Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0633310 | XP_003605165.4 | 89.700 | 466 | 26 | 3 | 1 | 463 | 1 | 447 | 0.0 | 814 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0633310 | sp|O22145|OSGP2_ARATH | 65.517 | 493 | 118 | 8 | 3 | 463 | 4 | 476 | 0.0 | 639 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0007570 | Msa0633310 | 0.824468 | 7.940107e-54 | -8.615850e-47 |
Msa0018010 | Msa0633310 | 0.809192 | 2.136249e-50 | -8.615850e-47 |
Msa0025340 | Msa0633310 | 0.834752 | 2.499355e-56 | -8.615850e-47 |
Msa0029280 | Msa0633310 | 0.823878 | 1.092484e-53 | -8.615850e-47 |
Msa0032990 | Msa0633310 | 0.810042 | 1.402813e-50 | -8.615850e-47 |
Msa0072910 | Msa0633310 | 0.808159 | 3.551314e-50 | -8.615850e-47 |
Msa0076990 | Msa0633310 | 0.827696 | 1.356320e-54 | -8.615850e-47 |
Msa0116200 | Msa0633310 | 0.808442 | 3.091502e-50 | -8.615850e-47 |
Msa0614060 | Msa0633310 | 0.810735 | 9.942021e-51 | -8.615850e-47 |
Msa0624700 | Msa0633310 | 0.807217 | 5.629043e-50 | -8.615850e-47 |
Msa0633310 | Msa0633720 | 0.806887 | 6.611976e-50 | -8.615850e-47 |
Msa0633310 | Msa0638550 | 0.816487 | 5.393252e-52 | -8.615850e-47 |
Msa0633310 | Msa0643330 | 0.802154 | 6.418958e-49 | -8.615850e-47 |
Msa0633310 | Msa0662670 | 0.805814 | 1.112852e-49 | -8.615850e-47 |
Msa0633310 | Msa0663580 | 0.827050 | 1.938200e-54 | -8.615850e-47 |
Msa0633310 | Msa0669160 | 0.822318 | 2.526089e-53 | -8.615850e-47 |
Msa0633310 | Msa0681100 | 0.810760 | 9.818516e-51 | -8.615850e-47 |
Msa0633310 | Msa0688880 | 0.809811 | 1.573552e-50 | -8.615850e-47 |
Msa0633310 | Msa0697230 | 0.816357 | 5.766043e-52 | -8.615850e-47 |
Msa0633310 | Msa0702020 | 0.811228 | 7.777230e-51 | -8.615850e-47 |
Msa0633310 | Msa0702360 | 0.804424 | 2.174728e-49 | -8.615850e-47 |
Msa0633310 | Msa0708870 | 0.802598 | 5.200380e-49 | -8.615850e-47 |
Msa0633310 | Msa0712580 | 0.831065 | 2.061267e-55 | -8.615850e-47 |
Msa0633310 | Msa0719330 | 0.801306 | 9.583089e-49 | -8.615850e-47 |
Msa0633310 | Msa0720000 | 0.834699 | 2.576877e-56 | -8.615850e-47 |
Msa0633310 | Msa0745270 | 0.813814 | 2.115677e-51 | -8.615850e-47 |
Msa0633310 | Msa0750490 | 0.814313 | 1.641826e-51 | -8.615850e-47 |
Msa0633310 | Msa0762480 | 0.802780 | 4.769592e-49 | -8.615850e-47 |
Msa0633310 | Msa0766540 | 0.809107 | 2.228471e-50 | -8.615850e-47 |
Msa0633310 | Msa0772160 | 0.803156 | 3.987033e-49 | -8.615850e-47 |
Msa0633310 | Msa0785670 | 0.811001 | 8.707940e-51 | -8.615850e-47 |
Msa0633310 | Msa0786330 | 0.806519 | 7.908498e-50 | -8.615850e-47 |
Msa0633310 | Msa0807850 | 0.812405 | 4.309971e-51 | -8.615850e-47 |
Msa0633310 | Msa0817810 | 0.809709 | 1.654989e-50 | -8.615850e-47 |
Msa0633310 | Msa0841350 | 0.844499 | 7.281743e-59 | -8.615850e-47 |
Msa0633310 | Msa0842370 | 0.803025 | 4.243661e-49 | -8.615850e-47 |
Msa0633310 | Msa0849290 | 0.809790 | 1.589830e-50 | -8.615850e-47 |
Msa0633310 | Msa0872800 | 0.841961 | 3.457697e-58 | -8.615850e-47 |
Msa0633310 | Msa0928060 | 0.806295 | 8.817409e-50 | -8.615850e-47 |
Msa0633310 | Msa0968970 | 0.833591 | 4.885343e-56 | -8.615850e-47 |
Msa0633310 | Msa0998660 | 0.816735 | 4.745436e-52 | -8.615850e-47 |
Msa0633310 | Msa1013560 | 0.809299 | 2.026299e-50 | -8.615850e-47 |
Msa0633310 | Msa1028720 | 0.808833 | 2.549759e-50 | -8.615850e-47 |
Msa0633310 | Msa1028780 | 0.806670 | 7.348095e-50 | -8.615850e-47 |
Msa0633310 | Msa1033460 | 0.809882 | 1.519049e-50 | -8.615850e-47 |
Msa0633310 | Msa1033710 | 0.811669 | 6.235790e-51 | -8.615850e-47 |
Msa0633310 | Msa1038040 | 0.813143 | 2.971255e-51 | -8.615850e-47 |
Msa0633310 | Msa1038230 | 0.811259 | 7.658004e-51 | -8.615850e-47 |
Msa0633310 | Msa1044050 | 0.805264 | 1.451488e-49 | -8.615850e-47 |
Msa0633310 | Msa1056790 | 0.818593 | 1.807859e-52 | -8.615850e-47 |
Msa0633310 | Msa1068370 | 0.805116 | 1.559079e-49 | -8.615850e-47 |
Msa0633310 | Msa1078600 | 0.802967 | 4.363620e-49 | -8.615850e-47 |
Msa0633310 | Msa1078770 | 0.804338 | 2.266377e-49 | -8.615850e-47 |
Msa0633310 | Msa1084210 | 0.807166 | 5.772605e-50 | -8.615850e-47 |
Msa0633310 | Msa1121740 | 0.805559 | 1.259320e-49 | -8.615850e-47 |
Msa0633310 | Msa1128230 | 0.805923 | 1.055698e-49 | -8.615850e-47 |
Msa0633310 | Msa1137800 | 0.828111 | 1.078126e-54 | -8.615850e-47 |
Msa0633310 | Msa1157030 | 0.802454 | 5.567152e-49 | -8.615850e-47 |
Msa0633310 | Msa1160470 | 0.815870 | 7.407213e-52 | -8.615850e-47 |
Msa0633310 | Msa1161520 | 0.802143 | 6.451435e-49 | -8.615850e-47 |
Msa0633310 | Msa1198280 | 0.808198 | 3.484423e-50 | -8.615850e-47 |
Msa0633310 | Msa1215790 | 0.808693 | 2.731624e-50 | -8.615850e-47 |
Msa0633310 | Msa1223520 | 0.801201 | 1.006819e-48 | -8.615850e-47 |
Msa0633310 | Msa1225240 | 0.814869 | 1.236485e-51 | -8.615850e-47 |
Msa0633310 | Msa1269370 | 0.817850 | 2.661855e-52 | -8.615850e-47 |
Msa0633310 | Msa1270860 | 0.805102 | 1.569711e-49 | -8.615850e-47 |
Msa0633310 | Msa1286470 | 0.809870 | 1.528081e-50 | -8.615850e-47 |
Msa0633310 | Msa1288380 | 0.819605 | 1.064043e-52 | -8.615850e-47 |
Msa0633310 | Msa1295220 | 0.834594 | 2.739226e-56 | -8.615850e-47 |
Msa0633310 | Msa1303130 | 0.808316 | 3.287795e-50 | -8.615850e-47 |
Msa0633310 | Msa1308010 | 0.818990 | 1.468709e-52 | -8.615850e-47 |
Msa0633310 | Msa1335210 | 0.817172 | 3.785228e-52 | -8.615850e-47 |
Msa0633310 | Msa1345470 | 0.814252 | 1.693413e-51 | -8.615850e-47 |
Msa0633310 | Msa1349490 | 0.813321 | 2.715052e-51 | -8.615850e-47 |
Msa0633310 | Msa1369390 | 0.816181 | 6.311976e-52 | -8.615850e-47 |
Msa0633310 | Msa1373570 | 0.810197 | 1.299112e-50 | -8.615850e-47 |
Msa0633310 | Msa1393550 | 0.806591 | 7.637955e-50 | -8.615850e-47 |
Msa0633310 | Msa1403840 | 0.801090 | 1.060768e-48 | -8.615850e-47 |
Msa0633310 | Msa1423270 | 0.843588 | 1.277723e-58 | -8.615850e-47 |
Msa0633310 | Msa1426310 | 0.807145 | 5.832086e-50 | -8.615850e-47 |
Msa0633310 | Msa1430630 | 0.811402 | 7.129235e-51 | -8.615850e-47 |
Msa0633310 | Msa1453180 | 0.800673 | 1.290499e-48 | -8.615850e-47 |
Msa0633310 | Msa1456170 | 0.805576 | 1.248582e-49 | -8.615850e-47 |
Msa0121080 | Msa0633310 | 0.851758 | 7.203106e-61 | -8.615850e-47 |
Msa0128840 | Msa0633310 | 0.819992 | 8.677714e-53 | -8.615850e-47 |
Msa0131640 | Msa0633310 | 0.834974 | 2.197118e-56 | -8.615850e-47 |
Msa0155540 | Msa0633310 | 0.811105 | 8.266383e-51 | -8.615850e-47 |
Msa0160080 | Msa0633310 | 0.824473 | 7.918463e-54 | -8.615850e-47 |
Msa0160120 | Msa0633310 | 0.830586 | 2.702185e-55 | -8.615850e-47 |
Msa0172820 | Msa0633310 | 0.805516 | 1.285580e-49 | -8.615850e-47 |
Msa0186380 | Msa0633310 | 0.819332 | 1.228103e-52 | -8.615850e-47 |
Msa0209370 | Msa0633310 | 0.812178 | 4.832238e-51 | -8.615850e-47 |
Msa0209590 | Msa0633310 | 0.816967 | 4.209476e-52 | -8.615850e-47 |
Msa0220050 | Msa0633310 | 0.828250 | 9.979544e-55 | -8.615850e-47 |
Msa0365350 | Msa0633310 | 0.802448 | 5.584459e-49 | -8.615850e-47 |
Msa0367600 | Msa0633310 | 0.830463 | 2.896142e-55 | -8.615850e-47 |
Msa0373640 | Msa0633310 | 0.801685 | 8.014265e-49 | -8.615850e-47 |
Msa0375800 | Msa0633310 | 0.824236 | 9.002733e-54 | -8.615850e-47 |
Msa0384570 | Msa0633310 | 0.800235 | 1.585086e-48 | -8.615850e-47 |
Msa0385850 | Msa0633310 | 0.833133 | 6.351384e-56 | -8.615850e-47 |
Msa0385870 | Msa0633310 | 0.807656 | 4.544312e-50 | -8.615850e-47 |
Msa0387120 | Msa0633310 | 0.804077 | 2.568039e-49 | -8.615850e-47 |
Msa0389570 | Msa0633310 | 0.823728 | 1.184901e-53 | -8.615850e-47 |
Msa0402490 | Msa0633310 | 0.804024 | 2.634553e-49 | -8.615850e-47 |
Msa0415210 | Msa0633310 | 0.828594 | 8.244596e-55 | -8.615850e-47 |
Msa0416530 | Msa0633310 | 0.803356 | 3.624706e-49 | -8.615850e-47 |
Msa0418790 | Msa0633310 | 0.813193 | 2.897162e-51 | -8.615850e-47 |
Msa0420280 | Msa0633310 | 0.812232 | 4.701719e-51 | -8.615850e-47 |
Msa0425150 | Msa0633310 | 0.818208 | 2.209573e-52 | -8.615850e-47 |
Msa0447830 | Msa0633310 | 0.825319 | 5.000244e-54 | -8.615850e-47 |
Msa0453610 | Msa0633310 | 0.815170 | 1.060405e-51 | -8.615850e-47 |
Msa0474220 | Msa0633310 | 0.808960 | 2.395629e-50 | -8.615850e-47 |
Msa0269430 | Msa0633310 | 0.813438 | 2.559644e-51 | -8.615850e-47 |
Msa0290590 | Msa0633310 | 0.812427 | 4.262552e-51 | -8.615850e-47 |
Msa0292150 | Msa0633310 | 0.810604 | 1.061224e-50 | -8.615850e-47 |
Msa0309490 | Msa0633310 | 0.805860 | 1.088569e-49 | -8.615850e-47 |
Msa0330240 | Msa0633310 | 0.829007 | 6.548755e-55 | -8.615850e-47 |
Msa0504360 | Msa0633310 | 0.816310 | 5.906815e-52 | -8.615850e-47 |
Msa0515730 | Msa0633310 | 0.803654 | 3.144635e-49 | -8.615850e-47 |
Msa0523400 | Msa0633310 | 0.810290 | 1.240664e-50 | -8.615850e-47 |
Msa0540120 | Msa0633310 | 0.833655 | 4.706491e-56 | -8.615850e-47 |
Msa0558010 | Msa0633310 | 0.806763 | 7.024609e-50 | -8.615850e-47 |
Msa0576550 | Msa0633310 | 0.809972 | 1.452742e-50 | -8.615850e-47 |
Msa0585720 | Msa0633310 | 0.812714 | 3.689913e-51 | -8.615850e-47 |
Msa0587070 | Msa0633310 | 0.800404 | 1.464204e-48 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0633310 | MtrunA17_Chr4g0011461 | 89.700 | 466 | 26 | 3 | 1 | 463 | 1 | 447 | 0.0 | 814 |
Msa0633310 | MtrunA17_Chr1g0197521 | 28.612 | 353 | 207 | 10 | 56 | 406 | 1 | 310 | 2.63e-27 | 112 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0633310 | AT2G45270.1 | 65.517 | 493 | 118 | 8 | 3 | 463 | 4 | 476 | 0.0 | 639 |
Msa0633310 | AT4G22720.1 | 25.693 | 397 | 226 | 10 | 56 | 450 | 5 | 334 | 7.00e-25 | 105 |
Msa0633310 | AT4G22720.2 | 25.693 | 397 | 226 | 10 | 56 | 450 | 5 | 334 | 7.00e-25 | 105 |
Find 142 sgRNAs with CRISPR-Local
Find 613 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCACTTAAGTTATACAATTT+TGG | 0.075571 | 4_3:+18768177 | None:intergenic |
TTTAAGAAATTTGTAATAAA+AGG | 0.124183 | 4_3:-18768105 | Msa0633310:three_prime_UTR |
