AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0786330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0786330 MtrunA17_Chr5g0443091 98.299 1058 17 1 1 1057 1 1058 0.0 2149
Msa0786330 MtrunA17_Chr3g0096241 81.096 1058 186 7 1 1056 1 1046 0.0 1766
Msa0786330 MtrunA17_Chr4g0064501 56.401 1078 411 20 1 1048 1 1049 0.0 1149
Msa0786330 MtrunA17_Chr3g0109841 27.437 554 319 21 171 693 286 787 3.47e-41 164
Msa0786330 MtrunA17_Chr6g0481131 26.437 522 320 19 171 677 285 757 2.27e-37 152
Msa0786330 MtrunA17_Chr1g0195241 26.015 542 332 19 171 688 264 760 2.58e-37 151
Msa0786330 MtrunA17_Chr6g0481171 26.226 530 311 19 171 677 157 629 3.22e-37 150
Msa0786330 MtrunA17_Chr2g0301621 25.898 529 320 20 171 672 277 760 1.74e-36 149
Msa0786330 MtrunA17_Chr5g0433761 25.725 517 319 18 171 663 283 758 1.53e-35 145
Msa0786330 MtrunA17_Chr4g0070011 25.331 529 323 20 171 672 279 762 1.59e-34 142
Msa0786330 MtrunA17_Chr7g0269581 25.145 517 322 17 171 663 279 754 1.82e-34 142
Msa0786330 MtrunA17_Chr6g0481261 43.529 85 42 2 569 653 24 102 4.02e-14 69.3
Msa0786330 MtrunA17_Chr6g0481241 52.459 61 29 0 569 629 24 84 1.69e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0786330 AT1G04920.1 73.008 1067 268 11 1 1054 1 1060 0.0 1604
Msa0786330 AT4G10120.2 56.942 1066 400 12 1 1039 1 1034 0.0 1186
Msa0786330 AT4G10120.3 56.942 1066 400 12 1 1039 1 1034 0.0 1186
Msa0786330 AT4G10120.1 56.942 1066 400 12 1 1039 1 1034 0.0 1186
Msa0786330 AT5G20280.1 56.620 1065 421 18 1 1051 1 1038 0.0 1168
Msa0786330 AT5G11110.1 55.929 1071 427 16 1 1054 1 1043 0.0 1153
Msa0786330 AT4G10120.4 58.698 891 334 9 150 1038 1 859 0.0 1037
Msa0786330 AT4G10120.5 59.028 864 321 8 176 1038 1 832 0.0 1014
Msa0786330 AT1G73370.2 26.527 524 306 17 171 663 241 716 6.07e-39 157
Msa0786330 AT1G73370.3 26.527 524 306 17 171 663 285 760 7.76e-39 157
Msa0786330 AT1G73370.1 26.527 524 306 17 171 663 285 760 7.76e-39 157
Msa0786330 AT5G49190.3 25.714 525 327 16 171 672 212 696 1.37e-38 155
Msa0786330 AT5G49190.2 25.714 525 327 16 171 672 268 752 1.82e-38 155
Msa0786330 AT5G49190.1 25.714 525 327 16 171 672 278 762 2.36e-38 155
Msa0786330 AT4G02280.1 26.679 521 327 19 171 672 281 765 1.32e-35 146
Msa0786330 AT5G20830.3 26.476 525 322 20 171 672 281 764 2.84e-35 145
Msa0786330 AT5G20830.2 26.476 525 322 20 171 672 281 764 2.84e-35 145
Msa0786330 AT5G20830.1 26.476 525 322 20 171 672 281 764 2.84e-35 145
Msa0786330 AT3G43190.2 25.788 539 308 20 171 672 281 764 3.21e-35 145
Msa0786330 AT3G43190.1 25.788 539 308 20 171 672 281 764 3.21e-35 145
Msa0786330 AT5G37180.3 26.499 517 315 20 171 663 29 504 9.12e-35 142
Msa0786330 AT5G37180.2 26.499 517 315 20 171 663 87 562 1.25e-34 142
Msa0786330 AT5G37180.1 25.974 539 330 21 171 685 275 768 2.73e-34 142

Find 270 sgRNAs with CRISPR-Local

Find 364 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAGAAAGTTTGTGATTAA+TGG 0.111799 5_2:+71769906 Msa0786330:exon
CATCTCTGTTTCCCATTATA+AGG 0.149024 5_2:-71772895 None:intergenic
AGAACATGTGTTGGCGTATT+TGG 0.175840 5_2:+71770169 Msa0786330:CDS
GACAGTGCTGCTCTTCTTTC+GGG 0.187244 5_2:+71771645 Msa0786330:CDS
TTCATTCACTTGAACATTTC+CGG 0.194078 5_2:-71774091 None:intergenic
CCTCAAACTGCAAGAGTTTC+GGG 0.218308 5_2:+71774015 Msa0786330:CDS
CAAAAGCGTTACCTTCAATT+TGG 0.220963 5_2:+71772316 Msa0786330:CDS
ACAACTCTATTAAAGGCTTT+TGG 0.226121 5_2:+71772747 Msa0786330:CDS
TCAGATTGTCTATGATGTTT+AGG 0.234949 5_2:-71773010 None:intergenic
AGAGTTGTTATGTTCTTCTT+TGG 0.246298 5_2:-71772732 None:intergenic
TTGAAGCAACTTTCAAAATC+TGG 0.246308 5_2:+71775039 Msa0786330:CDS
TGCATTCTTACCGCCATTCT+AGG 0.250617 5_2:-71771957 None:intergenic
GAGAGATCTCCGTCGACTTC+AGG 0.253821 5_2:-71772261 None:intergenic
GACATAGAAGATATGTCTTC+TGG 0.259658 5_2:+71772917 Msa0786330:CDS
TTCTAAACAGACCCTTATAA+TGG 0.264832 5_2:+71772883 Msa0786330:intron
GATTACGAGGAAATGATTTC+TGG 0.266581 5_2:+71774859 Msa0786330:CDS
GAACATAACAACTCTATTAA+AGG 0.269752 5_2:+71772740 Msa0786330:CDS
CAAATTGAAGGTAACGCTTT+TGG 0.275946 5_2:-71772315 None:intergenic
TGACAGTGCTGCTCTTCTTT+CGG 0.280821 5_2:+71771644 Msa0786330:CDS
CAATATCAGGAGATGATATT+TGG 0.291054 5_2:-71771341 None:intergenic
CAGATTGTCTATGATGTTTA+GGG 0.292808 5_2:-71773009 None:intergenic
ATCTCGAGAAAGAACTTCTT+TGG 0.293144 5_2:+71771490 Msa0786330:CDS
CCCTCAAACTGCAAGAGTTT+CGG 0.299924 5_2:+71774014 Msa0786330:CDS
CAAACAAATACCCTCTATTA+AGG 0.300652 5_2:+71773881 Msa0786330:CDS
TTTCATAAATCCTGCTTTAG+TGG 0.303018 5_2:+71773161 Msa0786330:CDS
AATATGGTCTGATGATAAAA+AGG 0.307414 5_2:+71770669 Msa0786330:CDS
TCCCTCAGGCTTTCAATTGA+TGG 0.314450 5_2:+71773742 Msa0786330:CDS
CATGAAAGGAGTTGTGTCTA+AGG 0.320713 5_2:+71774900 Msa0786330:CDS
TCATCTCTTTGGTAGCTTCC+TGG 0.321337 5_2:-71774946 None:intergenic
GTTATGTTCTTCTTTGGATC+TGG 0.322685 5_2:-71772726 None:intergenic
AGGATCTCCATTACTTTCAT+AGG 0.326213 5_2:-71773938 None:intergenic
