Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0239490 | XP_003594309.1 | 88.587 | 184 | 3 | 1 | 1 | 184 | 1 | 166 | 1.58e-107 | 315 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0239490 | sp|Q9FIK8|CAR11_ARATH | 63.043 | 184 | 50 | 1 | 1 | 184 | 1 | 166 | 7.40e-78 | 232 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0239490 | B7FKB0 | 88.587 | 184 | 3 | 1 | 1 | 184 | 1 | 166 | 7.53e-108 | 315 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004060 | Msa0239490 | 0.802515 | 5.408309e-49 | -8.615850e-47 |
| Msa0006880 | Msa0239490 | 0.825204 | 5.325493e-54 | -8.615850e-47 |
| Msa0015140 | Msa0239490 | 0.825285 | 5.093989e-54 | -8.615850e-47 |
| Msa0015460 | Msa0239490 | 0.816488 | 5.388407e-52 | -8.615850e-47 |
| Msa0033880 | Msa0239490 | 0.813261 | 2.798914e-51 | -8.615850e-47 |
| Msa0037160 | Msa0239490 | 0.835077 | 2.069975e-56 | -8.615850e-47 |
| Msa0043170 | Msa0239490 | 0.813968 | 1.956753e-51 | -8.615850e-47 |
| Msa0055150 | Msa0239490 | 0.819157 | 1.345537e-52 | -8.615850e-47 |
| Msa0057140 | Msa0239490 | 0.809314 | 2.011764e-50 | -8.615850e-47 |
| Msa0090030 | Msa0239490 | 0.816184 | 6.303313e-52 | -8.615850e-47 |
| Msa0094920 | Msa0239490 | 0.811573 | 6.544922e-51 | -8.615850e-47 |
| Msa0097590 | Msa0239490 | 0.818038 | 2.414183e-52 | -8.615850e-47 |
| Msa0097610 | Msa0239490 | 0.815650 | 8.294070e-52 | -8.615850e-47 |
| Msa0099510 | Msa0239490 | 0.819742 | 9.901356e-53 | -8.615850e-47 |
| Msa0108870 | Msa0239490 | 0.824297 | 8.711347e-54 | -8.615850e-47 |
| Msa0109590 | Msa0239490 | 0.804396 | 2.204342e-49 | -8.615850e-47 |
| Msa0115500 | Msa0239490 | 0.817284 | 3.570797e-52 | -8.615850e-47 |
| Msa0127850 | Msa0239490 | 0.802520 | 5.397002e-49 | -8.615850e-47 |
| Msa0131450 | Msa0239490 | 0.817671 | 2.922080e-52 | -8.615850e-47 |
| Msa0135420 | Msa0239490 | 0.814502 | 1.491168e-51 | -8.615850e-47 |
| Msa0138160 | Msa0239490 | 0.818795 | 1.626979e-52 | -8.615850e-47 |
| Msa0140520 | Msa0239490 | -0.801756 | 7.750161e-49 | -8.615850e-47 |
| Msa0145150 | Msa0239490 | 0.800588 | 1.343370e-48 | -8.615850e-47 |
| Msa0146770 | Msa0239490 | 0.808184 | 3.508434e-50 | -8.615850e-47 |
| Msa0155880 | Msa0239490 | 0.805717 | 1.166341e-49 | -8.615850e-47 |
| Msa0174000 | Msa0239490 | 0.807892 | 4.048770e-50 | -8.615850e-47 |
| Msa0177210 | Msa0239490 | 0.831038 | 2.093491e-55 | -8.615850e-47 |
| Msa0177230 | Msa0239490 | 0.805494 | 1.299262e-49 | -8.615850e-47 |
| Msa0182280 | Msa0239490 | 0.816931 | 4.286511e-52 | -8.615850e-47 |
| Msa0185510 | Msa0239490 | 0.819359 | 1.210571e-52 | -8.615850e-47 |
| Msa0186770 | Msa0239490 | 0.808808 | 2.582397e-50 | -8.615850e-47 |
| Msa0208810 | Msa0239490 | 0.859011 | 5.552924e-63 | -8.615850e-47 |
| Msa0217740 | Msa0239490 | 0.816720 | 4.781558e-52 | -8.615850e-47 |
| Msa0227400 | Msa0239490 | 0.814947 | 1.188304e-51 | -8.615850e-47 |
| Msa0236070 | Msa0239490 | 0.800514 | 1.390896e-48 | -8.615850e-47 |
| Msa0239490 | Msa0244930 | 0.803661 | 3.134384e-49 | -8.615850e-47 |
| Msa0239490 | Msa0260210 | 0.804716 | 1.890201e-49 | -8.615850e-47 |
| Msa0239490 | Msa0268090 | 0.814450 | 1.530868e-51 | -8.615850e-47 |
| Msa0239490 | Msa0288730 | 0.829965 | 3.830764e-55 | -8.615850e-47 |
| Msa0239490 | Msa0304290 | 0.801936 | 7.115225e-49 | -8.615850e-47 |
| Msa0239490 | Msa0304330 | 0.807053 | 6.097941e-50 | -8.615850e-47 |
| Msa0239490 | Msa0305890 | 0.815255 | 1.015035e-51 | -8.615850e-47 |
| Msa0239490 | Msa0308220 | 0.813103 | 3.032668e-51 | -8.615850e-47 |
| Msa0239490 | Msa0320610 | 0.801606 | 8.316425e-49 | -8.615850e-47 |
| Msa0239490 | Msa0340810 | 0.814901 | 1.216367e-51 | -8.615850e-47 |
| Msa0239490 | Msa0349700 | 0.810428 | 1.158329e-50 | -8.615850e-47 |
| Msa0239490 | Msa0371250 | 0.806272 | 8.917703e-50 | -8.615850e-47 |
| Msa0239490 | Msa0385490 | 0.815755 | 7.857949e-52 | -8.615850e-47 |