TGCCGAAGAAATAGGAATTT+TGG | 0.179179 | 4_3:+18769578 | None:intergenic |
TTGGTCTATACCTTTGTTAT+TGG | 0.221333 | 4_3:-18768012 | Msa0633310:three_prime_UTR |
CGATGGAGATATTGTCGTTT+TGG | 0.239610 | 4_3:-18776826 | Msa0633310:CDS |
CTCATTCTTGCACGTGATCT+TGG | 0.264225 | 4_3:-18770357 | Msa0633310:CDS |
TCATTACTTGCCGAAGAAAT+AGG | 0.280752 | 4_3:+18769570 | None:intergenic |
TGATACTGTTTGGTTATATT+CGG | 0.283723 | 4_3:+18768327 | None:intergenic |
AACAAGGGTTCCGTATAAAA+TGG | 0.290978 | 4_3:+18777040 | None:intergenic |
GCAGACCTGCTTGTGAAATA+TGG | 0.301698 | 4_3:-18774551 | Msa0633310:CDS |
ACAATATCTCCATCGCGTTT+TGG | 0.306487 | 4_3:+18776834 | None:intergenic |
CAGAAGGCTCGGAGAATTGC+TGG | 0.308815 | 4_3:-18772542 | Msa0633310:CDS |
GTGATATTGCTTGATTATAT+CGG | 0.317386 | 4_3:+18768285 | None:intergenic |
ACCGCAGTTGCTGTTACTAT+TGG | 0.319853 | 4_3:-18773804 | Msa0633310:CDS |
ACTCAATTGCCAGTCTTACT+TGG | 0.331056 | 4_3:+18769973 | None:intergenic |
AGAAGAACCAGAAGACTTTC+TGG | 0.361040 | 4_3:-18768828 | Msa0633310:intron |
CAATCCTTATGCTGCCTCAT+TGG | 0.365186 | 4_3:+18770023 | None:intergenic |
AGATGTGAAGAGTGAAGGTT+TGG | 0.374267 | 4_3:+18776923 | None:intergenic |
ATGAATTCGTGCCGTTCTTA+AGG | 0.381153 | 4_3:+18768445 | None:intergenic |
AGTTGCTGTTACTATTGGTC+CGG | 0.382566 | 4_3:-18773799 | Msa0633310:CDS |
AATGGCTTGGACTTGATATA+AGG | 0.384502 | 4_3:-18770269 | Msa0633310:CDS |
AATTAATCAATGTCACATAA+GGG | 0.386943 | 4_3:-18768252 | Msa0633310:three_prime_UTR |
GCCTCATGAAGCCACTATCT+TGG | 0.392214 | 4_3:-18768353 | Msa0633310:three_prime_UTR |
GGCTTTAATTTACCAATTGT+TGG | 0.392882 | 4_3:-18772518 | Msa0633310:CDS |
GAATAAATTATTACCATTGT+CGG | 0.398616 | 4_3:+18769080 | None:intergenic |
TGTCTGTTGCAGGTTGTCTC+TGG | 0.399323 | 4_3:-18769198 | Msa0633310:intron |
TAATTAATCAATGTCACATA+AGG | 0.399429 | 4_3:-18768253 | Msa0633310:three_prime_UTR |
CGCTGCGGGTAGAGTGTTTG+TGG | 0.403150 | 4_3:+18776880 | None:intergenic |
TGTACGCCCAAGGTGGCCGC+TGG | 0.403286 | 4_3:-18768504 | Msa0633310:CDS |
TGCCAAAATTCCTATTTCTT+CGG | 0.408888 | 4_3:-18769580 | Msa0633310:CDS |
GGTTCTTCTGCAGGAGGTGG+AGG | 0.418700 | 4_3:+18768842 | None:intergenic |
TTAAGAAATTTGTAATAAAA+GGG | 0.419566 | 4_3:-18768104 | Msa0633310:three_prime_UTR |
ACCATTGTCGGTACAAAGCC+GGG | 0.420683 | 4_3:+18769092 | None:intergenic |
TGATATTGCTTGATTATATC+GGG | 0.421396 | 4_3:+18768286 | None:intergenic |
TCATTCTTGCACGTGATCTT+GGG | 0.424423 | 4_3:-18770356 | Msa0633310:CDS |
AAACATACCAGAAAGTCTTC+TGG | 0.427747 | 4_3:+18768821 | None:intergenic |
TTGCGTCAAACCAATATGTT+CGG | 0.427836 | 4_3:-18769170 | Msa0633310:CDS |
TCGGTACAAAGCCGGGGAGG+AGG | 0.428111 | 4_3:+18769099 | None:intergenic |
TCTGGTTCTTCTGCAGGAGG+TGG | 0.428517 | 4_3:+18768839 | None:intergenic |
AAATTTACGCGGGAAATTGT+TGG | 0.429327 | 4_3:+18776951 | None:intergenic |
GGTTGGGCCAGGGGTGCCCA+AGG | 0.430791 | 4_3:-18771151 | Msa0633310:intron |
AAGTCTTCTGGTTCTTCTGC+AGG | 0.443693 | 4_3:+18768833 | None:intergenic |
CTCAATTGCCAGTCTTACTT+GGG | 0.447580 | 4_3:+18769974 | None:intergenic |
CAAGCTGAGCCCGAACATAT+TGG | 0.448647 | 4_3:+18769160 | None:intergenic |
TACCATTGTCGGTACAAAGC+CGG | 0.451552 | 4_3:+18769091 | None:intergenic |
CAGTCATATAAGCTTTATCA+AGG | 0.452366 | 4_3:+18773838 | None:intergenic |
GTTTGTGGGGAAGATGAATT+CGG | 0.453375 | 4_3:+18776895 | None:intergenic |
ACTACCAGATGTCTTATAGA+AGG | 0.455291 | 4_3:+18769302 | None:intergenic |
CTTATGACAAGTCAGCAAAA+TGG | 0.461556 | 4_3:-18770287 | Msa0633310:CDS |
AACTAGTATGCCCTCCTCCC+CGG | 0.461584 | 4_3:-18769110 | Msa0633310:CDS |
CTACGTCAACATCTAATCCT+TGG | 0.462698 | 4_3:+18771134 | None:intergenic |
AAGTGGTGGTCCTGCTATAG+AGG | 0.468477 | 4_3:-18770244 | Msa0633310:CDS |
TACGTCAACATCTAATCCTT+GGG | 0.469460 | 4_3:+18771135 | None:intergenic |
CTTGGGCAATACATACAACT+TGG | 0.471005 | 4_3:-18770339 | Msa0633310:CDS |
ATTAATCAATGTCACATAAG+GGG | 0.473916 | 4_3:-18768251 | Msa0633310:three_prime_UTR |
GGAGCCTTCTATAAGACATC+TGG | 0.477018 | 4_3:-18769306 | Msa0633310:intron |
GATTGCAACTTCTCTTATGC+TGG | 0.480476 | 4_3:-18770005 | Msa0633310:CDS |
ATATTCGGCTTCCAAGATAG+TGG | 0.480501 | 4_3:+18768342 | None:intergenic |
ATGTGATGGACGCCAACAAT+TGG | 0.491621 | 4_3:+18772506 | None:intergenic |
TGCGTCAAACCAATATGTTC+GGG | 0.492183 | 4_3:-18769169 | Msa0633310:CDS |
GTTGCTGTTACTATTGGTCC+GGG | 0.495817 | 4_3:-18773798 | Msa0633310:CDS |
GACGTAGTGGACTCAATTGC+AGG | 0.497037 | 4_3:-18771118 | Msa0633310:intron |
GTACGCCCAAGGTGGCCGCT+GGG | 0.501523 | 4_3:-18768503 | Msa0633310:CDS |
GGTTCCAATGAGGCAGCATA+AGG | 0.503532 | 4_3:-18770027 | Msa0633310:CDS |
ATGGTTTAGGTGAGAAGTGA+CGG | 0.505000 | 4_3:-18776679 | Msa0633310:intron |
CGCCTCCATATTTCACAAGC+AGG | 0.506138 | 4_3:+18774546 | None:intergenic |
GACAAGTCAGCAAAATGGCT+TGG | 0.508751 | 4_3:-18770282 | Msa0633310:CDS |
CGGTACAAAGCCGGGGAGGA+GGG | 0.513180 | 4_3:+18769100 | None:intergenic |
TGCTATAGAGGAGCTTGCTA+AGG | 0.520558 | 4_3:-18770232 | Msa0633310:CDS |
AGAAGGCTCGGAGAATTGCT+GGG | 0.520907 | 4_3:-18772541 | Msa0633310:CDS |
GAATAGGTGTAATGGTTGCT+TGG | 0.523654 | 4_3:-18768901 | Msa0633310:intron |
GGTTTAAGTCTCTGCCTTCG+TGG | 0.527530 | 4_3:-18773777 | Msa0633310:intron |
GATGTGAAGAGTGAAGGTTT+GGG | 0.531779 | 4_3:+18776924 | None:intergenic |
CTGTTGCAGGTTGTCTCTGG+TGG | 0.533183 | 4_3:-18769195 | Msa0633310:intron |
GATACGGTTGTGAAGAAGAA+TGG | 0.534130 | 4_3:-18769138 | Msa0633310:CDS |
ATGAGTTTCAGCACTGAACA+AGG | 0.536524 | 4_3:+18777024 | None:intergenic |
CATGGAGGCTCATGCTCTAG+TGG | 0.537949 | 4_3:-18772486 | Msa0633310:CDS |
TGTTCGGGCTCAGCTTGATA+CGG | 0.538444 | 4_3:-18769154 | Msa0633310:CDS |
GGTGTAATGGTTGCTTGGAC+TGG | 0.539870 | 4_3:-18768896 | Msa0633310:CDS |
ACTACAATAGATGATGCTAT+TGG | 0.540839 | 4_3:-18770315 | Msa0633310:CDS |
TACGCCCAAGGTGGCCGCTG+GGG | 0.542060 | 4_3:-18768502 | Msa0633310:CDS |
AATTCAGTGGGCATTGAAGA+TGG | 0.542394 | 4_3:-18769327 | Msa0633310:CDS |
CATGTCTTGTACAATGCAGT+GGG | 0.544129 | 4_3:-18772569 | Msa0633310:CDS |
TTAGCAAGCTCCTCTATAGC+AGG | 0.544377 | 4_3:+18770234 | None:intergenic |
AAAATAAAAGCTTACGATAG+CGG | 0.546361 | 4_3:+18776773 | None:intergenic |
AATTGCAGTATTACATCTTG+AGG | 0.551614 | 4_3:-18769366 | Msa0633310:CDS |
GAGGAGGGCATACTAGTTGA+AGG | 0.557928 | 4_3:+18769115 | None:intergenic |
ACGCCCAAGGTGGCCGCTGG+GGG | 0.559762 | 4_3:-18768501 | Msa0633310:CDS |
AATTGTTGGCGTCCATCACA+TGG | 0.562392 | 4_3:-18772504 | Msa0633310:CDS |
TCTTCTGGTTCTTCTGCAGG+AGG | 0.563864 | 4_3:+18768836 | None:intergenic |
GCTGCGGGTAGAGTGTTTGT+GGG | 0.563940 | 4_3:+18776881 | None:intergenic |
GAGCATGAGCCTCCATGTGA+TGG | 0.565179 | 4_3:+18772492 | None:intergenic |
TATAGAGGAGCTTGCTAAGG+AGG | 0.565375 | 4_3:-18770229 | Msa0633310:CDS |
GAAGGCTCGGAGAATTGCTG+GGG | 0.575169 | 4_3:-18772540 | Msa0633310:CDS |
CCATGTCTTGTACAATGCAG+TGG | 0.576146 | 4_3:-18772570 | Msa0633310:CDS |
CCCCGGCTTTGTACCGACAA+TGG | 0.576842 | 4_3:-18769093 | Msa0633310:intron |
CAGTATTACATCTTGAGGAA+AGG | 0.576903 | 4_3:-18769361 | Msa0633310:CDS |
CGGAGAGATGTGAAGAGTGA+AGG | 0.577110 | 4_3:+18776918 | None:intergenic |
CCACTGCATTGTACAAGACA+TGG | 0.584393 | 4_3:+18772570 | None:intergenic |
TGATTATATCGGGTTTAGCG+AGG | 0.590772 | 4_3:+18768296 | None:intergenic |
TTCAGTATGATGTACGCCCA+AGG | 0.592571 | 4_3:-18768514 | Msa0633310:intron |
GGGGAAGCAAGAGACGCTGC+GGG | 0.594025 | 4_3:+18776866 | None:intergenic |
GGACTTGATATAAGGAGAAG+TGG | 0.600241 | 4_3:-18770261 | Msa0633310:CDS |
GAAAACGTCACAATAGTGGT+TGG | 0.602739 | 4_3:-18768228 | Msa0633310:three_prime_UTR |
TAAAGCTTATATGACTGAGA+AGG | 0.603601 | 4_3:-18773832 | Msa0633310:CDS |
ATAACTAACCTGAAAAGAAG+CGG | 0.603786 | 4_3:+18769521 | None:intergenic |
AGGCTCATGCTCTAGTGGCT+AGG | 0.604785 | 4_3:-18772481 | Msa0633310:intron |
TTAATCAATGTCACATAAGG+GGG | 0.605192 | 4_3:-18768250 | Msa0633310:three_prime_UTR |
ATAGAGGAGCTTGCTAAGGA+GGG | 0.607465 | 4_3:-18770228 | Msa0633310:CDS |
GGTATTGAGCACTTTCGCGT+AGG | 0.608335 | 4_3:-18768875 | Msa0633310:CDS |
AACCGAACTCCAAAACGCGA+TGG | 0.612279 | 4_3:-18776843 | Msa0633310:CDS |
TGAATTAGAGACGTAAGAGA+AGG | 0.615606 | 4_3:+18768422 | None:intergenic |
TTGTACAAGACATGGACAGA+TGG | 0.618290 | 4_3:+18772578 | None:intergenic |
AGGATTAGATGTTGACGTAG+TGG | 0.630891 | 4_3:-18771131 | Msa0633310:CDS |
GGTGTGAACGAGCAATTCAG+TGG | 0.634788 | 4_3:-18769340 | Msa0633310:CDS |
TTCATGAGGCTGAAGCAACA+CGG | 0.635330 | 4_3:+18768366 | None:intergenic |
TTTGGGAATGAAATTTACGC+GGG | 0.638092 | 4_3:+18776941 | None:intergenic |
TCCAAGATAGTGGCTTCATG+AGG | 0.640078 | 4_3:+18768352 | None:intergenic |
GACCTGCTTGTGAAATATGG+AGG | 0.644166 | 4_3:-18774548 | Msa0633310:CDS |
AGTCATATAAGCTTTATCAA+GGG | 0.646467 | 4_3:+18773839 | None:intergenic |
GTTTGCTGTAGGTTCCAATG+AGG | 0.646943 | 4_3:-18770037 | Msa0633310:intron |
AATAGATGATGCTATTGGTG+AGG | 0.648851 | 4_3:-18770310 | Msa0633310:CDS |
TGTCTTGTACAATGCAGTGG+GGG | 0.650060 | 4_3:-18772567 | Msa0633310:CDS |
GTGTGAACGAGCAATTCAGT+GGG | 0.650776 | 4_3:-18769339 | Msa0633310:CDS |
TGGGGAAGCAAGAGACGCTG+CGG | 0.660145 | 4_3:+18776865 | None:intergenic |
CTTGATATAAGGAGAAGTGG+TGG | 0.665095 | 4_3:-18770258 | Msa0633310:CDS |
GTACTTGAGAAGATATCACT+TGG | 0.666026 | 4_3:+18776644 | None:intergenic |
AAGGCTCGGAGAATTGCTGG+GGG | 0.666106 | 4_3:-18772539 | Msa0633310:CDS |
CGAAGGCAGAGACTTAAACC+CGG | 0.668882 | 4_3:+18773780 | None:intergenic |
TGAGTTTCAGCACTGAACAA+GGG | 0.674291 | 4_3:+18777025 | None:intergenic |
TGTGGGGAAGATGAATTCGG+CGG | 0.675849 | 4_3:+18776898 | None:intergenic |
GTTTGGGAATGAAATTTACG+CGG | 0.677188 | 4_3:+18776940 | None:intergenic |
CTGCGGGTAGAGTGTTTGTG+GGG | 0.681674 | 4_3:+18776882 | None:intergenic |
TCACTCGCAAGTGATAGACC+AGG | 0.685935 | 4_3:-18774498 | Msa0633310:intron |
ACCAATAGTAACAGCAACTG+CGG | 0.687428 | 4_3:+18773803 | None:intergenic |
