr8.4:39560459-39560478 | None:intergenic | 45.0% | |
CGACAAATTCACTCTCACGT+TGG | - | chr8.4:39561840-39561859 | None:intergenic | 45.0% | |
CTATGTGAATGTAGGTGAGG+TGG | - | chr8.4:39562350-39562369 | None:intergenic | 45.0% | |
GAACTTTGGTCAGAAGTCTG+GGG | - | chr8.4:39561639-39561658 | None:intergenic | 45.0% | |
GACGGAACTTTCGAATGTCA+CGG | - | chr8.4:39559804-39559823 | None:intergenic | 45.0% | |
GAGATCCAGTTCTTGAAGGT+GGG | - | chr8.4:39559902-39559921 | None:intergenic | 45.0% | |
GGAACTTTGGTCAGAAGTCT+GGG | - | chr8.4:39561640-39561659 | None:intergenic | 45.0% | |
GGATCAGCCAAAACCACATT+AGG | + | chr8.4:39561763-39561782 | MS.gene64985:CDS | 45.0% | |
GGGAATATTCCGGATTGTTG+GGG | + | chr8.4:39560232-39560251 | MS.gene64985:intron | 45.0% | |
GGGGAATATTCCGGATTGTT+GGG | + | chr8.4:39560231-39560250 | MS.gene64985:intron | 45.0% | |
GGTTCTTCCTATCGACAACA+AGG | - | chr8.4:39562270-39562289 | None:intergenic | 45.0% | |
GTGCAATTCAAGAGGGAAGA+AGG | - | chr8.4:39559964-39559983 | None:intergenic | 45.0% | |
GTTGCCAATGATGCCTAATG+TGG | - | chr8.4:39561779-39561798 | None:intergenic | 45.0% | |
TAGGAAGAACCATCACCTGT+AGG | + | chr8.4:39562279-39562298 | MS.gene64985:intron | 45.0% | |
TATGCAGAGTTTCGAGAACG+GGG | - | chr8.4:39561606-39561625 | None:intergenic | 45.0% | |
TCAGACATTGCCTTTCTCTC+TGG | + | chr8.4:39561577-39561596 | MS.gene64985:CDS | 45.0% | |
TGATGTTGGAGGATGAGATG+TGG | + | chr8.4:39560317-39560336 | MS.gene64985:intron | 45.0% | |
TGGAGAGGAATGATAGGATG+TGG | - | chr8.4:39559624-39559643 | None:intergenic | 45.0% | |
TGTGGAGATCCAGTTCTTGA+AGG | - | chr8.4:39559906-39559925 | None:intergenic | 45.0% | |
TGTTTGGCTAGAGGCTGTTT+GGG | + | chr8.4:39560869-39560888 | MS.gene64985:intron | 45.0% | |
TGTTTGTGCATTGGGCTTGT+TGG | + | chr8.4:39560599-39560618 | MS.gene64985:intron | 45.0% | |
TTCGAATGTCACGGGATGTA+CGG | - | chr8.4:39559795-39559814 | None:intergenic | 45.0% | |
TTGTTTGGCTAGAGGCTGTT+TGG | + | chr8.4:39560868-39560887 | MS.gene64985:intron | 45.0% | |
! | ATTTGGGGTATCATAGGGGT+TGG | - | chr8.4:39559932-39559951 | None:intergenic | 45.0% |
! | CCCCGAATTTGTTTGTGCAT+TGG | + | chr8.4:39560590-39560609 | MS.gene64985:intron | 45.0% |
! | GATCGGATTTGGGGTATCAT+AGG | - | chr8.4:39559938-39559957 | None:intergenic | 45.0% |
! | GTATTTTCACGGCAAAGGGT+TGG | + | chr8.4:39560527-39560546 | MS.gene64985:intron | 45.0% |
! | GTTGGTGAGTTTGATGTTGG+AGG | + | chr8.4:39560306-39560325 | MS.gene64985:intron | 45.0% |
! | TCGGATTTGGGGTATCATAG+GGG | - | chr8.4:39559936-39559955 | None:intergenic | 45.0% |
! | TTTATAACAGGGGCACGAAG+CGG | - | chr8.4:39562031-39562050 | None:intergenic | 45.0% |
