Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79058.t1 | AFK43236.1 | 98.6 | 147 | 2 | 0 | 96 | 242 | 95 | 241 | 2.80E-77 | 298.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79058.t1 | P82658 | 78.8 | 146 | 31 | 0 | 96 | 241 | 81 | 226 | 2.7e-65 | 250.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79058.t1 | G7IWL6 | 98.6 | 147 | 2 | 0 | 96 | 242 | 96 | 242 | 2.0e-77 | 298.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene79058 | 0.836182 | 1.09E-56 | -1.69E-46 |
| MS.gene049217 | MS.gene79058 | 0.835785 | 1.37E-56 | -1.69E-46 |
| MS.gene049222 | MS.gene79058 | 0.844652 | 6.62E-59 | -1.69E-46 |
| MS.gene049285 | MS.gene79058 | 0.848233 | 6.98E-60 | -1.69E-46 |
| MS.gene049320 | MS.gene79058 | 0.851746 | 7.26E-61 | -1.69E-46 |
| MS.gene049351 | MS.gene79058 | 0.833206 | 6.09E-56 | -1.69E-46 |
| MS.gene049356 | MS.gene79058 | 0.819407 | 1.18E-52 | -1.69E-46 |
| MS.gene049369 | MS.gene79058 | 0.828402 | 9.17E-55 | -1.69E-46 |
| MS.gene049427 | MS.gene79058 | 0.912514 | 1.78E-83 | -1.69E-46 |
| MS.gene049491 | MS.gene79058 | 0.807339 | 5.30E-50 | -1.69E-46 |
| MS.gene049609 | MS.gene79058 | 0.859998 | 2.81E-63 | -1.69E-46 |
| MS.gene049614 | MS.gene79058 | 0.852139 | 5.62E-61 | -1.69E-46 |
| MS.gene049661 | MS.gene79058 | 0.856612 | 2.86E-62 | -1.69E-46 |
| MS.gene049662 | MS.gene79058 | 0.847247 | 1.31E-59 | -1.69E-46 |
| MS.gene049760 | MS.gene79058 | 0.811012 | 8.66E-51 | -1.69E-46 |
| MS.gene049805 | MS.gene79058 | 0.885915 | 5.39E-72 | -1.69E-46 |
| MS.gene050076 | MS.gene79058 | 0.871624 | 5.93E-67 | -1.69E-46 |
| MS.gene050163 | MS.gene79058 | 0.851394 | 9.13E-61 | -1.69E-46 |
| MS.gene050165 | MS.gene79058 | 0.819199 | 1.32E-52 | -1.69E-46 |
| MS.gene050301 | MS.gene79058 | 0.820394 | 7.02E-53 | -1.69E-46 |
| MS.gene050333 | MS.gene79058 | 0.816603 | 5.08E-52 | -1.69E-46 |
| MS.gene050397 | MS.gene79058 | 0.811482 | 6.85E-51 | -1.69E-46 |
| MS.gene050432 | MS.gene79058 | 0.901213 | 3.36E-78 | -1.69E-46 |
| MS.gene050504 | MS.gene79058 | 0.809387 | 1.94E-50 | -1.69E-46 |
| MS.gene050518 | MS.gene79058 | 0.831733 | 1.41E-55 | -1.69E-46 |
| MS.gene050520 | MS.gene79058 | 0.817241 | 3.65E-52 | -1.69E-46 |
| MS.gene050529 | MS.gene79058 | 0.80249 | 5.47E-49 | -1.69E-46 |
| MS.gene050538 | MS.gene79058 | 0.847929 | 8.47E-60 | -1.69E-46 |
| MS.gene050593 | MS.gene79058 | 0.852992 | 3.21E-61 | -1.69E-46 |
| MS.gene050612 | MS.gene79058 | 0.82068 | 6.03E-53 | -1.69E-46 |
| MS.gene050670 | MS.gene79058 | 0.838401 | 2.94E-57 | -1.69E-46 |
| MS.gene050686 | MS.gene79058 | 0.822136 | 2.78E-53 | -1.69E-46 |
| MS.gene050699 | MS.gene79058 | 0.826295 | 2.93E-54 | -1.69E-46 |
| MS.gene050747 | MS.gene79058 | 0.865587 | 5.30E-65 | -1.69E-46 |
| MS.gene050767 | MS.gene79058 | 0.883534 | 4.14E-71 | -1.69E-46 |
| MS.gene050770 | MS.gene79058 | 0.885957 | 5.19E-72 | -1.69E-46 |
| MS.gene050772 | MS.gene79058 | 0.882035 | 1.46E-70 | -1.69E-46 |