ATGTCTTGTACAATGCAGTG+GGG | 0.691607 | 4_3:-18772568 | Msa0633310:CDS |
CCATTGTCGGTACAAAGCCG+GGG | 0.692599 | 4_3:+18769093 | None:intergenic |
ATAAAAGCTTACGATAGCGG+CGG | 0.697433 | 4_3:+18776776 | None:intergenic |
TTGTCGGTACAAAGCCGGGG+AGG | 0.699082 | 4_3:+18769096 | None:intergenic |
AGTATGATGTACGCCCAAGG+TGG | 0.716562 | 4_3:-18768511 | Msa0633310:CDS |
TGTTGGCGTCCATCACATGG+AGG | 0.747158 | 4_3:-18772501 | Msa0633310:CDS |
AAGTTCGAGTATTACCACGA+AGG | 0.748629 | 4_3:+18773763 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTATTTATTTATTTATTTA+TGG | - | chr4_3:18768372-18768391 | Msa0633310:three_prime_UTR | 0.0% |
!! | TATTTATTTATTTATGGTTT+AGG | - | chr4_3:18768378-18768397 | Msa0633310:three_prime_UTR | 10.0% |
!!! | TTTTTAAATAGATTTATATG+AGG | - | chr4_3:18770689-18770708 | Msa0633310:intron | 10.0% |
!! | ATACAGATATATAAATATAA+CGG | + | chr4_3:18770956-18770975 | None:intergenic | 10.0% |
!!! | GTTTTTTTACTTTTAATTAT+AGG | - | chr4_3:18771196-18771215 | Msa0633310:intron | 10.0% |
!!! | TAATAATTTATTCTTTGTTT+TGG | - | chr4_3:18776000-18776019 | Msa0633310:intron | 10.0% |
!! | TTTAAGAAATTTGTAATAAA+AGG | - | chr4_3:18776965-18776984 | Msa0633310:CDS | 10.0% |
!! | TTAAGAAATTTGTAATAAAA+GGG | - | chr4_3:18776966-18776985 | Msa0633310:CDS | 10.0% |
!!! | TTGATCTTTTTTTTTTTTTT+TGG | - | chr4_3:18777019-18777038 | Msa0633310:five_prime_UTR | 10.0% |
!!! | TTCTTGTTTTTTTTTTTTTG+CGG | - | chr4_3:18768327-18768346 | Msa0633310:three_prime_UTR | 15.0% |
!!! | TATTTTACTTATACTAACTT+AGG | - | chr4_3:18768633-18768652 | Msa0633310:intron | 15.0% |
!!! | TAATGAGTTGAATAAATATA+TGG | - | chr4_3:18768823-18768842 | Msa0633310:intron | 15.0% |
!! | ATTATTAGTATTATTACTAC+CGG | - | chr4_3:18769007-18769026 | Msa0633310:intron | 15.0% |
!! | CTATATATATTGAATGTAAA+TGG | - | chr4_3:18769605-18769624 | Msa0633310:intron | 15.0% |
!! | AATTTATGTTATAAAAGAGA+GGG | + | chr4_3:18769795-18769814 | None:intergenic | 15.0% |
!! | TACAATTAGATTAGTATATA+AGG | + | chr4_3:18770718-18770737 | None:intergenic | 15.0% |
!! | TACAGATATATAAATATAAC+GGG | + | chr4_3:18770955-18770974 | None:intergenic | 15.0% |
!! | AAAAACAATAGAGAAAAAAA+AGG | - | chr4_3:18771656-18771675 | Msa0633310:intron | 15.0% |
!!! | TCATTTTTACTACTAAATAA+TGG | + | chr4_3:18771941-18771960 | None:intergenic | 15.0% |
!! | TATAACTACTCTATTTATAA+AGG | - | chr4_3:18772114-18772133 | Msa0633310:intron | 15.0% |
!!! | AACTATTTAAAATTGTGATT+CGG | - | chr4_3:18772674-18772693 | Msa0633310:intron | 15.0% |
!!! | ATTAAATTTTCTAAAAGGTT+AGG | + | chr4_3:18773415-18773434 | None:intergenic | 15.0% |
!!! | TGTCAATTAAATTTTCTAAA+AGG | + | chr4_3:18773420-18773439 | None:intergenic | 15.0% |
!! | ATATGCATAAATTATTGAAA+TGG | - | chr4_3:18773526-18773545 | Msa0633310:intron | 15.0% |
!! | TAATGACATATATTGTTTAT+AGG | - | chr4_3:18774677-18774696 | Msa0633310:intron | 15.0% |
!! | AATGACATATATTGTTTATA+GGG | - | chr4_3:18774678-18774697 | Msa0633310:intron | 15.0% |
!! | GTTATTCATAAATAGTTTAT+AGG | - | chr4_3:18775153-18775172 | Msa0633310:intron | 15.0% |
!! | TAAATAATATAGATTGCATA+TGG | - | chr4_3:18775406-18775425 | Msa0633310:intron | 15.0% |
!! | TATTAAAGCTAATATCTTAA+TGG | - | chr4_3:18776132-18776151 | Msa0633310:intron | 15.0% |
!!! | AATAAATTTATTTTGCGAAA+AGG | - | chr4_3:18776358-18776377 | Msa0633310:intron | 15.0% |
!!! | TTACTGATTTTATTAAACAT+TGG | - | chr4_3:18776527-18776546 | Msa0633310:intron | 15.0% |
!! | GGTATTAGAAAAATTGATTA+TGG | - | chr4_3:18769496-18769515 | Msa0633310:intron | 20.0% |
!! | ATTTATGTTATAAAAGAGAG+GGG | + | chr4_3:18769794-18769813 | None:intergenic | 20.0% |
!! | GAATTTATGTTATAAAAGAG+AGG | + | chr4_3:18769796-18769815 | None:intergenic | 20.0% |
!! | ACATAAATTCCTTAAATTCA+AGG | - | chr4_3:18769806-18769825 | Msa0633310:intron | 20.0% |
!! | TAAAATATGCCTTGAATTTA+AGG | + | chr4_3:18769818-18769837 | None:intergenic | 20.0% |
!! | AACCAAATATATACAAAGAA+AGG | - | chr4_3:18770143-18770162 | Msa0633310:intron | 20.0% |
!! | TACCTTTCTTTGTATATATT+TGG | + | chr4_3:18770148-18770167 | None:intergenic | 20.0% |
!! | AAATATATACAAAGAAAGGT+AGG | - | chr4_3:18770147-18770166 | Msa0633310:intron | 20.0% |
!! | CATAGTTAGATGATAATATA+TGG | - | chr4_3:18770236-18770255 | Msa0633310:CDS | 20.0% |
!! | TATTAATTACTATAAGATGC+AGG | - | chr4_3:18770366-18770385 | Msa0633310:CDS | 20.0% |
!! | ATTAATTACTATAAGATGCA+GGG | - | chr4_3:18770367-18770386 | Msa0633310:CDS | 20.0% |
!!! | ATATAAACATAACTTGCATA+AGG | + | chr4_3:18770806-18770825 | None:intergenic | 20.0% |
!! | ACAGATATATAAATATAACG+GGG | + | chr4_3:18770954-18770973 | None:intergenic | 20.0% |
!! | AATTAAATGATATCATGTGT+TGG | + | chr4_3:18771538-18771557 | None:intergenic | 20.0% |
!! | AATAAAAAGAGAGAAAAAGA+AGG | + | chr4_3:18771632-18771651 | None:intergenic | 20.0% |
!!! | TTCTTTTTCTCTCTTTTTAT+TGG | - | chr4_3:18771631-18771650 | Msa0633310:intron | 20.0% |
!! | TTCAATTAATGAATATCATC+AGG | + | chr4_3:18771843-18771862 | None:intergenic | 20.0% |
!! | AATGATTCTTCTCAATTTAT+TGG | - | chr4_3:18771956-18771975 | Msa0633310:intron | 20.0% |
!! | AAGTAATCAATGTTAATGTT+AGG | - | chr4_3:18772169-18772188 | Msa0633310:intron | 20.0% |
!! | AGTAATCAATGTTAATGTTA+GGG | - | chr4_3:18772170-18772189 | Msa0633310:intron | 20.0% |
!! | ACAATCAGATTTGAATATAT+AGG | + | chr4_3:18772359-18772378 | None:intergenic | 20.0% |
!! | AATATTACCTGAAATAAGTA+GGG | + | chr4_3:18772833-18772852 | None:intergenic | 20.0% |
!!! | TATTTTCATTTTTTCTTCCT+TGG | - | chr4_3:18772941-18772960 | Msa0633310:intron | 20.0% |
!!! | ATTTTCATTTTTTCTTCCTT+GGG | - | chr4_3:18772942-18772961 | Msa0633310:intron | 20.0% |
!!! | TTTACTTAAATAGATTAGCT+TGG | - | chr4_3:18773619-18773638 | Msa0633310:intron | 20.0% |
!! | ATGTATAACTAAAAAAGGTT+AGG | + | chr4_3:18773677-18773696 | None:intergenic | 20.0% |
!! | AAAGCATGTATAACTAAAAA+AGG | + | chr4_3:18773682-18773701 | None:intergenic | 20.0% |
!! | TGTTCAGTATATTTATGTAT+TGG | - | chr4_3:18774634-18774653 | Msa0633310:intron | 20.0% |
!! | ATGACATATATTGTTTATAG+GGG | - | chr4_3:18774679-18774698 | Msa0633310:intron | 20.0% |
!! | AGGAAAATTATTTATAACGA+TGG | - | chr4_3:18775173-18775192 | Msa0633310:intron | 20.0% |
!! | ATATTATTTAGTTATCTTGC+AGG | + | chr4_3:18775396-18775415 | None:intergenic | 20.0% |
!! | ACTTCAGTCATAAAATTTAA+AGG | + | chr4_3:18775599-18775618 | None:intergenic | 20.0% |
!!! | TAGTTTGAAATCTAAAATTC+AGG | - | chr4_3:18775787-18775806 | Msa0633310:intron | 20.0% |
!! | GAATAAATTATTACCATTGT+CGG | + | chr4_3:18775993-18776012 | None:intergenic | 20.0% |
!!! | CATTGATTAATTAGATTTTC+TGG | + | chr4_3:18776810-18776829 | None:intergenic | 20.0% |
!! | TAATTAATCAATGTCACATA+AGG | - | chr4_3:18776817-18776836 | Msa0633310:CDS | 20.0% |
!! | AATTAATCAATGTCACATAA+GGG | - | chr4_3:18776818-18776837 | Msa0633310:CDS | 20.0% |
!!! | CACTTAAGTTATACAATTTT+GGG | + | chr4_3:18776895-18776914 | None:intergenic | 20.0% |
!!! | TCACTTAAGTTATACAATTT+TGG | + | chr4_3:18776896-18776915 | None:intergenic | 20.0% |
!! | ATAACTTAAGTGAAAAAAAG+AGG | - | chr4_3:18776903-18776922 | Msa0633310:CDS | 20.0% |
!! | TAACTTAAGTGAAAAAAAGA+GGG | - | chr4_3:18776904-18776923 | Msa0633310:CDS | 20.0% |
!!! | TGGTATTGTTATTTTTGTTT+TGG | - | chr4_3:18777039-18777058 | Msa0633310:five_prime_UTR | 20.0% |
! | AAAATAAAAGCTTACGATAG+CGG | + | chr4_3:18768300-18768319 | None:intergenic | 25.0% |
!!! | AAGTCTTATTTCACTAAATG+GGG | + | chr4_3:18768873-18768892 | None:intergenic | 25.0% |
!!! | CAAGTCTTATTTCACTAAAT+GGG | + | chr4_3:18768874-18768893 | None:intergenic | 25.0% |
!!! | TTTTCTTTTTGCTACTTTTC+TGG | - | chr4_3:18769130-18769149 | Msa0633310:CDS | 25.0% |
!!! | TTGGTTTTTATCAGACAAAA+TGG | + | chr4_3:18769210-18769229 | None:intergenic | 25.0% |
!!! | AGCTCAAATGTTTGTTTTTT+TGG | - | chr4_3:18769388-18769407 | Msa0633310:intron | 25.0% |
!! | ATTTAGCTTCTTAAAAGGAA+AGG | + | chr4_3:18769422-18769441 | None:intergenic | 25.0% |
!! | TTTGGATTTAGCTTCTTAAA+AGG | + | chr4_3:18769427-18769446 | None:intergenic | 25.0% |
! | ATCAGATAGGATGAAAATTA+AGG | - | chr4_3:18769576-18769595 | Msa0633310:CDS | 25.0% |
!! | TCTTCATAGTTTTTGAATGA+TGG | - | chr4_3:18770080-18770099 | Msa0633310:intron | 25.0% |
!! | CTTCATAGTTTTTGAATGAT+GGG | - | chr4_3:18770081-18770100 | Msa0633310:intron | 25.0% |
! | GTAATAATACATGTTGCAAA+AGG | - | chr4_3:18770277-18770296 | Msa0633310:CDS | 25.0% |
! | TTAATTACTATAAGATGCAG+GGG | - | chr4_3:18770368-18770387 | Msa0633310:CDS | 25.0% |
! | CAGATATATAAATATAACGG+GGG | + | chr4_3:18770953-18770972 | None:intergenic | 25.0% |
! | ATATGCAATACTTACAAACA+TGG | + | chr4_3:18770980-18770999 | None:intergenic | 25.0% |
! | TGTCAATAACTCAATAAAAG+GGG | + | chr4_3:18771168-18771187 | None:intergenic | 25.0% |
! | GTGTCAATAACTCAATAAAA+GGG | + | chr4_3:18771169-18771188 | None:intergenic | 25.0% |
!! | AGTCATATAAGCTTTATCAA+GGG | + | chr4_3:18771234-18771253 | None:intergenic | 25.0% |
!! | TTACTCTTTTACAGAACTTT+AGG | + | chr4_3:18771418-18771437 | None:intergenic | 25.0% |
! | AGTATGTAATAGGGAAATAT+GGG | + | chr4_3:18771497-18771516 | None:intergenic | 25.0% |
! | TAGTATGTAATAGGGAAATA+TGG | + | chr4_3:18771498-18771517 | None:intergenic | 25.0% |
! | TGGTGAATTAGTATGTAATA+GGG | + | chr4_3:18771506-18771525 | None:intergenic | 25.0% |
! | ATGGTGAATTAGTATGTAAT+AGG | + | chr4_3:18771507-18771526 | None:intergenic | 25.0% |
!! | CATTACTCTTTTTAATCCAT+GGG | + | chr4_3:18771582-18771601 | None:intergenic | 25.0% |
!! | TCATTACTCTTTTTAATCCA+TGG | + | chr4_3:18771583-18771602 | None:intergenic | 25.0% |
!! | TGATATTTGAACAACCATTT+TGG | - | chr4_3:18771600-18771619 | Msa0633310:intron | 25.0% |
! | GAATATTACCTGAAATAAGT+AGG | + | chr4_3:18772834-18772853 | None:intergenic | 25.0% |
!!! | TTGAGTTTTATCTTTAGTCA+TGG | - | chr4_3:18772872-18772891 | Msa0633310:intron | 25.0% |
