Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0757650 | XP_003611962.2 | 96.222 | 450 | 17 | 0 | 1 | 450 | 1 | 450 | 0.0 | 889 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0757650 | sp|Q9SUK9|P2C55_ARATH | 64.189 | 296 | 104 | 2 | 155 | 450 | 171 | 464 | 6.85e-131 | 389 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0757650 | G7KC88 | 96.222 | 450 | 17 | 0 | 1 | 450 | 1 | 450 | 0.0 | 889 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001460 | Msa0757650 | 0.825674 | 4.122233e-54 | -8.615850e-47 |
| Msa0005690 | Msa0757650 | 0.837826 | 4.133946e-57 | -8.615850e-47 |
| Msa0009800 | Msa0757650 | 0.801630 | 8.221937e-49 | -8.615850e-47 |
| Msa0046670 | Msa0757650 | 0.821535 | 3.834671e-53 | -8.615850e-47 |
| Msa0054760 | Msa0757650 | 0.833463 | 5.256149e-56 | -8.615850e-47 |
| Msa0059590 | Msa0757650 | 0.828737 | 7.614407e-55 | -8.615850e-47 |
| Msa0092750 | Msa0757650 | 0.806419 | 8.302274e-50 | -8.615850e-47 |
| Msa0096510 | Msa0757650 | 0.841494 | 4.593426e-58 | -8.615850e-47 |
| Msa0116260 | Msa0757650 | 0.814592 | 1.424200e-51 | -8.615850e-47 |
| Msa0116950 | Msa0757650 | 0.810551 | 1.089543e-50 | -8.615850e-47 |
| Msa0607300 | Msa0757650 | 0.806660 | 7.383209e-50 | -8.615850e-47 |
| Msa0607440 | Msa0757650 | 0.805558 | 1.259791e-49 | -8.615850e-47 |
| Msa0635130 | Msa0757650 | 0.804088 | 2.554853e-49 | -8.615850e-47 |
| Msa0635350 | Msa0757650 | 0.850974 | 1.200195e-60 | -8.615850e-47 |
| Msa0639420 | Msa0757650 | 0.815071 | 1.115326e-51 | -8.615850e-47 |
| Msa0646390 | Msa0757650 | 0.812854 | 3.438875e-51 | -8.615850e-47 |
| Msa0668000 | Msa0757650 | 0.815425 | 9.307071e-52 | -8.615850e-47 |
| Msa0672350 | Msa0757650 | 0.858418 | 8.350378e-63 | -8.615850e-47 |
| Msa0690350 | Msa0757650 | 0.815050 | 1.127445e-51 | -8.615850e-47 |
| Msa0690530 | Msa0757650 | 0.805961 | 1.036858e-49 | -8.615850e-47 |
| Msa0692910 | Msa0757650 | 0.848010 | 8.045930e-60 | -8.615850e-47 |
| Msa0710950 | Msa0757650 | 0.805600 | 1.234239e-49 | -8.615850e-47 |
| Msa0716670 | Msa0757650 | 0.825448 | 4.661784e-54 | -8.615850e-47 |
| Msa0720850 | Msa0757650 | 0.806034 | 1.000845e-49 | -8.615850e-47 |
| Msa0756480 | Msa0757650 | 0.803156 | 3.988061e-49 | -8.615850e-47 |
| Msa0757650 | Msa0760950 | 0.838944 | 2.128021e-57 | -8.615850e-47 |
| Msa0757650 | Msa0761930 | 0.808862 | 2.513678e-50 | -8.615850e-47 |
| Msa0757650 | Msa0772400 | 0.818967 | 1.486741e-52 | -8.615850e-47 |
| Msa0757650 | Msa0773980 | 0.817814 | 2.713453e-52 | -8.615850e-47 |
| Msa0757650 | Msa0790830 | 0.815806 | 7.655814e-52 | -8.615850e-47 |
| Msa0757650 | Msa0800130 | 0.817989 | 2.476167e-52 | -8.615850e-47 |
| Msa0757650 | Msa0808420 | 0.805011 | 1.639663e-49 | -8.615850e-47 |
| Msa0757650 | Msa0814780 | 0.811121 | 8.204402e-51 | -8.615850e-47 |
| Msa0757650 | Msa0835510 | 0.812683 | 3.748252e-51 | -8.615850e-47 |
| Msa0757650 | Msa0837590 | 0.820616 | 6.241683e-53 | -8.615850e-47 |
| Msa0757650 | Msa0840630 | 0.831892 | 1.289703e-55 | -8.615850e-47 |
| Msa0757650 | Msa0875130 | 0.814764 | 1.304632e-51 | -8.615850e-47 |
| Msa0757650 | Msa0899140 | 0.827623 | 1.412583e-54 | -8.615850e-47 |
| Msa0757650 | Msa0900320 | 0.846301 | 2.367157e-59 | -8.615850e-47 |
| Msa0757650 | Msa0901140 | 0.808628 | 2.820863e-50 | -8.615850e-47 |
| Msa0757650 | Msa0910650 | 0.811039 | 8.543875e-51 | -8.615850e-47 |
| Msa0757650 | Msa0950410 | 0.801010 | 1.101501e-48 | -8.615850e-47 |
| Msa0757650 | Msa0964570 | 0.819631 | 1.049365e-52 | -8.615850e-47 |
| Msa0757650 | Msa0965960 | 0.842451 | 2.565774e-58 | -8.615850e-47 |
| Msa0757650 | Msa1000470 | 0.808254 | 3.389950e-50 | -8.615850e-47 |
| Msa0757650 | Msa1016110 | 0.828799 | 7.351965e-55 | -8.615850e-47 |
| Msa0757650 | Msa1045860 | 0.855830 | 4.848036e-62 | -8.615850e-47 |
| Msa0757650 | Msa1045950 | 0.851438 | 8.873504e-61 | -8.615850e-47 |
| Msa0757650 | Msa1046890 | 0.840380 | 9.003236e-58 | -8.615850e-47 |
| Msa0757650 | Msa1069450 | 0.831063 | 2.064319e-55 | -8.615850e-47 |
| Msa0757650 | Msa1072640 | 0.812507 | 4.093944e-51 | -8.615850e-47 |
| Msa0757650 | Msa1081850 | 0.818968 | 1.486050e-52 | -8.615850e-47 |
| Msa0757650 | Msa1087410 | 0.855890 | 4.654740e-62 | -8.615850e-47 |
| Msa0757650 | Msa1090230 | 0.809701 | 1.661500e-50 | -8.615850e-47 |
| Msa0757650 | Msa1111670 | 0.805739 | 1.154211e-49 | -8.615850e-47 |
| Msa0757650 | Msa1130660 | 0.812205 | 4.766637e-51 | -8.615850e-47 |
| Msa0757650 | Msa1130730 | 0.819959 | 8.828991e-53 | -8.615850e-47 |
| Msa0757650 | Msa1154130 | 0.812265 | 4.625554e-51 | -8.615850e-47 |
| Msa0757650 | Msa1156270 | 0.803623 | 3.191429e-49 | -8.615850e-47 |
| Msa0757650 | Msa1166020 | 0.818367 | 2.033657e-52 | -8.615850e-47 |
| Msa0757650 | Msa1183730 | 0.822725 | 2.031243e-53 | -8.615850e-47 |
| Msa0757650 | Msa1199690 | 0.807122 | 5.898169e-50 | -8.615850e-47 |
| Msa0757650 | Msa1214900 | 0.816700 | 4.831229e-52 | -8.615850e-47 |
| Msa0757650 | Msa1222390 | 0.800123 | 1.670528e-48 | -8.615850e-47 |
| Msa0757650 | Msa1223600 | 0.801319 | 9.523552e-49 | -8.615850e-47 |
| Msa0757650 | Msa1226600 | 0.814883 | 1.227886e-51 | -8.615850e-47 |
| Msa0757650 | Msa1238480 | 0.819455 | 1.150936e-52 | -8.615850e-47 |
| Msa0757650 | Msa1258100 | 0.805118 | 1.557697e-49 | -8.615850e-47 |
| Msa0757650 | Msa1258770 | 0.805838 | 1.100031e-49 | -8.615850e-47 |
| Msa0757650 | Msa1268370 | 0.814722 | 1.333077e-51 | -8.615850e-47 |
| Msa0757650 | Msa1279340 | 0.826250 | 3.006763e-54 | -8.615850e-47 |
| Msa0757650 | Msa1286910 | 0.826454 | 2.688758e-54 | -8.615850e-47 |
| Msa0757650 | Msa1298740 | 0.805874 | 1.081305e-49 | -8.615850e-47 |
| Msa0757650 | Msa1300880 | 0.808657 | 2.780419e-50 | -8.615850e-47 |
| Msa0757650 | Msa1309910 | 0.807593 | 4.687012e-50 | -8.615850e-47 |
| Msa0757650 | Msa1319440 | 0.805298 | 1.428153e-49 | -8.615850e-47 |
| Msa0757650 | Msa1330280 | 0.803545 | 3.312117e-49 | -8.615850e-47 |
| Msa0757650 | Msa1345120 | 0.812900 | 3.359745e-51 | -8.615850e-47 |
| Msa0757650 | Msa1349360 | 0.804782 | 1.831045e-49 | -8.615850e-47 |
| Msa0757650 | Msa1364650 | 0.800169 | 1.634985e-48 | -8.615850e-47 |