| MS.gene050783 | MS.gene79058 | 0.809979 | 1.45E-50 | -1.69E-46 |
| MS.gene050812 | MS.gene79058 | 0.815097 | 1.10E-51 | -1.69E-46 |
| MS.gene050950 | MS.gene79058 | 0.865639 | 5.10E-65 | -1.69E-46 |
| MS.gene05100 | MS.gene79058 | 0.852092 | 5.79E-61 | -1.69E-46 |
| MS.gene05101 | MS.gene79058 | 0.858675 | 7.00E-63 | -1.69E-46 |
| MS.gene05105 | MS.gene79058 | 0.863631 | 2.17E-64 | -1.69E-46 |
| MS.gene051228 | MS.gene79058 | 0.842728 | 2.17E-58 | -1.69E-46 |
| MS.gene051387 | MS.gene79058 | 0.878414 | 2.86E-69 | -1.69E-46 |
| MS.gene051471 | MS.gene79058 | 0.821816 | 3.30E-53 | -1.69E-46 |
| MS.gene051551 | MS.gene79058 | 0.807394 | 5.16E-50 | -1.69E-46 |
| MS.gene051582 | MS.gene79058 | 0.818736 | 1.68E-52 | -1.69E-46 |
| MS.gene051666 | MS.gene79058 | 0.880858 | 3.88E-70 | -1.69E-46 |
| MS.gene051692 | MS.gene79058 | 0.832213 | 1.07E-55 | -1.69E-46 |
| MS.gene051694 | MS.gene79058 | 0.813339 | 2.69E-51 | -1.69E-46 |
| MS.gene051810 | MS.gene79058 | 0.856176 | 3.84E-62 | -1.69E-46 |
| MS.gene051858 | MS.gene79058 | 0.824097 | 9.71E-54 | -1.69E-46 |
| MS.gene052078 | MS.gene79058 | 0.812812 | 3.51E-51 | -1.69E-46 |
| MS.gene052188 | MS.gene79058 | 0.810477 | 1.13E-50 | -1.69E-46 |
| MS.gene052271 | MS.gene79058 | 0.880567 | 4.94E-70 | -1.69E-46 |
| MS.gene052290 | MS.gene79058 | 0.872263 | 3.64E-67 | -1.69E-46 |
| MS.gene052310 | MS.gene79058 | 0.854944 | 8.78E-62 | -1.69E-46 |
| MS.gene052322 | MS.gene79058 | 0.834718 | 2.55E-56 | -1.69E-46 |
| MS.gene052326 | MS.gene79058 | 0.849628 | 2.86E-60 | -1.69E-46 |
| MS.gene052340 | MS.gene79058 | 0.807629 | 4.60E-50 | -1.69E-46 |
| MS.gene052379 | MS.gene79058 | 0.867046 | 1.83E-65 | -1.69E-46 |
| MS.gene052421 | MS.gene79058 | 0.871623 | 5.94E-67 | -1.69E-46 |
| MS.gene052481 | MS.gene79058 | 0.836266 | 1.03E-56 | -1.69E-46 |
| MS.gene052484 | MS.gene79058 | 0.84628 | 2.40E-59 | -1.69E-46 |
| MS.gene052485 | MS.gene79058 | 0.845648 | 3.56E-59 | -1.69E-46 |
| MS.gene052505 | MS.gene79058 | 0.803946 | 2.74E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene79058 | 0.883375 | 4.73E-71 | -1.69E-46 |
| MS.gene052870 | MS.gene79058 | 0.806697 | 7.25E-50 | -1.69E-46 |
| MS.gene052872 | MS.gene79058 | 0.80033 | 1.52E-48 | -1.69E-46 |
| MS.gene052916 | MS.gene79058 | 0.82545 | 4.66E-54 | -1.69E-46 |
| MS.gene052982 | MS.gene79058 | 0.81477 | 1.30E-51 | -1.69E-46 |
| MS.gene053009 | MS.gene79058 | 0.859051 | 5.40E-63 | -1.69E-46 |
| MS.gene053103 | MS.gene79058 | 0.873127 | 1.87E-67 | -1.69E-46 |
| MS.gene053104 | MS.gene79058 | 0.883847 | 3.17E-71 | -1.69E-46 |
| MS.gene053107 | MS.gene79058 | 0.852262 | 5.18E-61 | -1.69E-46 |
| MS.gene053207 | MS.gene79058 | 0.871736 | 5.44E-67 | -1.69E-46 |
| MS.gene053209 | MS.gene79058 | 0.845602 | 3.67E-59 | -1.69E-46 |
| MS.gene053213 | MS.gene79058 | 0.89698 | 2.19E-76 | -1.69E-46 |
| MS.gene053286 | MS.gene79058 | 0.88589 | 5.50E-72 | -1.69E-46 |