!! | AAGAGTGCTTGTTGCGGTAA+AGG | + | chr8.4:39560842-39560861 | MS.gene64985:intron | 45.0% |
!! | ATCCTCAAGAGTGCTTGTTG+CGG | + | chr8.4:39560836-39560855 | MS.gene64985:intron | 45.0% |
!! | GAGGTTGGTGCAATTCAAGA+GGG | - | chr8.4:39559971-39559990 | None:intergenic | 45.0% |
!! | GGCTTGATGATGTGTACAGT+TGG | + | chr8.4:39561740-39561759 | MS.gene64985:CDS | 45.0% |
!! | GGGCTTGTTGGAGTAATGAA+GGG | + | chr8.4:39560611-39560630 | MS.gene64985:intron | 45.0% |
!! | TGGGCTTGTTGGAGTAATGA+AGG | + | chr8.4:39560610-39560629 | MS.gene64985:intron | 45.0% |
AAACCTGACGATGCTTCCAG+AGG | - | chr8.4:39559693-39559712 | None:intergenic | 50.0% | |
AAGAGGGAAGAAGGGAGGAT+CGG | - | chr8.4:39559955-39559974 | None:intergenic | 50.0% | |
AAGCTCACCTGAGTGAAACG+AGG | - | chr8.4:39559990-39560009 | None:intergenic | 50.0% | |
AATGTCACGGGATGTACGGA+GGG | - | chr8.4:39559791-39559810 | None:intergenic | 50.0% | |
ACAAGGTAGACTCATCTGGG+GGG | - | chr8.4:39560456-39560475 | None:intergenic | 50.0% | |
ACGAGTAGTCGTCGTCGAAT+TGG | - | chr8.4:39559717-39559736 | None:intergenic | 50.0% | |
AGAAGGGAGGATCGGATTTG+GGG | - | chr8.4:39559947-39559966 | None:intergenic | 50.0% | |
ATAGCGAAACGACGGAAACC+AGG | + | chr8.4:39559541-39559560 | MS.gene64985:CDS | 50.0% | |
CACAAGGTAGACTCATCTGG+GGG | - | chr8.4:39560457-39560476 | None:intergenic | 50.0% | |
CCTCTCCATTAAAACCGCTG+TGG | + | chr8.4:39559636-39559655 | MS.gene64985:CDS | 50.0% | |
CGAAAGTTCCGTCTCCATTG+TGG | + | chr8.4:39559811-39559830 | MS.gene64985:CDS | 50.0% | |
GAAGAAGGGAGGATCGGATT+TGG | - | chr8.4:39559949-39559968 | None:intergenic | 50.0% | |
GGAGATCCAGTTCTTGAAGG+TGG | - | chr8.4:39559903-39559922 | None:intergenic | 50.0% | |
GGATTGTTGGGGTTGGAAAC+CGG | + | chr8.4:39560243-39560262 | MS.gene64985:intron | 50.0% | |
GGGGGAATATTCCGGATTGT+TGG | + | chr8.4:39560230-39560249 | MS.gene64985:intron | 50.0% | |
GGTTTCCAACCCCAACAATC+CGG | - | chr8.4:39560244-39560263 | None:intergenic | 50.0% | |
TACCACTCGCGGCAAAGAAA+AGG | - | chr8.4:39561105-39561124 | None:intergenic | 50.0% | |
TACCGCAACAAGCACTCTTG+AGG | - | chr8.4:39560841-39560860 | None:intergenic | 50.0% | |
TCACATGCTCCTACAGGTGA+TGG | - | chr8.4:39562291-39562310 | None:intergenic | 50.0% | |
TCACCTGAGTGAAACGAGGT+TGG | - | chr8.4:39559986-39560005 | None:intergenic | 50.0% | |
TGACAGAGCCCTTTGGTACA+CGG | - | chr8.4:39562512-39562531 | None:intergenic | 50.0% | |
! | CACGTGTTGATGCAGTTGCT+GGG | - | chr8.4:39559859-39559878 | None:intergenic | 50.0% |
! | TAATGGTGATGTTGTGGCGG+TGG | + | chr8.4:39560761-39560780 | MS.gene64985:intron | 50.0% |