TCTTCAACAAAGTACTTTGT+TGG 0.326350 5_2:-71770054 None:intergenic
GAGAAAAGGGAGATGGCATT+GGG 0.330516 5_2:+71770587 Msa0786330:CDS
TTCAATTTCCATTCTATACT+TGG 0.339555 5_2:-71775132 None:intergenic
ATTGACAAATATGACCTATA+TGG 0.346454 5_2:+71772974 Msa0786330:CDS
AACTTTATATTATCCTCTTA+AGG 0.347172 5_2:+71770698 Msa0786330:CDS
GCAAACATGTATGTCATTCT+TGG 0.348150 5_2:+71774820 Msa0786330:CDS
GTCTTTCAATGATTCACTTA+AGG 0.350306 5_2:+71773705 Msa0786330:CDS
ATCGCAATCAACTTCTTATC+AGG 0.351219 5_2:-71773958 None:intergenic
TTTGCCTGATCAAGATTATT+CGG 0.355143 5_2:+71774185 Msa0786330:CDS
CCTGCTTTAGTGGAACCTTT+TGG 0.355668 5_2:+71773171 Msa0786330:CDS
TTGGCACAACATCATCTCTT+TGG 0.357644 5_2:-71774957 None:intergenic
GTGGACCGGTTGACATTAAT+CGG 0.362697 5_2:+71773334 Msa0786330:CDS
GGCTTATCTTTATGTAATGA+TGG 0.366097 5_2:-71769801 None:intergenic
CACATTCAAGAATTTGTAGA+TGG 0.366199 5_2:+71771516 Msa0786330:CDS
GCTGGTAATGAGTGGATTAA+TGG 0.367627 5_2:+71769928 Msa0786330:CDS
GGAGAAAAGGGAGATGGCAT+TGG 0.367916 5_2:+71770586 Msa0786330:CDS
ATGCTTCTAGCCAGGAAATA+TGG 0.370871 5_2:+71770653 Msa0786330:CDS
CCATAGCTCCAATCAATATC+AGG 0.371116 5_2:-71771354 None:intergenic
CCCGAAACTCTTGCAGTTTG+AGG 0.372398 5_2:-71774015 None:intergenic
TATCATCAGACCATATTTCC+TGG 0.374293 5_2:-71770663 None:intergenic
ATCTCTGTTTCCCATTATAA+GGG 0.375269 5_2:-71772894 None:intergenic
CTCAACATGTCAAAAGTATT+GGG 0.379807 5_2:+71771555 Msa0786330:CDS
GGAGATCTCTCACAGCTTAC+TGG 0.381308 5_2:+71772273 Msa0786330:CDS
TAAGAATAATATACCTTAAG+AGG 0.382181 5_2:-71770711 None:intergenic
CTTTGGATCTGGCCTTGATA+AGG 0.382917 5_2:-71772715 None:intergenic
TCTTCATCGTACATGGCTTA+AGG 0.392250 5_2:+71770104 Msa0786330:CDS
TATCATCTCCTGATATTGAT+TGG 0.395461 5_2:+71771346 Msa0786330:CDS
TAAGTTGTTACTTACAAGAT+TGG 0.395594 5_2:-71772796 None:intergenic
CTTGATAAGGCTAATATCAT+AGG 0.399864 5_2:-71772702 None:intergenic
TCTAAACAGACCCTTATAAT+GGG 0.402227 5_2:+71772884 Msa0786330:intron
CTTGGTAGAGATTCTGATAC+TGG 0.403885 5_2:+71771162 Msa0786330:CDS
TCTCAACATGTCAAAAGTAT+TGG 0.409967 5_2:+71771554 Msa0786330:CDS
GCAAGAAATTGACGAACAAT+GGG 0.412594 5_2:+71771848 Msa0786330:CDS
AGAGTTGTCAGAAGGAGAAA+AGG 0.414100 5_2:+71770573 Msa0786330:CDS
CATTGTTATACGTAGAGGTC+GGG 0.418406 5_2:-71775327 None:intergenic
TTTATACAGTTTGCATGGAT+TGG 0.418964 5_2:+71771119 Msa0786330:intron
TTCTCCTTCTGACAACTCTT+CGG 0.419102 5_2:-71770569 None:intergenic
CTCACTTCTAACCAAATTGA+AGG 0.421384 5_2:-71772327 None:intergenic
TTACCTTTCCAAGTATAGAA+TGG 0.425096 5_2:+71775124 Msa0786330:three_prime_UTR
CAGCTTACTGGTGGTGCTGA+TGG 0.429526 5_2:+71772285 Msa0786330:CDS
CCGAAACTCTTGCAGTTTGA+GGG 0.429535 5_2:-71774014 None:intergenic
ATGCTATAGTTTGTAGTAGT+GGG 0.429593 5_2:+71774118 Msa0786330:CDS
TAAATTTCACTTACCTTGCT+AGG 0.433136 5_2:-71774369 None:intergenic
TATGTCATTCTTGGAGAAAC+CGG 0.434715 5_2:+71774829 Msa0786330:CDS
CCGTCTTCTGTGTGAACACC+AGG 0.435238 5_2:-71774156 None:intergenic
AAGATAAGGAAGCAAGATTC+TGG 0.437232 5_2:+71773823 Msa0786330:CDS
AAAGGTTAGCATACAGAAGA+TGG 0.439924 5_2:+71770506 Msa0786330:CDS
GAAGAACTGCTTAGAGGTCC+AGG 0.441146 5_2:+71774928 Msa0786330:CDS
TGAAAGTTGCTTCAAAGCAT+TGG 0.442129 5_2:-71775031 None:intergenic
GGTACATATAGATTATCGTT+GGG 0.443867 5_2:+71774206 Msa0786330:CDS
AAATAAGTTCGGCAGTGTTC+AGG 0.443986 5_2:-71773604 None:intergenic
GAACAATGGGGACTTTATGA+TGG 0.444187 5_2:+71771861 Msa0786330:CDS
TGCTCGTGCACTTGCGAAAA+CGG 0.448989 5_2:+71771287 Msa0786330:CDS
GATTATCGTTGGGGCGTTGA+AGG 0.457507 5_2:+71774216 Msa0786330:CDS
TGTTTCTGCACTCATGCCAT+AGG 0.464242 5_2:-71773549 None:intergenic
CCTGATATTGATTGGAGCTA+TGG 0.464378 5_2:+71771354 Msa0786330:CDS
ATGATAGCACTGGAGAGAGC+AGG 0.465838 5_2:+71771424 Msa0786330:CDS
TCTTCTTGCATCTAGAGCTC+AGG 0.469294 5_2:+71774654 Msa0786330:CDS
ACATAGAAGATATGTCTTCT+GGG 0.471270 5_2:+71772918 Msa0786330:CDS
GCAACAAGAGGACTCTCATT+TGG 0.471297 5_2:-71774976 None:intergenic
TCATCCTCATCATTATCATC+TGG 0.472516 5_2:-71771405 None:intergenic
AGTGTTCAGGCCACGAGAAA+AGG 0.473744 5_2:-71773591 None:intergenic
GTGTGGCCTTACGTGATTCA+TGG 0.473946 5_2:+71771603 Msa0786330:CDS
ATGACTTGAGGCAAAAGCTT+CGG 0.474230 5_2:+71774569 Msa0786330:CDS
GCAGGTTATCCCTCCTGGTA+TGG 0.477625 5_2:+71772206 Msa0786330:intron
TGAATTAAGTCAAAATGCTC+CGG 0.477845 5_2:+71775185 Msa0786330:three_prime_UTR
TTTCCATTCTATACTTGGAA+AGG 0.480274 5_2:-71775127 None:intergenic
ATATTTATCGCGCGGACCAA+AGG 0.480496 5_2:-71771469 None:intergenic
TTTCCGCAGGTTATCCCTCC+TGG 0.481354 5_2:+71772201 Msa0786330:intron
AACCCTTTGCTGCTCTTCAA+CGG 0.481602 5_2:-71769995 None:intergenic
TCAATTAAAGTAAGACCAAA+AGG 0.482267 5_2:-71773186 None:intergenic
TATTTATCGCGCGGACCAAA+GGG 0.483641 5_2:-71771468 None:intergenic
CTGCGCCTTCGCCTTAATAG+AGG 0.484197 5_2:-71773892 None:intergenic
CGTGCACTTGCGAAAACGGC+AGG 0.486392 5_2:+71771291 Msa0786330:CDS
CGGTACATATAGATTATCGT+TGG 0.487332 5_2:+71774205 Msa0786330:CDS
ATTACCCGATTAATGTCAAC+CGG 0.487566 5_2:-71773339 None:intergenic