| MS.gene053322 | MS.gene79058 | 0.917528 | 4.76E-86 | -1.69E-46 |
| MS.gene053436 | MS.gene79058 | 0.839055 | 1.99E-57 | -1.69E-46 |
| MS.gene053574 | MS.gene79058 | 0.863233 | 2.88E-64 | -1.69E-46 |
| MS.gene053579 | MS.gene79058 | 0.822264 | 2.60E-53 | -1.69E-46 |
| MS.gene053632 | MS.gene79058 | 0.857974 | 1.13E-62 | -1.69E-46 |
| MS.gene053813 | MS.gene79058 | 0.849476 | 3.16E-60 | -1.69E-46 |
| MS.gene053915 | MS.gene79058 | 0.801487 | 8.80E-49 | -1.69E-46 |
| MS.gene053916 | MS.gene79058 | 0.828591 | 8.26E-55 | -1.69E-46 |
| MS.gene054123 | MS.gene79058 | 0.825246 | 5.20E-54 | -1.69E-46 |
| MS.gene054376 | MS.gene79058 | 0.876413 | 1.42E-68 | -1.69E-46 |
| MS.gene054408 | MS.gene79058 | 0.858348 | 8.76E-63 | -1.69E-46 |
| MS.gene054595 | MS.gene79058 | 0.808835 | 2.55E-50 | -1.69E-46 |
| MS.gene054600 | MS.gene79058 | 0.848898 | 4.57E-60 | -1.69E-46 |
| MS.gene054642 | MS.gene79058 | 0.888389 | 6.17E-73 | -1.69E-46 |
| MS.gene054802 | MS.gene79058 | 0.87521 | 3.69E-68 | -1.69E-46 |
| MS.gene054803 | MS.gene79058 | 0.872254 | 3.66E-67 | -1.69E-46 |
| MS.gene054804 | MS.gene79058 | 0.875286 | 3.47E-68 | -1.69E-46 |
| MS.gene054927 | MS.gene79058 | 0.807687 | 4.48E-50 | -1.69E-46 |
| MS.gene054954 | MS.gene79058 | 0.802873 | 4.56E-49 | -1.69E-46 |
| MS.gene05505 | MS.gene79058 | 0.88708 | 1.95E-72 | -1.69E-46 |
| MS.gene055116 | MS.gene79058 | 0.843289 | 1.54E-58 | -1.69E-46 |
| MS.gene055206 | MS.gene79058 | 0.846934 | 1.59E-59 | -1.69E-46 |
| MS.gene055212 | MS.gene79058 | 0.822697 | 2.06E-53 | -1.69E-46 |
| MS.gene055224 | MS.gene79058 | 0.807047 | 6.12E-50 | -1.69E-46 |
| MS.gene055254 | MS.gene79058 | 0.829193 | 5.90E-55 | -1.69E-46 |
| MS.gene055277 | MS.gene79058 | 0.862874 | 3.72E-64 | -1.69E-46 |
| MS.gene055289 | MS.gene79058 | 0.836362 | 9.78E-57 | -1.69E-46 |
| MS.gene055362 | MS.gene79058 | 0.834229 | 3.38E-56 | -1.69E-46 |
| MS.gene055390 | MS.gene79058 | 0.819164 | 1.34E-52 | -1.69E-46 |
| MS.gene055397 | MS.gene79058 | 0.893673 | 5.05E-75 | -1.69E-46 |
| MS.gene055412 | MS.gene79058 | 0.887579 | 1.26E-72 | -1.69E-46 |
| MS.gene055422 | MS.gene79058 | 0.801561 | 8.50E-49 | -1.69E-46 |
| MS.gene055428 | MS.gene79058 | 0.808706 | 2.72E-50 | -1.69E-46 |
| MS.gene055499 | MS.gene79058 | 0.89574 | 7.19E-76 | -1.69E-46 |
| MS.gene055502 | MS.gene79058 | 0.827492 | 1.52E-54 | -1.69E-46 |
| MS.gene055577 | MS.gene79058 | 0.804003 | 2.66E-49 | -1.69E-46 |
| MS.gene055636 | MS.gene79058 | 0.817153 | 3.82E-52 | -1.69E-46 |
| MS.gene055638 | MS.gene79058 | 0.800848 | 1.19E-48 | -1.69E-46 |
| MS.gene055647 | MS.gene79058 | 0.875212 | 3.68E-68 | -1.69E-46 |
| MS.gene055722 | MS.gene79058 | 0.872984 | 2.09E-67 | -1.69E-46 |
| MS.gene055896 | MS.gene79058 | 0.827523 | 1.49E-54 | -1.69E-46 |
| MS.gene05592 | MS.gene79058 | 0.892393 | 1.65E-74 | -1.69E-46 |
| MS.gene055941 | MS.gene79058 | 0.831793 | 1.37E-55 | -1.69E-46 |
| MS.gene056083 | MS.gene79058 | 0.836291 | 1.02E-56 | -1.69E-46 |