| Msa0757650 | Msa1366700 | 0.825233 | 5.240237e-54 | -8.615850e-47 |
| Msa0757650 | Msa1367600 | 0.804911 | 1.720602e-49 | -8.615850e-47 |
| Msa0757650 | Msa1368730 | 0.809525 | 1.812622e-50 | -8.615850e-47 |
| Msa0757650 | Msa1374810 | 0.807758 | 4.323445e-50 | -8.615850e-47 |
| Msa0757650 | Msa1384980 | 0.826629 | 2.442105e-54 | -8.615850e-47 |
| Msa0757650 | Msa1396310 | 0.817862 | 2.645425e-52 | -8.615850e-47 |
| Msa0757650 | Msa1403900 | 0.802977 | 4.342765e-49 | -8.615850e-47 |
| Msa0757650 | Msa1422490 | 0.815796 | 7.692623e-52 | -8.615850e-47 |
| Msa0757650 | Msa1422500 | 0.825516 | 4.491414e-54 | -8.615850e-47 |
| Msa0757650 | Msa1423190 | 0.821197 | 4.589575e-53 | -8.615850e-47 |
| Msa0757650 | Msa1431240 | 0.839685 | 1.367033e-57 | -8.615850e-47 |
| Msa0757650 | Msa1435910 | 0.834053 | 3.744036e-56 | -8.615850e-47 |
| Msa0757650 | Msa1449510 | 0.803483 | 3.412275e-49 | -8.615850e-47 |
| Msa0757650 | Msa1451840 | 0.803707 | 3.066293e-49 | -8.615850e-47 |
| Msa0757650 | Msa1455000 | 0.806854 | 6.720618e-50 | -8.615850e-47 |
| Msa0131390 | Msa0757650 | 0.818198 | 2.221104e-52 | -8.615850e-47 |
| Msa0139920 | Msa0757650 | 0.884978 | 1.208175e-71 | -8.615850e-47 |
| Msa0155030 | Msa0757650 | 0.802469 | 5.527648e-49 | -8.615850e-47 |
| Msa0162030 | Msa0757650 | 0.822501 | 2.290681e-53 | -8.615850e-47 |
| Msa0162070 | Msa0757650 | 0.803319 | 3.688871e-49 | -8.615850e-47 |
| Msa0177490 | Msa0757650 | 0.815639 | 8.339230e-52 | -8.615850e-47 |
| Msa0181010 | Msa0757650 | 0.808674 | 2.758228e-50 | -8.615850e-47 |
| Msa0181020 | Msa0757650 | 0.835297 | 1.821233e-56 | -8.615850e-47 |
| Msa0186750 | Msa0757650 | 0.800987 | 1.113605e-48 | -8.615850e-47 |
| Msa0193000 | Msa0757650 | 0.813574 | 2.389340e-51 | -8.615850e-47 |
| Msa0195670 | Msa0757650 | 0.803565 | 3.281450e-49 | -8.615850e-47 |
| Msa0203330 | Msa0757650 | 0.804361 | 2.241930e-49 | -8.615850e-47 |
| Msa0213020 | Msa0757650 | 0.837773 | 4.264454e-57 | -8.615850e-47 |
| Msa0226800 | Msa0757650 | 0.823097 | 1.664141e-53 | -8.615850e-47 |
| Msa0237440 | Msa0757650 | 0.801057 | 1.077630e-48 | -8.615850e-47 |
| Msa0370180 | Msa0757650 | 0.808116 | 3.626534e-50 | -8.615850e-47 |
| Msa0372250 | Msa0757650 | 0.829425 | 5.185877e-55 | -8.615850e-47 |
| Msa0375430 | Msa0757650 | 0.805941 | 1.046833e-49 | -8.615850e-47 |
| Msa0376900 | Msa0757650 | 0.804958 | 1.682438e-49 | -8.615850e-47 |
| Msa0378000 | Msa0757650 | 0.801733 | 7.835097e-49 | -8.615850e-47 |
| Msa0380430 | Msa0757650 | 0.801415 | 9.103954e-49 | -8.615850e-47 |
| Msa0387790 | Msa0757650 | 0.809744 | 1.626409e-50 | -8.615850e-47 |
| Msa0393140 | Msa0757650 | 0.822701 | 2.058139e-53 | -8.615850e-47 |
| Msa0396970 | Msa0757650 | 0.811939 | 5.446965e-51 | -8.615850e-47 |
| Msa0397000 | Msa0757650 | 0.811517 | 6.730147e-51 | -8.615850e-47 |
| Msa0432390 | Msa0757650 | 0.806457 | 8.151348e-50 | -8.615850e-47 |
| Msa0446480 | Msa0757650 | 0.818112 | 2.322811e-52 | -8.615850e-47 |
| Msa0463580 | Msa0757650 | 0.830403 | 2.995519e-55 | -8.615850e-47 |
| Msa0469270 | Msa0757650 | 0.805755 | 1.145187e-49 | -8.615850e-47 |
| Msa0476820 | Msa0757650 | 0.802790 | 4.745399e-49 | -8.615850e-47 |
| Msa0242290 | Msa0757650 | 0.813278 | 2.775250e-51 | -8.615850e-47 |
| Msa0263620 | Msa0757650 | 0.801468 | 8.879439e-49 | -8.615850e-47 |
| Msa0264020 | Msa0757650 | 0.805702 | 1.175173e-49 | -8.615850e-47 |
| Msa0301460 | Msa0757650 | 0.806007 | 1.013928e-49 | -8.615850e-47 |
| Msa0304870 | Msa0757650 | 0.817859 | 2.650627e-52 | -8.615850e-47 |
| Msa0315010 | Msa0757650 | 0.815107 | 1.095210e-51 | -8.615850e-47 |
| Msa0321230 | Msa0757650 | 0.861111 | 1.290807e-63 | -8.615850e-47 |
| Msa0322970 | Msa0757650 | 0.816281 | 5.995738e-52 | -8.615850e-47 |
| Msa0327900 | Msa0757650 | 0.847719 | 9.680971e-60 | -8.615850e-47 |
| Msa0341260 | Msa0757650 | 0.815711 | 8.036149e-52 | -8.615850e-47 |
| Msa0348410 | Msa0757650 | 0.832436 | 9.466119e-56 | -8.615850e-47 |
| Msa0358720 | Msa0757650 | 0.806278 | 8.890096e-50 | -8.615850e-47 |
| Msa0484890 | Msa0757650 | 0.800957 | 1.129397e-48 | -8.615850e-47 |
| Msa0489620 | Msa0757650 | 0.801325 | 9.497594e-49 | -8.615850e-47 |
| Msa0492000 | Msa0757650 | 0.809856 | 1.538992e-50 | -8.615850e-47 |
| Msa0495510 | Msa0757650 | 0.800715 | 1.265553e-48 | -8.615850e-47 |
| Msa0500510 | Msa0757650 | 0.801903 | 7.226972e-49 | -8.615850e-47 |
| Msa0512310 | Msa0757650 | 0.824937 | 6.155523e-54 | -8.615850e-47 |
| Msa0518160 | Msa0757650 | 0.801402 | 9.160208e-49 | -8.615850e-47 |
| Msa0524510 | Msa0757650 | 0.800565 | 1.357835e-48 | -8.615850e-47 |
| Msa0542040 | Msa0757650 | 0.803767 | 2.979721e-49 | -8.615850e-47 |
| Msa0549740 | Msa0757650 | 0.809414 | 1.914800e-50 | -8.615850e-47 |
| Msa0553350 | Msa0757650 | 0.811237 | 7.741233e-51 | -8.615850e-47 |
| Msa0553520 | Msa0757650 | 0.810276 | 1.249190e-50 | -8.615850e-47 |
| Msa0555980 | Msa0757650 | 0.848924 | 4.495305e-60 | -8.615850e-47 |
| Msa0568810 | Msa0757650 | 0.823838 | 1.116217e-53 | -8.615850e-47 |
| Msa0572820 | Msa0757650 | 0.820377 | 7.083828e-53 | -8.615850e-47 |
| Msa0581190 | Msa0757650 | 0.821464 | 3.981229e-53 | -8.615850e-47 |
| Msa0595780 | Msa0757650 | 0.809864 | 1.532622e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0757650 | MtrunA17_Chr5g0403781 | 96.222 | 450 | 17 | 0 | 1 | 450 | 1 | 450 | 0.0 | 889 |
| Msa0757650 | MtrunA17_Chr1g0154711 | 64.630 | 311 | 99 | 4 | 139 | 447 | 204 | 505 | 8.14e-134 | 395 |
| Msa0757650 | MtrunA17_Chr3g0106291 | 38.672 | 256 | 135 | 7 | 206 | 447 | 62 | 309 | 9.81e-41 | 147 |
| Msa0757650 | MtrunA17_Chr2g0278991 | 35.433 | 254 | 158 | 4 | 196 | 447 | 1041 | 1290 | 5.55e-40 | 153 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0757650 | AT4G16580.1 | 64.189 | 296 | 104 | 2 | 155 | 450 | 171 | 464 | 6.97e-132 | 389 |
| Msa0757650 | AT5G66720.1 | 52.300 | 413 | 162 | 8 | 47 | 447 | 25 | 414 | 5.17e-131 | 385 |
| Msa0757650 | AT5G66720.2 | 52.206 | 408 | 167 | 7 | 47 | 447 | 25 | 411 | 1.11e-129 | 381 |
| Msa0757650 | AT4G33500.1 | 41.036 | 251 | 141 | 4 | 196 | 444 | 474 | 719 | 2.59e-50 | 182 |