ATCTTTATGTAATGATGGGA+AGG 0.489563 5_2:-71769796 None:intergenic
GGCAAGAAATTGACGAACAA+TGG 0.492826 5_2:+71771847 Msa0786330:CDS
TTAGGTATTTGTTCGTCCGT+TGG 0.493392 5_2:+71774785 Msa0786330:intron
GGTTCAGAAGAACTGCTTAG+AGG 0.494844 5_2:+71774922 Msa0786330:CDS
CTTGATTCCTATGAAAGTAA+TGG 0.497493 5_2:+71773931 Msa0786330:CDS
AATTGACGCCACGCCTATCA+CGG 0.500584 5_2:-71771917 None:intergenic
GAAAGTTTGTGATTAATGGC+TGG 0.501296 5_2:+71769910 Msa0786330:exon
CCAAAAGGTTCCACTAAAGC+AGG 0.501308 5_2:-71773171 None:intergenic
TGAAGAGCAGCAAAGGGTTG+CGG 0.502202 5_2:+71769999 Msa0786330:CDS
TGCTTAAGACACGTTTCACT+TGG 0.502370 5_2:-71773801 None:intergenic
AGAGATCTCCGTCGACTTCA+GGG 0.502979 5_2:-71772260 None:intergenic
AGTTGATATCCTCCCACGAT+TGG 0.502981 5_2:-71771746 None:intergenic
GCAGCAAATCTATATATCTC+AGG 0.507709 5_2:-71773037 None:intergenic
AGAAGCAGAAGAGCTTTCCT+TGG 0.507831 5_2:+71771794 Msa0786330:CDS
GACAAGTTCTGCAGCATCCA+AGG 0.508190 5_2:-71771811 None:intergenic
GAGTTGTCAGAAGGAGAAAA+GGG 0.510562 5_2:+71770574 Msa0786330:CDS
CAACTCTTCGGACAATTCCT+CGG 0.510725 5_2:-71770557 None:intergenic
AACAATGGGGACTTTATGAT+GGG 0.512035 5_2:+71771862 Msa0786330:CDS
GTTCTCACTGGTCATTCACT+TGG 0.513001 5_2:+71771687 Msa0786330:CDS
GTTGTCATCCTATGTACTGC+AGG 0.513171 5_2:+71774605 Msa0786330:CDS
TCAGAGGCATGCTTCTAGCC+AGG 0.517688 5_2:+71770645 Msa0786330:CDS
TGATAGCACTGGAGAGAGCA+GGG 0.520652 5_2:+71771425 Msa0786330:CDS
TTCCTCGTAATCAGTGTCCC+CGG 0.523537 5_2:-71774848 None:intergenic
GCTTATCTTTATGTAATGAT+GGG 0.525084 5_2:-71769800 None:intergenic
AGAAAAGGGAGATGGCATTG+GGG 0.525201 5_2:+71770588 Msa0786330:CDS
TCTTGCTCGCAAGAAGAAGA+AGG 0.528534 5_2:+71770194 Msa0786330:CDS
TGTACCGAATAATCTTGATC+AGG 0.529034 5_2:-71774189 None:intergenic
AGTCTGATCTTCATCGTACA+TGG 0.529444 5_2:+71770097 Msa0786330:CDS
ACAACGGAATTTCTAGCATC+CGG 0.529824 5_2:+71774072 Msa0786330:CDS
CTCTATTAAGGCGAAGGCGC+AGG 0.531101 5_2:+71773893 Msa0786330:CDS
CCACCGTTGAAGAGCAGCAA+AGG 0.534392 5_2:+71769992 Msa0786330:CDS
GATGCTATAGTTTGTAGTAG+TGG 0.535438 5_2:+71774117 Msa0786330:CDS
GGTATGCGACATGTCCATAT+AGG 0.536117 5_2:-71772988 None:intergenic
TATATCATAAGAATACCCTT+TGG 0.536178 5_2:+71771453 Msa0786330:CDS
AAACTTATGAATGCCTCTAC+TGG 0.539303 5_2:+71774258 Msa0786330:CDS
TGGTCGTTACATGCCTAGAA+TGG 0.539666 5_2:+71771944 Msa0786330:CDS
CACAAGCAAACCATTGTTGA+GGG 0.539762 5_2:-71773467 None:intergenic
TTGTCATCCTATGTACTGCA+GGG 0.539881 5_2:+71774606 Msa0786330:CDS
GCGGCTGCAGCGAGAGAAAG+TGG 0.541974 5_2:+71770018 Msa0786330:CDS
GAAGATATGTCTTCTGGGAG+TGG 0.542712 5_2:+71772923 Msa0786330:CDS
GAATGACCAGTGAGAACCAT+TGG 0.543147 5_2:-71771681 None:intergenic
CTATGATATTAGCCTTATCA+AGG 0.545314 5_2:+71772703 Msa0786330:CDS
TCTACTGGTGAAGAGACTAA+TGG 0.545770 5_2:+71774273 Msa0786330:CDS
ATTAGTCTCTTCACCAGTAG+AGG 0.546211 5_2:-71774271 None:intergenic
ATTCTCACAGATTAAATATG+TGG 0.550024 5_2:+71771257 Msa0786330:intron
GAATTAAGTCAAAATGCTCC+GGG 0.550056 5_2:+71775186 Msa0786330:three_prime_UTR
ATGTCATTCTTGGAGAAACC+GGG 0.550941 5_2:+71774830 Msa0786330:CDS
AAAGTATTGGGTGAACAAGT+TGG 0.551912 5_2:+71771567 Msa0786330:CDS
CTCACTCAGGCAGCTGCACA+TGG 0.552769 5_2:+71773285 Msa0786330:intron
CCTGGTGTTCACACAGAAGA+CGG 0.553137 5_2:+71774156 Msa0786330:CDS
CACCGTTGAAGAGCAGCAAA+GGG 0.554085 5_2:+71769993 Msa0786330:CDS
AATGATGAGGATGATAGCAC+TGG 0.554095 5_2:+71771414 Msa0786330:CDS
CATCTAGAGCTCAGGCACTC+AGG 0.554105 5_2:+71774662 Msa0786330:CDS
TAGATTTGCTGCTAAAACAA+AGG 0.554181 5_2:+71773048 Msa0786330:CDS
CGAGGAGAAAACATGGAGCT+TGG 0.556627 5_2:+71771144 Msa0786330:CDS
CCACGCGTGTCAAATAAGTT+CGG 0.557990 5_2:-71773615 None:intergenic
ATGTTCAAGACATGTCCCTC+AGG 0.559659 5_2:+71773728 Msa0786330:CDS
CCTCAACAATGGTTTGCTTG+TGG 0.561331 5_2:+71773468 Msa0786330:CDS
GCTATACTATCGACCGGTGG+TGG 0.561509 5_2:+71769961 Msa0786330:CDS
AGTTGATTGCGATAGTTCAA+AGG 0.561574 5_2:+71773968 Msa0786330:CDS
AGGCAAAAGCTTCGGATGAG+AGG 0.562981 5_2:+71774577 Msa0786330:CDS
TAAGCAAGGGCGCCAATCGT+GGG 0.563172 5_2:+71771734 Msa0786330:CDS
TTGTTGCCACTCGTAATACA+AGG 0.564168 5_2:+71770127 Msa0786330:CDS
CATGGACACTATGCTGATGC+TGG 0.565070 5_2:+71771621 Msa0786330:CDS
ATTGACGCCACGCCTATCAC+GGG 0.565168 5_2:-71771916 None:intergenic
AGATTCTGATACTGGAGGAC+AGG 0.566026 5_2:+71771170 Msa0786330:CDS
GACTTCAAATCTTCCTCAAG+AGG 0.566808 5_2:-71774309 None:intergenic
GGGTGCTTTGAATGTGCCAA+TGG 0.569075 5_2:+71771665 Msa0786330:CDS
CTGGTGTTCACACAGAAGAC+GGG 0.569189 5_2:+71774157 Msa0786330:CDS
GAGGCATATTTGTAGGTGGA+AGG 0.570045 5_2:+71770472 Msa0786330:intron
AACGTGTCTTAAGCAAGATA+AGG 0.570558 5_2:+71773809 Msa0786330:CDS
GCATTGTTATACGTAGAGGT+CGG 0.571535 5_2:-71775328 None:intergenic
AAGGTTAGCATACAGAAGAT+GGG 0.571711 5_2:+71770507 Msa0786330:CDS
CACAAGACTATAATCATGAA+AGG 0.574224 5_2:+71774886 Msa0786330:CDS
TTAAGCAAGGGCGCCAATCG+TGG 0.576345 5_2:+71771733 Msa0786330:CDS
CTCGAACAACTGCTTAAGCA+AGG 0.576827 5_2:+71771720 Msa0786330:CDS