| MS.gene056191 | MS.gene79058 | 0.819309 | 1.24E-52 | -1.69E-46 |
| MS.gene056374 | MS.gene79058 | 0.888485 | 5.66E-73 | -1.69E-46 |
| MS.gene056407 | MS.gene79058 | 0.845253 | 4.56E-59 | -1.69E-46 |
| MS.gene056410 | MS.gene79058 | 0.821562 | 3.78E-53 | -1.69E-46 |
| MS.gene056422 | MS.gene79058 | 0.811574 | 6.54E-51 | -1.69E-46 |
| MS.gene056448 | MS.gene79058 | 0.816656 | 4.94E-52 | -1.69E-46 |
| MS.gene056487 | MS.gene79058 | 0.812936 | 3.30E-51 | -1.69E-46 |
| MS.gene056511 | MS.gene79058 | 0.845566 | 3.75E-59 | -1.69E-46 |
| MS.gene056609 | MS.gene79058 | 0.857739 | 1.33E-62 | -1.69E-46 |
| MS.gene056657 | MS.gene79058 | 0.862663 | 4.32E-64 | -1.69E-46 |
| MS.gene056796 | MS.gene79058 | 0.806198 | 9.24E-50 | -1.69E-46 |
| MS.gene056897 | MS.gene79058 | 0.863993 | 1.67E-64 | -1.69E-46 |
| MS.gene056942 | MS.gene79058 | 0.812515 | 4.08E-51 | -1.69E-46 |
| MS.gene057011 | MS.gene79058 | 0.910352 | 2.06E-82 | -1.69E-46 |
| MS.gene05702 | MS.gene79058 | 0.810787 | 9.69E-51 | -1.69E-46 |
| MS.gene057076 | MS.gene79058 | 0.833891 | 4.11E-56 | -1.69E-46 |
| MS.gene057123 | MS.gene79058 | 0.825948 | 3.55E-54 | -1.69E-46 |
| MS.gene057124 | MS.gene79058 | 0.839885 | 1.21E-57 | -1.69E-46 |
| MS.gene057129 | MS.gene79058 | 0.90966 | 4.46E-82 | -1.69E-46 |
| MS.gene057146 | MS.gene79058 | 0.87607 | 1.87E-68 | -1.69E-46 |
| MS.gene057285 | MS.gene79058 | 0.808424 | 3.12E-50 | -1.69E-46 |
| MS.gene057295 | MS.gene79058 | 0.814172 | 1.76E-51 | -1.69E-46 |
| MS.gene057331 | MS.gene79058 | 0.87345 | 1.46E-67 | -1.69E-46 |
| MS.gene05735 | MS.gene79058 | 0.843875 | 1.07E-58 | -1.69E-46 |
| MS.gene057416 | MS.gene79058 | 0.895723 | 7.31E-76 | -1.69E-46 |
| MS.gene057734 | MS.gene79058 | 0.80083 | 1.20E-48 | -1.69E-46 |
| MS.gene057823 | MS.gene79058 | 0.800532 | 1.38E-48 | -1.69E-46 |
| MS.gene057831 | MS.gene79058 | 0.800688 | 1.28E-48 | -1.69E-46 |
| MS.gene057926 | MS.gene79058 | 0.807178 | 5.74E-50 | -1.69E-46 |
| MS.gene058006 | MS.gene79058 | 0.833668 | 4.67E-56 | -1.69E-46 |
| MS.gene058019 | MS.gene79058 | 0.86478 | 9.50E-65 | -1.69E-46 |
| MS.gene058130 | MS.gene79058 | 0.86988 | 2.22E-66 | -1.69E-46 |
| MS.gene058233 | MS.gene79058 | 0.830971 | 2.17E-55 | -1.69E-46 |
| MS.gene058293 | MS.gene79058 | 0.878148 | 3.55E-69 | -1.69E-46 |
| MS.gene058323 | MS.gene79058 | 0.867304 | 1.51E-65 | -1.69E-46 |
| MS.gene058365 | MS.gene79058 | 0.812165 | 4.86E-51 | -1.69E-46 |
| MS.gene05837 | MS.gene79058 | 0.802217 | 6.23E-49 | -1.69E-46 |
| MS.gene058419 | MS.gene79058 | 0.858908 | 5.96E-63 | -1.69E-46 |
| MS.gene058544 | MS.gene79058 | 0.841882 | 3.63E-58 | -1.69E-46 |
| MS.gene058660 | MS.gene79058 | 0.889542 | 2.21E-73 | -1.69E-46 |
| MS.gene058723 | MS.gene79058 | 0.83281 | 7.64E-56 | -1.69E-46 |
| MS.gene058773 | MS.gene79058 | 0.821207 | 4.56E-53 | -1.69E-46 |
| MS.gene058787 | MS.gene79058 | 0.813978 | 1.95E-51 | -1.69E-46 |
| MS.gene05883 | MS.gene79058 | 0.849652 | 2.82E-60 | -1.69E-46 |