| Msa0757650 | AT2G30170.1 | 35.849 | 265 | 147 | 8 | 198 | 447 | 42 | 298 | 1.56e-44 | 157 |
| Msa0757650 | AT2G30170.6 | 38.974 | 195 | 111 | 6 | 198 | 388 | 7 | 197 | 4.33e-37 | 135 |
| Msa0757650 | AT2G30170.3 | 34.934 | 229 | 127 | 7 | 233 | 447 | 1 | 221 | 7.94e-37 | 135 |
| Msa0757650 | AT2G30170.5 | 38.974 | 195 | 111 | 6 | 198 | 388 | 42 | 232 | 1.25e-36 | 135 |
| Msa0757650 | AT2G30170.7 | 38.365 | 159 | 91 | 5 | 233 | 388 | 1 | 155 | 2.41e-29 | 114 |
| Msa0757650 | AT2G30170.4 | 38.255 | 149 | 87 | 4 | 198 | 343 | 42 | 188 | 7.82e-27 | 108 |
| Msa0757650 | AT2G30170.2 | 34.641 | 153 | 82 | 4 | 307 | 447 | 12 | 158 | 4.67e-21 | 90.1 |
Find 130 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCACTAAATGCTATTAATT+TGG | 0.082909 | 5_2:-12599946 | Msa0757650:CDS |
| TTCACCTTCCAATGCTATTC+TGG | 0.118484 | 5_2:-12602084 | Msa0757650:CDS |
| TTGCAGATGGTGTTGGTGGC+TGG | 0.202067 | 5_2:-12600646 | Msa0757650:CDS |
| TGTATGGTCCTTTGAATTTC+GGG | 0.205284 | 5_2:-12601920 | Msa0757650:CDS |
| TTGTATGGTCCTTTGAATTT+CGG | 0.224793 | 5_2:-12601921 | Msa0757650:CDS |
| ACCTAATTCGGTTTGGATTA+GGG | 0.230336 | 5_2:+12602687 | None:intergenic |
| AACCTAATTCGGTTTGGATT+AGG | 0.238533 | 5_2:+12602686 | None:intergenic |
| TCCCTAATCCAAACCGAATT+AGG | 0.243177 | 5_2:-12602688 | Msa0757650:five_prime_UTR |
| CCGCTCCTCGCCAATTGATA+TGG | 0.249497 | 5_2:+12599846 | None:intergenic |
| TGAATAGCAATTACTTGAAT+TGG | 0.256640 | 5_2:+12602142 | None:intergenic |
| TCAGCTGCTGCTCTTGAGTA+TGG | 0.270822 | 5_2:-12599500 | Msa0757650:CDS |
| CAGAATTCGGGTTTGCTTCA+TGG | 0.278734 | 5_2:-12601867 | Msa0757650:CDS |
| CTTAATATACACAATGAAAT+TGG | 0.289652 | 5_2:+12599393 | None:intergenic |
| GCCTTCTCTAACACCCTTAC+TGG | 0.296839 | 5_2:+12600530 | None:intergenic |
| AGCAGGTGGTGGTGTGAAAA+AGG | 0.297881 | 5_2:-12602393 | Msa0757650:five_prime_UTR |
| AGCATTCAGCTTTGAAAGAT+TGG | 0.300516 | 5_2:+12602283 | None:intergenic |
| TGAAGACGAGGAATCGATTA+AGG | 0.307387 | 5_2:+12602617 | None:intergenic |
| TCGAATTGCTCTTGCGGAAT+TGG | 0.307860 | 5_2:+12600577 | None:intergenic |
| TATTCTGCTTGCTGCTTGGC+TGG | 0.313286 | 5_2:-12601816 | Msa0757650:CDS |
| TACTGGATTAAAAGAACCTT+TGG | 0.317637 | 5_2:+12600547 | None:intergenic |
| CGGAATTGGCTACAAGTTCC+TGG | 0.321023 | 5_2:+12600591 | None:intergenic |
| GCACTAAATGCTATTAATTT+GGG | 0.330419 | 5_2:-12599945 | Msa0757650:CDS |
| TCAAGAGCAGCAGCTGAAAA+TGG | 0.337984 | 5_2:+12599506 | None:intergenic |
| TTGAACCCGCGTTGTTGAAC+AGG | 0.339753 | 5_2:+12599873 | None:intergenic |
| GGAGTATTAAACCTTGTTAC+TGG | 0.342802 | 5_2:+12602206 | None:intergenic |
| TAGTTGGAGGATTCAGAATT+CGG | 0.347094 | 5_2:-12601880 | Msa0757650:CDS |
| GGATTCATTGTGATAAGAAA+TGG | 0.353829 | 5_2:-12599915 | Msa0757650:CDS |
| GCTATTAATTTGGGTGATAG+TGG | 0.356777 | 5_2:-12599936 | Msa0757650:CDS |
| GTTGTATAATAATGCAAATA+AGG | 0.380102 | 5_2:+12599224 | None:intergenic |
| TCACCTTCCAATGCTATTCT+GGG | 0.384802 | 5_2:-12602083 | Msa0757650:CDS |
| ATCTTATTCTGCTTGCTGCT+TGG | 0.390535 | 5_2:-12601820 | Msa0757650:CDS |
| CCAGGAGATATCATTGTTGC+TGG | 0.394796 | 5_2:-12599677 | Msa0757650:CDS |
| AAGCCCTTGAAGATGTTATC+AGG | 0.397966 | 5_2:-12600755 | Msa0757650:CDS |
| GAGTTTGAGAAGACCGCAAC+AGG | 0.399205 | 5_2:-12601946 | Msa0757650:CDS |
| TGCAGATGGTGTTGGTGGCT+GGG | 0.399726 | 5_2:-12600645 | Msa0757650:CDS |
| CGCTCCTCGCCAATTGATAT+GGG | 0.403739 | 5_2:+12599847 | None:intergenic |
| TTCAAGGGAAGAACTCATAA+AGG | 0.409592 | 5_2:-12601987 | Msa0757650:CDS |
| GTTCAATTTCCCATATCAAT+TGG | 0.409645 | 5_2:-12599856 | Msa0757650:CDS |
| TCAAGGGAAGAACTCATAAA+GGG | 0.414978 | 5_2:-12601986 | Msa0757650:CDS |
| AAGGAAGAAAGAGACGAAAC+AGG | 0.416526 | 5_2:+12602185 | None:intergenic |
| GAGTATGGATACCGATTTGA+TGG | 0.417998 | 5_2:-12599485 | Msa0757650:CDS |
| ATGATATCTCCTGGAGCAAC+AGG | 0.431491 | 5_2:+12599686 | None:intergenic |
| GATATTGTTGGAGTGGTTGT+AGG | 0.433182 | 5_2:-12599620 | Msa0757650:CDS |
| CAGCCCTCCTGATGAACAAC+TGG | 0.434352 | 5_2:-12601766 | Msa0757650:CDS |
| GTTGGTGGCTGGGCAGATGT+TGG | 0.436846 | 5_2:-12600635 | Msa0757650:CDS |
| AGTTGGAGGATTCAGAATTC+GGG | 0.439453 | 5_2:-12601879 | Msa0757650:CDS |
| GCATGCTGGTGTGTACTTCA+AGG | 0.449823 | 5_2:-12602003 | Msa0757650:CDS |
| GTTTAAATTTCACGTTACTT+AGG | 0.454614 | 5_2:-12602350 | Msa0757650:five_prime_UTR |
| GTAACGTGAAATTTAAACCT+TGG | 0.459744 | 5_2:+12602355 | None:intergenic |
| AGCGAGCTCTTGACACGAAA+AGG | 0.460925 | 5_2:-12599535 | Msa0757650:CDS |
| TGATCCTGATAACATCTTCA+AGG | 0.461298 | 5_2:+12600751 | None:intergenic |
| CAGTTGTTCATCAGGAGGGC+TGG | 0.467010 | 5_2:+12601767 | None:intergenic |
| ACTGGATTAAAAGAACCTTT+GGG | 0.468734 | 5_2:+12600548 | None:intergenic |
| TGTAAGACACGACAACTGTT+AGG | 0.469269 | 5_2:+12599447 | None:intergenic |
| CGATTCCTCGTCTTCACAAT+CGG | 0.471084 | 5_2:-12602610 | Msa0757650:intron |
| ATCATTGTTGCTGGAACAGA+TGG | 0.479550 | 5_2:-12599668 | Msa0757650:CDS |
| ATATCACTCATTGACTGAGC+TGG | 0.489631 | 5_2:+12599421 | None:intergenic |
| TTTACAGTACCTGTTGCTCC+AGG | 0.495219 | 5_2:-12599695 | Msa0757650:CDS |
| ATGTACAACAATGATATTGT+TGG | 0.496451 | 5_2:-12599632 | Msa0757650:CDS |
| TGCTCAGAAGATAGCAGCAT+TGG | 0.497423 | 5_2:-12599564 | Msa0757650:CDS |
| AACATCTCCCAGAATAGCAT+TGG | 0.499454 | 5_2:+12602076 | None:intergenic |
| AATGTTTCAGAATCTGGGTA+TGG | 0.500354 | 5_2:-12602430 | Msa0757650:intron |
| CACGTACATGTTAGCCAAAG+TGG | 0.502945 | 5_2:+12601734 | None:intergenic |
| CCAGCAACAATGATATCTCC+TGG | 0.503201 | 5_2:+12599677 | None:intergenic |
| CAAGTTTGCCTCCATCAAAT+CGG | 0.504453 | 5_2:+12599474 | None:intergenic |
| TGTGAAGATGAACAAGCAAT+TGG | 0.507426 | 5_2:-12600671 | Msa0757650:CDS |
| CGTTGGTGCAAGAAAATCAA+TGG | 0.508086 | 5_2:-12602111 | Msa0757650:CDS |
| GATTCATTGTGATAAGAAAT+GGG | 0.509981 | 5_2:-12599914 | Msa0757650:CDS |
| CCTCCAACTAGCATCAAAAG+TGG | 0.518120 | 5_2:+12601893 | None:intergenic |
| ATCCAGATAAGGTGGCGACT+GGG | 0.519570 | 5_2:-12600715 | Msa0757650:CDS |
| CATCCAGATAAGGTGGCGAC+TGG | 0.520452 | 5_2:-12600716 | Msa0757650:CDS |