! | AAAAATGAAGCTGTATTATG+TGG | + | chr4_3:18773039-18773058 | None:intergenic | 25.0% |
!! | TTTTTAAACCTGTACCATTT+TGG | - | chr4_3:18773056-18773075 | Msa0633310:intron | 25.0% |
! | AAAACTTAATCTGTCCAAAA+TGG | + | chr4_3:18773073-18773092 | None:intergenic | 25.0% |
! | TTACAGATCATCAAATTTAC+TGG | + | chr4_3:18773169-18773188 | None:intergenic | 25.0% |
!! | AAATTTGATGATCTGTAAAC+AGG | - | chr4_3:18773171-18773190 | Msa0633310:intron | 25.0% |
!! | AATTTGATGATCTGTAAACA+GGG | - | chr4_3:18773172-18773191 | Msa0633310:intron | 25.0% |
!! | AACTGAATTTTATGAAGTCT+AGG | - | chr4_3:18773350-18773369 | Msa0633310:intron | 25.0% |
!!! | CTAGGTTTGATTTGTTTATA+TGG | - | chr4_3:18773368-18773387 | Msa0633310:intron | 25.0% |
! | TTACCTCTATATAAGACTAT+AGG | - | chr4_3:18773482-18773501 | Msa0633310:intron | 25.0% |
! | ACTAAAAAAGGTTAGGATTT+AGG | + | chr4_3:18773670-18773689 | None:intergenic | 25.0% |
!!! | TCTATTTGTTTTACAGGTAA+GGG | + | chr4_3:18773773-18773792 | None:intergenic | 25.0% |
! | AAGAACCCAAAATTTGATTA+TGG | - | chr4_3:18774214-18774233 | Msa0633310:intron | 25.0% |
!! | TATAATTCTAAGAAAAGCCT+AGG | + | chr4_3:18774365-18774384 | None:intergenic | 25.0% |
! | AGTTAAGGATATGAAGAATA+TGG | + | chr4_3:18774394-18774413 | None:intergenic | 25.0% |
! | CTTACCTTTATATGTAAAGA+TGG | - | chr4_3:18774551-18774570 | Msa0633310:CDS | 25.0% |
! | AGAACCATCTTTACATATAA+AGG | + | chr4_3:18774558-18774577 | None:intergenic | 25.0% |
! | TGACATATATTGTTTATAGG+GGG | - | chr4_3:18774680-18774699 | Msa0633310:intron | 25.0% |
! | AACAATACATGTTCAATGTA+GGG | + | chr4_3:18774955-18774974 | None:intergenic | 25.0% |
! | AAACAATACATGTTCAATGT+AGG | + | chr4_3:18774956-18774975 | None:intergenic | 25.0% |
!!! | TTTATTACATTGTTTGCTGT+AGG | - | chr4_3:18775022-18775041 | Msa0633310:intron | 25.0% |
!! | ACTTTTAACGTACATCTTTT+TGG | + | chr4_3:18775123-18775142 | None:intergenic | 25.0% |
! | AAAAGGACAGATAATCTATT+GGG | + | chr4_3:18775211-18775230 | None:intergenic | 25.0% |
! | AAAAAGGACAGATAATCTAT+TGG | + | chr4_3:18775212-18775231 | None:intergenic | 25.0% |
! | CAGTCATAAAATTTAAAGGA+AGG | + | chr4_3:18775595-18775614 | None:intergenic | 25.0% |
!!! | TGTTTTGGTTTTAACAATGA+AGG | - | chr4_3:18776015-18776034 | Msa0633310:intron | 25.0% |
! | ATACTCTTCTATGAAGAATT+GGG | + | chr4_3:18776088-18776107 | None:intergenic | 25.0% |
! | TATACTCTTCTATGAAGAAT+TGG | + | chr4_3:18776089-18776108 | None:intergenic | 25.0% |
!!! | TTTTAACTGAATAGGTGTAA+TGG | - | chr4_3:18776161-18776180 | Msa0633310:intron | 25.0% |
! | TTAGAGAATCATAATAGGAA+AGG | + | chr4_3:18776327-18776346 | None:intergenic | 25.0% |
! | TGCATTTAGAGAATCATAAT+AGG | + | chr4_3:18776332-18776351 | None:intergenic | 25.0% |
! | TTATGATTCTCTAAATGCAT+TGG | - | chr4_3:18776333-18776352 | Msa0633310:intron | 25.0% |
!! | TATTTTGCGAAAAGGAAATA+TGG | - | chr4_3:18776366-18776385 | Msa0633310:intron | 25.0% |
! | TGATACTGTTTGGTTATATT+CGG | + | chr4_3:18776746-18776765 | None:intergenic | 25.0% |
! | TGATATTGCTTGATTATATC+GGG | + | chr4_3:18776787-18776806 | None:intergenic | 25.0% |
! | GTGATATTGCTTGATTATAT+CGG | + | chr4_3:18776788-18776807 | None:intergenic | 25.0% |
! | ATTAATCAATGTCACATAAG+GGG | - | chr4_3:18776819-18776838 | Msa0633310:CDS | 25.0% |
AATGGACCCTTCAAAAATAT+TGG | + | chr4_3:18768015-18768034 | None:intergenic | 30.0% | |
! | TTTGAAGGGTCCATTTTATA+CGG | - | chr4_3:18768020-18768039 | Msa0633310:three_prime_UTR | 30.0% |
!!! | GTTACTTTTTCTCTCTACAA+TGG | - | chr4_3:18768091-18768110 | Msa0633310:three_prime_UTR | 30.0% |
AATTCAGTAAATTGAAGCGT+TGG | - | chr4_3:18768505-18768524 | Msa0633310:CDS | 30.0% | |
ATACTAACTTAGGTTAGAGT+AGG | - | chr4_3:18768643-18768662 | Msa0633310:intron | 30.0% | |
!! | CCAAGTCTTATTTCACTAAA+TGG | + | chr4_3:18768875-18768894 | None:intergenic | 30.0% |
CCATTTAGTGAAATAAGACT+TGG | - | chr4_3:18768872-18768891 | Msa0633310:CDS | 30.0% | |
TGATTTATGTATCTGTGTAG+TGG | - | chr4_3:18769056-18769075 | Msa0633310:intron | 30.0% | |
!! | CTTGATTTTAGTGAACATTC+TGG | + | chr4_3:18769236-18769255 | None:intergenic | 30.0% |
CACTAAAATCAAGTTTGACA+AGG | - | chr4_3:18769243-18769262 | Msa0633310:intron | 30.0% | |
ACAATCCAAATAAAACCGAA+CGG | - | chr4_3:18769288-18769307 | Msa0633310:intron | 30.0% | |
AAGATTTGTCAGAAGACATT+TGG | + | chr4_3:18769445-18769464 | None:intergenic | 30.0% | |
! | TGTTATGAGAATTTTCTCTC+AGG | + | chr4_3:18769731-18769750 | None:intergenic | 30.0% |
TCTGATAGGACACTAATTTA+GGG | + | chr4_3:18769885-18769904 | None:intergenic | 30.0% | |
ATCTGATAGGACACTAATTT+AGG | + | chr4_3:18769886-18769905 | None:intergenic | 30.0% | |
TTGAATGTAATCACATGCAT+CGG | + | chr4_3:18769987-18770006 | None:intergenic | 30.0% | |
ACTAGTAACAAAACCAATCT+TGG | - | chr4_3:18770313-18770332 | Msa0633310:CDS | 30.0% | |
AAAATCAATTCGACCAAGAT+TGG | + | chr4_3:18770329-18770348 | None:intergenic | 30.0% | |
!! | AATCTTGGTCGAATTGATTT+TGG | - | chr4_3:18770328-18770347 | Msa0633310:CDS | 30.0% |
TAATTACTATAAGATGCAGG+GGG | - | chr4_3:18770369-18770388 | Msa0633310:CDS | 30.0% | |
TCACTTTCTGCTTAATGATT+AGG | - | chr4_3:18770417-18770436 | Msa0633310:intron | 30.0% | |
TGTGTAACTTCTTCACATTA+AGG | - | chr4_3:18770497-18770516 | Msa0633310:intron | 30.0% | |
GGATATATTAACTGCAAGAT+TGG | + | chr4_3:18770607-18770626 | None:intergenic | 30.0% | |
! | ATCAGTTTTTCTCCTTTGTT+TGG | - | chr4_3:18770867-18770886 | Msa0633310:intron | 30.0% |
!! | TCAGTTTTTCTCCTTTGTTT+GGG | - | chr4_3:18770868-18770887 | Msa0633310:intron | 30.0% |
! | TATAAATATAACGGGGGATT+GGG | + | chr4_3:18770947-18770966 | None:intergenic | 30.0% |
! | ATATAAATATAACGGGGGAT+TGG | + | chr4_3:18770948-18770967 | None:intergenic | 30.0% |
!! | TATTGACTTTCGAGTTACTT+TGG | - | chr4_3:18771088-18771107 | Msa0633310:intron | 30.0% |
!! | ATTGACTTTCGAGTTACTTT+GGG | - | chr4_3:18771089-18771108 | Msa0633310:intron | 30.0% |
ACTCAACAAACATTATCCTA+GGG | + | chr4_3:18771115-18771134 | None:intergenic | 30.0% | |
TATTACAAATCTCTTCCTAG+TGG | + | chr4_3:18771139-18771158 | None:intergenic | 30.0% | |
CTAGGAAGAGATTTGTAATA+TGG | - | chr4_3:18771139-18771158 | Msa0633310:CDS | 30.0% | |
CGTGTCAATAACTCAATAAA+AGG | + | chr4_3:18771170-18771189 | None:intergenic | 30.0% | |
TTTATTGAGTTATTGACACG+TGG | - | chr4_3:18771170-18771189 | Msa0633310:intron | 30.0% | |
! | CAGTCATATAAGCTTTATCA+AGG | + | chr4_3:18771235-18771254 | None:intergenic | 30.0% |
TAAAGCTTATATGACTGAGA+AGG | - | chr4_3:18771238-18771257 | Msa0633310:intron | 30.0% | |
TCATGTGTTGGAAATATTGA+TGG | + | chr4_3:18771526-18771545 | None:intergenic | 30.0% | |
ATATTTCATTCCATTTCCCA+TGG | - | chr4_3:18771563-18771582 | Msa0633310:intron | 30.0% | |
! | TCTTTTTAATCCATGGGAAA+TGG | + | chr4_3:18771576-18771595 | None:intergenic | 30.0% |
!!! | GCACTTTCTTGCTTATTTTA+AGG | + | chr4_3:18771771-18771790 | None:intergenic | 30.0% |
TGTAGTATAACAAGCAAACT+TGG | + | chr4_3:18771915-18771934 | None:intergenic | 30.0% | |
GCAATATTGTTTATCGACAA+AGG | - | chr4_3:18771992-18772011 | Msa0633310:intron | 30.0% | |
!! | TTGAGAAAGTCGTTTTGAAT+CGG | - | chr4_3:18772054-18772073 | Msa0633310:intron | 30.0% |
! | CATGTTAGTGTATTTTTCTC+TGG | + | chr4_3:18772292-18772311 | None:intergenic | 30.0% |
AAATACACTAACATGCAAGT+TGG | - | chr4_3:18772297-18772316 | Msa0633310:intron | 30.0% | |
AATACACTAACATGCAAGTT+GGG | - | chr4_3:18772298-18772317 | Msa0633310:intron | 30.0% | |
AATCTGATTGTTCAAACTCT+AGG | - | chr4_3:18772368-18772387 | Msa0633310:intron | 30.0% | |
CTTCAATGAGTACTTTAAGT+CGG | + | chr4_3:18772408-18772427 | None:intergenic | 30.0% | |
! | GACTTAAAGTACTCATTGAA+GGG | - | chr4_3:18772407-18772426 | Msa0633310:intron | 30.0% |
! | GGCTTTAATTTACCAATTGT+TGG | - | chr4_3:18772552-18772571 | Msa0633310:CDS | 30.0% |
!!! | TTAATGTCATTTTCTTCCTG+TGG | - | chr4_3:18772634-18772653 | Msa0633310:intron | 30.0% |
! | TGTACTTTTGTGTGTTCTTT+AGG | - | chr4_3:18772726-18772745 | Msa0633310:intron | 30.0% |
ATGAGAGACATACATATCTT+TGG | - | chr4_3:18772766-18772785 | Msa0633310:intron | 30.0% | |
! | ACATACATATCTTTGGTTTC+AGG | - | chr4_3:18772773-18772792 | Msa0633310:intron | 30.0% |
GATAAAACTCAACCAAAAAC+AGG | + | chr4_3:18772864-18772883 | None:intergenic | 30.0% | |
AGCATGACTGAAAATAAGTA+GGG | + | chr4_3:18772898-18772917 | None:intergenic | 30.0% | |
TAGCATGACTGAAAATAAGT+AGG | + | chr4_3:18772899-18772918 | None:intergenic | 30.0% | |
!! | ATTGTGTTGCTAAGTACTTT+TGG | - | chr4_3:18773132-18773151 | Msa0633310:intron | 30.0% |
! | ATTTGATGATCTGTAAACAG+GGG | - | chr4_3:18773173-18773192 | Msa0633310:intron | 30.0% |
AAAAGCCTATAACAGATAAC+AGG | + | chr4_3:18773245-18773264 | None:intergenic | 30.0% | |
AGCCTAATATCCCAATTAAA+AGG | - | chr4_3:18773301-18773320 | Msa0633310:intron | 30.0% | |
!! | GAACCTATAGTCTTATATAG+AGG | + | chr4_3:18773488-18773507 | None:intergenic | 30.0% |
ATAGGTTCGAATCTTTATGT+AGG | - | chr4_3:18773500-18773519 | Msa0633310:intron | 30.0% | |
!! | CTTAAATAGATTAGCTTGGT+AGG | - | chr4_3:18773623-18773642 | Msa0633310:intron | 30.0% |
!!! | GTCTATTTGTTTTACAGGTA+AGG | + | chr4_3:18773774-18773793 | None:intergenic | 30.0% |
AATGTTAAACACGTTATTGC+AGG | + | chr4_3:18774019-18774038 | None:intergenic | 30.0% | |
CAATAACGTGTTTAACATTG+TGG | - | chr4_3:18774020-18774039 | Msa0633310:intron | 30.0% | |
ATCCACTACAAAAGATGATT+TGG | - | chr4_3:18774141-18774160 | Msa0633310:intron | 30.0% | |
! | TCGGTCCATAATCAAATTTT+GGG | + | chr4_3:18774222-18774241 | None:intergenic | 30.0% |
! | ATCGGTCCATAATCAAATTT+TGG | + | chr4_3:18774223-18774242 | None:intergenic | 30.0% |
ATCCTTAACTTCTAATACGA+AGG | - | chr4_3:18774404-18774423 | Msa0633310:intron | 30.0% | |
TTCCTTCGTATTAGAAGTTA+AGG | + | chr4_3:18774409-18774428 | None:intergenic | 30.0% | |
AAATTATTGAAGGGGAATGA+AGG | + | chr4_3:18774448-18774467 | None:intergenic | 30.0% | |