| MS.gene058928 | MS.gene79058 | 0.820881 | 5.43E-53 | -1.69E-46 |
| MS.gene059022 | MS.gene79058 | 0.808916 | 2.45E-50 | -1.69E-46 |
| MS.gene059023 | MS.gene79058 | 0.802335 | 5.89E-49 | -1.69E-46 |
| MS.gene059029 | MS.gene79058 | 0.855858 | 4.76E-62 | -1.69E-46 |
| MS.gene05907 | MS.gene79058 | 0.808267 | 3.37E-50 | -1.69E-46 |
| MS.gene05934 | MS.gene79058 | 0.836512 | 8.96E-57 | -1.69E-46 |
| MS.gene059366 | MS.gene79058 | 0.81337 | 2.65E-51 | -1.69E-46 |
| MS.gene059367 | MS.gene79058 | 0.802835 | 4.65E-49 | -1.69E-46 |
| MS.gene059368 | MS.gene79058 | 0.81666 | 4.93E-52 | -1.69E-46 |
| MS.gene059536 | MS.gene79058 | 0.883778 | 3.36E-71 | -1.69E-46 |
| MS.gene059597 | MS.gene79058 | 0.820824 | 5.59E-53 | -1.69E-46 |
| MS.gene05959 | MS.gene79058 | 0.809294 | 2.03E-50 | -1.69E-46 |
| MS.gene059676 | MS.gene79058 | 0.844601 | 6.83E-59 | -1.69E-46 |
| MS.gene059677 | MS.gene79058 | 0.826336 | 2.87E-54 | -1.69E-46 |
| MS.gene059688 | MS.gene79058 | 0.894048 | 3.56E-75 | -1.69E-46 |
| MS.gene059692 | MS.gene79058 | 0.882505 | 9.84E-71 | -1.69E-46 |
| MS.gene059695 | MS.gene79058 | 0.883714 | 3.55E-71 | -1.69E-46 |
| MS.gene059708 | MS.gene79058 | 0.809517 | 1.82E-50 | -1.69E-46 |
| MS.gene059711 | MS.gene79058 | 0.853184 | 2.83E-61 | -1.69E-46 |
| MS.gene059718 | MS.gene79058 | 0.850724 | 1.41E-60 | -1.69E-46 |
| MS.gene059858 | MS.gene79058 | 0.80097 | 1.12E-48 | -1.69E-46 |
| MS.gene059894 | MS.gene79058 | 0.808706 | 2.71E-50 | -1.69E-46 |
| MS.gene059902 | MS.gene79058 | 0.824591 | 7.43E-54 | -1.69E-46 |
| MS.gene059960 | MS.gene79058 | 0.914379 | 2.05E-84 | -1.69E-46 |
| MS.gene060193 | MS.gene79058 | 0.815669 | 8.21E-52 | -1.69E-46 |
| MS.gene060356 | MS.gene79058 | 0.81664 | 4.98E-52 | -1.69E-46 |
| MS.gene060403 | MS.gene79058 | 0.830529 | 2.79E-55 | -1.69E-46 |
| MS.gene060482 | MS.gene79058 | 0.818365 | 2.04E-52 | -1.69E-46 |
| MS.gene060804 | MS.gene79058 | 0.903929 | 2.09E-79 | -1.69E-46 |
| MS.gene060818 | MS.gene79058 | 0.870449 | 1.45E-66 | -1.69E-46 |
| MS.gene060835 | MS.gene79058 | 0.836223 | 1.06E-56 | -1.69E-46 |
| MS.gene060837 | MS.gene79058 | 0.858445 | 8.20E-63 | -1.69E-46 |
| MS.gene06092 | MS.gene79058 | 0.86654 | 2.65E-65 | -1.69E-46 |
| MS.gene061041 | MS.gene79058 | 0.870977 | 9.70E-67 | -1.69E-46 |
| MS.gene061049 | MS.gene79058 | 0.80177 | 7.70E-49 | -1.69E-46 |
| MS.gene061051 | MS.gene79058 | -0.863603 | 2.21E-64 | -1.69E-46 |
| MS.gene061134 | MS.gene79058 | 0.83075 | 2.46E-55 | -1.69E-46 |
| MS.gene061150 | MS.gene79058 | 0.850874 | 1.28E-60 | -1.69E-46 |
| MS.gene061171 | MS.gene79058 | 0.810284 | 1.24E-50 | -1.69E-46 |
| MS.gene061200 | MS.gene79058 | 0.911134 | 8.57E-83 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79058.t1 | MTR_3g028150 | 92.958 | 213 | 13 | 1 | 30 | 242 | 32 | 242 | 1.18e-137 | 386 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79058.t1 | AT3G63540 | 78.261 | 138 | 30 | 0 | 104 | 241 | 3 | 140 | 4.29e-82 | 242 |