| Msa0239490 | Msa0419520 | 0.829852 | 4.082387e-55 | -8.615850e-47 |
| Msa0239490 | Msa0437400 | 0.813908 | 2.016864e-51 | -8.615850e-47 |
| Msa0239490 | Msa0444080 | 0.806928 | 6.483018e-50 | -8.615850e-47 |
| Msa0239490 | Msa0465550 | 0.826053 | 3.349635e-54 | -8.615850e-47 |
| Msa0239490 | Msa0491540 | 0.810360 | 1.198284e-50 | -8.615850e-47 |
| Msa0239490 | Msa0505380 | 0.801036 | 1.088012e-48 | -8.615850e-47 |
| Msa0239490 | Msa0511490 | 0.814165 | 1.770536e-51 | -8.615850e-47 |
| Msa0239490 | Msa0527910 | 0.843668 | 1.216313e-58 | -8.615850e-47 |
| Msa0239490 | Msa0530100 | 0.821064 | 4.924383e-53 | -8.615850e-47 |
| Msa0239490 | Msa0546570 | 0.836222 | 1.062114e-56 | -8.615850e-47 |
| Msa0239490 | Msa0556790 | 0.808782 | 2.614628e-50 | -8.615850e-47 |
| Msa0239490 | Msa0562940 | 0.803415 | 3.524541e-49 | -8.615850e-47 |
| Msa0239490 | Msa0578090 | 0.811411 | 7.095676e-51 | -8.615850e-47 |
| Msa0239490 | Msa0586850 | 0.826818 | 2.202162e-54 | -8.615850e-47 |
| Msa0239490 | Msa0597000 | 0.802015 | 6.856240e-49 | -8.615850e-47 |
| Msa0239490 | Msa0602370 | 0.805876 | 1.080441e-49 | -8.615850e-47 |
| Msa0239490 | Msa0603670 | 0.841131 | 5.724044e-58 | -8.615850e-47 |
| Msa0239490 | Msa0603750 | 0.809886 | 1.515775e-50 | -8.615850e-47 |
| Msa0239490 | Msa0609000 | 0.809184 | 2.144835e-50 | -8.615850e-47 |
| Msa0239490 | Msa0619920 | 0.837751 | 4.320604e-57 | -8.615850e-47 |
| Msa0239490 | Msa0620620 | 0.811258 | 7.658755e-51 | -8.615850e-47 |
| Msa0239490 | Msa0626680 | 0.811023 | 8.611594e-51 | -8.615850e-47 |
| Msa0239490 | Msa0651150 | 0.809349 | 1.977637e-50 | -8.615850e-47 |
| Msa0239490 | Msa0659990 | 0.805547 | 1.266606e-49 | -8.615850e-47 |
| Msa0239490 | Msa0664760 | 0.809997 | 1.434796e-50 | -8.615850e-47 |
| Msa0239490 | Msa0677770 | 0.812055 | 5.140453e-51 | -8.615850e-47 |
| Msa0239490 | Msa0682090 | 0.839948 | 1.167394e-57 | -8.615850e-47 |
| Msa0239490 | Msa0682140 | 0.837954 | 3.830654e-57 | -8.615850e-47 |
| Msa0239490 | Msa0683600 | 0.800776 | 1.230003e-48 | -8.615850e-47 |
| Msa0239490 | Msa0691900 | 0.805688 | 1.183126e-49 | -8.615850e-47 |
| Msa0239490 | Msa0694840 | 0.808454 | 3.072563e-50 | -8.615850e-47 |
| Msa0239490 | Msa0703910 | 0.801404 | 9.150072e-49 | -8.615850e-47 |
| Msa0239490 | Msa0706390 | 0.805828 | 1.105423e-49 | -8.615850e-47 |
| Msa0239490 | Msa0706400 | 0.811914 | 5.515482e-51 | -8.615850e-47 |
| Msa0239490 | Msa0774750 | 0.809792 | 1.588391e-50 | -8.615850e-47 |
| Msa0239490 | Msa0781270 | 0.808769 | 2.631414e-50 | -8.615850e-47 |
| Msa0239490 | Msa0791820 | 0.814777 | 1.295867e-51 | -8.615850e-47 |
| Msa0239490 | Msa0793390 | 0.815646 | 8.307741e-52 | -8.615850e-47 |
| Msa0239490 | Msa0812290 | 0.804231 | 2.385228e-49 | -8.615850e-47 |
| Msa0239490 | Msa0821220 | 0.803093 | 4.109911e-49 | -8.615850e-47 |
| Msa0239490 | Msa0826760 | 0.802804 | 4.715682e-49 | -8.615850e-47 |
| Msa0239490 | Msa0837650 | 0.805363 | 1.384217e-49 | -8.615850e-47 |
| Msa0239490 | Msa0849810 | 0.808227 | 3.434418e-50 | -8.615850e-47 |
| Msa0239490 | Msa0895310 | 0.850732 | 1.403971e-60 | -8.615850e-47 |
| Msa0239490 | Msa0901320 | 0.810754 | 9.847285e-51 | -8.615850e-47 |
| Msa0239490 | Msa0922030 | 0.849314 | 3.500249e-60 | -8.615850e-47 |
| Msa0239490 | Msa0925770 | 0.804751 | 1.859035e-49 | -8.615850e-47 |
| Msa0239490 | Msa0933290 | 0.807976 | 3.885832e-50 | -8.615850e-47 |
| Msa0239490 | Msa0937330 | 0.823925 | 1.064995e-53 | -8.615850e-47 |
| Msa0239490 | Msa0960380 | 0.805009 | 1.641258e-49 | -8.615850e-47 |
| Msa0239490 | Msa0994390 | 0.822201 | 2.688815e-53 | -8.615850e-47 |
| Msa0239490 | Msa1001350 | 0.801813 | 7.543084e-49 | -8.615850e-47 |
| Msa0239490 | Msa1025260 | 0.809170 | 2.159550e-50 | -8.615850e-47 |
| Msa0239490 | Msa1025940 | 0.804393 | 2.207251e-49 | -8.615850e-47 |
| Msa0239490 | Msa1040800 | 0.809305 | 2.020543e-50 | -8.615850e-47 |