! | TATCATAGGGGTTGGCGATG+TGG | - | chr8.4:39559924-39559943 | None:intergenic | 50.0% |
! | TGGTAGTGAGCTTAGTGCCT+TGG | + | chr8.4:39561027-39561046 | MS.gene64985:CDS | 50.0% |
! | TGGTGTGCCTTGTTGTCGAT+AGG | + | chr8.4:39562260-39562279 | MS.gene64985:intron | 50.0% |
! | TTCCTTTTCTTTGCCGCGAG+TGG | + | chr8.4:39561100-39561119 | MS.gene64985:intron | 50.0% |
! | TTTGGGTGATTTGGCAAGCG+AGG | + | chr8.4:39560683-39560702 | MS.gene64985:intron | 50.0% |
!! | CCACAGCGGTTTTAATGGAG+AGG | - | chr8.4:39559639-39559658 | None:intergenic | 50.0% |
!! | CGAGGTTGGTGCAATTCAAG+AGG | - | chr8.4:39559972-39559991 | None:intergenic | 50.0% |
!! | CGAGTCTTGTTTCTCGCAGA+TGG | + | chr8.4:39559662-39559681 | MS.gene64985:CDS | 50.0% |
!! | GAGAAAGTACCACCCTCTTC+CGG | - | chr8.4:39560265-39560284 | None:intergenic | 50.0% |
!! | GGAAGGTGTCACAGGAACTT+TGG | - | chr8.4:39561653-39561672 | None:intergenic | 50.0% |
!! | TTCTTGGAGGAAGGTGTCAC+AGG | - | chr8.4:39561661-39561680 | None:intergenic | 50.0% |
AACAAGACTCGTCGCCACAG+CGG | - | chr8.4:39559653-39559672 | None:intergenic | 55.0% | |
AGGCTGTTTGGGTGAAGCCT+GGG | + | chr8.4:39560880-39560899 | MS.gene64985:intron | 55.0% | |
CATTACCGGGACCTTGGTAG+CGG | - | chr8.4:39561882-39561901 | None:intergenic | 55.0% | |
CCAGCAACTGCATCAACACG+TGG | + | chr8.4:39559857-39559876 | MS.gene64985:CDS | 55.0% | |
GAATGTCACGGGATGTACGG+AGG | - | chr8.4:39559792-39559811 | None:intergenic | 55.0% | |
GACAGAGCCCTTTGGTACAC+GGG | - | chr8.4:39562511-39562530 | None:intergenic | 55.0% | |
GCACCAACCTCGTTTCACTC+AGG | + | chr8.4:39559980-39559999 | MS.gene64985:CDS | 55.0% | |
GCTCACTACCAATCCCATCC+TGG | - | chr8.4:39561018-39561037 | None:intergenic | 55.0% | |
TGCAGCTCACATGCTCCTAC+AGG | - | chr8.4:39562297-39562316 | None:intergenic | 55.0% | |
TGGCAAGTGACAGAGCCCTT+TGG | - | chr8.4:39562519-39562538 | None:intergenic | 55.0% | |
TGGCGGAGATAGCGAAACGA+CGG | + | chr8.4:39559533-39559552 | MS.gene64985:CDS | 55.0% | |
TGGGGTTGGAAACCGGAAGA+GGG | + | chr8.4:39560250-39560269 | MS.gene64985:intron | 55.0% | |
TGGGTATGCCAGGATGGGAT+TGG | + | chr8.4:39561007-39561026 | MS.gene64985:CDS | 55.0% | |
TTCTTGAAGGTGGGGCCCAA+TGG | - | chr8.4:39559893-39559912 | None:intergenic | 55.0% | |
TTGGGGTTGGAAACCGGAAG+AGG | + | chr8.4:39560249-39560268 | MS.gene64985:intron | 55.0% | |
! | CCACGTGTTGATGCAGTTGC+TGG | - | chr8.4:39559860-39559879 | None:intergenic | 55.0% |
! | TAGAGCTGGTGTTGAGGCGT+GGG | + | chr8.4:39560988-39561007 | MS.gene64985:intron | 55.0% |
! | TTAGAGCTGGTGTTGAGGCG+TGG | + | chr8.4:39560987-39561006 | MS.gene64985:intron | 55.0% |