TCTTTATGTAATGATGGGAA+GGG 0.577496 5_2:-71769795 None:intergenic
CCTACAGAAATGCTATCTGC+AGG 0.579559 5_2:+71771381 Msa0786330:CDS
GCTAATATCATAGGCTTGTG+AGG 0.579835 5_2:-71772693 None:intergenic
CAAAATAAATGATCCTAGCA+AGG 0.584156 5_2:+71774356 Msa0786330:CDS
CCTTTGCTGCTCTTCAACGG+TGG 0.585427 5_2:-71769992 None:intergenic
TTGCGTGCCCGTGATAGGCG+TGG 0.587334 5_2:+71771909 Msa0786330:CDS
TAATGTTAGGCCCTCAACAA+TGG 0.587618 5_2:+71773457 Msa0786330:intron
AAGCAACTTTCAAAATCTGG+AGG 0.587763 5_2:+71775042 Msa0786330:CDS
CCGAACTTATTTGACACGCG+TGG 0.589671 5_2:+71773615 Msa0786330:CDS
TTGCAACATTTAATCTCCAA+CGG 0.590507 5_2:-71774801 None:intergenic
AGGCGTGGCGTCAATTGTCA+TGG 0.590517 5_2:+71771924 Msa0786330:CDS
TTGGGTGAACAAGTTGGCGG+TGG 0.592215 5_2:+71771573 Msa0786330:CDS
TCTACAAATTCTTGAATGTG+AGG 0.592308 5_2:-71771513 None:intergenic
ATGAAAGGAGTTGTGTCTAA+GGG 0.592431 5_2:+71774901 Msa0786330:CDS
GGGAGTGAAGTTTATTACCC+TGG 0.593208 5_2:+71774138 Msa0786330:CDS
GGTGGTAGAAGCACCACCAC+CGG 0.593782 5_2:-71769974 None:intergenic
GCGTGGATGCGTGTAGAATG+AGG 0.594241 5_2:+71773632 Msa0786330:CDS
TGGAAGGAGAAGAACTTCAA+AGG 0.594294 5_2:+71770488 Msa0786330:CDS
GTAGTAGTAGTTTGCCATTG+TGG 0.595018 5_2:-71773658 None:intergenic
CCTGCAGATAGCATTTCTGT+AGG 0.597226 5_2:-71771381 None:intergenic
CACCATCAATTGAAAGCCTG+AGG 0.598224 5_2:-71773744 None:intergenic
TCACTAATGCATGCAACAAG+AGG 0.598435 5_2:-71774988 None:intergenic
TGGACCGGTTGACATTAATC+GGG 0.600202 5_2:+71773335 Msa0786330:CDS
TATACATCGTTCATTGCATG+TGG 0.602722 5_2:+71769747 Msa0786330:five_prime_UTR
TTCTCGAGATATTTATCGCG+CGG 0.603677 5_2:-71771477 None:intergenic
TGAGCTCTAGATGCAAGAAG+AGG 0.603752 5_2:-71774652 None:intergenic
TAGTGTCCATGAATCACGTA+AGG 0.604874 5_2:-71771609 None:intergenic
AGCTGCACATGGACTGCCAA+TGG 0.606889 5_2:+71773296 Msa0786330:CDS
TCAGAAGGAGAAAAGGGAGA+TGG 0.607859 5_2:+71770580 Msa0786330:CDS
CCACAAGCAAACCATTGTTG+AGG 0.608970 5_2:-71773468 None:intergenic
AATACCCTCTATTAAGGCGA+AGG 0.608972 5_2:+71773887 Msa0786330:CDS
CAAGGAAGGTTGATGACTTG+AGG 0.610043 5_2:+71774557 Msa0786330:CDS
AGAGGTCGGGGTTCGAACAT+CGG 0.611101 5_2:-71775314 None:intergenic
AATGTGCCAATGGTTCTCAC+TGG 0.613125 5_2:+71771675 Msa0786330:CDS
CAAGACTCGAGAACATGTGT+TGG 0.613633 5_2:+71770160 Msa0786330:CDS
TTGTCCGAAGAGTTGTCAGA+AGG 0.613883 5_2:+71770565 Msa0786330:CDS
GAAGATGGCCCTGAAGTCGA+CGG 0.615795 5_2:+71772252 Msa0786330:CDS
TGTCATCCTATGTACTGCAG+GGG 0.617290 5_2:+71774607 Msa0786330:CDS
AATGTCGTGATACAAGAAGA+TGG 0.619565 5_2:+71772237 Msa0786330:CDS
GCAATTGCTTGATGATCATG+AGG 0.622487 5_2:-71773493 None:intergenic
GGGAAATAGAACAAGGACGA+AGG 0.623524 5_2:+71770527 Msa0786330:CDS
AACAGCAACTAGTCCTCTTG+AGG 0.624548 5_2:+71774296 Msa0786330:CDS
ATTGTTATACGTAGAGGTCG+GGG 0.624722 5_2:-71775326 None:intergenic
ACATTGCTGAAGTCCATACC+AGG 0.626273 5_2:-71772219 None:intergenic
TCGAACAACTGCTTAAGCAA+GGG 0.629747 5_2:+71771721 Msa0786330:CDS
CTTGAGGCTATACTATCGAC+CGG 0.633150 5_2:+71769955 Msa0786330:CDS
AACTTGTCATCACTAGTACA+AGG 0.634602 5_2:+71771826 Msa0786330:CDS
GTACATATAGATTATCGTTG+GGG 0.638028 5_2:+71774207 Msa0786330:CDS
GGAAATAGAACAAGGACGAA+GGG 0.642997 5_2:+71770528 Msa0786330:CDS
GCAAGGGCGCCAATCGTGGG+AGG 0.643681 5_2:+71771737 Msa0786330:CDS
AACCGGGGACACTGATTACG+AGG 0.645232 5_2:+71774846 Msa0786330:CDS
GTATTGGGTGAACAAGTTGG+CGG 0.646506 5_2:+71771570 Msa0786330:CDS
AGGACGAAGGGATGCAACCG+AGG 0.650858 5_2:+71770540 Msa0786330:CDS
ACGTTCCCTTGTATTACGAG+TGG 0.651461 5_2:-71770133 None:intergenic
ACCATCAATTGAAAGCCTGA+GGG 0.652346 5_2:-71773743 None:intergenic
CGGTCGATAGTATAGCCTCA+AGG 0.654154 5_2:-71769954 None:intergenic
TGCACATGGACTGCCAATGG+TGG 0.655157 5_2:+71773299 Msa0786330:CDS
TGAATCACGTAAGGCCACAC+AGG 0.657696 5_2:-71771600 None:intergenic
CAACGTATAAGATAATGAGA+AGG 0.658712 5_2:+71771769 Msa0786330:CDS
GATCTCTCACAGCTTACTGG+TGG 0.658933 5_2:+71772276 Msa0786330:CDS
TGCTGAAGTCCATACCAGGA+GGG 0.659439 5_2:-71772215 None:intergenic
ATGAGTGCAGAAACAATGGT+TGG 0.659698 5_2:+71773557 Msa0786330:CDS
ATTGGTACGAGGAGAAAACA+TGG 0.659978 5_2:+71771137 Msa0786330:CDS
GATTAATGGCTGGTAATGAG+TGG 0.660879 5_2:+71769920 Msa0786330:exon
CATGTTGAGAATGTGAGCTA+AGG 0.670102 5_2:-71771541 None:intergenic
AGAAGATGGGAAATAGAACA+AGG 0.672517 5_2:+71770520 Msa0786330:CDS
GTCATCCTATGTACTGCAGG+GGG 0.673599 5_2:+71774608 Msa0786330:CDS
TGGCATGAGTGCAGAAACAA+TGG 0.674469 5_2:+71773553 Msa0786330:CDS
AGTTTGCATGGATTGGTACG+AGG 0.674490 5_2:+71771126 Msa0786330:intron
GTAGAATGAGGCATCCACAA+TGG 0.679184 5_2:+71773644 Msa0786330:CDS
TCGTTACATGCCTAGAATGG+CGG 0.685556 5_2:+71771947 Msa0786330:CDS
GAATTTGCTGCATCAAGCGG+TGG 0.686684 5_2:+71773766 Msa0786330:CDS
GGTGAATTTGCTGCATCAAG+CGG 0.687360 5_2:+71773763 Msa0786330:CDS
GGTAGAGATTCTGATACTGG+AGG 0.687530 5_2:+71771165 Msa0786330:CDS
GTGGATTAATGGCTACCTTG+AGG 0.690844 5_2:+71769939 Msa0786330:CDS