| Msa0239490 | Msa1083880 | 0.809711 | 1.653175e-50 | -8.615850e-47 |
| Msa0239490 | Msa1089840 | 0.805532 | 1.275888e-49 | -8.615850e-47 |
| Msa0239490 | Msa1093330 | 0.801756 | 7.747001e-49 | -8.615850e-47 |
| Msa0239490 | Msa1103660 | -0.806689 | 7.282531e-50 | -8.615850e-47 |
| Msa0239490 | Msa1105500 | 0.803984 | 2.685268e-49 | -8.615850e-47 |
| Msa0239490 | Msa1109350 | 0.802450 | 5.577412e-49 | -8.615850e-47 |
| Msa0239490 | Msa1152520 | 0.800115 | 1.676735e-48 | -8.615850e-47 |
| Msa0239490 | Msa1164020 | 0.809554 | 1.786789e-50 | -8.615850e-47 |
| Msa0239490 | Msa1176360 | 0.800906 | 1.156734e-48 | -8.615850e-47 |
| Msa0239490 | Msa1206310 | 0.806432 | 8.249570e-50 | -8.615850e-47 |
| Msa0239490 | Msa1226610 | 0.802562 | 5.288863e-49 | -8.615850e-47 |
| Msa0239490 | Msa1269300 | 0.803101 | 4.093596e-49 | -8.615850e-47 |
| Msa0239490 | Msa1280620 | 0.839372 | 1.648247e-57 | -8.615850e-47 |
| Msa0239490 | Msa1282240 | 0.801097 | 1.057503e-48 | -8.615850e-47 |
| Msa0239490 | Msa1294960 | 0.824418 | 8.160845e-54 | -8.615850e-47 |
| Msa0239490 | Msa1317270 | 0.819924 | 8.993200e-53 | -8.615850e-47 |
| Msa0239490 | Msa1363700 | 0.804152 | 2.477470e-49 | -8.615850e-47 |
| Msa0239490 | Msa1371090 | 0.830930 | 2.224865e-55 | -8.615850e-47 |
| Msa0239490 | Msa1418920 | 0.804133 | 2.500216e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0239490 | MtrunA17_Chr2g0290631 | 88.587 | 184 | 3 | 1 | 1 | 184 | 1 | 166 | 1.45e-111 | 315 |
| Msa0239490 | MtrunA17_Chr8g0380381 | 42.541 | 181 | 73 | 3 | 1 | 175 | 85 | 240 | 6.23e-38 | 130 |
| Msa0239490 | MtrunA17_Chr3g0111361 | 39.429 | 175 | 86 | 2 | 1 | 175 | 1 | 155 | 5.69e-35 | 120 |
| Msa0239490 | MtrunA17_Chr2g0280981 | 38.596 | 171 | 85 | 2 | 5 | 175 | 4 | 154 | 1.23e-34 | 119 |
| Msa0239490 | MtrunA17_Chr2g0292461 | 41.143 | 175 | 84 | 2 | 1 | 175 | 168 | 323 | 3.06e-33 | 120 |
| Msa0239490 | MtrunA17_Chr6g0478401 | 37.143 | 175 | 90 | 4 | 1 | 175 | 13 | 167 | 2.06e-32 | 114 |
| Msa0239490 | MtrunA17_Chr8g0393081 | 38.286 | 175 | 88 | 2 | 1 | 175 | 17 | 171 | 2.23e-32 | 114 |
| Msa0239490 | MtrunA17_Chr8g0352751 | 40.571 | 175 | 85 | 3 | 1 | 175 | 1 | 156 | 9.13e-32 | 112 |
| Msa0239490 | MtrunA17_Chr3g0083541 | 41.714 | 175 | 83 | 2 | 1 | 175 | 239 | 394 | 1.92e-31 | 117 |
| Msa0239490 | MtrunA17_Chr4g0043861 | 35.294 | 170 | 90 | 3 | 1 | 170 | 1 | 150 | 7.54e-27 | 100 |
| Msa0239490 | MtrunA17_Chr1g0160811 | 38.922 | 167 | 81 | 4 | 5 | 170 | 6 | 152 | 1.10e-26 | 99.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0239490 | AT5G47710.1 | 63.043 | 184 | 50 | 1 | 1 | 184 | 1 | 166 | 7.52e-79 | 232 |
| Msa0239490 | AT5G47710.2 | 63.043 | 184 | 50 | 1 | 1 | 184 | 1 | 166 | 7.52e-79 | 232 |
| Msa0239490 | AT5G47710.3 | 63.043 | 184 | 50 | 1 | 1 | 184 | 1 | 166 | 7.52e-79 | 232 |
| Msa0239490 | AT5G47710.4 | 63.043 | 184 | 50 | 1 | 1 | 184 | 1 | 166 | 7.52e-79 | 232 |
| Msa0239490 | AT1G73580.1 | 40.000 | 175 | 85 | 4 | 1 | 175 | 4 | 158 | 1.12e-35 | 123 |
| Msa0239490 | AT1G70790.3 | 41.379 | 174 | 82 | 3 | 5 | 177 | 6 | 160 | 2.21e-35 | 122 |
| Msa0239490 | AT1G70790.2 | 41.379 | 174 | 82 | 3 | 5 | 177 | 6 | 160 | 2.21e-35 | 122 |
| Msa0239490 | AT1G70790.1 | 41.379 | 174 | 82 | 3 | 5 | 177 | 6 | 160 | 2.21e-35 | 122 |
| Msa0239490 | AT3G17980.1 | 40.000 | 175 | 85 | 4 | 1 | 175 | 13 | 167 | 3.85e-35 | 122 |
| Msa0239490 | AT1G66360.1 | 36.571 | 175 | 93 | 2 | 1 | 175 | 1 | 157 | 1.01e-33 | 118 |
| Msa0239490 | AT2G01540.1 | 40.116 | 172 | 83 | 4 | 5 | 175 | 6 | 158 | 2.01e-33 | 117 |
| Msa0239490 | AT5G37740.1 | 38.636 | 176 | 89 | 3 | 1 | 175 | 1 | 158 | 2.91e-33 | 117 |
| Msa0239490 | AT4G05330.2 | 40.571 | 175 | 85 | 2 | 1 | 175 | 140 | 295 | 4.95e-33 | 119 |
| Msa0239490 | AT1G48590.4 | 38.286 | 175 | 88 | 4 | 1 | 175 | 6 | 160 | 1.84e-32 | 114 |
| Msa0239490 | AT1G48590.1 | 38.286 | 175 | 88 | 4 | 1 | 175 | 6 | 160 | 1.84e-32 | 114 |