| ATCTTCTGAGCAGTTGCTTG+TGG | 0.525652 | 5_2:+12599575 | None:intergenic |
| CCAAATAAAACTAAAACGCT+AGG | 0.526896 | 5_2:-12602741 | Msa0757650:five_prime_UTR |
| TGGTTCAATTCTGTTAAAGC+AGG | 0.531737 | 5_2:-12602410 | Msa0757650:five_prime_UTR |
| ACTGGAAAACTCCTCCACTT+TGG | 0.533832 | 5_2:-12601748 | Msa0757650:CDS |
| TATCATTGCTCTTATCAATG+AGG | 0.538722 | 5_2:-12600468 | Msa0757650:intron |
| CAAGATTTCACAAAGCATGC+TGG | 0.538735 | 5_2:-12602017 | Msa0757650:CDS |
| GGTGCAACTAGAGCTAGATT+AGG | 0.539864 | 5_2:-12599599 | Msa0757650:CDS |
| AGAGCTAGGTAGATCACCTT+CGG | 0.542202 | 5_2:+12599821 | None:intergenic |
| ATTGGTGTTGCAGATGGTGT+TGG | 0.543019 | 5_2:-12600653 | Msa0757650:CDS |
| TTTCCAGTTGTTCATCAGGA+GGG | 0.543076 | 5_2:+12601763 | None:intergenic |
| GAAGGTGATCTACCTAGCTC+TGG | 0.545796 | 5_2:-12599819 | Msa0757650:CDS |
| TTCCTCTCGAATTGCTCTTG+CGG | 0.547274 | 5_2:+12600571 | None:intergenic |
| GGTGTTGCAGATGGTGTTGG+TGG | 0.549063 | 5_2:-12600650 | Msa0757650:CDS |
| GTCGAGAAATTCTTTGTCCA+CGG | 0.551550 | 5_2:+12601843 | None:intergenic |
| TCCAGATAAGGTGGCGACTG+GGG | 0.551906 | 5_2:-12600714 | Msa0757650:CDS |
| AACTTTACCTCGCCAGAGCT+AGG | 0.556889 | 5_2:+12599807 | None:intergenic |
| CATGCTGGTGTGTACTTCAA+GGG | 0.557081 | 5_2:-12602002 | Msa0757650:CDS |
| GTCGCCACCTTATCTGGATG+TGG | 0.559731 | 5_2:+12600719 | None:intergenic |
| GGAATTGGCTACAAGTTCCT+GGG | 0.570141 | 5_2:+12600592 | None:intergenic |
| GTGGAACGCCCGAAATTCAA+AGG | 0.571207 | 5_2:+12601912 | None:intergenic |
| CGGGTTTGCTTCATGGACCG+TGG | 0.571395 | 5_2:-12601860 | Msa0757650:CDS |
| TTCAATTCTGTTAAAGCAGG+TGG | 0.571993 | 5_2:-12602407 | Msa0757650:five_prime_UTR |
| AATTCTGTTAAAGCAGGTGG+TGG | 0.574430 | 5_2:-12602404 | Msa0757650:five_prime_UTR |
| TGAACCCGCGTTGTTGAACA+GGG | 0.574747 | 5_2:+12599874 | None:intergenic |
| TTACCTACCACATCCAGATA+AGG | 0.576882 | 5_2:-12600726 | Msa0757650:CDS |
| TATGCGGCTAAGCCTCTCCT+TGG | 0.581587 | 5_2:-12599366 | Msa0757650:three_prime_UTR |
| TCCAGTAAGGGTGTTAGAGA+AGG | 0.582497 | 5_2:-12600531 | Msa0757650:CDS |
| TTAGCTGCCATGCTACACTT+AGG | 0.586952 | 5_2:-12599279 | Msa0757650:three_prime_UTR |
| GGCAGATGTTGGTGTTAATG+CGG | 0.593105 | 5_2:-12600624 | Msa0757650:CDS |
| AACATAGTGTGCCAGTAACA+AGG | 0.595078 | 5_2:-12602217 | Msa0757650:CDS |
| CCATATCAATTGGCGAGGAG+CGG | 0.596295 | 5_2:-12599846 | Msa0757650:CDS |
| TGCTATTCAAGCAATAACGT+TGG | 0.597168 | 5_2:-12602128 | Msa0757650:CDS |
| TTAAGGTTGAAAAGTTTGAG+AGG | 0.598886 | 5_2:+12602634 | None:intergenic |
| CCAGATAAGGTGGCGACTGG+GGG | 0.601048 | 5_2:-12600713 | Msa0757650:CDS |
| GCAGATGTTGGTGTTAATGC+GGG | 0.602920 | 5_2:-12600623 | Msa0757650:CDS |
| GATCCTGATAACATCTTCAA+GGG | 0.603871 | 5_2:+12600752 | None:intergenic |
| CAAGCAATTGGTGTTGCAGA+TGG | 0.607010 | 5_2:-12600659 | Msa0757650:CDS |
| CCACCTTATCTGGATGTGGT+AGG | 0.607414 | 5_2:+12600723 | None:intergenic |
| CAACAATGATATTGTTGGAG+TGG | 0.615629 | 5_2:-12599627 | Msa0757650:CDS |
| TTGGCGAGGAGCGGTACCGA+AGG | 0.618376 | 5_2:-12599837 | Msa0757650:CDS |
| AGTCCCCTGTTCAACAACGC+GGG | 0.619635 | 5_2:-12599878 | Msa0757650:CDS |
| GGACCATACAAAACCTGTTG+CGG | 0.623270 | 5_2:+12601933 | None:intergenic |
| AGCAATGATACAAACAGTTG+AGG | 0.624236 | 5_2:+12600481 | None:intergenic |
| TAATGCGGGACTGTATGCCC+AGG | 0.631859 | 5_2:-12600609 | Msa0757650:CDS |
| AAGTATTCCTAAGTGTAGCA+TGG | 0.632793 | 5_2:+12599272 | None:intergenic |
| ATTTCCCATATCAATTGGCG+AGG | 0.641059 | 5_2:-12599851 | Msa0757650:CDS |
| TCTCCCAGAATAGCATTGGA+AGG | 0.642675 | 5_2:+12602080 | None:intergenic |
| CCTACCACATCCAGATAAGG+TGG | 0.648319 | 5_2:-12600723 | Msa0757650:CDS |
| TGATCTACCTAGCTCTGGCG+AGG | 0.657103 | 5_2:-12599814 | Msa0757650:intron |
| TATGGATACCGATTTGATGG+AGG | 0.658318 | 5_2:-12599482 | Msa0757650:CDS |
| ACTCATAAAGGGTTTGTGCG+AGG | 0.664894 | 5_2:-12601975 | Msa0757650:CDS |
| TTCGCGAAACAATAGTAACA+AGG | 0.665340 | 5_2:-12602244 | Msa0757650:CDS |
| TCATACCGATTGTGAAGACG+AGG | 0.668471 | 5_2:+12602605 | None:intergenic |
| TTCCGCAAGAGCAATTCGAG+AGG | 0.688045 | 5_2:-12600573 | Msa0757650:CDS |
| GCAATTCGAGAGGAACCCAA+AGG | 0.688593 | 5_2:-12600563 | Msa0757650:CDS |
| GTGTATATTAAGATGCTATG+CGG | 0.703785 | 5_2:-12599382 | Msa0757650:three_prime_UTR |
| AAGTCCCCTGTTCAACAACG+CGG | 0.711155 | 5_2:-12599879 | Msa0757650:CDS |
| GTACATGTTAGCCAAAGTGG+AGG | 0.719821 | 5_2:+12601737 | None:intergenic |
| GAACCCGCGTTGTTGAACAG+GGG | 0.730041 | 5_2:+12599875 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAATATTACAGAAATTTT+AGG | - | chr5_2:12600443-12600462 | Msa0757650:intron | 10.0% |
| !!! | TAAATCATGGTTTTAAATTA+TGG | + | chr5_2:12600568-12600587 | None:intergenic | 15.0% |
| !! | TTATTTAATTAATTCATGAC+AGG | + | chr5_2:12600634-12600653 | None:intergenic | 15.0% |
| !! | GAATTAATTAAATAACAACT+TGG | - | chr5_2:12600639-12600658 | Msa0757650:CDS | 15.0% |
| !! | AAAATATAAAAAAAATGCCA+AGG | + | chr5_2:12602597-12602616 | None:intergenic | 15.0% |
| !!! | AAATATCTATTTTCTTTCTT+TGG | + | chr5_2:12602751-12602770 | None:intergenic | 15.0% |
| !! | CACTAATTAACAATAATAGA+AGG | + | chr5_2:12599410-12599429 | None:intergenic | 20.0% |
| !!! | AATTTTAATGTTTCAGAATC+TGG | - | chr5_2:12599507-12599526 | Msa0757650:CDS | 20.0% |
| !!! | ATTTTAATGTTTCAGAATCT+GGG | - | chr5_2:12599508-12599527 | Msa0757650:CDS | 20.0% |
| !! | CTATTTCAAACAACATAAAT+AGG | + | chr5_2:12600315-12600334 | None:intergenic | 20.0% |
| !!! | ATTTATGTTGTTTGAAATAG+AGG | - | chr5_2:12600315-12600334 | Msa0757650:intron | 20.0% |
| !! | AAAGAATGAAAATTAATCAG+TGG | + | chr5_2:12601957-12601976 | None:intergenic | 20.0% |
| !!! | TGATTAATTTTCATTCTTTG+TGG | - | chr5_2:12601958-12601977 | Msa0757650:CDS | 20.0% |
| !! | CTTAATATACACAATGAAAT+TGG | + | chr5_2:12602553-12602572 | None:intergenic | 20.0% |
| !!! | TGTATTTTTTTCTCTAGAAA+TGG | - | chr5_2:12602693-12602712 | Msa0757650:five_prime_UTR | 20.0% |
| !! | GTTGTATAATAATGCAAATA+AGG | + | chr5_2:12602722-12602741 | None:intergenic | 20.0% |
| ! | GTTTAAATTTCACGTTACTT+AGG | - | chr5_2:12599593-12599612 | Msa0757650:CDS | 25.0% |
| ! | TGAATAGCAATTACTTGAAT+TGG | + | chr5_2:12599804-12599823 | None:intergenic | 25.0% |