TATGACAATGCAAGAAACAA+CGG 0.693451 5_2:+71774056 Msa0786330:CDS
CGTCTTCTGTGTGAACACCA+GGG 0.693652 5_2:-71774155 None:intergenic
GAGGCTATACTATCGACCGG+TGG 0.697000 5_2:+71769958 Msa0786330:CDS
GATAGCACTGGAGAGAGCAG+GGG 0.699662 5_2:+71771426 Msa0786330:CDS
TTGCTGAAGTCCATACCAGG+AGG 0.704079 5_2:-71772216 None:intergenic
TGTCATTCTTGGAGAAACCG+GGG 0.712395 5_2:+71774831 Msa0786330:CDS
ATGCATTAGTGAAACAACAG+AGG 0.717974 5_2:+71774999 Msa0786330:CDS
TTGGCGGTGGACAACCTGTG+TGG 0.719682 5_2:+71771586 Msa0786330:CDS
AGGTCCAGATGATAATGATG+AGG 0.720340 5_2:+71771401 Msa0786330:CDS
TGTTGCCACTCGTAATACAA+GGG 0.724087 5_2:+71770128 Msa0786330:CDS
CAAGAAATTGACGAACAATG+GGG 0.742041 5_2:+71771849 Msa0786330:CDS
TGAATGTTACATGATCGACA+TGG 0.748166 5_2:-71769822 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCCTATATTTTAAAATAAA+TGG + chr5_2:71773416-71773435 Msa0786330:intron 10.0%
!! TTATTATTAACTAAATGAGA+GGG - chr5_2:71771230-71771249 None:intergenic 15.0%
!! ATTATTATTAACTAAATGAG+AGG - chr5_2:71771231-71771250 None:intergenic 15.0%
!! ATTAATTGATATGTTATGAT+AGG - chr5_2:71772068-71772087 None:intergenic 15.0%
!!! CAATTAATTCATACTATTTT+AGG + chr5_2:71772080-71772099 Msa0786330:intron 15.0%
!! GTTTATTATTTAAATGTGTT+AGG + chr5_2:71774767-71774786 Msa0786330:intron 15.0%
!!! CTTTTTAAAAGTGAATAAAT+GGG + chr5_2:71775287-71775306 Msa0786330:three_prime_UTR 15.0%
!!! TTTTTAAAAGTGAATAAATG+GGG + chr5_2:71775288-71775307 Msa0786330:three_prime_UTR 15.0%
!! GTATGTTTATGAATGAAAAT+TGG - chr5_2:71770253-71770272 None:intergenic 20.0%
!! AACTTTATATTATCCTCTTA+AGG + chr5_2:71770698-71770717 Msa0786330:CDS 20.0%
!! TAAGAATAATATACCTTAAG+AGG - chr5_2:71770714-71770733 None:intergenic 20.0%
!! AATACTAATAGTTCAAAGTT+TGG + chr5_2:71772578-71772597 Msa0786330:intron 20.0%
!! AAAATATCAAACTAGTTAGT+TGG - chr5_2:71773130-71773149 None:intergenic 20.0%
!!! CGCCATTTATTTTAAAATAT+AGG - chr5_2:71773421-71773440 None:intergenic 20.0%
!!! TGATTCTTTGTTATAATGTT+AGG + chr5_2:71773444-71773463 Msa0786330:intron 20.0%
!!! TTCTATAAATTGTTCGTTTT+AGG + chr5_2:71774534-71774553 Msa0786330:intron 20.0%
!!! TGAATACTATGGAAATTTTA+TGG - chr5_2:71774737-71774756 None:intergenic 20.0%
!!! CCATTTATTCACTTTTAAAA+AGG - chr5_2:71775289-71775308 None:intergenic 20.0%
!!! CCTTTTTAAAAGTGAATAAA+TGG + chr5_2:71775286-71775305 Msa0786330:three_prime_UTR 20.0%
! GCTTATCTTTATGTAATGAT+GGG - chr5_2:71769803-71769822 None:intergenic 25.0%
! CAAAGAAAGTTTGTGATTAA+TGG + chr5_2:71769906-71769925 Msa0786330:exon 25.0%
! AATATGGTCTGATGATAAAA+AGG + chr5_2:71770669-71770688 Msa0786330:CDS 25.0%
! AGGTATATTATTCTTAGACT+CGG + chr5_2:71770718-71770737 Msa0786330:intron 25.0%
! AATAAGCTGAAAACGATTTA+TGG + chr5_2:71770876-71770895 Msa0786330:intron 25.0%
! TTGATGTGAACAAAGAATAA+GGG - chr5_2:71770997-71771016 None:intergenic 25.0%
! TTTGATGTGAACAAAGAATA+AGG - chr5_2:71770998-71771017 None:intergenic 25.0%
! ATTCTCACAGATTAAATATG+TGG + chr5_2:71771257-71771276 Msa0786330:intron 25.0%
! TATATCATAAGAATACCCTT+TGG + chr5_2:71771453-71771472 Msa0786330:CDS 25.0%
! TATATCAGTTATCTCTTTGA+TGG + chr5_2:71772145-71772164 Msa0786330:intron 25.0%
! GAACAATACCATATCTTAAA+TGG + chr5_2:71772176-71772195 Msa0786330:intron 25.0%
! TATACAGTGATAATATGTGT+TGG + chr5_2:71772355-71772374 Msa0786330:intron 25.0%
! CCTTCATTTAACAAATTCTT+AGG - chr5_2:71772413-71772432 None:intergenic 25.0%
!!! CCTAAGAATTTGTTAAATGA+AGG + chr5_2:71772410-71772429 Msa0786330:intron 25.0%
! AGTGTAGATCAAAATATCTT+AGG + chr5_2:71772471-71772490 Msa0786330:intron 25.0%
! GTGTAGATCAAAATATCTTA+GGG + chr5_2:71772472-71772491 Msa0786330:intron 25.0%
! TGTAGATCAAAATATCTTAG+GGG + chr5_2:71772473-71772492 Msa0786330:intron 25.0%
! CATAGTAATTCTTTGGTTAT+CGG - chr5_2:71772525-71772544 None:intergenic 25.0%
! TGAAACTAATAACATTATGC+AGG + chr5_2:71772650-71772669 Msa0786330:intron 25.0%
! GAACATAACAACTCTATTAA+AGG + chr5_2:71772740-71772759 Msa0786330:CDS 25.0%
!! TAAGTTGTTACTTACAAGAT+TGG - chr5_2:71772799-71772818 None:intergenic 25.0%
! ATTGACAAATATGACCTATA+TGG + chr5_2:71772974-71772993 Msa0786330:CDS 25.0%
!!! ACTAGTTTGATATTTTTCTC+AGG + chr5_2:71773134-71773153 Msa0786330:intron 25.0%
!! CTAGTTTGATATTTTTCTCA+GGG + chr5_2:71773135-71773154 Msa0786330:intron 25.0%
! TCAATTAAAGTAAGACCAAA+AGG - chr5_2:71773189-71773208 None:intergenic 25.0%
!!! TTTTGGTCTTACTTTAATTG+AGG + chr5_2:71773188-71773207 Msa0786330:CDS 25.0%
!! TTTTCACTAACTTACCAATT+TGG + chr5_2:71773215-71773234 Msa0786330:intron 25.0%
! CATTCAAATTCTGAATACTA+TGG - chr5_2:71774748-71774767 None:intergenic 25.0%
! TTCAATTTCCATTCTATACT+TGG - chr5_2:71775135-71775154 None:intergenic 25.0%
!!! TTTTTTGTGAAGTAGTTTAC+TGG + chr5_2:71775253-71775272 Msa0786330:three_prime_UTR 25.0%
! CGATGTATATTGCTCATTTT+TGG - chr5_2:71769736-71769755 None:intergenic 30.0%
! TCTTTATGTAATGATGGGAA+GGG - chr5_2:71769798-71769817 None:intergenic 30.0%
! ATCTTTATGTAATGATGGGA+AGG - chr5_2:71769799-71769818 None:intergenic 30.0%