| Msa0239490 | AT4G05330.3 | 40.571 | 175 | 85 | 2 | 1 | 175 | 175 | 330 | 2.08e-32 | 119 |
| Msa0239490 | AT4G05330.1 | 40.571 | 175 | 85 | 2 | 1 | 175 | 175 | 330 | 2.08e-32 | 119 |
| Msa0239490 | AT1G70810.1 | 37.143 | 175 | 90 | 3 | 1 | 175 | 1 | 155 | 2.38e-32 | 114 |
| Msa0239490 | AT4G21160.2 | 39.429 | 175 | 87 | 2 | 1 | 175 | 176 | 331 | 2.45e-32 | 119 |
| Msa0239490 | AT4G21160.3 | 39.429 | 175 | 87 | 2 | 1 | 175 | 176 | 331 | 2.45e-32 | 119 |
| Msa0239490 | AT4G21160.1 | 39.429 | 175 | 87 | 2 | 1 | 175 | 176 | 331 | 2.45e-32 | 119 |
| Msa0239490 | AT4G21160.4 | 39.429 | 175 | 87 | 2 | 1 | 175 | 176 | 331 | 2.45e-32 | 119 |
| Msa0239490 | AT1G48590.2 | 38.286 | 175 | 88 | 4 | 1 | 175 | 37 | 191 | 3.74e-32 | 115 |
| Msa0239490 | AT3G07940.1 | 42.857 | 175 | 81 | 3 | 1 | 175 | 224 | 379 | 1.82e-31 | 117 |
| Msa0239490 | AT5G37740.2 | 36.559 | 186 | 89 | 4 | 1 | 175 | 1 | 168 | 6.54e-30 | 108 |
| Msa0239490 | AT1G23140.1 | 34.857 | 175 | 94 | 3 | 1 | 175 | 1 | 155 | 1.47e-29 | 107 |
| Msa0239490 | AT1G70800.1 | 33.143 | 175 | 97 | 2 | 1 | 175 | 10 | 164 | 1.88e-27 | 102 |
| Msa0239490 | AT1G70790.4 | 37.410 | 139 | 67 | 3 | 40 | 177 | 4 | 123 | 1.50e-22 | 88.6 |
| Msa0239490 | AT1G48590.3 | 37.755 | 98 | 59 | 2 | 78 | 175 | 64 | 159 | 6.73e-14 | 66.6 |
Find 65 sgRNAs with CRISPR-Local
Find 127 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATGAAAAGTTGTGATTTA+TGG | 0.068719 | 2_2:+13949214 | Msa0239490:three_prime_UTR |
| CCTTATGTTGTTCTCAAATT+AGG | 0.114099 | 2_2:+13947909 | Msa0239490:CDS |
| ATTTACAATGCCTTGTTTAT+TGG | 0.182577 | 2_2:+13948310 | Msa0239490:CDS |
| TTATTGAGTATGAGAATTTA+TGG | 0.197734 | 2_2:-13946951 | None:intergenic |
| TTTGAAAGCTGATGACAAAA+TGG | 0.206431 | 2_2:+13948772 | Msa0239490:CDS |
| AGTTCTAATTGCATAGGTTT+AGG | 0.235916 | 2_2:+13949362 | Msa0239490:three_prime_UTR |
| GTTGTGATTTATGGCTTCTT+TGG | 0.237716 | 2_2:+13949223 | Msa0239490:three_prime_UTR |
| GTTCTAATTGCATAGGTTTA+GGG | 0.287937 | 2_2:+13949363 | Msa0239490:three_prime_UTR |
| ATTATAATGAGTGAACAATT+AGG | 0.300153 | 2_2:+13947822 | Msa0239490:exon |
| ACCCTTGGGAGTTCTCAATT+TGG | 0.326299 | 2_2:+13948274 | Msa0239490:CDS |
| TGTTCTCAAATTAGGAAATC+AGG | 0.369709 | 2_2:+13947917 | Msa0239490:CDS |
| CTTCCGGTGAGCAAACATTA+AGG | 0.379148 | 2_2:+13948861 | Msa0239490:CDS |
| TGATATTCTTCATTATTCAT+TGG | 0.379519 | 2_2:+13946993 | Msa0239490:five_prime_UTR |
| CAAGTCTCTCTTATCTAATC+AGG | 0.383397 | 2_2:-13949178 | None:intergenic |
| CCTAATTTGAGAACAACATA+AGG | 0.397853 | 2_2:-13947909 | None:intergenic |
| GTTTATTGGTCTTTAATGCT+TGG | 0.403292 | 2_2:+13948324 | Msa0239490:CDS |
| GCGCGGTTGTGCAGAATGTT+TGG | 0.408048 | 2_2:+13948945 | Msa0239490:CDS |
| ATAGCTGTTTGAATCCGGTT+TGG | 0.419279 | 2_2:+13948222 | Msa0239490:CDS |
| AAGGGAAAAGGTTGGTGATC+CGG | 0.421394 | 2_2:+13947868 | Msa0239490:CDS |
| TTGAAAGCTGATGACAAAAT+GGG | 0.427442 | 2_2:+13948773 | Msa0239490:CDS |
| AGCAGTATCAATTGTGTTAA+CGG | 0.427721 | 2_2:+13948923 | Msa0239490:CDS |
| TAAATTGCATTATAATATGC+AGG | 0.429332 | 2_2:-13949152 | None:intergenic |
| CATTAATAGCTGTTTGAATC+CGG | 0.434724 | 2_2:+13948217 | Msa0239490:CDS |
| TTATAATGAGTGAACAATTA+GGG | 0.440831 | 2_2:+13947823 | Msa0239490:exon |
| TTTCTCTTTGACAGAACCCT+TGG | 0.442241 | 2_2:+13948259 | Msa0239490:CDS |
| TTCAGCTCTTCATTCCAAAC+CGG | 0.443481 | 2_2:-13948236 | None:intergenic |
| TTGTGCAGAATGTTTGGTTA+AGG | 0.448350 | 2_2:+13948951 | Msa0239490:CDS |
| AATCTAGCTGCAGAGACTAA+TGG | 0.452322 | 2_2:-13948818 | None:intergenic |
| TGAGAATTTATGGAAGGGAT+TGG | 0.458155 | 2_2:-13946941 | None:intergenic |
| TTCTCTTTGACAGAACCCTT+GGG | 0.470160 | 2_2:+13948260 | Msa0239490:CDS |
| AGGGAAAAGGTTGGTGATCC+GGG | 0.470972 | 2_2:+13947869 | Msa0239490:CDS |
| CTGCAGAGACTAATGGTTGA+AGG | 0.477932 | 2_2:-13948811 | None:intergenic |
| CAAACAGCTATTAATGACCT+TGG | 0.491295 | 2_2:-13948210 | None:intergenic |