Find 46 sgRNAs with CRISPR-Local
Find 53 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATATCTAACTTTCCTTTC+TGG | 0.121727 | 3.1:-20332809 | MS.gene79058:CDS |
| GGTGGAGGAGGAGGAGAAAA+TGG | 0.215436 | 3.1:+20333189 | None:intergenic |
| AAACGTTCCTTCCAACCTTC+TGG | 0.272048 | 3.1:+20332905 | None:intergenic |
| AATATCTAACTTTCCTTTCT+GGG | 0.289515 | 3.1:-20332808 | MS.gene79058:CDS |
| TTCTGCTGAGTCTTTCTTGT+TGG | 0.307382 | 3.1:+20332943 | None:intergenic |
| TTAATATCAAAAGTAGAAAA+AGG | 0.345146 | 3.1:-20332884 | MS.gene79058:CDS |
| GGTGGTTGTTGTGGTGGTGC+TGG | 0.347336 | 3.1:+20333168 | None:intergenic |
| TGTGGTGGTGCTGGTGGAGG+AGG | 0.352502 | 3.1:+20333177 | None:intergenic |
| TGTTGTGGTGGTGCTGGTGG+AGG | 0.368074 | 3.1:+20333174 | None:intergenic |
| GGTGGTGCTGGTGGAGGAGG+AGG | 0.373159 | 3.1:+20333180 | None:intergenic |
| GGTGGTTGTGGTGGTTGTTG+TGG | 0.401207 | 3.1:+20333159 | None:intergenic |
| GGTTGTTGTGGTGGTGCTGG+TGG | 0.406983 | 3.1:+20333171 | None:intergenic |
| GTTAAGGTGGTGGTTATTAG+AGG | 0.416358 | 3.1:+20333097 | None:intergenic |
| TTGTTCAAGACAGCGTCTTT+TGG | 0.421438 | 3.1:+20332770 | None:intergenic |
| TATTATGTTTATGAGATTGA+TGG | 0.453881 | 3.1:-20332656 | MS.gene79058:CDS |
| GTGGAGGAGGAGGAGAAAAT+GGG | 0.454320 | 3.1:+20333190 | None:intergenic |
| GGTTGTGGTGGTTGTTGTGG+TGG | 0.455647 | 3.1:+20333162 | None:intergenic |
| TGTGCCGTAGTAGAGATTGT+AGG | 0.481893 | 3.1:+20333006 | None:intergenic |
| GGGAGATGATTCTGCTGCTA+TGG | 0.482398 | 3.1:+20333027 | None:intergenic |
| GAAGAAGTGAAAGATGATAA+AGG | 0.482410 | 3.1:-20332686 | MS.gene79058:CDS |
| TCTTTATTCCACTCAGGAGT+AGG | 0.485770 | 3.1:+20332563 | None:intergenic |
| GCAGCAAACTACGGCGGCTA+CGG | 0.501712 | 3.1:-20332974 | MS.gene79058:CDS |
| AGGTGGTGATGTTGTGAGAA+TGG | 0.508602 | 3.1:+20333051 | None:intergenic |
| TGATATGGTGGTGGTTGTGG+TGG | 0.513282 | 3.1:+20333150 | None:intergenic |
| AATTTGCAAGATATTATTAG+TGG | 0.515902 | 3.1:-20332728 | MS.gene79058:CDS |
| TCCTTATCTTTATTCCACTC+AGG | 0.519893 | 3.1:+20332557 | None:intergenic |
| TTGTGTTTGAATGAGATAAG+AGG | 0.520933 | 3.1:+20333124 | None:intergenic |
| TGCTGCTGCTGTTAAGGTGG+TGG | 0.525546 | 3.1:+20333087 | None:intergenic |
| TCCTGAGTGGAATAAAGATA+AGG | 0.526998 | 3.1:-20332558 | MS.gene79058:CDS |
| GTGCCGTAGTAGAGATTGTA+GGG | 0.548540 | 3.1:+20333007 | None:intergenic |
| TGCTGCTGCTGCTGTTAAGG+TGG | 0.548707 | 3.1:+20333084 | None:intergenic |
| GAGGAGGAGGAGAAAATGGG+TGG | 0.548714 | 3.1:+20333193 | None:intergenic |
| GCAGCAAGTGCAGCAAACTA+CGG | 0.563093 | 3.1:-20332983 | MS.gene79058:CDS |
| TCTACGACGTTCCAGAAGGT+TGG | 0.565732 | 3.1:-20332916 | MS.gene79058:CDS |
| GAGGAGGAGAAAATGGGTGG+TGG | 0.570174 | 3.1:+20333196 | None:intergenic |
| GCAAACTACGGCGGCTACGG+CGG | 0.573351 | 3.1:-20332971 | MS.gene79058:CDS |
| GATGATTCTGCTGCTATGGA+AGG | 0.583786 | 3.1:+20333031 | None:intergenic |