GGCTTATCTTTATGTAATGA+TGG - chr5_2:71769804-71769823 None:intergenic 30.0%
! TCTTCAACAAAGTACTTTGT+TGG - chr5_2:71770057-71770076 None:intergenic 30.0%
!! AACACTTGATTTGTTTGGAT+TGG + chr5_2:71770407-71770426 Msa0786330:intron 30.0%
GGCAATTTATTCTACGAATT+TGG + chr5_2:71770428-71770447 Msa0786330:intron 30.0%
! AAACTACTAGAGTACTAATG+AGG + chr5_2:71770453-71770472 Msa0786330:intron 30.0%
TACTAATGAGGCATATTTGT+AGG + chr5_2:71770465-71770484 Msa0786330:intron 30.0%
GCTATTTGCAATTGTTATCA+TGG + chr5_2:71770841-71770860 Msa0786330:intron 30.0%
TTTATACAGTTTGCATGGAT+TGG + chr5_2:71771119-71771138 Msa0786330:intron 30.0%
CAATATCAGGAGATGATATT+TGG - chr5_2:71771344-71771363 None:intergenic 30.0%
TATCATCTCCTGATATTGAT+TGG + chr5_2:71771346-71771365 Msa0786330:CDS 30.0%
TCTACAAATTCTTGAATGTG+AGG - chr5_2:71771516-71771535 None:intergenic 30.0%
CACATTCAAGAATTTGTAGA+TGG + chr5_2:71771516-71771535 Msa0786330:CDS 30.0%
! TCTCAACATGTCAAAAGTAT+TGG + chr5_2:71771554-71771573 Msa0786330:CDS 30.0%
!! CTCAACATGTCAAAAGTATT+GGG + chr5_2:71771555-71771574 Msa0786330:CDS 30.0%
CAACGTATAAGATAATGAGA+AGG + chr5_2:71771769-71771788 Msa0786330:CDS 30.0%
! TAGGTCTTCAAACTTGATTT+TGG + chr5_2:71772099-71772118 Msa0786330:intron 30.0%
! CGGAAATTCCATTTAAGATA+TGG - chr5_2:71772187-71772206 None:intergenic 30.0%
TGTGTGACATAGTAATTCTT+TGG - chr5_2:71772532-71772551 None:intergenic 30.0%
ACTAATAGTTCAAAGTTTGG+AGG + chr5_2:71772581-71772600 Msa0786330:intron 30.0%
TCAAGTCAATAACAGTACTA+AGG - chr5_2:71772633-71772652 None:intergenic 30.0%
CTTGATAAGGCTAATATCAT+AGG - chr5_2:71772705-71772724 None:intergenic 30.0%
!! CTATGATATTAGCCTTATCA+AGG + chr5_2:71772703-71772722 Msa0786330:CDS 30.0%
AGAGTTGTTATGTTCTTCTT+TGG - chr5_2:71772735-71772754 None:intergenic 30.0%
! ACAACTCTATTAAAGGCTTT+TGG + chr5_2:71772747-71772766 Msa0786330:CDS 30.0%
! ATCATATTTTCCAACAAGTG+TGG - chr5_2:71772836-71772855 None:intergenic 30.0%
TTCTAAACAGACCCTTATAA+TGG + chr5_2:71772883-71772902 Msa0786330:intron 30.0%
TCTAAACAGACCCTTATAAT+GGG + chr5_2:71772884-71772903 Msa0786330:intron 30.0%
ATCTCTGTTTCCCATTATAA+GGG - chr5_2:71772897-71772916 None:intergenic 30.0%
ACATAGAAGATATGTCTTCT+GGG + chr5_2:71772918-71772937 Msa0786330:CDS 30.0%
CAGATTGTCTATGATGTTTA+GGG - chr5_2:71773012-71773031 None:intergenic 30.0%
TCAGATTGTCTATGATGTTT+AGG - chr5_2:71773013-71773032 None:intergenic 30.0%
!! TAGATTTGCTGCTAAAACAA+AGG + chr5_2:71773048-71773067 Msa0786330:CDS 30.0%
TTTCATAAATCCTGCTTTAG+TGG + chr5_2:71773161-71773180 Msa0786330:CDS 30.0%
ATGTGAATATGTCACCAAAT+TGG - chr5_2:71773232-71773251 None:intergenic 30.0%
AAATGTGTTTAAACTCACTC+AGG + chr5_2:71773272-71773291 Msa0786330:intron 30.0%
TGTTATCAGAGAAAAACCTA+TGG + chr5_2:71773533-71773552 Msa0786330:CDS 30.0%
GTCTTTCAATGATTCACTTA+AGG + chr5_2:71773705-71773724 Msa0786330:CDS 30.0%
CAAACAAATACCCTCTATTA+AGG + chr5_2:71773881-71773900 Msa0786330:CDS 30.0%
CTTGATTCCTATGAAAGTAA+TGG + chr5_2:71773931-71773950 Msa0786330:CDS 30.0%
TATGACAATGCAAGAAACAA+CGG + chr5_2:71774056-71774075 Msa0786330:CDS 30.0%
TTCATTCACTTGAACATTTC+CGG - chr5_2:71774094-71774113 None:intergenic 30.0%
! ATGCTATAGTTTGTAGTAGT+GGG + chr5_2:71774118-71774137 Msa0786330:CDS 30.0%
TTTGCCTGATCAAGATTATT+CGG + chr5_2:71774185-71774204 Msa0786330:CDS 30.0%
GGTACATATAGATTATCGTT+GGG + chr5_2:71774206-71774225 Msa0786330:CDS 30.0%
GTACATATAGATTATCGTTG+GGG + chr5_2:71774207-71774226 Msa0786330:CDS 30.0%
CAAAATAAATGATCCTAGCA+AGG + chr5_2:71774356-71774375 Msa0786330:CDS 30.0%
TAAATTTCACTTACCTTGCT+AGG - chr5_2:71774372-71774391 None:intergenic 30.0%
!!! TTACAGCATGTTTTGATTCA+CGG - chr5_2:71774491-71774510 None:intergenic 30.0%
!! TAAATTGTTCGTTTTAGGCA+AGG + chr5_2:71774539-71774558 Msa0786330:intron 30.0%
TTGCAACATTTAATCTCCAA+CGG - chr5_2:71774804-71774823 None:intergenic 30.0%
CACAAGACTATAATCATGAA+AGG + chr5_2:71774886-71774905 Msa0786330:CDS 30.0%
TTGAAGCAACTTTCAAAATC+TGG + chr5_2:71775039-71775058 Msa0786330:CDS 30.0%
TTACCTTTCCAAGTATAGAA+TGG + chr5_2:71775124-71775143 Msa0786330:three_prime_UTR 30.0%
TTTCCATTCTATACTTGGAA+AGG - chr5_2:71775130-71775149 None:intergenic 30.0%
TGAATTAAGTCAAAATGCTC+CGG + chr5_2:71775185-71775204 Msa0786330:three_prime_UTR 30.0%
ATTGAGAGCAAGCAAAAATA+CGG - chr5_2:71775212-71775231 None:intergenic 30.0%
TATACATCGTTCATTGCATG+TGG + chr5_2:71769747-71769766 Msa0786330:five_prime_UTR 35.0%
TGAATGTTACATGATCGACA+TGG - chr5_2:71769825-71769844 None:intergenic 35.0%
GAAAGTTTGTGATTAATGGC+TGG + chr5_2:71769910-71769929 Msa0786330:exon 35.0%
ATTGTGTAGAGTTCAAGCTT+TGG - chr5_2:71770367-71770386 None:intergenic 35.0%
!! GCTCAAACACTTGATTTGTT+TGG + chr5_2:71770402-71770421 Msa0786330:intron 35.0%
TAATGAGGCATATTTGTAGG+TGG + chr5_2:71770468-71770487 Msa0786330:intron 35.0%
AAAGGTTAGCATACAGAAGA+TGG + chr5_2:71770506-71770525 Msa0786330:CDS 35.0%
AAGGTTAGCATACAGAAGAT+GGG + chr5_2:71770507-71770526 Msa0786330:CDS 35.0%