| GAGTGTCAATTCTATCTCTC+CGG | 0.491542 | 2_2:-13948990 | None:intergenic |
| ATTGGTCTTTAATGCTTGGA+AGG | 0.504518 | 2_2:+13948328 | Msa0239490:CDS |
| TCATAGTTGTGCAAGGGAAA+AGG | 0.522477 | 2_2:+13947856 | Msa0239490:CDS |
| GATCACTGGTCTTGAAATCC+CGG | 0.525136 | 2_2:-13947887 | None:intergenic |
| GAATTTATGGAAGGGATTGG+TGG | 0.528275 | 2_2:-13946938 | None:intergenic |
| CTTCCTTAATGTTTGCTCAC+CGG | 0.528914 | 2_2:-13948864 | None:intergenic |
| TGAGTATGAGAATTTATGGA+AGG | 0.531353 | 2_2:-13946947 | None:intergenic |
| CTATTAAGGAAGTTGAGTAA+AGG | 0.538682 | 2_2:+13949402 | Msa0239490:three_prime_UTR |
| CTTTGACCACCTGTAGCTGC+AGG | 0.552730 | 2_2:+13946888 | Msa0239490:five_prime_UTR |
| CAATTAGAACTCATTAATCA+AGG | 0.553464 | 2_2:-13949350 | None:intergenic |
| TTAATGAGTTCTAATTGCAT+AGG | 0.556403 | 2_2:+13949356 | Msa0239490:three_prime_UTR |
| GAGAACAACATAAGGATCAC+TGG | 0.556443 | 2_2:-13947901 | None:intergenic |
| GAGTATGAGAATTTATGGAA+GGG | 0.556791 | 2_2:-13946946 | None:intergenic |
| AAATTGCATTATAATATGCA+GGG | 0.557931 | 2_2:-13949151 | None:intergenic |
| AGGCTTCGCGAAGTAGAATC+CGG | 0.566418 | 2_2:+13948971 | Msa0239490:CDS |
| TGAACAATTAGGGCAGCTAA+AGG | 0.572900 | 2_2:+13947833 | Msa0239490:CDS |
| TTCTAATTGCATAGGTTTAG+GGG | 0.585355 | 2_2:+13949364 | Msa0239490:three_prime_UTR |
| CGGTGAGCAAACATTAAGGA+AGG | 0.588349 | 2_2:+13948865 | Msa0239490:CDS |
| CTAAAGGTCATAGTTGTGCA+AGG | 0.591043 | 2_2:+13947849 | Msa0239490:CDS |
| GTTACTTCAAAATAGTGCGG+AGG | 0.600202 | 2_2:+13949031 | Msa0239490:exon |
| AACAAGGCATTGTAAATGTG+AGG | 0.602531 | 2_2:-13948304 | None:intergenic |
| CACCAAATTGAGAACTCCCA+AGG | 0.603264 | 2_2:-13948276 | None:intergenic |
| TTACTTCAAAATAGTGCGGA+GGG | 0.606950 | 2_2:+13949032 | Msa0239490:exon |
| CTGCAGCTACAGGTGGTCAA+AGG | 0.607125 | 2_2:-13946887 | Msa0239480:intron |
| TAAAGGTCATAGTTGTGCAA+GGG | 0.629000 | 2_2:+13947850 | Msa0239490:CDS |
| TTGGTGGAACATGAAGAAGC+AGG | 0.632456 | 2_2:-13946922 | None:intergenic |
| AGTTGTGCAAGGGAAAAGGT+TGG | 0.639430 | 2_2:+13947860 | Msa0239490:CDS |
| ACCAAATTGAGAACTCCCAA+GGG | 0.650902 | 2_2:-13948275 | None:intergenic |
| GTTGTTACTTCAAAATAGTG+CGG | 0.654566 | 2_2:+13949028 | Msa0239490:exon |
| GTAACAGACTGCAAAGACCA+AGG | 0.673690 | 2_2:+13948193 | Msa0239490:intron |
| GCATTAAAGACCAATAAACA+AGG | 0.695265 | 2_2:-13948320 | None:intergenic |
| TATCAATTGTGTTAACGGCG+CGG | 0.708048 | 2_2:+13948928 | Msa0239490:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGATAATTCAATTAAATAA+TGG | - | chr2_2:13947246-13947265 | None:intergenic | 10.0% |
| !!! | ATTCAATTAAATAATGGATA+TGG | - | chr2_2:13947240-13947259 | None:intergenic | 15.0% |
| !!! | TGATTAATTATTTAACTTGT+TGG | + | chr2_2:13947794-13947813 | Msa0239490:intron | 15.0% |
| !!! | TATTATTTCATTTTCATCTT+AGG | + | chr2_2:13947951-13947970 | Msa0239490:intron | 15.0% |
| !!! | TATTTTTGTATTGACTATTA+AGG | + | chr2_2:13949388-13949407 | Msa0239490:three_prime_UTR | 15.0% |
| !! | TTATTGAGTATGAGAATTTA+TGG | - | chr2_2:13946954-13946973 | None:intergenic | 20.0% |
| !! | TGATATTCTTCATTATTCAT+TGG | + | chr2_2:13946993-13947012 | Msa0239490:five_prime_UTR | 20.0% |
| !! | TAATGTAGATTTACTTAGTT+AGG | + | chr2_2:13947185-13947204 | Msa0239490:intron | 20.0% |
| !!! | ATAATGGATATGGTAAATAA+TGG | - | chr2_2:13947230-13947249 | None:intergenic | 20.0% |
| !! | CACAAATAAAAAAATGTAGA+GGG | - | chr2_2:13947760-13947779 | None:intergenic | 20.0% |
| !!! | TAATTATTTAACTTGTTGGT+AGG | + | chr2_2:13947798-13947817 | Msa0239490:intron | 20.0% |
| !! | ATTATAATGAGTGAACAATT+AGG | + | chr2_2:13947822-13947841 | Msa0239490:exon | 20.0% |
| !! | TTATAATGAGTGAACAATTA+GGG | + | chr2_2:13947823-13947842 | Msa0239490:exon | 20.0% |
| !! | GAATGAATCATTTAATATTG+AGG | - | chr2_2:13948165-13948184 | None:intergenic | 20.0% |
| !!! | CTTATTTGAGTTTATCTAAT+AGG | + | chr2_2:13948481-13948500 | Msa0239490:intron | 20.0% |