!! | CAACCTCTGGAAGCATCGTC+AGG | + | chr8.4:39559687-39559706 | MS.gene64985:CDS | 55.0% |
!! | CGTCGCCACAGCGGTTTTAA+TGG | - | chr8.4:39559644-39559663 | None:intergenic | 55.0% |
AACGGGGCAGCCAGAGAGAA+AGG | - | chr8.4:39561590-39561609 | None:intergenic | 60.0% | |
AGGCGTGGGTATGCCAGGAT+GGG | + | chr8.4:39561002-39561021 | MS.gene64985:CDS | 60.0% | |
CTCAACCGCTTCCGCTACCA+AGG | + | chr8.4:39561868-39561887 | MS.gene64985:CDS | 60.0% | |
GAGGCTGTTTGGGTGAAGCC+TGG | + | chr8.4:39560879-39560898 | MS.gene64985:intron | 60.0% | |
GGTTGGAAACCGGAAGAGGG+TGG | + | chr8.4:39560253-39560272 | MS.gene64985:intron | 60.0% | |
TGGGCCCCACCTTCAAGAAC+TGG | + | chr8.4:39559894-39559913 | MS.gene64985:CDS | 60.0% | |
TGTTGAGGCGTGGGTATGCC+AGG | + | chr8.4:39560997-39561016 | MS.gene64985:CDS | 60.0% | |
TTGAAGGTGGGGCCCAATGG+CGG | - | chr8.4:39559890-39559909 | None:intergenic | 60.0% | |
ACGTGGATCGCTGCCGCCAT+TGG | + | chr8.4:39559874-39559893 | MS.gene64985:CDS | 65.0% | |
CGCTTCCGCTACCAAGGTCC+CGG | + | chr8.4:39561874-39561893 | MS.gene64985:CDS | 65.0% | |
CGTGGATCGCTGCCGCCATT+GGG | + | chr8.4:39559875-39559894 | MS.gene64985:CDS | 65.0% | |
CTCGCAGATGGCGCAACCTC+TGG | + | chr8.4:39559674-39559693 | MS.gene64985:CDS | 65.0% | |
GAGGCGTGGGTATGCCAGGA+TGG | + | chr8.4:39561001-39561020 | MS.gene64985:CDS | 65.0% | |
!! | CGGGACCTTGGTAGCGGAAG+CGG | - | chr8.4:39561876-39561895 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 39559532 | 39562569 | 39559532 | ID=MS.gene64985 |
chr8.4 | mRNA | 39559532 | 39562569 | 39559532 | ID=MS.gene64985.t1;Parent=MS.gene64985 |
chr8.4 | exon | 39559532 | 39560001 | 39559532 | ID=MS.gene64985.t1.exon1;Parent=MS.gene64985.t1 |
chr8.4 | CDS | 39559532 | 39560001 | 39559532 | ID=cds.MS.gene64985.t1;Parent=MS.gene64985.t1 |
chr8.4 | exon | 39560991 | 39561048 | 39560991 | ID=MS.gene64985.t1.exon2;Parent=MS.gene64985.t1 |
chr8.4 | CDS | 39560991 | 39561048 | 39560991 | ID=cds.MS.gene64985.t1;Parent=MS.gene64985.t1 |
chr8.4 | exon | 39561547 | 39561936 | 39561547 | ID=MS.gene64985.t1.exon3;Parent=MS.gene64985.t1 |
chr8.4 | CDS | 39561547 | 39561936 | 39561547 | ID=cds.MS.gene64985.t1;Parent=MS.gene64985.t1 |
chr8.4 | exon | 39562118 | 39562174 | 39562118 | ID=MS.gene64985.t1.exon4;Parent=MS.gene64985.t1 |
chr8.4 | CDS | 39562118 | 39562174 | 39562118 | ID=cds.MS.gene64985.t1;Parent=MS.gene64985.t1 |
chr8.4 | exon | 39562282 | 39562569 | 39562282 | ID=MS.gene64985.t1.exon5;Parent=MS.gene64985.t1 |
chr8.4 | CDS | 39562282 | 39562569 | 39562282 | ID=cds.MS.gene64985.t1;Parent=MS.gene64985.t1 |
Gene Sequence |
Protein sequence |