AAGAAGGCAAATTATTGAAG+GGG | + | chr4_3:18774456-18774475 | None:intergenic | 30.0% | |
GAAGAAGGCAAATTATTGAA+GGG | + | chr4_3:18774457-18774476 | None:intergenic | 30.0% | |
! | CCAACTTTAGGAGATTATTT+GGG | + | chr4_3:18774492-18774511 | None:intergenic | 30.0% |
! | TCCAACTTTAGGAGATTATT+TGG | + | chr4_3:18774493-18774512 | None:intergenic | 30.0% |
ATATGTAAAGATGGTTCTTG+AGG | - | chr4_3:18774560-18774579 | Msa0633310:intron | 30.0% | |
! | TATTTATGTATTGGTACGCT+TGG | - | chr4_3:18774643-18774662 | Msa0633310:intron | 30.0% |
ACTACAATAGATGATGCTAT+TGG | - | chr4_3:18774755-18774774 | Msa0633310:intron | 30.0% | |
AAACAACAATCAAAAGTGGA+GGG | + | chr4_3:18774930-18774949 | None:intergenic | 30.0% | |
TTTCATTAGACCAATAGTCT+TGG | - | chr4_3:18775370-18775389 | Msa0633310:intron | 30.0% | |
! | TGCCAAAATTCCTATTTCTT+CGG | - | chr4_3:18775490-18775509 | Msa0633310:intron | 30.0% |
ATAACTAACCTGAAAAGAAG+CGG | + | chr4_3:18775552-18775571 | None:intergenic | 30.0% | |
TTAAAAGGTAAACAAGAGCA+GGG | + | chr4_3:18775631-18775650 | None:intergenic | 30.0% | |
AGCAAAAGACATGAGTTAAA+AGG | + | chr4_3:18775646-18775665 | None:intergenic | 30.0% | |
AATTGCAGTATTACATCTTG+AGG | - | chr4_3:18775704-18775723 | Msa0633310:intron | 30.0% | |
!!! | GGACTGTTTTTTAACTGAAT+AGG | - | chr4_3:18776153-18776172 | Msa0633310:intron | 30.0% |
AACACCGACAATTATATGAA+CGG | - | chr4_3:18776276-18776295 | Msa0633310:intron | 30.0% | |
ATAAAAGGATCGGTTACAAA+TGG | + | chr4_3:18776422-18776441 | None:intergenic | 30.0% | |
ATCATACTGCATAAAAGGAT+CGG | + | chr4_3:18776432-18776451 | None:intergenic | 30.0% | |
TACGCAACATAAATTTATGC+AGG | - | chr4_3:18776453-18776472 | Msa0633310:intron | 30.0% | |
TTAATCAATGTCACATAAGG+GGG | - | chr4_3:18776820-18776839 | Msa0633310:CDS | 30.0% | |
AACAAGGGTTCCGTATAAAA+TGG | + | chr4_3:18768033-18768052 | None:intergenic | 35.0% | |
AAATTTACGCGGGAAATTGT+TGG | + | chr4_3:18768122-18768141 | None:intergenic | 35.0% | |
TTTGGGAATGAAATTTACGC+GGG | + | chr4_3:18768132-18768151 | None:intergenic | 35.0% | |
GTTTGGGAATGAAATTTACG+CGG | + | chr4_3:18768133-18768152 | None:intergenic | 35.0% | |
!!! | GATGGAGATATTGTCGTTTT+GGG | - | chr4_3:18768245-18768264 | Msa0633310:three_prime_UTR | 35.0% |
GTACTTGAGAAGATATCACT+TGG | + | chr4_3:18768429-18768448 | None:intergenic | 35.0% | |
GACATGTAGATTCTGTGATA+AGG | - | chr4_3:18768710-18768729 | Msa0633310:intron | 35.0% | |
TAAGGTGAGTAGATTACATG+AGG | - | chr4_3:18768728-18768747 | Msa0633310:intron | 35.0% | |
AGGAGTAGTCAAATCACTAA+AGG | - | chr4_3:18768748-18768767 | Msa0633310:intron | 35.0% | |
TAGTCAAATCACTAAAGGCA+GGG | - | chr4_3:18768753-18768772 | Msa0633310:intron | 35.0% | |
CTTATTTCACTAAATGGGGT+TGG | + | chr4_3:18768869-18768888 | None:intergenic | 35.0% | |
!! | CTTCAGATTGAAGCTGTTTT+TGG | - | chr4_3:18768930-18768949 | Msa0633310:intron | 35.0% |
TTAGTGAACATTCTGGTGTT+TGG | + | chr4_3:18769229-18769248 | None:intergenic | 35.0% | |
TCACTAAACTTAGACACTTG+TGG | - | chr4_3:18769311-18769330 | Msa0633310:CDS | 35.0% | |
ATTAGATTGCAGCAGATATC+TGG | - | chr4_3:18769475-18769494 | Msa0633310:intron | 35.0% | |
! | CATTGGCTAAGATATCAGAT+AGG | - | chr4_3:18769563-18769582 | Msa0633310:CDS | 35.0% |
AAGAATCTTTGACTCTGGTT+TGG | + | chr4_3:18769688-18769707 | None:intergenic | 35.0% | |
GGAATAAGAATCTTTGACTC+TGG | + | chr4_3:18769693-18769712 | None:intergenic | 35.0% | |
! | ATGAGAATTTTCTCTCAGGT+AGG | + | chr4_3:18769727-18769746 | None:intergenic | 35.0% |
TGTTATAAAAGAGAGGGGTA+GGG | + | chr4_3:18769789-18769808 | None:intergenic | 35.0% | |
ATGTTATAAAAGAGAGGGGT+AGG | + | chr4_3:18769790-18769809 | None:intergenic | 35.0% | |
! | TTCAAAAGGCACAATCTGAT+AGG | + | chr4_3:18769899-18769918 | None:intergenic | 35.0% |
TCGGTGATATAGAGTTCAAA+AGG | + | chr4_3:18769913-18769932 | None:intergenic | 35.0% | |
CTCATAAGTTGTCTCAACAA+TGG | + | chr4_3:18770121-18770140 | None:intergenic | 35.0% | |
TTACGTTCTCTCTATTGCTT+TGG | + | chr4_3:18770187-18770206 | None:intergenic | 35.0% | |
!! | TGATTTTGGTACTTCTGAGA+CGG | - | chr4_3:18770342-18770361 | Msa0633310:CDS | 35.0% |
GGGACAATAGTATTATTCTG+TGG | - | chr4_3:18770389-18770408 | Msa0633310:intron | 35.0% | |
ATAACAGATGTGCTCAATCA+AGG | + | chr4_3:18770628-18770647 | None:intergenic | 35.0% | |
TTGATTGAGCACATCTGTTA+TGG | - | chr4_3:18770627-18770646 | Msa0633310:intron | 35.0% | |
TGATTGAGCACATCTGTTAT+GGG | - | chr4_3:18770628-18770647 | Msa0633310:intron | 35.0% | |
ATCTAATTGTACGAACTTCG+AGG | - | chr4_3:18770727-18770746 | Msa0633310:intron | 35.0% | |
CAGGTTCTGTTTAAAGGAAT+TGG | + | chr4_3:18771059-18771078 | None:intergenic | 35.0% | |
CAATTCCTTTAAACAGAACC+TGG | - | chr4_3:18771057-18771076 | Msa0633310:intron | 35.0% | |
AAAGTCAATAGTATACCACC+AGG | + | chr4_3:18771078-18771097 | None:intergenic | 35.0% | |
CACTCAACAAACATTATCCT+AGG | + | chr4_3:18771116-18771135 | None:intergenic | 35.0% | |
! | CTCTTTTACAGAACTTTAGG+TGG | + | chr4_3:18771415-18771434 | None:intergenic | 35.0% |
AAAGAAGGTTGTCACCAAAA+TGG | + | chr4_3:18771617-18771636 | None:intergenic | 35.0% | |
AGAAAAGCGATGAAAAGTGA+AGG | - | chr4_3:18772015-18772034 | Msa0633310:intron | 35.0% | |
CATCTAGCAGCTTCTATATT+GGG | + | chr4_3:18772244-18772263 | None:intergenic | 35.0% | |
TCATCTAGCAGCTTCTATAT+TGG | + | chr4_3:18772245-18772264 | None:intergenic | 35.0% | |
! | TAGTGTATTTTTCTCTGGCA+GGG | + | chr4_3:18772287-18772306 | None:intergenic | 35.0% |
! | TTAGTGTATTTTTCTCTGGC+AGG | + | chr4_3:18772288-18772307 | None:intergenic | 35.0% |
GAGTACTTTAAGTCGGAAAT+AGG | + | chr4_3:18772401-18772420 | None:intergenic | 35.0% | |
! | CGACTTAAAGTACTCATTGA+AGG | - | chr4_3:18772406-18772425 | Msa0633310:intron | 35.0% |
TGATCTTCTGTATGCTTTAG+AGG | - | chr4_3:18772446-18772465 | Msa0633310:intron | 35.0% | |
CATTAATTAGAGAGCCACTA+TGG | + | chr4_3:18772620-18772639 | None:intergenic | 35.0% | |
! | TATTCCTGTACACCTGTTTT+TGG | - | chr4_3:18772849-18772868 | Msa0633310:intron | 35.0% |
!!! | ATTTTTTCTTCCTTGGGTTG+TGG | - | chr4_3:18772948-18772967 | Msa0633310:intron | 35.0% |
!!! | GTTTCTAGTTTTACTTCTCG+AGG | - | chr4_3:18772978-18772997 | Msa0633310:intron | 35.0% |
! | CTCGAGGAATTTGTATTTTC+TGG | - | chr4_3:18772994-18773013 | Msa0633310:intron | 35.0% |
!! | TTTGTATTTTCTGGCGTTTG+TGG | - | chr4_3:18773003-18773022 | Msa0633310:intron | 35.0% |
!! | TTGTATTTTCTGGCGTTTGT+GGG | - | chr4_3:18773004-18773023 | Msa0633310:intron | 35.0% |
TAATCTGTCCAAAATGGTAC+AGG | + | chr4_3:18773067-18773086 | None:intergenic | 35.0% | |
CAACACAATCAAAACAGTGA+AGG | + | chr4_3:18773121-18773140 | None:intergenic | 35.0% | |
CATTCAAAAATGCCAAGTCA+TGG | + | chr4_3:18773273-18773292 | None:intergenic | 35.0% | |
!! | CGCCTTTTAATTGGGATATT+AGG | + | chr4_3:18773306-18773325 | None:intergenic | 35.0% |
CAAGCTAGACTTATCAGTTA+AGG | + | chr4_3:18773713-18773732 | None:intergenic | 35.0% | |
CTTAACTGATAAGTCTAGCT+TGG | - | chr4_3:18773711-18773730 | Msa0633310:intron | 35.0% | |
TACGTCAACATCTAATCCTT+GGG | + | chr4_3:18773938-18773957 | None:intergenic | 35.0% | |
CATAGCCAATGTTGAACAAA+CGG | + | chr4_3:18773983-18774002 | None:intergenic | 35.0% | |
! | TTGTTCAACATTGGCTATGT+AGG | - | chr4_3:18773984-18774003 | Msa0633310:intron | 35.0% |
TTGTGGCAATTATTGCACTT+AGG | - | chr4_3:18774037-18774056 | Msa0633310:intron | 35.0% | |
TGTTCTCTCAAAAGTAGTCA+TGG | + | chr4_3:18774091-18774110 | None:intergenic | 35.0% | |
!! | ATGACTACTTTTGAGAGAAC+AGG | - | chr4_3:18774090-18774109 | Msa0633310:intron | 35.0% |
! | AGCCAAATCATCTTTTGTAG+TGG | + | chr4_3:18774146-18774165 | None:intergenic | 35.0% |
! | ACTACAAAAGATGATTTGGC+TGG | - | chr4_3:18774145-18774164 | Msa0633310:intron | 35.0% |
! | GTTACCTGTGAAGTATTCAT+CGG | + | chr4_3:18774241-18774260 | None:intergenic | 35.0% |
!! | TCATGTTTGTTGGCTTTGTA+TGG | + | chr4_3:18774263-18774282 | None:intergenic | 35.0% |
AAAGCCAACAAACATGAACA+AGG | - | chr4_3:18774266-18774285 | Msa0633310:intron | 35.0% | |
CAAACCTTGTTCATGTTTGT+TGG | + | chr4_3:18774273-18774292 | None:intergenic | 35.0% | |
GGAAGAAGGCAAATTATTGA+AGG | + | chr4_3:18774458-18774477 | None:intergenic | 35.0% | |
! | CTTTAGGAGATTATTTGGGA+GGG | + | chr4_3:18774488-18774507 | None:intergenic | 35.0% |
! | ACTTTAGGAGATTATTTGGG+AGG | + | chr4_3:18774489-18774508 | None:intergenic | 35.0% |
CCCAAATAATCTCCTAAAGT+TGG | - | chr4_3:18774489-18774508 | Msa0633310:intron | 35.0% | |
AACAATGACTGTCAAATCAG+AGG | + | chr4_3:18774618-18774637 | None:intergenic | 35.0% | |
AATAGATGATGCTATTGGTG+AGG | - | chr4_3:18774760-18774779 | Msa0633310:intron | 35.0% | |
CTTATGACAAGTCAGCAAAA+TGG | - | chr4_3:18774783-18774802 | Msa0633310:intron | 35.0% | |
! | AATGGCTTGGACTTGATATA+AGG | - | chr4_3:18774801-18774820 | Msa0633310:intron | 35.0% |
AACAACAATCAAAAGTGGAG+GGG | + | chr4_3:18774929-18774948 | None:intergenic | 35.0% | |
GAAACAACAATCAAAAGTGG+AGG | + | chr4_3:18774931-18774950 | None:intergenic | 35.0% | |
GGAGAAACAACAATCAAAAG+TGG | + | chr4_3:18774934-18774953 | None:intergenic | 35.0% | |
TCTAAAAACCCAAGTAAGAC+TGG | - | chr4_3:18775088-18775107 | Msa0633310:intron | 35.0% | |
AAGCGCTTGTGATAAGAAAA+AGG | + | chr4_3:18775228-18775247 | None:intergenic | 35.0% | |
! | TGCCGAAGAAATAGGAATTT+TGG | + | chr4_3:18775495-18775514 | None:intergenic | 35.0% |
TCATTACTTGCCGAAGAAAT+AGG | + | chr4_3:18775503-18775522 | None:intergenic | 35.0% | |
! | CAGGTTAGTTATACTTCTGT+AGG | - | chr4_3:18775560-18775579 | Msa0633310:intron | 35.0% |
GTTAAAAGGTAAACAAGAGC+AGG | + | chr4_3:18775632-18775651 | None:intergenic | 35.0% | |
CAGTATTACATCTTGAGGAA+AGG | - | chr4_3:18775709-18775728 | Msa0633310:intron | 35.0% | |
ACTACCAGATGTCTTATAGA+AGG | + | chr4_3:18775771-18775790 | None:intergenic | 35.0% | |
TTGCGTCAAACCAATATGTT+CGG | - | chr4_3:18775900-18775919 | Msa0633310:intron | 35.0% | |