| ! | TCAAACAACATAAATAGGAT+AGG | + | chr5_2:12600310-12600329 | None:intergenic | 25.0% |
| !! | CATCAGTAATATAAAGGTTT+TGG | + | chr5_2:12600535-12600554 | None:intergenic | 25.0% |
| ! | AAACCTTTATATTACTGATG+CGG | - | chr5_2:12600535-12600554 | Msa0757650:CDS | 25.0% |
| ! | TATTAGAGAAACCATTAGAA+AGG | - | chr5_2:12600980-12600999 | Msa0757650:intron | 25.0% |
| ! | GTTCTATCATAAACCATATT+TGG | + | chr5_2:12601029-12601048 | None:intergenic | 25.0% |
| !! | TTGTTTTCTTTTCATCAACA+TGG | - | chr5_2:12601611-12601630 | Msa0757650:intron | 25.0% |
| !! | AATTTTGTACAATTCATGTC+TGG | - | chr5_2:12601635-12601654 | Msa0757650:intron | 25.0% |
| ! | TATTTAATTGATTGAGTGAC+AGG | + | chr5_2:12601788-12601807 | None:intergenic | 25.0% |
| ! | GTACTTAAAAACTTAAGACT+CGG | + | chr5_2:12601845-12601864 | None:intergenic | 25.0% |
| ! | GCACTAAATGCTATTAATTT+GGG | - | chr5_2:12601998-12602017 | Msa0757650:CDS | 25.0% |
| ! | GATTCATTGTGATAAGAAAT+GGG | - | chr5_2:12602029-12602048 | Msa0757650:CDS | 25.0% |
| ! | AAGTTTATCAATTTATGTGC+AGG | - | chr5_2:12602223-12602242 | Msa0757650:CDS | 25.0% |
| ! | ATGTACAACAATGATATTGT+TGG | - | chr5_2:12602311-12602330 | Msa0757650:exon | 25.0% |
| !! | ATCTATTTTCTTTCTTTGGA+GGG | + | chr5_2:12602747-12602766 | None:intergenic | 25.0% |
| !! | TATCTATTTTCTTTCTTTGG+AGG | + | chr5_2:12602748-12602767 | None:intergenic | 25.0% |
| !!! | CCTAGCGTTTTAGTTTTATT+TGG | + | chr5_2:12599205-12599224 | None:intergenic | 30.0% |
| CCAAATAAAACTAAAACGCT+AGG | - | chr5_2:12599202-12599221 | Msa0757650:three_prime_UTR | 30.0% | |
| TTAAGGTTGAAAAGTTTGAG+AGG | + | chr5_2:12599312-12599331 | None:intergenic | 30.0% | |
| GTAACGTGAAATTTAAACCT+TGG | + | chr5_2:12599591-12599610 | None:intergenic | 30.0% | |
| ! | TTAGGACTATTTTGCATACA+AGG | - | chr5_2:12599611-12599630 | Msa0757650:CDS | 30.0% |
| TAAAAAAGAACTCGAACACA+AGG | + | chr5_2:12599780-12599799 | None:intergenic | 30.0% | |
| TTGTATGGTCCTTTGAATTT+CGG | - | chr5_2:12600022-12600041 | Msa0757650:intron | 30.0% | |
| CATAAATAGGATAGGCTTAT+TGG | + | chr5_2:12600302-12600321 | None:intergenic | 30.0% | |
| ! | AAGTTTTCAATTGCACTATG+CGG | - | chr5_2:12600476-12600495 | Msa0757650:CDS | 30.0% |
| AACCTTTATATTACTGATGC+GGG | - | chr5_2:12600536-12600555 | Msa0757650:CDS | 30.0% | |
| TTAATTCATGACAGGAAACT+TGG | + | chr5_2:12600626-12600645 | None:intergenic | 30.0% | |
| ATTAAATAACAACTTGGCAG+CGG | - | chr5_2:12600645-12600664 | Msa0757650:CDS | 30.0% | |
| TTATACTACTACGTGTTGTA+TGG | - | chr5_2:12600690-12600709 | Msa0757650:CDS | 30.0% | |
| !! | TAGAGAAGTTGGTAGAAAAT+AGG | - | chr5_2:12600847-12600866 | Msa0757650:intron | 30.0% |
| ! | GAAAATAGGCTTAGATGTTT+TGG | - | chr5_2:12600861-12600880 | Msa0757650:intron | 30.0% |
| TTGATCTACTCTTCTTACAA+CGG | + | chr5_2:12600913-12600932 | None:intergenic | 30.0% | |
| TGTAAGAAGAGTAGATCAAA+TGG | - | chr5_2:12600914-12600933 | Msa0757650:intron | 30.0% | |
| ! | GTTTCTCTAATAGTTTTCCT+AGG | + | chr5_2:12600972-12600991 | None:intergenic | 30.0% |
| AACCATTAGAAAGGATTTAG+AGG | - | chr5_2:12600989-12601008 | Msa0757650:intron | 30.0% | |
| TGGTTTATGATAGAACACTA+AGG | - | chr5_2:12601033-12601052 | Msa0757650:intron | 30.0% | |
| AATGCTCAGGATAAGTAAAT+GGG | + | chr5_2:12601134-12601153 | None:intergenic | 30.0% | |
| AATACAAGTATTCAATGCTC+AGG | + | chr5_2:12601147-12601166 | None:intergenic | 30.0% | |
| ACTGGATTAAAAGAACCTTT+GGG | + | chr5_2:12601398-12601417 | None:intergenic | 30.0% | |
| TACTGGATTAAAAGAACCTT+TGG | + | chr5_2:12601399-12601418 | None:intergenic | 30.0% | |
| ! | AAGGTTCTTTTAATCCAGTA+AGG | - | chr5_2:12601399-12601418 | Msa0757650:intron | 30.0% |
| ! | AGGTTCTTTTAATCCAGTAA+GGG | - | chr5_2:12601400-12601419 | Msa0757650:intron | 30.0% |
| TATCATTGCTCTTATCAATG+AGG | - | chr5_2:12601475-12601494 | Msa0757650:intron | 30.0% | |
| !!! | TTCTCCAAACTTCTTGTTTT+GGG | - | chr5_2:12601699-12601718 | Msa0757650:intron | 30.0% |
| !! | TTTTAAGTACAATGTCCGAT+TGG | - | chr5_2:12601855-12601874 | Msa0757650:CDS | 30.0% |
| ! | CTTTTCACATAGATCAAGAA+AGG | + | chr5_2:12601924-12601943 | None:intergenic | 30.0% |
| ATTCTTTGTGGTTGTTTACT+TGG | - | chr5_2:12601970-12601989 | Msa0757650:CDS | 30.0% | |
| AATTAATAGCATTTAGTGCC+TGG | + | chr5_2:12601997-12602016 | None:intergenic | 30.0% | |
| GGCACTAAATGCTATTAATT+TGG | - | chr5_2:12601997-12602016 | Msa0757650:CDS | 30.0% | |
| GGATTCATTGTGATAAGAAA+TGG | - | chr5_2:12602028-12602047 | Msa0757650:CDS | 30.0% | |
| GTTCAATTTCCCATATCAAT+TGG | - | chr5_2:12602087-12602106 | Msa0757650:CDS | 30.0% | |
| GTGTATATTAAGATGCTATG+CGG | - | chr5_2:12602561-12602580 | Msa0757650:intron | 30.0% | |
| ATAAAAAAAATGCCAAGGAG+AGG | + | chr5_2:12602592-12602611 | None:intergenic | 30.0% | |
| !! | ACCTAATTCGGTTTGGATTA+GGG | + | chr5_2:12599259-12599278 | None:intergenic | 35.0% |
| !! | AACCTAATTCGGTTTGGATT+AGG | + | chr5_2:12599260-12599279 | None:intergenic | 35.0% |
| CACAAAAACCTAATTCGGTT+TGG | + | chr5_2:12599266-12599285 | None:intergenic | 35.0% | |
| ! | CAAACCGAATTAGGTTTTTG+TGG | - | chr5_2:12599264-12599283 | Msa0757650:three_prime_UTR | 35.0% |
| GCAACCACAAAAACCTAATT+CGG | + | chr5_2:12599271-12599290 | None:intergenic | 35.0% | |
| ! | AAGGCTGAAATAGAGTTGAT+GGG | + | chr5_2:12599391-12599410 | None:intergenic | 35.0% |
| AATGTTTCAGAATCTGGGTA+TGG | - | chr5_2:12599513-12599532 | Msa0757650:CDS | 35.0% | |
| TGGTTCAATTCTGTTAAAGC+AGG | - | chr5_2:12599533-12599552 | Msa0757650:CDS | 35.0% | |
| TTCAATTCTGTTAAAGCAGG+TGG | - | chr5_2:12599536-12599555 | Msa0757650:CDS | 35.0% | |
| !! | AGCATTCAGCTTTGAAAGAT+TGG | + | chr5_2:12599663-12599682 | None:intergenic | 35.0% |
| ! | AAGCTGAATGCTTCGATTTT+CGG | - | chr5_2:12599671-12599690 | Msa0757650:CDS | 35.0% |
| TTCGCGAAACAATAGTAACA+AGG | - | chr5_2:12599699-12599718 | Msa0757650:CDS | 35.0% | |
| ! | GGAGTATTAAACCTTGTTAC+TGG | + | chr5_2:12599740-12599759 | None:intergenic | 35.0% |
| TGCTATTCAAGCAATAACGT+TGG | - | chr5_2:12599815-12599834 | Msa0757650:CDS | 35.0% | |
| TTCAAGGGAAGAACTCATAA+AGG | - | chr5_2:12599956-12599975 | Msa0757650:intron | 35.0% | |