AGAAGATGGGAAATAGAACA+AGG + chr5_2:71770520-71770539 Msa0786330:CDS 35.0%
CTACACAGAAAAAACTTCAG+AGG + chr5_2:71770629-71770648 Msa0786330:CDS 35.0%
TATCATCAGACCATATTTCC+TGG - chr5_2:71770666-71770685 None:intergenic 35.0%
ACCATACGTGTTTATTGTAC+AGG + chr5_2:71770772-71770791 Msa0786330:intron 35.0%
ACACTTGTGAAACTCTTTGA+AGG - chr5_2:71770929-71770948 None:intergenic 35.0%
TGCAAACTGTATAAAAGCCA+AGG - chr5_2:71771114-71771133 None:intergenic 35.0%
! TGGCTTTTATACAGTTTGCA+TGG + chr5_2:71771114-71771133 Msa0786330:intron 35.0%
TAACTAAATGAGAGGGACAA+AGG - chr5_2:71771223-71771242 None:intergenic 35.0%
TCATCCTCATCATTATCATC+TGG - chr5_2:71771408-71771427 None:intergenic 35.0%
ATCTCGAGAAAGAACTTCTT+TGG + chr5_2:71771490-71771509 Msa0786330:CDS 35.0%
!! AAAGTATTGGGTGAACAAGT+TGG + chr5_2:71771567-71771586 Msa0786330:CDS 35.0%
AACTTGTCATCACTAGTACA+AGG + chr5_2:71771826-71771845 Msa0786330:CDS 35.0%
GCAAGAAATTGACGAACAAT+GGG + chr5_2:71771848-71771867 Msa0786330:CDS 35.0%
CAAGAAATTGACGAACAATG+GGG + chr5_2:71771849-71771868 Msa0786330:CDS 35.0%
AACAATGGGGACTTTATGAT+GGG + chr5_2:71771862-71771881 Msa0786330:CDS 35.0%
ATCTTAAATGGAATTTCCGC+AGG + chr5_2:71772188-71772207 Msa0786330:intron 35.0%
AATGTCGTGATACAAGAAGA+TGG + chr5_2:71772237-71772256 Msa0786330:CDS 35.0%
! CAAATTGAAGGTAACGCTTT+TGG - chr5_2:71772318-71772337 None:intergenic 35.0%
!! CAAAAGCGTTACCTTCAATT+TGG + chr5_2:71772316-71772335 Msa0786330:CDS 35.0%
CTCACTTCTAACCAAATTGA+AGG - chr5_2:71772330-71772349 None:intergenic 35.0%
ATGTGATCATATATGCCTCA+AGG + chr5_2:71772443-71772462 Msa0786330:intron 35.0%
GTTATGTTCTTCTTTGGATC+TGG - chr5_2:71772729-71772748 None:intergenic 35.0%
! AAGATTGGCAAGTTTTCTCA+AGG - chr5_2:71772784-71772803 None:intergenic 35.0%
AATTCAATTGCCACACTTGT+TGG + chr5_2:71772823-71772842 Msa0786330:intron 35.0%
CATCTCTGTTTCCCATTATA+AGG - chr5_2:71772898-71772917 None:intergenic 35.0%
GACATAGAAGATATGTCTTC+TGG + chr5_2:71772917-71772936 Msa0786330:CDS 35.0%
GCAGCAAATCTATATATCTC+AGG - chr5_2:71773040-71773059 None:intergenic 35.0%
TATCAAACTAGTTAGTTGGC+TGG - chr5_2:71773126-71773145 None:intergenic 35.0%
ATTACCCGATTAATGTCAAC+CGG - chr5_2:71773342-71773361 None:intergenic 35.0%
TGAGTTACAATGTGCATACT+AGG + chr5_2:71773390-71773409 Msa0786330:intron 35.0%
! AGAATATACACCTTTTCTCG+TGG + chr5_2:71773581-71773600 Msa0786330:CDS 35.0%
AACGTGTCTTAAGCAAGATA+AGG + chr5_2:71773809-71773828 Msa0786330:CDS 35.0%
AAGATAAGGAAGCAAGATTC+TGG + chr5_2:71773823-71773842 Msa0786330:CDS 35.0%
AGGATCTCCATTACTTTCAT+AGG - chr5_2:71773941-71773960 None:intergenic 35.0%
ATCGCAATCAACTTCTTATC+AGG - chr5_2:71773961-71773980 None:intergenic 35.0%
AGTTGATTGCGATAGTTCAA+AGG + chr5_2:71773968-71773987 Msa0786330:CDS 35.0%
! GATGCTATAGTTTGTAGTAG+TGG + chr5_2:71774117-71774136 Msa0786330:CDS 35.0%
TGTACCGAATAATCTTGATC+AGG - chr5_2:71774192-71774211 None:intergenic 35.0%
CGGTACATATAGATTATCGT+TGG + chr5_2:71774205-71774224 Msa0786330:CDS 35.0%
AAACTTATGAATGCCTCTAC+TGG + chr5_2:71774258-71774277 Msa0786330:CDS 35.0%
! TAATCTGTGTCGGTATGAAA+AGG - chr5_2:71774401-71774420 None:intergenic 35.0%
! TAAGTGCATGGTTGGTATTA+CGG + chr5_2:71774419-71774438 Msa0786330:intron 35.0%
GCAAACATGTATGTCATTCT+TGG + chr5_2:71774820-71774839 Msa0786330:CDS 35.0%
TATGTCATTCTTGGAGAAAC+CGG + chr5_2:71774829-71774848 Msa0786330:CDS 35.0%
GATTACGAGGAAATGATTTC+TGG + chr5_2:71774859-71774878 Msa0786330:CDS 35.0%
ATGAAAGGAGTTGTGTCTAA+GGG + chr5_2:71774901-71774920 Msa0786330:CDS 35.0%
ATGCATTAGTGAAACAACAG+AGG + chr5_2:71774999-71775018 Msa0786330:CDS 35.0%
TGAAAGTTGCTTCAAAGCAT+TGG - chr5_2:71775034-71775053 None:intergenic 35.0%
AAGCAACTTTCAAAATCTGG+AGG + chr5_2:71775042-71775061 Msa0786330:CDS 35.0%
GAATTAAGTCAAAATGCTCC+GGG + chr5_2:71775186-71775205 Msa0786330:three_prime_UTR 35.0%
! GATTAATGGCTGGTAATGAG+TGG + chr5_2:71769920-71769939 Msa0786330:exon 40.0%
!! GCTGGTAATGAGTGGATTAA+TGG + chr5_2:71769928-71769947 Msa0786330:CDS 40.0%
AGTCTGATCTTCATCGTACA+TGG + chr5_2:71770097-71770116 Msa0786330:CDS 40.0%
TCTTCATCGTACATGGCTTA+AGG + chr5_2:71770104-71770123 Msa0786330:CDS 40.0%
TTGTTGCCACTCGTAATACA+AGG + chr5_2:71770127-71770146 Msa0786330:CDS 40.0%
TGTTGCCACTCGTAATACAA+GGG + chr5_2:71770128-71770147 Msa0786330:CDS 40.0%
! AGAACATGTGTTGGCGTATT+TGG + chr5_2:71770169-71770188 Msa0786330:CDS 40.0%
TGGAAGGAGAAGAACTTCAA+AGG + chr5_2:71770488-71770507 Msa0786330:CDS 40.0%
GGAAATAGAACAAGGACGAA+GGG + chr5_2:71770528-71770547 Msa0786330:CDS 40.0%
TTCTCCTTCTGACAACTCTT+CGG - chr5_2:71770572-71770591 None:intergenic 40.0%
AGAGTTGTCAGAAGGAGAAA+AGG + chr5_2:71770573-71770592 Msa0786330:CDS 40.0%
GAGTTGTCAGAAGGAGAAAA+GGG + chr5_2:71770574-71770593 Msa0786330:CDS 40.0%
ATGCTTCTAGCCAGGAAATA+TGG + chr5_2:71770653-71770672 Msa0786330:CDS 40.0%
GCCTGTACAATAAACACGTA+TGG - chr5_2:71770776-71770795 None:intergenic 40.0%
ACTGTATAAAAGCCAAGGTC+AGG - chr5_2:71771109-71771128 None:intergenic 40.0%