AATGAAGGCTAACTCTATCT+AGG | - | chr4_3:18776030-18776049 | Msa0633310:intron | 35.0% | |
AAACATACCAGAAAGTCTTC+TGG | + | chr4_3:18776252-18776271 | None:intergenic | 35.0% | |
CCTTCCGTTCATATAATTGT+CGG | + | chr4_3:18776283-18776302 | None:intergenic | 35.0% | |
CGTACATCATACTGCATAAA+AGG | + | chr4_3:18776437-18776456 | None:intergenic | 35.0% | |
! | TTTTAGTCGCTCCTTAAGAA+CGG | - | chr4_3:18776614-18776633 | Msa0633310:intron | 35.0% |
TGAATTAGAGACGTAAGAGA+AGG | + | chr4_3:18776651-18776670 | None:intergenic | 35.0% | |
! | TGAGTTTCAGCACTGAACAA+GGG | + | chr4_3:18768048-18768067 | None:intergenic | 40.0% |
! | ATGAGTTTCAGCACTGAACA+AGG | + | chr4_3:18768049-18768068 | None:intergenic | 40.0% |
GATGTGAAGAGTGAAGGTTT+GGG | + | chr4_3:18768149-18768168 | None:intergenic | 40.0% | |
AGATGTGAAGAGTGAAGGTT+TGG | + | chr4_3:18768150-18768169 | None:intergenic | 40.0% | |
GTTTGTGGGGAAGATGAATT+CGG | + | chr4_3:18768178-18768197 | None:intergenic | 40.0% | |
! | ACAATATCTCCATCGCGTTT+TGG | + | chr4_3:18768239-18768258 | None:intergenic | 40.0% |
!! | CGATGGAGATATTGTCGTTT+TGG | - | chr4_3:18768244-18768263 | Msa0633310:three_prime_UTR | 40.0% |
! | ATAAAAGCTTACGATAGCGG+CGG | + | chr4_3:18768297-18768316 | None:intergenic | 40.0% |
ATGGTTTAGGTGAGAAGTGA+CGG | - | chr4_3:18768391-18768410 | Msa0633310:exon | 40.0% | |
! | ACACCTTTGATCAGAAGTGT+TGG | - | chr4_3:18768548-18768567 | Msa0633310:intron | 40.0% |
GTACCAACACTTCTGATCAA+AGG | + | chr4_3:18768554-18768573 | None:intergenic | 40.0% | |
!! | GCATCGACACTTTTGATCAA+AGG | + | chr4_3:18768598-18768617 | None:intergenic | 40.0% |
GAGTAGGAAACTGAGAAAGT+AGG | - | chr4_3:18768659-18768678 | Msa0633310:intron | 40.0% | |
GAAACTGAGAAAGTAGGCTT+AGG | - | chr4_3:18768665-18768684 | Msa0633310:intron | 40.0% | |
GTAGTCAAATCACTAAAGGC+AGG | - | chr4_3:18768752-18768771 | Msa0633310:intron | 40.0% | |
AGTCAAATCACTAAAGGCAG+GGG | - | chr4_3:18768754-18768773 | Msa0633310:intron | 40.0% | |
!! | GACTTGGTTGTTGTTTGAGT+AGG | - | chr4_3:18768888-18768907 | Msa0633310:CDS | 40.0% |
! | AGCTTCAATCTGAAGTGTCA+TGG | + | chr4_3:18768925-18768944 | None:intergenic | 40.0% |
!!! | TTGAAGCTGTTTTTGGTGTC+CGG | - | chr4_3:18768937-18768956 | Msa0633310:intron | 40.0% |
CATATAACACCAACACATGC+CGG | + | chr4_3:18768959-18768978 | None:intergenic | 40.0% | |
CAACACTGACACATAAACAC+CGG | + | chr4_3:18769029-18769048 | None:intergenic | 40.0% | |
!!! | AGTGACCGTTCGGTTTTATT+TGG | + | chr4_3:18769296-18769315 | None:intergenic | 40.0% |
GTCTAAGTTTAGTGACCGTT+CGG | + | chr4_3:18769306-18769325 | None:intergenic | 40.0% | |
ATATCTTAGCCAATGCAGCA+TGG | + | chr4_3:18769558-18769577 | None:intergenic | 40.0% | |
TGAGCTTAAGAGCTCTACAA+TGG | - | chr4_3:18769629-18769648 | Msa0633310:intron | 40.0% | |
GTTATAAAAGAGAGGGGTAG+GGG | + | chr4_3:18769788-18769807 | None:intergenic | 40.0% | |
CAATAACCAAGCTGAATGGA+GGG | + | chr4_3:18769854-18769873 | None:intergenic | 40.0% | |
CTCCATTCAGCTTGGTTATT+GGG | - | chr4_3:18769853-18769872 | Msa0633310:intron | 40.0% | |
ATCCCAATAACCAAGCTGAA+TGG | + | chr4_3:18769858-18769877 | None:intergenic | 40.0% | |
TCAGCTTGGTTATTGGGATT+AGG | - | chr4_3:18769859-18769878 | Msa0633310:intron | 40.0% | |
! | ACATCTTCGATCAGAAGTGT+CGG | + | chr4_3:18769932-18769951 | None:intergenic | 40.0% |
ATGAAGAACTTGCACATGCA+TGG | + | chr4_3:18770067-18770086 | None:intergenic | 40.0% | |
! | CACGATGAGAGTATGAGATA+TGG | - | chr4_3:18770210-18770229 | Msa0633310:CDS | 40.0% |
!! | GCTTAATGATTAGGCACTGA+TGG | - | chr4_3:18770426-18770445 | Msa0633310:intron | 40.0% |
!!! | TGAGCTTCTTCTGCCATTTT+TGG | + | chr4_3:18770555-18770574 | None:intergenic | 40.0% |
!! | CAAGATTGGAGTTTTGTACC+TGG | + | chr4_3:18770593-18770612 | None:intergenic | 40.0% |
! | GAACTTCGAGGCTTTATATG+AGG | - | chr4_3:18770739-18770758 | Msa0633310:intron | 40.0% |
TGCGTGACAAAACATGCATA+AGG | + | chr4_3:18770768-18770787 | None:intergenic | 40.0% | |
CTGGGTTAAAACCCAAACAA+AGG | + | chr4_3:18770882-18770901 | None:intergenic | 40.0% | |
!! | CTTTGTTTGGGTTTTAACCC+AGG | - | chr4_3:18770880-18770899 | Msa0633310:intron | 40.0% |
TTCCTTTAAACAGAACCTGG+TGG | - | chr4_3:18771060-18771079 | Msa0633310:intron | 40.0% | |
TACCACCAGGTTCTGTTTAA+AGG | + | chr4_3:18771065-18771084 | None:intergenic | 40.0% | |
! | AATGTTTGTTGAGTGCCACT+AGG | - | chr4_3:18771121-18771140 | Msa0633310:CDS | 40.0% |
ACCAATAGTAACAGCAACTG+CGG | + | chr4_3:18771270-18771289 | None:intergenic | 40.0% | |
! | AGTTGCTGTTACTATTGGTC+CGG | - | chr4_3:18771271-18771290 | Msa0633310:intron | 40.0% |
AAGTTCGAGTATTACCACGA+AGG | + | chr4_3:18771310-18771329 | None:intergenic | 40.0% | |
TAACGTTCAACTGGAACGAT+TGG | + | chr4_3:18771471-18771490 | None:intergenic | 40.0% | |
TATGGGAGTTAACGTTCAAC+TGG | + | chr4_3:18771480-18771499 | None:intergenic | 40.0% | |
!! | AAGAAAGTGCCTGTTAGAGT+TGG | - | chr4_3:18771781-18771800 | Msa0633310:intron | 40.0% |
!! | AGAAAGTGCCTGTTAGAGTT+GGG | - | chr4_3:18771782-18771801 | Msa0633310:intron | 40.0% |
GATTGTTCAAACTCTAGGCA+TGG | - | chr4_3:18772373-18772392 | Msa0633310:intron | 40.0% | |
TTGTACAAGACATGGACAGA+TGG | + | chr4_3:18772495-18772514 | None:intergenic | 40.0% | |
CATGTCTTGTACAATGCAGT+GGG | - | chr4_3:18772501-18772520 | Msa0633310:CDS | 40.0% | |
ATGTCTTGTACAATGCAGTG+GGG | - | chr4_3:18772502-18772521 | Msa0633310:CDS | 40.0% | |
AAATAAGTAGGGCCATGAAC+GGG | + | chr4_3:18772822-18772841 | None:intergenic | 40.0% | |
GAAATAAGTAGGGCCATGAA+CGG | + | chr4_3:18772823-18772842 | None:intergenic | 40.0% | |
TTCATGGCCCTACTTATTTC+AGG | - | chr4_3:18772823-18772842 | Msa0633310:intron | 40.0% | |
TCAACCAAAAACAGGTGTAC+AGG | + | chr4_3:18772856-18772875 | None:intergenic | 40.0% | |
AACAACAATTCCACAACCCA+AGG | + | chr4_3:18772961-18772980 | None:intergenic | 40.0% | |
AAAACAGTGAAGGATCAAGC+AGG | + | chr4_3:18773111-18773130 | None:intergenic | 40.0% | |
AAACAGGGGTGAGAATAGAT+TGG | - | chr4_3:18773187-18773206 | Msa0633310:intron | 40.0% | |
AACAGGGGTGAGAATAGATT+GGG | - | chr4_3:18773188-18773207 | Msa0633310:intron | 40.0% | |
! | ACTTGGCATTTTTGAATGCC+AGG | - | chr4_3:18773275-18773294 | Msa0633310:intron | 40.0% |
! | ATTAGCTTGGTAGGCCTAAT+AGG | - | chr4_3:18773632-18773651 | Msa0633310:intron | 40.0% |
GCTTGGACTTGATAAAGGTT+AGG | - | chr4_3:18773733-18773752 | Msa0633310:intron | 40.0% | |
!!! | TGCGCGTCTATTTGTTTTAC+AGG | + | chr4_3:18773779-18773798 | None:intergenic | 40.0% |
CTTTCATGGTCTATGCAAGT+GGG | + | chr4_3:18773893-18773912 | None:intergenic | 40.0% | |
TCTTTCATGGTCTATGCAAG+TGG | + | chr4_3:18773894-18773913 | None:intergenic | 40.0% | |
CTTGCATAGACCATGAAAGA+TGG | - | chr4_3:18773894-18773913 | Msa0633310:intron | 40.0% | |
CATAGACCATGAAAGATGGT+TGG | - | chr4_3:18773898-18773917 | Msa0633310:intron | 40.0% | |
! | ACCATGAAAGATGGTTGGTT+GGG | - | chr4_3:18773903-18773922 | Msa0633310:intron | 40.0% |
CTACGTCAACATCTAATCCT+TGG | + | chr4_3:18773939-18773958 | None:intergenic | 40.0% | |
AGGATTAGATGTTGACGTAG+TGG | - | chr4_3:18773939-18773958 | Msa0633310:intron | 40.0% | |
! | TTCAACATTGGCTATGTAGG+AGG | - | chr4_3:18773987-18774006 | Msa0633310:intron | 40.0% |
ACAGAAAGGTTTACCATGCA+GGG | - | chr4_3:18774173-18774192 | Msa0633310:intron | 40.0% | |
TTACCATGCAGGGTTCAAAT+TGG | - | chr4_3:18774183-18774202 | Msa0633310:intron | 40.0% | |
TACCATGCAGGGTTCAAATT+GGG | - | chr4_3:18774184-18774203 | Msa0633310:intron | 40.0% | |
ACACAAGAAAGAACAGACCT+AGG | - | chr4_3:18774345-18774364 | Msa0633310:intron | 40.0% | |
GTGAAACTGTCTCCAACTTT+AGG | + | chr4_3:18774504-18774523 | None:intergenic | 40.0% | |
TCATTCTTGCACGTGATCTT+GGG | - | chr4_3:18774714-18774733 | Msa0633310:intron | 40.0% | |
CTTGGGCAATACATACAACT+TGG | - | chr4_3:18774731-18774750 | Msa0633310:intron | 40.0% | |
GGACTTGATATAAGGAGAAG+TGG | - | chr4_3:18774809-18774828 | Msa0633310:intron | 40.0% | |
CTTGATATAAGGAGAAGTGG+TGG | - | chr4_3:18774812-18774831 | Msa0633310:intron | 40.0% | |
GATTGCAACTTCTCTTATGC+TGG | - | chr4_3:18775065-18775084 | Msa0633310:intron | 40.0% | |
CTCAATTGCCAGTCTTACTT+GGG | + | chr4_3:18775099-18775118 | None:intergenic | 40.0% | |
ACTCAATTGCCAGTCTTACT+TGG | + | chr4_3:18775100-18775119 | None:intergenic | 40.0% | |
!! | TGATATTGCCGCTTCTTTTC+AGG | - | chr4_3:18775541-18775560 | Msa0633310:intron | 40.0% |
!! | AATTCAGTGGGCATTGAAGA+TGG | - | chr4_3:18775743-18775762 | Msa0633310:intron | 40.0% |
TGCGTCAAACCAATATGTTC+GGG | - | chr4_3:18775901-18775920 | Msa0633310:intron | 40.0% | |
GATACGGTTGTGAAGAAGAA+TGG | - | chr4_3:18775932-18775951 | Msa0633310:intron | 40.0% | |
GAATAGGTGTAATGGTTGCT+TGG | - | chr4_3:18776169-18776188 | Msa0633310:intron | 40.0% | |
AGAAGAACCAGAAGACTTTC+TGG | - | chr4_3:18776242-18776261 | Msa0633310:intron | 40.0% | |
CCGACAATTATATGAACGGA+AGG | - | chr4_3:18776280-18776299 | Msa0633310:intron | 40.0% | |
! | ATGAATTCGTGCCGTTCTTA+AGG | + | chr4_3:18776628-18776647 | None:intergenic | 40.0% |
ATATTCGGCTTCCAAGATAG+TGG | + | chr4_3:18776731-18776750 | None:intergenic | 40.0% | |
!! | GGTTTTCTGGTGATACTGTT+TGG | + | chr4_3:18776756-18776775 | None:intergenic | 40.0% |
TGATTATATCGGGTTTAGCG+AGG | + | chr4_3:18776777-18776796 | None:intergenic | 40.0% | |
GAAAACGTCACAATAGTGGT+TGG | - | chr4_3:18776842-18776861 | Msa0633310:CDS | 40.0% | |
ACTGAGAAAGTAGGCTTAGG+TGG | - | chr4_3:18768668-18768687 | Msa0633310:intron | 45.0% | |
GAAAGTAGGCTTAGGTGGTT+TGG | - | chr4_3:18768673-18768692 | Msa0633310:intron | 45.0% | |
!! | ACTAAATGGGGTTGGCTACA+TGG | + | chr4_3:18768861-18768880 | None:intergenic | 45.0% |
!! | CGGCATGTGTTGGTGTTATA+TGG | - | chr4_3:18768957-18768976 | Msa0633310:intron | 45.0% |
! | GTGCATTTTCCATGCTGCAT+TGG | - | chr4_3:18769546-18769565 | Msa0633310:CDS | 45.0% |
GCTTAAGAGCTCTACAATGG+TGG | - | chr4_3:18769632-18769651 | Msa0633310:intron | 45.0% | |