| !!! | TAAGTTATTTCTATAGCAAA+GGG | - | chr2_2:13948626-13948645 | None:intergenic | 20.0% |
| !!! | TTAAGTTATTTCTATAGCAA+AGG | - | chr2_2:13948627-13948646 | None:intergenic | 20.0% |
| !!! | TTTTTTGTTTATATCTGAGA+GGG | + | chr2_2:13948694-13948713 | Msa0239490:intron | 20.0% |
| !! | AAATTGCATTATAATATGCA+GGG | - | chr2_2:13949154-13949173 | None:intergenic | 20.0% |
| !! | TAAATTGCATTATAATATGC+AGG | - | chr2_2:13949155-13949174 | None:intergenic | 20.0% |
| !! | AAATGAAAAGTTGTGATTTA+TGG | + | chr2_2:13949214-13949233 | Msa0239490:three_prime_UTR | 20.0% |
| !!! | ATATGGTAAATAATGGATTC+TGG | - | chr2_2:13947223-13947242 | None:intergenic | 25.0% |
| ! | TTTCTCTACTAGAATATTCA+TGG | + | chr2_2:13947432-13947451 | Msa0239490:intron | 25.0% |
| !! | TGATTTTCATGTAATTTTGC+TGG | + | chr2_2:13947493-13947512 | Msa0239490:intron | 25.0% |
| !!! | TGTTCTTTTTTGTCCTTTTT+GGG | + | chr2_2:13947547-13947566 | Msa0239490:intron | 25.0% |
| !! | ATTTATCTTTTGACCCAAAA+AGG | - | chr2_2:13947563-13947582 | None:intergenic | 25.0% |
| !! | CATTGTATTTTCATTTGTGT+TGG | - | chr2_2:13947736-13947755 | None:intergenic | 25.0% |
| ! | CCACAAATAAAAAAATGTAG+AGG | - | chr2_2:13947761-13947780 | None:intergenic | 25.0% |
| !!! | CCTCTACATTTTTTTATTTG+TGG | + | chr2_2:13947758-13947777 | Msa0239490:intron | 25.0% |
| !!! | ACATTTTTTTATTTGTGGCT+AGG | + | chr2_2:13947763-13947782 | Msa0239490:intron | 25.0% |
| ! | GTTTGTTTATCTTCACATTA+AGG | + | chr2_2:13947973-13947992 | Msa0239490:intron | 25.0% |
| !!! | ATTTACAATGCCTTGTTTAT+TGG | + | chr2_2:13948310-13948329 | Msa0239490:CDS | 25.0% |
| !!! | AGTTGATGTATATTTTACTG+TGG | + | chr2_2:13948357-13948376 | Msa0239490:intron | 25.0% |
| ! | ATATAGTGCATTAAACTCTA+TGG | - | chr2_2:13948411-13948430 | None:intergenic | 25.0% |
| ! | TAATGCACTATATATTAGCT+TGG | + | chr2_2:13948418-13948437 | Msa0239490:intron | 25.0% |
| !! | GTACTCTACATGTTTTATAT+AGG | + | chr2_2:13948444-13948463 | Msa0239490:intron | 25.0% |
| ! | TTATATAGGACTGTTTAGAA+TGG | + | chr2_2:13948458-13948477 | Msa0239490:intron | 25.0% |
| !!! | GTTTTTTGTTTATATCTGAG+AGG | + | chr2_2:13948693-13948712 | Msa0239490:intron | 25.0% |
| ! | TGCAACTCAGTTATAAATAT+AGG | - | chr2_2:13948720-13948739 | None:intergenic | 25.0% |
| ! | CAATTAGAACTCATTAATCA+AGG | - | chr2_2:13949353-13949372 | None:intergenic | 25.0% |
| !! | TTAATGAGTTCTAATTGCAT+AGG | + | chr2_2:13949356-13949375 | Msa0239490:three_prime_UTR | 25.0% |
| GAGTATGAGAATTTATGGAA+GGG | - | chr2_2:13946949-13946968 | None:intergenic | 30.0% | |
| TGAGTATGAGAATTTATGGA+AGG | - | chr2_2:13946950-13946969 | None:intergenic | 30.0% | |
| !!! | CTGTTCTTTTTTGTCCTTTT+TGG | + | chr2_2:13947546-13947565 | Msa0239490:intron | 30.0% |
| AACCAAAAGCAGTAAACAAA+AGG | - | chr2_2:13947617-13947636 | None:intergenic | 30.0% | |
| ! | TGGTACAAATCTTTGAAAAC+AGG | - | chr2_2:13947716-13947735 | None:intergenic | 30.0% |
| CCTAATTTGAGAACAACATA+AGG | - | chr2_2:13947912-13947931 | None:intergenic | 30.0% | |
| CCTTATGTTGTTCTCAAATT+AGG | + | chr2_2:13947909-13947928 | Msa0239490:CDS | 30.0% | |
| TGTTCTCAAATTAGGAAATC+AGG | + | chr2_2:13947917-13947936 | Msa0239490:CDS | 30.0% | |
| CTTCACATTAAGGACATATT+TGG | + | chr2_2:13947983-13948002 | Msa0239490:intron | 30.0% | |
| ATTGCTAAAAAAACACCTGT+TGG | + | chr2_2:13948024-13948043 | Msa0239490:intron | 30.0% | |
| TGCATCTTCTAAGTTTAATG+TGG | - | chr2_2:13948102-13948121 | None:intergenic | 30.0% | |
| CATTAATAGCTGTTTGAATC+CGG | + | chr2_2:13948217-13948236 | Msa0239490:CDS | 30.0% | |
| GCATTAAAGACCAATAAACA+AGG | - | chr2_2:13948323-13948342 | None:intergenic | 30.0% | |
| !! | GTTTATTGGTCTTTAATGCT+TGG | + | chr2_2:13948324-13948343 | Msa0239490:CDS | 30.0% |
| TTGAGTTTATCTAATAGGCT+TGG | + | chr2_2:13948486-13948505 | Msa0239490:intron | 30.0% | |
| AAAGACAATTGTTTCCATAC+AGG | - | chr2_2:13948597-13948616 | None:intergenic | 30.0% | |