| TCAAGGGAAGAACTCATAAA+GGG | - | chr5_2:12599957-12599976 | Msa0757650:intron | 35.0% | |
| TGTATGGTCCTTTGAATTTC+GGG | - | chr5_2:12600023-12600042 | Msa0757650:intron | 35.0% | |
| TAGTTGGAGGATTCAGAATT+CGG | - | chr5_2:12600063-12600082 | Msa0757650:intron | 35.0% | |
| TAGGATAGGCTTATTGGTAT+TGG | + | chr5_2:12600296-12600315 | None:intergenic | 35.0% | |
| AATGCAGTATGTAGTTGTAG+TGG | - | chr5_2:12600403-12600422 | Msa0757650:intron | 35.0% | |
| AACCCGCATCAGTAATATAA+AGG | + | chr5_2:12600541-12600560 | None:intergenic | 35.0% | |
| GGTGAGGAGAATATAAATCA+TGG | + | chr5_2:12600581-12600600 | None:intergenic | 35.0% | |
| ATCTCACTGGAAATCAGTAA+TGG | + | chr5_2:12600602-12600621 | None:intergenic | 35.0% | |
| TCTACCAACTTCTCTACTAT+AGG | + | chr5_2:12600843-12600862 | None:intergenic | 35.0% | |
| AAGAAGAGTAGATCAAATGG+AGG | - | chr5_2:12600917-12600936 | Msa0757650:intron | 35.0% | |
| GACCTCTAAATCCTTTCTAA+TGG | + | chr5_2:12600994-12601013 | None:intergenic | 35.0% | |
| ! | CAATGAGTTGGATCCAAATA+TGG | - | chr5_2:12601013-12601032 | Msa0757650:intron | 35.0% |
| CAATGCTCAGGATAAGTAAA+TGG | + | chr5_2:12601135-12601154 | None:intergenic | 35.0% | |
| GATCCTGATAACATCTTCAA+GGG | + | chr5_2:12601194-12601213 | None:intergenic | 35.0% | |
| TGATCCTGATAACATCTTCA+AGG | + | chr5_2:12601195-12601214 | None:intergenic | 35.0% | |
| TGTGAAGATGAACAAGCAAT+TGG | - | chr5_2:12601272-12601291 | Msa0757650:intron | 35.0% | |
| AGCAATGATACAAACAGTTG+AGG | + | chr5_2:12601465-12601484 | None:intergenic | 35.0% | |
| !!! | AAGTCAGTTTTGTTGATTGC+AGG | - | chr5_2:12601533-12601552 | Msa0757650:intron | 35.0% |
| !! | GTTTTGTTGATTGCAGGTTA+AGG | - | chr5_2:12601539-12601558 | Msa0757650:intron | 35.0% |
| AGAATGCATATCAAGACTCA+TGG | + | chr5_2:12601680-12601699 | None:intergenic | 35.0% | |
| !! | CTTCTCCAAACTTCTTGTTT+TGG | - | chr5_2:12601698-12601717 | Msa0757650:intron | 35.0% |
| !!! | TCTCCAAACTTCTTGTTTTG+GGG | - | chr5_2:12601700-12601719 | Msa0757650:intron | 35.0% |
| TATCCCCAAAACAAGAAGTT+TGG | + | chr5_2:12601706-12601725 | None:intergenic | 35.0% | |
| TTCTCTACAGTCTACAAAAC+TGG | - | chr5_2:12601729-12601748 | Msa0757650:intron | 35.0% | |
| ACAAACTAGACACTTGTTTG+TGG | + | chr5_2:12601761-12601780 | None:intergenic | 35.0% | |
| GATACGGCTAAAATACCAAT+CGG | + | chr5_2:12601873-12601892 | None:intergenic | 35.0% | |
| ! | GCTATTAATTTGGGTGATAG+TGG | - | chr5_2:12602007-12602026 | Msa0757650:CDS | 35.0% |
| TAAAACCACAATCCTAGCAA+TGG | - | chr5_2:12602166-12602185 | Msa0757650:CDS | 35.0% | |
| AAACTTCAATCTCCATTGCT+AGG | + | chr5_2:12602181-12602200 | None:intergenic | 35.0% | |
| CAACAATGATATTGTTGGAG+TGG | - | chr5_2:12602316-12602335 | Msa0757650:exon | 35.0% | |
| AAGTATTCCTAAGTGTAGCA+TGG | + | chr5_2:12602674-12602693 | None:intergenic | 35.0% | |
| TCCCTAATCCAAACCGAATT+AGG | - | chr5_2:12599255-12599274 | Msa0757650:three_prime_UTR | 40.0% | |
| TGAAGACGAGGAATCGATTA+AGG | + | chr5_2:12599329-12599348 | None:intergenic | 40.0% | |
| !! | TAGAGTTGATGGGAGAAAGA+GGG | + | chr5_2:12599381-12599400 | None:intergenic | 40.0% |
| !! | ATAGAGTTGATGGGAGAAAG+AGG | + | chr5_2:12599382-12599401 | None:intergenic | 40.0% |
| GAAGGCTGAAATAGAGTTGA+TGG | + | chr5_2:12599392-12599411 | None:intergenic | 40.0% | |
| AATTCTGTTAAAGCAGGTGG+TGG | - | chr5_2:12599539-12599558 | Msa0757650:CDS | 40.0% | |
| !!! | GGAATGCACTTTTTCATCCA+AGG | - | chr5_2:12599571-12599590 | Msa0757650:CDS | 40.0% |
| AACATAGTGTGCCAGTAACA+AGG | - | chr5_2:12599726-12599745 | Msa0757650:intron | 40.0% | |
| AAGGAAGAAAGAGACGAAAC+AGG | + | chr5_2:12599761-12599780 | None:intergenic | 40.0% | |
| CGTTGGTGCAAGAAAATCAA+TGG | - | chr5_2:12599832-12599851 | Msa0757650:CDS | 40.0% | |
| TTCACCTTCCAATGCTATTC+TGG | - | chr5_2:12599859-12599878 | Msa0757650:CDS | 40.0% | |
| TCACCTTCCAATGCTATTCT+GGG | - | chr5_2:12599860-12599879 | Msa0757650:CDS | 40.0% | |
| AACATCTCCCAGAATAGCAT+TGG | + | chr5_2:12599870-12599889 | None:intergenic | 40.0% | |
| CAAGATTTCACAAAGCATGC+TGG | - | chr5_2:12599926-12599945 | Msa0757650:CDS | 40.0% | |
| !! | GTTCCACTTTTGATGCTAGT+TGG | - | chr5_2:12600047-12600066 | Msa0757650:intron | 40.0% |
| AGTTGGAGGATTCAGAATTC+GGG | - | chr5_2:12600064-12600083 | Msa0757650:intron | 40.0% | |
| GTCGAGAAATTCTTTGTCCA+CGG | + | chr5_2:12600103-12600122 | None:intergenic | 40.0% | |
| ! | ATCTTATTCTGCTTGCTGCT+TGG | - | chr5_2:12600123-12600142 | Msa0757650:intron | 40.0% |
| TTTCCAGTTGTTCATCAGGA+GGG | + | chr5_2:12600183-12600202 | None:intergenic | 40.0% | |
| ! | TTTTCCAGTTGTTCATCAGG+AGG | + | chr5_2:12600184-12600203 | None:intergenic | 40.0% |
| ! | GAGTTTTCCAGTTGTTCATC+AGG | + | chr5_2:12600187-12600206 | None:intergenic | 40.0% |
| ACTGGAAATCAGTAATGGTG+AGG | + | chr5_2:12600597-12600616 | None:intergenic | 40.0% | |
| CTACTACGTGTTGTATGGTA+CGG | - | chr5_2:12600695-12600714 | Msa0757650:CDS | 40.0% | |
| AGACTAGACAGGATAGGATT+AGG | - | chr5_2:12600796-12600815 | Msa0757650:intron | 40.0% | |
| TAGGATTAGGAATGACACAG+TGG | - | chr5_2:12600809-12600828 | Msa0757650:intron | 40.0% | |
| AGGATTAGGAATGACACAGT+GGG | - | chr5_2:12600810-12600829 | Msa0757650:intron | 40.0% | |
| AGCACCTATAGTAGAGAAGT+TGG | - | chr5_2:12600836-12600855 | Msa0757650:intron | 40.0% | |
| TCTTCTTACAACGGCATCTA+CGG | + | chr5_2:12600904-12600923 | None:intergenic | 40.0% | |
| AAAGAGGTAGAGAAAGACCT+AGG | - | chr5_2:12600952-12600971 | Msa0757650:intron | 40.0% | |
| GGATTTAGAGGTCAATGAGT+TGG | - | chr5_2:12601001-12601020 | Msa0757650:intron | 40.0% | |
| AAGCCCTTGAAGATGTTATC+AGG | - | chr5_2:12601188-12601207 | Msa0757650:intron | 40.0% | |
| TTACCTACCACATCCAGATA+AGG | - | chr5_2:12601217-12601236 | Msa0757650:intron | 40.0% | |
| GAAGGCTCACTCAAAAACAA+AGG | - | chr5_2:12601430-12601449 | Msa0757650:intron | 40.0% | |
| ! | TCACTCAAAAACAAAGGCGT+TGG | - | chr5_2:12601436-12601455 | Msa0757650:intron | 40.0% |
| !! | CACTCAAAAACAAAGGCGTT+GGG | - | chr5_2:12601437-12601456 | Msa0757650:intron | 40.0% |
| TAGACACTTGTTTGTGGTAC+AGG | + | chr5_2:12601755-12601774 | None:intergenic | 40.0% | |