CTTATTCCCTCCATTCAGCT+TGG | - | chr4_3:18769845-18769864 | Msa0633310:intron | 45.0% | |
CCAATAACCAAGCTGAATGG+AGG | + | chr4_3:18769855-18769874 | None:intergenic | 45.0% | |
CCTCCATTCAGCTTGGTTAT+TGG | - | chr4_3:18769852-18769871 | Msa0633310:intron | 45.0% | |
GCAGACCTGCTTGTGAAATA+TGG | - | chr4_3:18770519-18770538 | Msa0633310:intron | 45.0% | |
GACCTGCTTGTGAAATATGG+AGG | - | chr4_3:18770522-18770541 | Msa0633310:intron | 45.0% | |
AGCACATCTGTTATGGGTCA+GGG | - | chr4_3:18770634-18770653 | Msa0633310:intron | 45.0% | |
! | CTGGTTTGAGCTAAGGGATA+AGG | + | chr4_3:18770916-18770935 | None:intergenic | 45.0% |
!! | GCTCAACTGGTTTGAGCTAA+GGG | + | chr4_3:18770922-18770941 | None:intergenic | 45.0% |
!! | AGCTCAACTGGTTTGAGCTA+AGG | + | chr4_3:18770923-18770942 | None:intergenic | 45.0% |
! | ACCGCAGTTGCTGTTACTAT+TGG | - | chr4_3:18771266-18771285 | Msa0633310:intron | 45.0% |
! | GTTGCTGTTACTATTGGTCC+GGG | - | chr4_3:18771272-18771291 | Msa0633310:intron | 45.0% |
ATGAGCTTCCCAACTCTAAC+AGG | + | chr4_3:18771793-18771812 | None:intergenic | 45.0% | |
CCACTGCATTGTACAAGACA+TGG | + | chr4_3:18772503-18772522 | None:intergenic | 45.0% | |
CCATGTCTTGTACAATGCAG+TGG | - | chr4_3:18772500-18772519 | Msa0633310:CDS | 45.0% | |
TGTCTTGTACAATGCAGTGG+GGG | - | chr4_3:18772503-18772522 | Msa0633310:CDS | 45.0% | |
!! | ATGTGATGGACGCCAACAAT+TGG | + | chr4_3:18772567-18772586 | None:intergenic | 45.0% |
AATTGTTGGCGTCCATCACA+TGG | - | chr4_3:18772566-18772585 | Msa0633310:CDS | 45.0% | |
! | TTTTCTTCCTGTGGATGCAG+AGG | - | chr4_3:18772643-18772662 | Msa0633310:intron | 45.0% |
AGATTTGCAGTTCCCGTTCA+TGG | - | chr4_3:18772807-18772826 | Msa0633310:intron | 45.0% | |
!!! | GGGCCATGAGTATTTTTGGT+CGG | + | chr4_3:18773214-18773233 | None:intergenic | 45.0% |
! | GCTTGGGCCATGAGTATTTT+TGG | + | chr4_3:18773218-18773237 | None:intergenic | 45.0% |
CCTATAACAGATAACAGGCC+AGG | + | chr4_3:18773240-18773259 | None:intergenic | 45.0% | |
CCTGGCCTGTTATCTGTTAT+AGG | - | chr4_3:18773237-18773256 | Msa0633310:intron | 45.0% | |
! | GGCTTTTTGTAGCCATGACT+TGG | - | chr4_3:18773258-18773277 | Msa0633310:intron | 45.0% |
TTGGGATATTAGGCTAGACC+TGG | + | chr4_3:18773296-18773315 | None:intergenic | 45.0% | |
!! | ATCCCAATTAAAAGGCGCTG+TGG | - | chr4_3:18773309-18773328 | Msa0633310:intron | 45.0% |
!! | TCCCAATTAAAAGGCGCTGT+GGG | - | chr4_3:18773310-18773329 | Msa0633310:intron | 45.0% |
!! | ACCCACAGCGCCTTTTAATT+GGG | + | chr4_3:18773314-18773333 | None:intergenic | 45.0% |
GGCCTAATAGGCTCTTTGAA+TGG | - | chr4_3:18773644-18773663 | Msa0633310:intron | 45.0% | |
GGCCATTCAAAGAGCCTATT+AGG | + | chr4_3:18773649-18773668 | None:intergenic | 45.0% | |
! | CTGATAAGTCTAGCTTGGCT+TGG | - | chr4_3:18773716-18773735 | Msa0633310:intron | 45.0% |
!! | GCTTGGCTTGGACTTGATAA+AGG | - | chr4_3:18773728-18773747 | Msa0633310:intron | 45.0% |
AGGTAAGGGTGAGAAGTCTA+TGG | + | chr4_3:18773759-18773778 | None:intergenic | 45.0% | |
ATTGTGAGATACAGCTGGCA+AGG | - | chr4_3:18773798-18773817 | Msa0633310:CDS | 45.0% | |
TTGTGAGATACAGCTGGCAA+GGG | - | chr4_3:18773799-18773818 | Msa0633310:CDS | 45.0% | |
GACCATGAAAGATGGTTGGT+TGG | - | chr4_3:18773902-18773921 | Msa0633310:intron | 45.0% | |
TGGAGCCGTTTGTTCAACAT+TGG | - | chr4_3:18773975-18773994 | Msa0633310:intron | 45.0% | |
!! | ACTTTTGAGAGAACAGGCAG+AGG | - | chr4_3:18774096-18774115 | Msa0633310:intron | 45.0% |
TTTGGCTGGTAGACACAGAA+AGG | - | chr4_3:18774159-18774178 | Msa0633310:intron | 45.0% | |
CACAGAAAGGTTTACCATGC+AGG | - | chr4_3:18774172-18774191 | Msa0633310:intron | 45.0% | |
ACCATGCAGGGTTCAAATTG+GGG | - | chr4_3:18774185-18774204 | Msa0633310:intron | 45.0% | |
TGGACCGATGAATACTTCAC+AGG | - | chr4_3:18774234-18774253 | Msa0633310:intron | 45.0% | |
ATTATTTGGGAGGGCAACAC+AGG | + | chr4_3:18774479-18774498 | None:intergenic | 45.0% | |
ATCAGAGGTTTGCAACAGAC+TGG | + | chr4_3:18774603-18774622 | None:intergenic | 45.0% | |
CTCATTCTTGCACGTGATCT+TGG | - | chr4_3:18774713-18774732 | Msa0633310:intron | 45.0% | |
GACAAGTCAGCAAAATGGCT+TGG | - | chr4_3:18774788-18774807 | Msa0633310:intron | 45.0% | |
TTAGCAAGCTCCTCTATAGC+AGG | + | chr4_3:18774839-18774858 | None:intergenic | 45.0% | |
!! | TGCTATAGAGGAGCTTGCTA+AGG | - | chr4_3:18774838-18774857 | Msa0633310:intron | 45.0% |
!! | TATAGAGGAGCTTGCTAAGG+AGG | - | chr4_3:18774841-18774860 | Msa0633310:intron | 45.0% |
!! | ATAGAGGAGCTTGCTAAGGA+GGG | - | chr4_3:18774842-18774861 | Msa0633310:intron | 45.0% |
ACAATCAAAAGTGGAGGGGA+GGG | + | chr4_3:18774925-18774944 | None:intergenic | 45.0% | |
AACAATCAAAAGTGGAGGGG+AGG | + | chr4_3:18774926-18774945 | None:intergenic | 45.0% | |
! | CACCAATAGAAGCACAACAG+CGG | + | chr4_3:18774995-18775014 | None:intergenic | 45.0% |
!! | GTTTGCTGTAGGTTCCAATG+AGG | - | chr4_3:18775033-18775052 | Msa0633310:intron | 45.0% |
CAATCCTTATGCTGCCTCAT+TGG | + | chr4_3:18775050-18775069 | None:intergenic | 45.0% | |
ATCTTGCAGGCCAAGACTAT+TGG | + | chr4_3:18775383-18775402 | None:intergenic | 45.0% | |
GTGTGAACGAGCAATTCAGT+GGG | - | chr4_3:18775731-18775750 | Msa0633310:intron | 45.0% | |
GGAGCCTTCTATAAGACATC+TGG | - | chr4_3:18775764-18775783 | Msa0633310:intron | 45.0% | |
GCAACAGACAAGACGTAGAA+TGG | + | chr4_3:18775862-18775881 | None:intergenic | 45.0% | |
TTCTACGTCTTGTCTGTTGC+AGG | - | chr4_3:18775862-18775881 | Msa0633310:intron | 45.0% | |
TACCATTGTCGGTACAAAGC+CGG | + | chr4_3:18775982-18776001 | None:intergenic | 45.0% | |
!! | AAGTCTTCTGGTTCTTCTGC+AGG | + | chr4_3:18776240-18776259 | None:intergenic | 45.0% |
TTCAGTATGATGTACGCCCA+AGG | - | chr4_3:18776556-18776575 | Msa0633310:intron | 45.0% | |
TTCATGAGGCTGAAGCAACA+CGG | + | chr4_3:18776707-18776726 | None:intergenic | 45.0% | |
! | TCCAAGATAGTGGCTTCATG+AGG | + | chr4_3:18776721-18776740 | None:intergenic | 45.0% |
!! | AAAAAAAAATAATTAGATTT+GGG | + | chr4_3:18770674-18770693 | None:intergenic | 5.0% |
!! | TAAAAAAAAATAATTAGATT+TGG | + | chr4_3:18770675-18770694 | None:intergenic | 5.0% |
CGGAGAGATGTGAAGAGTGA+AGG | + | chr4_3:18768155-18768174 | None:intergenic | 50.0% | |
TGTGGGGAAGATGAATTCGG+CGG | + | chr4_3:18768175-18768194 | None:intergenic | 50.0% | |
!!! | TCGCGTTTTGGAGTTCGGTT+GGG | + | chr4_3:18768227-18768246 | None:intergenic | 50.0% |
!!! | ATCGCGTTTTGGAGTTCGGT+TGG | + | chr4_3:18768228-18768247 | None:intergenic | 50.0% |
AACCGAACTCCAAAACGCGA+TGG | - | chr4_3:18768227-18768246 | Msa0633310:three_prime_UTR | 50.0% | |
!!! | CTCCATCGCGTTTTGGAGTT+CGG | + | chr4_3:18768232-18768251 | None:intergenic | 50.0% |
!! | TTGAAGCGTTGGACACGTGT+TGG | - | chr4_3:18768516-18768535 | Msa0633310:intron | 50.0% |
TTGGTACCTGTGTCACACAC+TGG | - | chr4_3:18768567-18768586 | Msa0633310:intron | 50.0% | |
ACTAAAGGCAGGGGAAGACT+TGG | - | chr4_3:18768763-18768782 | Msa0633310:intron | 50.0% | |
!!! | TTTTGGTGTCCGGCATGTGT+TGG | - | chr4_3:18768947-18768966 | Msa0633310:intron | 50.0% |
CACTGACATGTGTCGTACAC+AGG | + | chr4_3:18769957-18769976 | None:intergenic | 50.0% | |
CGACACTGACACATTGACAC+TGG | + | chr4_3:18770034-18770053 | None:intergenic | 50.0% | |
CAATGTGTCAGTGTCGTGTC+TGG | - | chr4_3:18770038-18770057 | Msa0633310:intron | 50.0% | |
CGCCTCCATATTTCACAAGC+AGG | + | chr4_3:18770527-18770546 | None:intergenic | 50.0% | |
!! | TGGAGGCGTTGCTCCAAAAA+TGG | - | chr4_3:18770539-18770558 | Msa0633310:intron | 50.0% |
TCACTCGCAAGTGATAGACC+AGG | - | chr4_3:18770572-18770591 | Msa0633310:intron | 50.0% | |
GAGCACATCTGTTATGGGTC+AGG | - | chr4_3:18770633-18770652 | Msa0633310:intron | 50.0% | |
!! | TGGGTTTTAACCCAGGACCT+CGG | - | chr4_3:18770887-18770906 | Msa0633310:intron | 50.0% |
! | TTCGAGTTACTTTGGGCCCT+AGG | - | chr4_3:18771096-18771115 | Msa0633310:intron | 50.0% |
CGAAGGCAGAGACTTAAACC+CGG | + | chr4_3:18771293-18771312 | None:intergenic | 50.0% | |
GGTTTAAGTCTCTGCCTTCG+TGG | - | chr4_3:18771293-18771312 | Msa0633310:intron | 50.0% | |
AGAAGGCTCGGAGAATTGCT+GGG | - | chr4_3:18772529-18772548 | Msa0633310:CDS | 50.0% | |
GTGGCTAGGTAAAGCCATAG+TGG | - | chr4_3:18772603-18772622 | Msa0633310:CDS | 50.0% | |
GGGCCGACCAAAAATACTCA+TGG | - | chr4_3:18773208-18773227 | Msa0633310:intron | 50.0% | |
AAATACTCATGGCCCAAGCC+TGG | - | chr4_3:18773219-18773238 | Msa0633310:intron | 50.0% | |
ACAGATAACAGGCCAGGCTT+GGG | + | chr4_3:18773234-18773253 | None:intergenic | 50.0% | |
AACAGATAACAGGCCAGGCT+TGG | + | chr4_3:18773235-18773254 | None:intergenic | 50.0% | |
! | GACCCACAGCGCCTTTTAAT+TGG | + | chr4_3:18773315-18773334 | None:intergenic | 50.0% |
TTCCCTGAGCAGTAGAACCA+AGG | - | chr4_3:18773852-18773871 | Msa0633310:CDS | 50.0% | |
!! | TGCCTTGGTTCTACTGCTCA+GGG | + | chr4_3:18773857-18773876 | None:intergenic | 50.0% |
!! | ATGCCTTGGTTCTACTGCTC+AGG | + | chr4_3:18773858-18773877 | None:intergenic | 50.0% |
TGGTCTATGCAAGTGGGATG+AGG | + | chr4_3:18773887-18773906 | None:intergenic | 50.0% | |
GCCCAACCAACCATCTTTCA+TGG | + | chr4_3:18773907-18773926 | None:intergenic | 50.0% | |
! | AAAGATGGTTGGTTGGGCCA+GGG | - | chr4_3:18773909-18773928 | Msa0633310:intron | 50.0% |
!! | GACGTAGTGGACTCAATTGC+AGG | - | chr4_3:18773952-18773971 | Msa0633310:intron | 50.0% |
!! | GTAGTGGACTCAATTGCAGG+TGG | - | chr4_3:18773955-18773974 | Msa0633310:intron | 50.0% |
AGGACGAGATCTGCCTTTCT+TGG | - | chr4_3:18774057-18774076 | Msa0633310:intron | 50.0% | |
GGACGAGATCTGCCTTTCTT+GGG | - | chr4_3:18774058-18774077 | Msa0633310:intron | 50.0% | |
GACGAGATCTGCCTTTCTTG+GGG | - | chr4_3:18774059-18774078 | Msa0633310:intron | 50.0% | |
ACGAGATCTGCCTTTCTTGG+GGG | - | chr4_3:18774060-18774079 | Msa0633310:intron | 50.0% | |
AGTGGATGTGTCTCTTGCTC+TGG | + | chr4_3:18774128-18774147 | None:intergenic | 50.0% | |
TCCCCAATTTGAACCCTGCA+TGG | + | chr4_3:18774189-18774208 | None:intergenic | 50.0% | |
CAGGGTTCAAATTGGGGAAG+TGG | - | chr4_3:18774191-18774210 | Msa0633310:intron | 50.0% | |