| ! | CTGAGTTGCATTTTGAATAT+AGG | + | chr2_2:13948730-13948749 | Msa0239490:intron | 30.0% |
| TTTGAAAGCTGATGACAAAA+TGG | + | chr2_2:13948772-13948791 | Msa0239490:CDS | 30.0% | |
| TTGAAAGCTGATGACAAAAT+GGG | + | chr2_2:13948773-13948792 | Msa0239490:CDS | 30.0% | |
| ! | TACAAGACAATTTTCAGAGT+CGG | - | chr2_2:13948897-13948916 | None:intergenic | 30.0% |
| AGCAGTATCAATTGTGTTAA+CGG | + | chr2_2:13948923-13948942 | Msa0239490:CDS | 30.0% | |
| !!! | CACTATTTTGAAGTAACAAC+AGG | - | chr2_2:13949028-13949047 | None:intergenic | 30.0% |
| ! | GTTGTTACTTCAAAATAGTG+CGG | + | chr2_2:13949028-13949047 | Msa0239490:exon | 30.0% |
| ! | AGTTCTAATTGCATAGGTTT+AGG | + | chr2_2:13949362-13949381 | Msa0239490:three_prime_UTR | 30.0% |
| GTTCTAATTGCATAGGTTTA+GGG | + | chr2_2:13949363-13949382 | Msa0239490:three_prime_UTR | 30.0% | |
| TTCTAATTGCATAGGTTTAG+GGG | + | chr2_2:13949364-13949383 | Msa0239490:three_prime_UTR | 30.0% | |
| CTATTAAGGAAGTTGAGTAA+AGG | + | chr2_2:13949402-13949421 | Msa0239490:three_prime_UTR | 30.0% | |
| TGAGAATTTATGGAAGGGAT+TGG | - | chr2_2:13946944-13946963 | None:intergenic | 35.0% | |
| TAGTTCATCTCTGACATACT+TGG | + | chr2_2:13947117-13947136 | Msa0239490:intron | 35.0% | |
| !! | GTCCTTTTGTTTACTGCTTT+TGG | + | chr2_2:13947612-13947631 | Msa0239490:intron | 35.0% |
| AATCAATGCATTGCATAGAC+AGG | - | chr2_2:13947647-13947666 | None:intergenic | 35.0% | |
| !! | ATGCATTGATTCCTCTCAAA+AGG | + | chr2_2:13947656-13947675 | Msa0239490:intron | 35.0% |
| !! | TGCATTGATTCCTCTCAAAA+GGG | + | chr2_2:13947657-13947676 | Msa0239490:intron | 35.0% |
| ! | GAAACTATTTCCCTTTTGAG+AGG | - | chr2_2:13947670-13947689 | None:intergenic | 35.0% |
| ATGAATAATGTATGCCATGG+TGG | - | chr2_2:13947692-13947711 | None:intergenic | 35.0% | |
| GGAATGAATAATGTATGCCA+TGG | - | chr2_2:13947695-13947714 | None:intergenic | 35.0% | |
| TAAAGGTCATAGTTGTGCAA+GGG | + | chr2_2:13947850-13947869 | Msa0239490:CDS | 35.0% | |
| GACATATTTGGATCAACAGT+GGG | + | chr2_2:13947995-13948014 | Msa0239490:intron | 35.0% | |
| AATACACTTAACATGCCAAC+AGG | - | chr2_2:13948042-13948061 | None:intergenic | 35.0% | |
| CAAACAGCTATTAATGACCT+TGG | - | chr2_2:13948213-13948232 | None:intergenic | 35.0% | |
| !! | AACAAGGCATTGTAAATGTG+AGG | - | chr2_2:13948307-13948326 | None:intergenic | 35.0% |
| !! | ATTGGTCTTTAATGCTTGGA+AGG | + | chr2_2:13948328-13948347 | Msa0239490:CDS | 35.0% |
| ! | GCACTATATATTAGCTTGGA+AGG | + | chr2_2:13948422-13948441 | Msa0239490:intron | 35.0% |
| !! | GACATTTTAAGAGTCTCTTC+CGG | + | chr2_2:13948845-13948864 | Msa0239490:CDS | 35.0% |
| ! | ACAAGACAATTTTCAGAGTC+GGG | - | chr2_2:13948896-13948915 | None:intergenic | 35.0% |
| TTGTGCAGAATGTTTGGTTA+AGG | + | chr2_2:13948951-13948970 | Msa0239490:CDS | 35.0% | |
| !!! | TTTTGAAGTAACAACAGGTG+TGG | - | chr2_2:13949023-13949042 | None:intergenic | 35.0% |
| TTACTTCAAAATAGTGCGGA+GGG | + | chr2_2:13949032-13949051 | Msa0239490:exon | 35.0% | |
| CAAGTCTCTCTTATCTAATC+AGG | - | chr2_2:13949181-13949200 | None:intergenic | 35.0% | |
| GTTGTGATTTATGGCTTCTT+TGG | + | chr2_2:13949223-13949242 | Msa0239490:three_prime_UTR | 35.0% | |
| GAATTTATGGAAGGGATTGG+TGG | - | chr2_2:13946941-13946960 | None:intergenic | 40.0% | |
| AAGGGAAATAGTTTCCACCA+TGG | + | chr2_2:13947675-13947694 | Msa0239490:intron | 40.0% | |
| TGAACAATTAGGGCAGCTAA+AGG | + | chr2_2:13947833-13947852 | Msa0239490:CDS | 40.0% | |
| CTAAAGGTCATAGTTGTGCA+AGG | + | chr2_2:13947849-13947868 | Msa0239490:CDS | 40.0% | |
| TCATAGTTGTGCAAGGGAAA+AGG | + | chr2_2:13947856-13947875 | Msa0239490:CDS | 40.0% | |
| GAGAACAACATAAGGATCAC+TGG | - | chr2_2:13947904-13947923 | None:intergenic | 40.0% | |
| GGACATATTTGGATCAACAG+TGG | + | chr2_2:13947994-13948013 | Msa0239490:intron | 40.0% | |
| ATAGCTGTTTGAATCCGGTT+TGG | + | chr2_2:13948222-13948241 | Msa0239490:CDS | 40.0% | |
| TTCAGCTCTTCATTCCAAAC+CGG | - | chr2_2:13948239-13948258 | None:intergenic | 40.0% | |