| GCCTTCAGTGAATCAAGATA+CGG | + | chr5_2:12601889-12601908 | None:intergenic | 40.0% | |
| ATTTCCCATATCAATTGGCG+AGG | - | chr5_2:12602092-12602111 | Msa0757650:CDS | 40.0% | |
| AATCTCCATTGCTAGGATTG+TGG | + | chr5_2:12602174-12602193 | None:intergenic | 40.0% | |
| ATCATTGTTGCTGGAACAGA+TGG | - | chr5_2:12602275-12602294 | Msa0757650:CDS | 40.0% | |
| GATATTGTTGGAGTGGTTGT+AGG | - | chr5_2:12602323-12602342 | Msa0757650:five_prime_UTR | 40.0% | |
| !! | GAGTATGGATACCGATTTGA+TGG | - | chr5_2:12602458-12602477 | Msa0757650:intron | 40.0% |
| !! | TATGGATACCGATTTGATGG+AGG | - | chr5_2:12602461-12602480 | Msa0757650:intron | 40.0% |
| CAAGTTTGCCTCCATCAAAT+CGG | + | chr5_2:12602472-12602491 | None:intergenic | 40.0% | |
| TGTAAGACACGACAACTGTT+AGG | + | chr5_2:12602499-12602518 | None:intergenic | 40.0% | |
| ! | ATATCACTCATTGACTGAGC+TGG | + | chr5_2:12602525-12602544 | None:intergenic | 40.0% |
| CGATTCCTCGTCTTCACAAT+CGG | - | chr5_2:12599333-12599352 | Msa0757650:three_prime_UTR | 45.0% | |
| ! | TCATACCGATTGTGAAGACG+AGG | + | chr5_2:12599341-12599360 | None:intergenic | 45.0% |
| ! | TCTCCCAGAATAGCATTGGA+AGG | + | chr5_2:12599866-12599885 | None:intergenic | 45.0% |
| CATGCTGGTGTGTACTTCAA+GGG | - | chr5_2:12599941-12599960 | Msa0757650:CDS | 45.0% | |
| ACTCATAAAGGGTTTGTGCG+AGG | - | chr5_2:12599968-12599987 | Msa0757650:intron | 45.0% | |
| !! | AGACCGCAACAGGTTTTGTA+TGG | - | chr5_2:12600007-12600026 | Msa0757650:intron | 45.0% |
| GGACCATACAAAACCTGTTG+CGG | + | chr5_2:12600013-12600032 | None:intergenic | 45.0% | |
| CCTCCAACTAGCATCAAAAG+TGG | + | chr5_2:12600053-12600072 | None:intergenic | 45.0% | |
| !! | CCACTTTTGATGCTAGTTGG+AGG | - | chr5_2:12600050-12600069 | Msa0757650:intron | 45.0% |
| ! | CAGAATTCGGGTTTGCTTCA+TGG | - | chr5_2:12600076-12600095 | Msa0757650:intron | 45.0% |
| ACTGGAAAACTCCTCCACTT+TGG | - | chr5_2:12600195-12600214 | Msa0757650:intron | 45.0% | |
| GTACATGTTAGCCAAAGTGG+AGG | + | chr5_2:12600209-12600228 | None:intergenic | 45.0% | |
| CACGTACATGTTAGCCAAAG+TGG | + | chr5_2:12600212-12600231 | None:intergenic | 45.0% | |
| GCAGTATGTAGTTGTAGTGG+TGG | - | chr5_2:12600406-12600425 | Msa0757650:intron | 45.0% | |
| CAGGAAACTTGGTATCTCAC+TGG | + | chr5_2:12600615-12600634 | None:intergenic | 45.0% | |
| TGTTGTATGGTACGGAGTGT+TGG | - | chr5_2:12600703-12600722 | Msa0757650:CDS | 45.0% | |
| ! | GTTGTATGGTACGGAGTGTT+GGG | - | chr5_2:12600704-12600723 | Msa0757650:CDS | 45.0% |
| CACTTACTTGACTCTCGTGT+TGG | + | chr5_2:12600740-12600759 | None:intergenic | 45.0% | |
| CGAGAGTCAAGTAAGTGTAG+CGG | - | chr5_2:12600743-12600762 | Msa0757650:CDS | 45.0% | |
| ! | AAGTAAGTGTAGCGGAGATG+AGG | - | chr5_2:12600751-12600770 | Msa0757650:CDS | 45.0% |
| GATGAGTGGTAAGACTAGAC+AGG | - | chr5_2:12600785-12600804 | Msa0757650:intron | 45.0% | |
| GTGGTAAGACTAGACAGGAT+AGG | - | chr5_2:12600790-12600809 | Msa0757650:intron | 45.0% | |
| GGATTAGGAATGACACAGTG+GGG | - | chr5_2:12600811-12600830 | Msa0757650:intron | 45.0% | |
| GATTAGGAATGACACAGTGG+GGG | - | chr5_2:12600812-12600831 | Msa0757650:intron | 45.0% | |
| CTTCTTACAACGGCATCTAC+GGG | + | chr5_2:12600903-12600922 | None:intergenic | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | - | chr5_2:12600926-12600945 | Msa0757650:intron | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | - | chr5_2:12600936-12600955 | Msa0757650:intron | 45.0% | |
| !! | CAAGCAATTGGTGTTGCAGA+TGG | - | chr5_2:12601284-12601303 | Msa0757650:intron | 45.0% |
| !! | ATTGGTGTTGCAGATGGTGT+TGG | - | chr5_2:12601290-12601309 | Msa0757650:intron | 45.0% |
| !! | GGCAGATGTTGGTGTTAATG+CGG | - | chr5_2:12601319-12601338 | Msa0757650:intron | 45.0% |
| !! | GCAGATGTTGGTGTTAATGC+GGG | - | chr5_2:12601320-12601339 | Msa0757650:intron | 45.0% |
| GGAATTGGCTACAAGTTCCT+GGG | + | chr5_2:12601354-12601373 | None:intergenic | 45.0% | |
| TCGAATTGCTCTTGCGGAAT+TGG | + | chr5_2:12601369-12601388 | None:intergenic | 45.0% | |
| TTCCTCTCGAATTGCTCTTG+CGG | + | chr5_2:12601375-12601394 | None:intergenic | 45.0% | |
| !! | TCCAGTAAGGGTGTTAGAGA+AGG | - | chr5_2:12601412-12601431 | Msa0757650:intron | 45.0% |
| GCTTCATGCATACTGAACAC+TGG | - | chr5_2:12601583-12601602 | Msa0757650:intron | 45.0% | |
| GCCGTATCTTGATTCACTGA+AGG | - | chr5_2:12601885-12601904 | Msa0757650:CDS | 45.0% | |
| TGTGGTTGTTTACTTGGTCC+AGG | - | chr5_2:12601976-12601995 | Msa0757650:CDS | 45.0% | |
| AGAGCTAGGTAGATCACCTT+CGG | + | chr5_2:12602125-12602144 | None:intergenic | 45.0% | |
| TTTACAGTACCTGTTGCTCC+AGG | - | chr5_2:12602248-12602267 | Msa0757650:CDS | 45.0% | |
| ATGATATCTCCTGGAGCAAC+AGG | + | chr5_2:12602260-12602279 | None:intergenic | 45.0% | |
| CCAGCAACAATGATATCTCC+TGG | + | chr5_2:12602269-12602288 | None:intergenic | 45.0% | |
| CCAGGAGATATCATTGTTGC+TGG | - | chr5_2:12602266-12602285 | Msa0757650:CDS | 45.0% | |
| GGTGCAACTAGAGCTAGATT+AGG | - | chr5_2:12602344-12602363 | Msa0757650:five_prime_UTR | 45.0% | |
| ATCTTCTGAGCAGTTGCTTG+TGG | + | chr5_2:12602371-12602390 | None:intergenic | 45.0% | |
| TGCTCAGAAGATAGCAGCAT+TGG | - | chr5_2:12602379-12602398 | Msa0757650:five_prime_UTR | 45.0% | |
| TCAAGAGCAGCAGCTGAAAA+TGG | + | chr5_2:12602440-12602459 | None:intergenic | 45.0% | |
| TTAGCTGCCATGCTACACTT+AGG | - | chr5_2:12602664-12602683 | Msa0757650:five_prime_UTR | 45.0% | |
| ! | AGCAGGTGGTGGTGTGAAAA+AGG | - | chr5_2:12599550-12599569 | Msa0757650:CDS | 50.0% |
| GCATGCTGGTGTGTACTTCA+AGG | - | chr5_2:12599940-12599959 | Msa0757650:CDS | 50.0% | |
| GAGTTTGAGAAGACCGCAAC+AGG | - | chr5_2:12599997-12600016 | Msa0757650:intron | 50.0% | |
| GTGGAACGCCCGAAATTCAA+AGG | + | chr5_2:12600034-12600053 | None:intergenic | 50.0% | |
| ! | TATTCTGCTTGCTGCTTGGC+TGG | - | chr5_2:12600127-12600146 | Msa0757650:intron | 50.0% |
| ACTAAGTGGGATCGGCTACA+TGG | + | chr5_2:12601070-12601089 | None:intergenic | 50.0% | |
| ATGTAGCCGATCCCACTTAG+TGG | - | chr5_2:12601069-12601088 | Msa0757650:intron | 50.0% | |
| TGTAGCCGATCCCACTTAGT+GGG | - | chr5_2:12601070-12601089 | Msa0757650:intron | 50.0% | |
| CTTACCCCACTAAGTGGGAT+CGG | + | chr5_2:12601078-12601097 | None:intergenic | 50.0% | |