TGGTACGCTTGGCTATCTTG+AGG | - | chr4_3:18774654-18774673 | Msa0633310:intron | 50.0% | |
AAGTGGTGGTCCTGCTATAG+AGG | - | chr4_3:18774826-18774845 | Msa0633310:intron | 50.0% | |
AATCAAAAGTGGAGGGGAGG+GGG | + | chr4_3:18774923-18774942 | None:intergenic | 50.0% | |
CAATCAAAAGTGGAGGGGAG+GGG | + | chr4_3:18774924-18774943 | None:intergenic | 50.0% | |
GACCGCTGTTGTGCTTCTAT+TGG | - | chr4_3:18774990-18775009 | Msa0633310:intron | 50.0% | |
GGTTCCAATGAGGCAGCATA+AGG | - | chr4_3:18775043-18775062 | Msa0633310:intron | 50.0% | |
GGTGTGAACGAGCAATTCAG+TGG | - | chr4_3:18775730-18775749 | Msa0633310:intron | 50.0% | |
TGTCTGTTGCAGGTTGTCTC+TGG | - | chr4_3:18775872-18775891 | Msa0633310:intron | 50.0% | |
CAAGCTGAGCCCGAACATAT+TGG | + | chr4_3:18775913-18775932 | None:intergenic | 50.0% | |
TGTTCGGGCTCAGCTTGATA+CGG | - | chr4_3:18775916-18775935 | Msa0633310:intron | 50.0% | |
! | GAGGAGGGCATACTAGTTGA+AGG | + | chr4_3:18775958-18775977 | None:intergenic | 50.0% |
ACCATTGTCGGTACAAAGCC+GGG | + | chr4_3:18775981-18776000 | None:intergenic | 50.0% | |
GGTGTAATGGTTGCTTGGAC+TGG | - | chr4_3:18776174-18776193 | Msa0633310:intron | 50.0% | |
! | GGTATTGAGCACTTTCGCGT+AGG | - | chr4_3:18776195-18776214 | Msa0633310:intron | 50.0% |
!! | TCTTCTGGTTCTTCTGCAGG+AGG | + | chr4_3:18776237-18776256 | None:intergenic | 50.0% |
AGTATGATGTACGCCCAAGG+TGG | - | chr4_3:18776559-18776578 | Msa0633310:intron | 50.0% | |
TCAGCATATTCTTCCCCCAG+CGG | + | chr4_3:18776585-18776604 | None:intergenic | 50.0% | |
CTGGGGGAAGAATATGCTGA+AGG | - | chr4_3:18776585-18776604 | Msa0633310:intron | 50.0% | |
GCCTCATGAAGCCACTATCT+TGG | - | chr4_3:18776717-18776736 | Msa0633310:intron | 50.0% | |
! | TCGGGTTTAGCGAGGTTTTC+TGG | + | chr4_3:18776769-18776788 | None:intergenic | 50.0% |
GGGGGAAAACGTCACAATAG+TGG | - | chr4_3:18776838-18776857 | Msa0633310:CDS | 50.0% | |
! | CTGCGGGTAGAGTGTTTGTG+GGG | + | chr4_3:18768191-18768210 | None:intergenic | 55.0% |
! | GCTGCGGGTAGAGTGTTTGT+GGG | + | chr4_3:18768192-18768211 | None:intergenic | 55.0% |
!!! | CGCGTTTTGGAGTTCGGTTG+GGG | + | chr4_3:18768226-18768245 | None:intergenic | 55.0% |
GTGTGTCCAGTGTGTGACAC+AGG | + | chr4_3:18768576-18768595 | None:intergenic | 55.0% | |
CTCAGGTAGGAGCTTTGCTC+TGG | + | chr4_3:18769714-18769733 | None:intergenic | 55.0% | |
AAAAGAGAGGGGTAGGGGCA+TGG | + | chr4_3:18769783-18769802 | None:intergenic | 55.0% | |
GATAAGGAGTCCGAGGTCCT+GGG | + | chr4_3:18770900-18770919 | None:intergenic | 55.0% | |
GCTAAGGGATAAGGAGTCCG+AGG | + | chr4_3:18770907-18770926 | None:intergenic | 55.0% | |
CAGAAGGCTCGGAGAATTGC+TGG | - | chr4_3:18772528-18772547 | Msa0633310:CDS | 55.0% | |
GAAGGCTCGGAGAATTGCTG+GGG | - | chr4_3:18772530-18772549 | Msa0633310:CDS | 55.0% | |
AAGGCTCGGAGAATTGCTGG+GGG | - | chr4_3:18772531-18772550 | Msa0633310:CDS | 55.0% | |
TGTTGGCGTCCATCACATGG+AGG | - | chr4_3:18772569-18772588 | Msa0633310:CDS | 55.0% | |
GAGCATGAGCCTCCATGTGA+TGG | + | chr4_3:18772581-18772600 | None:intergenic | 55.0% | |
CATGGAGGCTCATGCTCTAG+TGG | - | chr4_3:18772584-18772603 | Msa0633310:CDS | 55.0% | |
AGGCTCATGCTCTAGTGGCT+AGG | - | chr4_3:18772589-18772608 | Msa0633310:CDS | 55.0% | |
AAGCATGCCTCTGCATCCAC+AGG | + | chr4_3:18772653-18772672 | None:intergenic | 55.0% | |
CGCGCATTGTGAGATACAGC+TGG | - | chr4_3:18773793-18773812 | Msa0633310:CDS | 55.0% | |
GGATGAGGAACGTCATGCCT+TGG | + | chr4_3:18773872-18773891 | None:intergenic | 55.0% | |
! | GAAAGATGGTTGGTTGGGCC+AGG | - | chr4_3:18773908-18773927 | Msa0633310:intron | 55.0% |
! | AAGATGGTTGGTTGGGCCAG+GGG | - | chr4_3:18773910-18773929 | Msa0633310:intron | 55.0% |
ATCTAATCCTTGGGCACCCC+TGG | + | chr4_3:18773929-18773948 | None:intergenic | 55.0% | |
CGAGATCTGCCTTTCTTGGG+GGG | - | chr4_3:18774061-18774080 | Msa0633310:intron | 55.0% | |
GAGATCTGCCTTTCTTGGGG+GGG | - | chr4_3:18774062-18774081 | Msa0633310:intron | 55.0% | |
! | TAGAAGCACAACAGCGGTCG+TGG | + | chr4_3:18774989-18775008 | None:intergenic | 55.0% |
CTGTTGCAGGTTGTCTCTGG+TGG | - | chr4_3:18775875-18775894 | Msa0633310:intron | 55.0% | |
AACTAGTATGCCCTCCTCCC+CGG | - | chr4_3:18775960-18775979 | Msa0633310:intron | 55.0% | |
CCATTGTCGGTACAAAGCCG+GGG | + | chr4_3:18775980-18775999 | None:intergenic | 55.0% | |
!! | TCTGGTTCTTCTGCAGGAGG+TGG | + | chr4_3:18776234-18776253 | None:intergenic | 55.0% |
! | CGCTGCGGGTAGAGTGTTTG+TGG | + | chr4_3:18768193-18768212 | None:intergenic | 60.0% |
TGGGGAAGCAAGAGACGCTG+CGG | + | chr4_3:18768208-18768227 | None:intergenic | 60.0% | |
GGATAAGGAGTCCGAGGTCC+TGG | + | chr4_3:18770901-18770920 | None:intergenic | 60.0% | |
GGGGGATTGGGTAGCTCAAC+TGG | + | chr4_3:18770935-18770954 | None:intergenic | 60.0% | |
! | CAATGCAGTGGGGGTGCAGA+AGG | - | chr4_3:18772512-18772531 | Msa0633310:CDS | 60.0% |
CATGGTTGCCCCCCCAAGAA+AGG | + | chr4_3:18774073-18774092 | None:intergenic | 60.0% | |
GGGAGGGCAACACAGGAAGA+AGG | + | chr4_3:18774472-18774491 | None:intergenic | 60.0% | |
! | ACAGCGGTCGTGGTAGTGTG+AGG | + | chr4_3:18774979-18774998 | None:intergenic | 60.0% |
TTGTCGGTACAAAGCCGGGG+AGG | + | chr4_3:18775977-18775996 | None:intergenic | 60.0% | |
! | CCCCGGCTTTGTACCGACAA+TGG | - | chr4_3:18775977-18775996 | Msa0633310:intron | 60.0% |
GGTTCTTCTGCAGGAGGTGG+AGG | + | chr4_3:18776231-18776250 | None:intergenic | 60.0% | |
GGGGAAGCAAGAGACGCTGC+GGG | + | chr4_3:18768207-18768226 | None:intergenic | 65.0% | |
! | CAGTGGGGGTGCAGAAGGCT+CGG | - | chr4_3:18772517-18772536 | Msa0633310:CDS | 65.0% |
CAAAAGTGGAGGGGAGGGGG+TGG | + | chr4_3:18774920-18774939 | None:intergenic | 65.0% | |
CGGTACAAAGCCGGGGAGGA+GGG | + | chr4_3:18775973-18775992 | None:intergenic | 65.0% | |
TCGGTACAAAGCCGGGGAGG+AGG | + | chr4_3:18775974-18775993 | None:intergenic | 65.0% | |
TGTACGCCCAAGGTGGCCGC+TGG | - | chr4_3:18776566-18776585 | Msa0633310:intron | 70.0% | |
GTACGCCCAAGGTGGCCGCT+GGG | - | chr4_3:18776567-18776586 | Msa0633310:intron | 70.0% | |
TACGCCCAAGGTGGCCGCTG+GGG | - | chr4_3:18776568-18776587 | Msa0633310:intron | 70.0% | |
CTTCCCCCAGCGGCCACCTT+GGG | + | chr4_3:18776575-18776594 | None:intergenic | 70.0% | |
TCTTCCCCCAGCGGCCACCT+TGG | + | chr4_3:18776576-18776595 | None:intergenic | 70.0% | |
!! | GGTTGGGCCAGGGGTGCCCA+AGG | - | chr4_3:18773919-18773938 | Msa0633310:intron | 75.0% |
GTGGAGGGGAGGGGGTGGAG+AGG | + | chr4_3:18774915-18774934 | None:intergenic | 75.0% | |
ACGCCCAAGGTGGCCGCTGG+GGG | - | chr4_3:18776569-18776588 | Msa0633310:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_3 | gene | 18768012 | 18777080 | 18768012 | ID=Msa0633310;Name=Msa0633310 |
chr4_3 | mRNA | 18768012 | 18777080 | 18768012 | ID=Msa0633310-mRNA-1;Parent=Msa0633310;Name=Msa0633310-mRNA-1;_AED=0.14;_eAED=0.14;_QI=77|0.75|0.84|0.92|1|1|13|391|463 |
chr4_3 | exon | 18768012 | 18768531 | 18768012 | ID=Msa0633310-mRNA-1:exon:5146;Parent=Msa0633310-mRNA-1 |
chr4_3 | exon | 18768829 | 18768917 | 18768829 | ID=Msa0633310-mRNA-1:exon:5145;Parent=Msa0633310-mRNA-1 |
chr4_3 | exon | 18769094 | 18769208 | 18769094 | ID=Msa0633310-mRNA-1:exon:5144;Parent=Msa0633310-mRNA-1 |
chr4_3 | exon | 18769307 | 18769390 | 18769307 | ID=Msa0633310-mRNA-1:exon:5143;Parent=Msa0633310-mRNA-1 |
chr4_3 | exon | 18769530 | 18769605 | 18769530 | ID=Msa0633310-mRNA-1:exon:5142;Parent=Msa0633310-mRNA-1 |
chr4_3 | exon | 18769963 | 18770048 | 18769963 | ID=Msa0633310-mRNA-1:exon:5141;Parent=Msa0633310-mRNA-1 |
chr4_3 | exon | 18770203 | 18770393 | 18770203 | ID=Msa0633310-mRNA-1:exon:5140;Parent=Msa0633310-mRNA-1 |
chr4_3 | exon | 18771119 | 18771162 | 18771119 | ID=Msa0633310-mRNA-1:exon:5139;Parent=Msa0633310-mRNA-1 |
chr4_3 | exon | 18772482 | 18772626 | 18772482 | ID=Msa0633310-mRNA-1:exon:5138;Parent=Msa0633310-mRNA-1 |
chr4_3 | exon | 18773778 | 18773874 | 18773778 | ID=Msa0633310-mRNA-1:exon:5137;Parent=Msa0633310-mRNA-1 |
chr4_3 | exon | 18774499 | 18774573 | 18774499 | ID=Msa0633310-mRNA-1:exon:5136;Parent=Msa0633310-mRNA-1 |
chr4_3 | exon | 18776648 | 18776692 | 18776648 | ID=Msa0633310-mRNA-1:exon:5135;Parent=Msa0633310-mRNA-1 |
chr4_3 | exon | 18776788 | 18777080 | 18776788 | ID=Msa0633310-mRNA-1:exon:5134;Parent=Msa0633310-mRNA-1 |
chr4_3 | five_prime_UTR | 18777004 | 18777080 | 18777004 | ID=Msa0633310-mRNA-1:five_prime_utr;Parent=Msa0633310-mRNA-1 |
chr4_3 | CDS | 18776788 | 18777003 | 18776788 | ID=Msa0633310-mRNA-1:cds;Parent=Msa0633310-mRNA-1 |
chr4_3 | CDS | 18776648 | 18776692 | 18776648 | ID=Msa0633310-mRNA-1:cds;Parent=Msa0633310-mRNA-1 |
chr4_3 | CDS | 18774499 | 18774573 | 18774499 | ID=Msa0633310-mRNA-1:cds;Parent=Msa0633310-mRNA-1 |
chr4_3 | CDS | 18773778 | 18773874 | 18773778 | ID=Msa0633310-mRNA-1:cds;Parent=Msa0633310-mRNA-1 |
chr4_3 | CDS | 18772482 | 18772626 | 18772482 | ID=Msa0633310-mRNA-1:cds;Parent=Msa0633310-mRNA-1 |
chr4_3 | CDS | 18771119 | 18771162 | 18771119 | ID=Msa0633310-mRNA-1:cds;Parent=Msa0633310-mRNA-1 |
chr4_3 | CDS | 18770203 | 18770393 | 18770203 | ID=Msa0633310-mRNA-1:cds;Parent=Msa0633310-mRNA-1 |
chr4_3 | CDS | 18769963 | 18770048 | 18769963 | ID=Msa0633310-mRNA-1:cds;Parent=Msa0633310-mRNA-1 |
chr4_3 | CDS | 18769530 | 18769605 | 18769530 | ID=Msa0633310-mRNA-1:cds;Parent=Msa0633310-mRNA-1 |
chr4_3 | CDS | 18769307 | 18769390 | 18769307 | ID=Msa0633310-mRNA-1:cds;Parent=Msa0633310-mRNA-1 |
chr4_3 | CDS | 18769094 | 18769208 | 18769094 | ID=Msa0633310-mRNA-1:cds;Parent=Msa0633310-mRNA-1 |
chr4_3 | CDS | 18768829 | 18768917 | 18768829 | ID=Msa0633310-mRNA-1:cds;Parent=Msa0633310-mRNA-1 |
chr4_3 | CDS | 18768403 | 18768531 | 18768403 | ID=Msa0633310-mRNA-1:cds;Parent=Msa0633310-mRNA-1 |
chr4_3 | three_prime_UTR | 18768012 | 18768402 | 18768012 | ID=Msa0633310-mRNA-1:three_prime_utr;Parent=Msa0633310-mRNA-1 |
Gene Sequence |
Protein sequence |