| TTTCTCTTTGACAGAACCCT+TGG | + | chr2_2:13948259-13948278 | Msa0239490:CDS | 40.0% | |
| TTCTCTTTGACAGAACCCTT+GGG | + | chr2_2:13948260-13948279 | Msa0239490:CDS | 40.0% | |
| ACCAAATTGAGAACTCCCAA+GGG | - | chr2_2:13948278-13948297 | None:intergenic | 40.0% | |
| !! | GCTTTTGAAAACAGCCTGTA+TGG | + | chr2_2:13948580-13948599 | Msa0239490:intron | 40.0% |
| AATCTAGCTGCAGAGACTAA+TGG | - | chr2_2:13948821-13948840 | None:intergenic | 40.0% | |
| CTTCCTTAATGTTTGCTCAC+CGG | - | chr2_2:13948867-13948886 | None:intergenic | 40.0% | |
| TATCAATTGTGTTAACGGCG+CGG | + | chr2_2:13948928-13948947 | Msa0239490:CDS | 40.0% | |
| GAGTGTCAATTCTATCTCTC+CGG | - | chr2_2:13948993-13949012 | None:intergenic | 40.0% | |
| GTTACTTCAAAATAGTGCGG+AGG | + | chr2_2:13949031-13949050 | Msa0239490:exon | 40.0% | |
| !!! | GTTTTTTCACCTGCAGCTAC+AGG | - | chr2_2:13946900-13946919 | Msa0239480:intron | 45.0% |
| TTGGTGGAACATGAAGAAGC+AGG | - | chr2_2:13946925-13946944 | None:intergenic | 45.0% | |
| AGTTGTGCAAGGGAAAAGGT+TGG | + | chr2_2:13947860-13947879 | Msa0239490:CDS | 45.0% | |
| !! | AAGGGAAAAGGTTGGTGATC+CGG | + | chr2_2:13947868-13947887 | Msa0239490:CDS | 45.0% |
| !! | GATCACTGGTCTTGAAATCC+CGG | - | chr2_2:13947890-13947909 | None:intergenic | 45.0% |
| GTAACAGACTGCAAAGACCA+AGG | + | chr2_2:13948193-13948212 | Msa0239490:intron | 45.0% | |
| ACCCTTGGGAGTTCTCAATT+TGG | + | chr2_2:13948274-13948293 | Msa0239490:CDS | 45.0% | |
| CACCAAATTGAGAACTCCCA+AGG | - | chr2_2:13948279-13948298 | None:intergenic | 45.0% | |
| ! | AAGCTATCACAGAGTGCTTG+TGG | - | chr2_2:13948564-13948583 | None:intergenic | 45.0% |
| CTGCAGAGACTAATGGTTGA+AGG | - | chr2_2:13948814-13948833 | None:intergenic | 45.0% | |
| CTTCCGGTGAGCAAACATTA+AGG | + | chr2_2:13948861-13948880 | Msa0239490:CDS | 45.0% | |
| CGGTGAGCAAACATTAAGGA+AGG | + | chr2_2:13948865-13948884 | Msa0239490:CDS | 45.0% | |
| ! | TTTTCACCTGCAGCTACAGG+TGG | - | chr2_2:13946897-13946916 | Msa0239480:intron | 50.0% |
| !! | AGGGAAAAGGTTGGTGATCC+GGG | + | chr2_2:13947869-13947888 | Msa0239490:CDS | 50.0% |
| AGGCTTCGCGAAGTAGAATC+CGG | + | chr2_2:13948971-13948990 | Msa0239490:CDS | 50.0% | |
| CTGCAGCTACAGGTGGTCAA+AGG | - | chr2_2:13946890-13946909 | Msa0239480:intron | 55.0% | |
| CTTTGACCACCTGTAGCTGC+AGG | + | chr2_2:13946888-13946907 | Msa0239490:five_prime_UTR | 55.0% | |
| GCGCGGTTGTGCAGAATGTT+TGG | + | chr2_2:13948945-13948964 | Msa0239490:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 13946876 | 13949425 | 13946876 | ID=Msa0239490;Name=Msa0239490 |
| chr2_2 | mRNA | 13946876 | 13949425 | 13946876 | ID=Msa0239490-mRNA-1;Parent=Msa0239490;Name=Msa0239490-mRNA-1;_AED=0.14;_eAED=0.14;_QI=147|0.66|0.75|1|0.66|0.5|4|380|184 |
| chr2_2 | exon | 13946876 | 13947014 | 13946876 | ID=Msa0239490-mRNA-1:exon:5771;Parent=Msa0239490-mRNA-1 |
| chr2_2 | exon | 13947820 | 13947938 | 13947820 | ID=Msa0239490-mRNA-1:exon:5772;Parent=Msa0239490-mRNA-1 |
| chr2_2 | exon | 13948200 | 13948349 | 13948200 | ID=Msa0239490-mRNA-1:exon:5773;Parent=Msa0239490-mRNA-1 |
| chr2_2 | exon | 13948752 | 13949425 | 13948752 | ID=Msa0239490-mRNA-1:exon:5774;Parent=Msa0239490-mRNA-1 |
| chr2_2 | five_prime_UTR | 13946876 | 13947014 | 13946876 | ID=Msa0239490-mRNA-1:five_prime_utr;Parent=Msa0239490-mRNA-1 |
| chr2_2 | five_prime_UTR | 13947820 | 13947827 | 13947820 | ID=Msa0239490-mRNA-1:five_prime_utr;Parent=Msa0239490-mRNA-1 |
| chr2_2 | CDS | 13947828 | 13947938 | 13947828 | ID=Msa0239490-mRNA-1:cds;Parent=Msa0239490-mRNA-1 |
| chr2_2 | CDS | 13948200 | 13948349 | 13948200 | ID=Msa0239490-mRNA-1:cds;Parent=Msa0239490-mRNA-1 |
| chr2_2 | CDS | 13948752 | 13949045 | 13948752 | ID=Msa0239490-mRNA-1:cds;Parent=Msa0239490-mRNA-1 |
| chr2_2 | three_prime_UTR | 13949046 | 13949425 | 13949046 | ID=Msa0239490-mRNA-1:three_prime_utr;Parent=Msa0239490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