| CGACGTTCCAGAAGGTTGGA+AGG | 0.585452 | 3.1:-20332912 | MS.gene79058:CDS |
| TCTCCCTACAATCTCTACTA+CGG | 0.599583 | 3.1:-20333010 | MS.gene79058:CDS |
| GCAAGTGCAGCAAACTACGG+CGG | 0.619443 | 3.1:-20332980 | MS.gene79058:CDS |
| TACATCTACGACGTTCCAGA+AGG | 0.628307 | 3.1:-20332920 | MS.gene79058:CDS |
| CTAACTGACGAAACCCAGAA+AGG | 0.634618 | 3.1:+20332795 | None:intergenic |
| TTAATGCTCCTACTCCTGAG+TGG | 0.644053 | 3.1:-20332571 | MS.gene79058:CDS |
| GATTCTGCTGCTATGGAAGG+TGG | 0.667537 | 3.1:+20333034 | None:intergenic |
| TGGTGATGTTGTGAGAATGG+TGG | 0.683595 | 3.1:+20333054 | None:intergenic |
| TGGTGATGATGAGAAAATTG+TGG | 0.687506 | 3.1:+20333216 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATATCAAAAGTAGAAAA+AGG | - | chr3.1:20332850-20332869 | MS.gene79058:CDS | 15.0% |
| !! | AATTTGCAAGATATTATTAG+TGG | - | chr3.1:20333006-20333025 | MS.gene79058:CDS | 20.0% |
| !! | TATTATGTTTATGAGATTGA+TGG | - | chr3.1:20333078-20333097 | MS.gene79058:CDS | 20.0% |
| ! | AATATCTAACTTTCCTTTCT+GGG | - | chr3.1:20332926-20332945 | MS.gene79058:CDS | 25.0% |
| !! | AAAGTAGAAAAAGGTACAAA+TGG | - | chr3.1:20332859-20332878 | MS.gene79058:CDS | 25.0% |
| GAAGAAGTGAAAGATGATAA+AGG | - | chr3.1:20333048-20333067 | MS.gene79058:CDS | 30.0% | |
| GAATATCTAACTTTCCTTTC+TGG | - | chr3.1:20332925-20332944 | MS.gene79058:CDS | 30.0% | |
| TTGTGTTTGAATGAGATAAG+AGG | + | chr3.1:20332613-20332632 | None:intergenic | 30.0% | |
| ! | TCTTTCTCTGTTCTTTTCTT+TGG | + | chr3.1:20332907-20332926 | None:intergenic | 30.0% |
| !! | TGAGATAAGAGGTTTTGATA+TGG | + | chr3.1:20332602-20332621 | None:intergenic | 30.0% |
| TCCTGAGTGGAATAAAGATA+AGG | - | chr3.1:20333176-20333195 | MS.gene79058:CDS | 35.0% | |
| TCCTTATCTTTATTCCACTC+AGG | + | chr3.1:20333180-20333199 | None:intergenic | 35.0% | |
| ! | TGGTGATGATGAGAAAATTG+TGG | + | chr3.1:20332521-20332540 | None:intergenic | 35.0% |
| !! | GATAAGAGGTTTTGATATGG+TGG | + | chr3.1:20332599-20332618 | None:intergenic | 35.0% |
| TCTCCCTACAATCTCTACTA+CGG | - | chr3.1:20332724-20332743 | MS.gene79058:CDS | 40.0% | |
| TCTTTATTCCACTCAGGAGT+AGG | + | chr3.1:20333174-20333193 | None:intergenic | 40.0% | |
| TTCTGCTGAGTCTTTCTTGT+TGG | + | chr3.1:20332794-20332813 | None:intergenic | 40.0% | |
| ! | GTTAAGGTGGTGGTTATTAG+AGG | + | chr3.1:20332640-20332659 | None:intergenic | 40.0% |
| ! | TTGTTCAAGACAGCGTCTTT+TGG | + | chr3.1:20332967-20332986 | None:intergenic | 40.0% |
| !! | AAGAGGTTTTGATATGGTGG+TGG | + | chr3.1:20332596-20332615 | None:intergenic | 40.0% |
| !!! | TTTTGATATGGTGGTGGTTG+TGG | + | chr3.1:20332590-20332609 | None:intergenic | 40.0% |
| AAACGTTCCTTCCAACCTTC+TGG | + | chr3.1:20332832-20332851 | None:intergenic | 45.0% | |
| CTAACTGACGAAACCCAGAA+AGG | + | chr3.1:20332942-20332961 | None:intergenic | 45.0% | |
| GATGATTCTGCTGCTATGGA+AGG | + | chr3.1:20332706-20332725 | None:intergenic | 45.0% | |
| GTGCCGTAGTAGAGATTGTA+GGG | + | chr3.1:20332730-20332749 | None:intergenic | 45.0% | |