| CAAGCCTTACCCCACTAAGT+GGG | + | chr5_2:12601083-12601102 | None:intergenic | 50.0% | |
| CCACCTTATCTGGATGTGGT+AGG | + | chr5_2:12601223-12601242 | None:intergenic | 50.0% | |
| CCTACCACATCCAGATAAGG+TGG | - | chr5_2:12601220-12601239 | Msa0757650:intron | 50.0% | |
| ATCCAGATAAGGTGGCGACT+GGG | - | chr5_2:12601228-12601247 | Msa0757650:intron | 50.0% | |
| CGGAATTGGCTACAAGTTCC+TGG | + | chr5_2:12601355-12601374 | None:intergenic | 50.0% | |
| TTCCGCAAGAGCAATTCGAG+AGG | - | chr5_2:12601370-12601389 | Msa0757650:intron | 50.0% | |
| GCAATTCGAGAGGAACCCAA+AGG | - | chr5_2:12601380-12601399 | Msa0757650:intron | 50.0% | |
| GCCTTCTCTAACACCCTTAC+TGG | + | chr5_2:12601416-12601435 | None:intergenic | 50.0% | |
| AAGTCCCCTGTTCAACAACG+CGG | - | chr5_2:12602064-12602083 | Msa0757650:CDS | 50.0% | |
| TGAACCCGCGTTGTTGAACA+GGG | + | chr5_2:12602072-12602091 | None:intergenic | 50.0% | |
| TTGAACCCGCGTTGTTGAAC+AGG | + | chr5_2:12602073-12602092 | None:intergenic | 50.0% | |
| CGCTCCTCGCCAATTGATAT+GGG | + | chr5_2:12602099-12602118 | None:intergenic | 50.0% | |
| CCATATCAATTGGCGAGGAG+CGG | - | chr5_2:12602097-12602116 | Msa0757650:CDS | 50.0% | |
| GAAGGTGATCTACCTAGCTC+TGG | - | chr5_2:12602124-12602143 | Msa0757650:CDS | 50.0% | |
| AACTTTACCTCGCCAGAGCT+AGG | + | chr5_2:12602139-12602158 | None:intergenic | 50.0% | |
| AGCGAGCTCTTGACACGAAA+AGG | - | chr5_2:12602408-12602427 | Msa0757650:five_prime_UTR | 50.0% | |
| TCAGCTGCTGCTCTTGAGTA+TGG | - | chr5_2:12602443-12602462 | Msa0757650:intron | 50.0% | |
| CAGTTGTTCATCAGGAGGGC+TGG | + | chr5_2:12600179-12600198 | None:intergenic | 55.0% | |
| CAGCCCTCCTGATGAACAAC+TGG | - | chr5_2:12600177-12600196 | Msa0757650:intron | 55.0% | |
| GCACTATGCGGCTACAGTTG+CGG | - | chr5_2:12600488-12600507 | Msa0757650:CDS | 55.0% | |
| !! | GTATGGTACGGAGTGTTGGG+CGG | - | chr5_2:12600707-12600726 | Msa0757650:CDS | 55.0% |
| AGGATGTTGCGCTGGATGAG+TGG | - | chr5_2:12600771-12600790 | Msa0757650:CDS | 55.0% | |
| GTAGCCGATCCCACTTAGTG+GGG | - | chr5_2:12601071-12601090 | Msa0757650:intron | 55.0% | |
| CGATCCCACTTAGTGGGGTA+AGG | - | chr5_2:12601076-12601095 | Msa0757650:intron | 55.0% | |
| CCAAGCCTTACCCCACTAAG+TGG | + | chr5_2:12601084-12601103 | None:intergenic | 55.0% | |
| CCACTTAGTGGGGTAAGGCT+TGG | - | chr5_2:12601081-12601100 | Msa0757650:intron | 55.0% | |
| GTCGCCACCTTATCTGGATG+TGG | + | chr5_2:12601227-12601246 | None:intergenic | 55.0% | |
| CATCCAGATAAGGTGGCGAC+TGG | - | chr5_2:12601227-12601246 | Msa0757650:intron | 55.0% | |
| TCCAGATAAGGTGGCGACTG+GGG | - | chr5_2:12601229-12601248 | Msa0757650:intron | 55.0% | |
| ! | GGTGTTGCAGATGGTGTTGG+TGG | - | chr5_2:12601293-12601312 | Msa0757650:intron | 55.0% |
| !! | TTGCAGATGGTGTTGGTGGC+TGG | - | chr5_2:12601297-12601316 | Msa0757650:intron | 55.0% |
| !! | TGCAGATGGTGTTGGTGGCT+GGG | - | chr5_2:12601298-12601317 | Msa0757650:intron | 55.0% |
| TAATGCGGGACTGTATGCCC+AGG | - | chr5_2:12601334-12601353 | Msa0757650:intron | 55.0% | |
| AGTCCCCTGTTCAACAACGC+GGG | - | chr5_2:12602065-12602084 | Msa0757650:CDS | 55.0% | |
| GAACCCGCGTTGTTGAACAG+GGG | + | chr5_2:12602071-12602090 | None:intergenic | 55.0% | |
| CCGCTCCTCGCCAATTGATA+TGG | + | chr5_2:12602100-12602119 | None:intergenic | 55.0% | |
| !! | TGATCTACCTAGCTCTGGCG+AGG | - | chr5_2:12602129-12602148 | Msa0757650:CDS | 55.0% |
| TATGCGGCTAAGCCTCTCCT+TGG | - | chr5_2:12602577-12602596 | Msa0757650:intron | 55.0% | |
| ! | CGGGTTTGCTTCATGGACCG+TGG | - | chr5_2:12600083-12600102 | Msa0757650:intron | 60.0% |
| CTACAGTTGCGGCCGTGATG+TGG | - | chr5_2:12600499-12600518 | Msa0757650:CDS | 60.0% | |
| GGAGCCCTGCAACCACATCA+CGG | + | chr5_2:12600514-12600533 | None:intergenic | 60.0% | |
| CGGAGATGAGGATGTTGCGC+TGG | - | chr5_2:12600763-12600782 | Msa0757650:CDS | 60.0% | |
| CCAGATAAGGTGGCGACTGG+GGG | - | chr5_2:12601230-12601249 | Msa0757650:intron | 60.0% | |
| !! | GTTGGTGGCTGGGCAGATGT+TGG | - | chr5_2:12601308-12601327 | Msa0757650:intron | 60.0% |
| TGCGGCCGTGATGTGGTTGC+AGG | - | chr5_2:12600506-12600525 | Msa0757650:CDS | 65.0% | |
| GCGGCCGTGATGTGGTTGCA+GGG | - | chr5_2:12600507-12600526 | Msa0757650:CDS | 65.0% | |
| CCCCCAGTCGCCACCTTATC+TGG | + | chr5_2:12601233-12601252 | None:intergenic | 65.0% | |
| TAAGGTGGCGACTGGGGGAG+AGG | - | chr5_2:12601235-12601254 | Msa0757650:intron | 65.0% | |
| ! | TTGGCGAGGAGCGGTACCGA+AGG | - | chr5_2:12602106-12602125 | Msa0757650:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 12599189 | 12602776 | 12599189 | ID=Msa0757650;Name=Msa0757650 |
| chr5_2 | mRNA | 12599189 | 12602776 | 12599189 | ID=Msa0757650-mRNA-1;Parent=Msa0757650;Name=Msa0757650-mRNA-1;_AED=0.01;_eAED=0.01;_QI=290|1|1|1|0.75|0.6|5|235|450 |
| chr5_2 | exon | 12599189 | 12599720 | 12599189 | ID=Msa0757650-mRNA-1:exon:5682;Parent=Msa0757650-mRNA-1 |
| chr5_2 | exon | 12599815 | 12599967 | 12599815 | ID=Msa0757650-mRNA-1:exon:5681;Parent=Msa0757650-mRNA-1 |
| chr5_2 | exon | 12600469 | 12600793 | 12600469 | ID=Msa0757650-mRNA-1:exon:5680;Parent=Msa0757650-mRNA-1 |
| chr5_2 | exon | 12601741 | 12602442 | 12601741 | ID=Msa0757650-mRNA-1:exon:5679;Parent=Msa0757650-mRNA-1 |
| chr5_2 | exon | 12602611 | 12602776 | 12602611 | ID=Msa0757650-mRNA-1:exon:5678;Parent=Msa0757650-mRNA-1 |
| chr5_2 | five_prime_UTR | 12602611 | 12602776 | 12602611 | ID=Msa0757650-mRNA-1:five_prime_utr;Parent=Msa0757650-mRNA-1 |
| chr5_2 | five_prime_UTR | 12602319 | 12602442 | 12602319 | ID=Msa0757650-mRNA-1:five_prime_utr;Parent=Msa0757650-mRNA-1 |
| chr5_2 | CDS | 12601741 | 12602318 | 12601741 | ID=Msa0757650-mRNA-1:cds;Parent=Msa0757650-mRNA-1 |
| chr5_2 | CDS | 12600469 | 12600793 | 12600469 | ID=Msa0757650-mRNA-1:cds;Parent=Msa0757650-mRNA-1 |
| chr5_2 | CDS | 12599815 | 12599967 | 12599815 | ID=Msa0757650-mRNA-1:cds;Parent=Msa0757650-mRNA-1 |
| chr5_2 | CDS | 12599424 | 12599720 | 12599424 | ID=Msa0757650-mRNA-1:cds;Parent=Msa0757650-mRNA-1 |
| chr5_2 | three_prime_UTR | 12599189 | 12599423 | 12599189 | ID=Msa0757650-mRNA-1:three_prime_utr;Parent=Msa0757650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