| TACATCTACGACGTTCCAGA+AGG | - | chr3.1:20332814-20332833 | MS.gene79058:CDS | 45.0% | |
| TGTGCCGTAGTAGAGATTGT+AGG | + | chr3.1:20332731-20332750 | None:intergenic | 45.0% | |
| TTAATGCTCCTACTCCTGAG+TGG | - | chr3.1:20333163-20333182 | MS.gene79058:CDS | 45.0% | |
| ! | AGGTGGTGATGTTGTGAGAA+TGG | + | chr3.1:20332686-20332705 | None:intergenic | 45.0% |
| ! | TGGTGATGTTGTGAGAATGG+TGG | + | chr3.1:20332683-20332702 | None:intergenic | 45.0% |
| GATTCTGCTGCTATGGAAGG+TGG | + | chr3.1:20332703-20332722 | None:intergenic | 50.0% | |
| GCAGCAAGTGCAGCAAACTA+CGG | - | chr3.1:20332751-20332770 | MS.gene79058:CDS | 50.0% | |
| GGGAGATGATTCTGCTGCTA+TGG | + | chr3.1:20332710-20332729 | None:intergenic | 50.0% | |
| GTGGAGGAGGAGGAGAAAAT+GGG | + | chr3.1:20332547-20332566 | None:intergenic | 50.0% | |
| TCTACGACGTTCCAGAAGGT+TGG | - | chr3.1:20332818-20332837 | MS.gene79058:CDS | 50.0% | |
| !! | TGATATGGTGGTGGTTGTGG+TGG | + | chr3.1:20332587-20332606 | None:intergenic | 50.0% |
| AGCTGCTGCTGCTGCTGTTA+AGG | + | chr3.1:20332656-20332675 | None:intergenic | 55.0% | |
| CGACGTTCCAGAAGGTTGGA+AGG | - | chr3.1:20332822-20332841 | MS.gene79058:CDS | 55.0% | |
| GAGGAGGAGAAAATGGGTGG+TGG | + | chr3.1:20332541-20332560 | None:intergenic | 55.0% | |
| GAGGAGGAGGAGAAAATGGG+TGG | + | chr3.1:20332544-20332563 | None:intergenic | 55.0% | |
| GCAAGTGCAGCAAACTACGG+CGG | - | chr3.1:20332754-20332773 | MS.gene79058:CDS | 55.0% | |
| GGTGGAGGAGGAGGAGAAAA+TGG | + | chr3.1:20332548-20332567 | None:intergenic | 55.0% | |
| GGTGGTTGTGGTGGTTGTTG+TGG | + | chr3.1:20332578-20332597 | None:intergenic | 55.0% | |
| GGTTGTGGTGGTTGTTGTGG+TGG | + | chr3.1:20332575-20332594 | None:intergenic | 55.0% | |
| TGCTGCTGCTGCTGTTAAGG+TGG | + | chr3.1:20332653-20332672 | None:intergenic | 55.0% | |
| TGCTGCTGCTGTTAAGGTGG+TGG | + | chr3.1:20332650-20332669 | None:intergenic | 55.0% | |
| GCAGCAAACTACGGCGGCTA+CGG | - | chr3.1:20332760-20332779 | MS.gene79058:CDS | 60.0% | |
| ! | GGTGGTTGTTGTGGTGGTGC+TGG | + | chr3.1:20332569-20332588 | None:intergenic | 60.0% |
| ! | GGTTGTTGTGGTGGTGCTGG+TGG | + | chr3.1:20332566-20332585 | None:intergenic | 60.0% |
| !! | TGTTGTGGTGGTGCTGGTGG+AGG | + | chr3.1:20332563-20332582 | None:intergenic | 60.0% |
| GCAAACTACGGCGGCTACGG+CGG | - | chr3.1:20332763-20332782 | MS.gene79058:CDS | 65.0% | |
| !! | TGTGGTGGTGCTGGTGGAGG+AGG | + | chr3.1:20332560-20332579 | None:intergenic | 65.0% |
| !! | GGTGGTGCTGGTGGAGGAGG+AGG | + | chr3.1:20332557-20332576 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 20332514 | 20333242 | 20332514 | ID=MS.gene79058 |
| chr3.1 | mRNA | 20332514 | 20333242 | 20332514 | ID=MS.gene79058.t1;Parent=MS.gene79058 |
| chr3.1 | exon | 20332514 | 20333242 | 20332514 | ID=MS.gene79058.t1.exon1;Parent=MS.gene79058.t1 |
| chr3.1 | CDS | 20332514 | 20333242 | 20332514 | ID=cds.MS.gene79058.t1;Parent=MS.gene79058.t1 |
| Gene Sequence |
| Protein sequence |