ATTGGTACGAGGAGAAAACA+TGG + chr5_2:71771137-71771156 Msa0786330:CDS 40.0%
CTTGGTAGAGATTCTGATAC+TGG + chr5_2:71771162-71771181 Msa0786330:CDS 40.0%
CCATAGCTCCAATCAATATC+AGG - chr5_2:71771357-71771376 None:intergenic 40.0%
! CCTGATATTGATTGGAGCTA+TGG + chr5_2:71771354-71771373 Msa0786330:CDS 40.0%
! AGGTCCAGATGATAATGATG+AGG + chr5_2:71771401-71771420 Msa0786330:CDS 40.0%
AATGATGAGGATGATAGCAC+TGG + chr5_2:71771414-71771433 Msa0786330:CDS 40.0%
TTCTCGAGATATTTATCGCG+CGG - chr5_2:71771480-71771499 None:intergenic 40.0%
CATGTTGAGAATGTGAGCTA+AGG - chr5_2:71771544-71771563 None:intergenic 40.0%
TAGTGTCCATGAATCACGTA+AGG - chr5_2:71771612-71771631 None:intergenic 40.0%
TCGAACAACTGCTTAAGCAA+GGG + chr5_2:71771721-71771740 Msa0786330:CDS 40.0%
GGCAAGAAATTGACGAACAA+TGG + chr5_2:71771847-71771866 Msa0786330:CDS 40.0%
GAACAATGGGGACTTTATGA+TGG + chr5_2:71771861-71771880 Msa0786330:CDS 40.0%
GATCTACACTCAAAACCTTG+AGG - chr5_2:71772461-71772480 None:intergenic 40.0%
GCTAATATCATAGGCTTGTG+AGG - chr5_2:71772696-71772715 None:intergenic 40.0%
TAATGTTAGGCCCTCAACAA+TGG + chr5_2:71773457-71773476 Msa0786330:intron 40.0%
CACAAGCAAACCATTGTTGA+GGG - chr5_2:71773470-71773489 None:intergenic 40.0%
! GCAATTGCTTGATGATCATG+AGG - chr5_2:71773496-71773515 None:intergenic 40.0%
ATGAGTGCAGAAACAATGGT+TGG + chr5_2:71773557-71773576 Msa0786330:CDS 40.0%
AAATAAGTTCGGCAGTGTTC+AGG - chr5_2:71773607-71773626 None:intergenic 40.0%
! GTAGTAGTAGTTTGCCATTG+TGG - chr5_2:71773661-71773680 None:intergenic 40.0%
ACCATCAATTGAAAGCCTGA+GGG - chr5_2:71773746-71773765 None:intergenic 40.0%
TGCTTAAGACACGTTTCACT+TGG - chr5_2:71773804-71773823 None:intergenic 40.0%
AATACCCTCTATTAAGGCGA+AGG + chr5_2:71773887-71773906 Msa0786330:CDS 40.0%
!! ACAACGGAATTTCTAGCATC+CGG + chr5_2:71774072-71774091 Msa0786330:CDS 40.0%
! ATTAGTCTCTTCACCAGTAG+AGG - chr5_2:71774274-71774293 None:intergenic 40.0%
TCTACTGGTGAAGAGACTAA+TGG + chr5_2:71774273-71774292 Msa0786330:CDS 40.0%
GACTTCAAATCTTCCTCAAG+AGG - chr5_2:71774312-71774331 None:intergenic 40.0%
ACCATGCACTTAATCTGTGT+CGG - chr5_2:71774411-71774430 None:intergenic 40.0%
ACACAGATTAAGTGCATGGT+TGG + chr5_2:71774411-71774430 Msa0786330:intron 40.0%
GTGCATTTGCCAAATCAAGA+TGG + chr5_2:71774441-71774460 Msa0786330:intron 40.0%
!! TTGTTCGTTTTAGGCAAGGA+AGG + chr5_2:71774543-71774562 Msa0786330:intron 40.0%
ATGACTTGAGGCAAAAGCTT+CGG + chr5_2:71774569-71774588 Msa0786330:CDS 40.0%
TTGTCATCCTATGTACTGCA+GGG + chr5_2:71774606-71774625 Msa0786330:CDS 40.0%
TTAGGTATTTGTTCGTCCGT+TGG + chr5_2:71774785-71774804 Msa0786330:intron 40.0%
ATGTCATTCTTGGAGAAACC+GGG + chr5_2:71774830-71774849 Msa0786330:CDS 40.0%
CATGAAAGGAGTTGTGTCTA+AGG + chr5_2:71774900-71774919 Msa0786330:CDS 40.0%
TTGGCACAACATCATCTCTT+TGG - chr5_2:71774960-71774979 None:intergenic 40.0%
TCACTAATGCATGCAACAAG+AGG - chr5_2:71774991-71775010 None:intergenic 40.0%
! GTGGATTAATGGCTACCTTG+AGG + chr5_2:71769939-71769958 Msa0786330:CDS 45.0%
CTTGAGGCTATACTATCGAC+CGG + chr5_2:71769955-71769974 Msa0786330:CDS 45.0%
AACCCTTTGCTGCTCTTCAA+CGG - chr5_2:71769998-71770017 None:intergenic 45.0%
ACGTTCCCTTGTATTACGAG+TGG - chr5_2:71770136-71770155 None:intergenic 45.0%
CAAGACTCGAGAACATGTGT+TGG + chr5_2:71770160-71770179 Msa0786330:CDS 45.0%
TCTTGCTCGCAAGAAGAAGA+AGG + chr5_2:71770194-71770213 Msa0786330:CDS 45.0%
GAGGCATATTTGTAGGTGGA+AGG + chr5_2:71770472-71770491 Msa0786330:intron 45.0%
GGGAAATAGAACAAGGACGA+AGG + chr5_2:71770527-71770546 Msa0786330:CDS 45.0%
CAACTCTTCGGACAATTCCT+CGG - chr5_2:71770560-71770579 None:intergenic 45.0%
TTGTCCGAAGAGTTGTCAGA+AGG + chr5_2:71770565-71770584 Msa0786330:CDS 45.0%
TCAGAAGGAGAAAAGGGAGA+TGG + chr5_2:71770580-71770599 Msa0786330:CDS 45.0%
GAGAAAAGGGAGATGGCATT+GGG + chr5_2:71770587-71770606 Msa0786330:CDS 45.0%
AGAAAAGGGAGATGGCATTG+GGG + chr5_2:71770588-71770607 Msa0786330:CDS 45.0%
GCAATGTTTGATCCTGACCT+TGG + chr5_2:71771094-71771113 Msa0786330:intron 45.0%
!! AGTTTGCATGGATTGGTACG+AGG + chr5_2:71771126-71771145 Msa0786330:intron 45.0%
GGTAGAGATTCTGATACTGG+AGG + chr5_2:71771165-71771184 Msa0786330:CDS 45.0%
AGATTCTGATACTGGAGGAC+AGG + chr5_2:71771170-71771189 Msa0786330:CDS 45.0%
CCTGCAGATAGCATTTCTGT+AGG - chr5_2:71771384-71771403 None:intergenic 45.0%
CCTACAGAAATGCTATCTGC+AGG + chr5_2:71771381-71771400 Msa0786330:CDS 45.0%
TATTTATCGCGCGGACCAAA+GGG - chr5_2:71771471-71771490 None:intergenic 45.0%
ATATTTATCGCGCGGACCAA+AGG - chr5_2:71771472-71771491 None:intergenic 45.0%
! GTATTGGGTGAACAAGTTGG+CGG + chr5_2:71771570-71771589 Msa0786330:CDS 45.0%
! TGACAGTGCTGCTCTTCTTT+CGG + chr5_2:71771644-71771663 Msa0786330:CDS 45.0%
AATGTGCCAATGGTTCTCAC+TGG + chr5_2:71771675-71771694 Msa0786330:CDS 45.0%
GAATGACCAGTGAGAACCAT+TGG - chr5_2:71771684-71771703 None:intergenic 45.0%
GTTCTCACTGGTCATTCACT+TGG + chr5_2:71771687-71771706 Msa0786330:CDS 45.0%
CTCGAACAACTGCTTAAGCA+AGG + chr5_2:71771720-71771739 Msa0786330:CDS 45.0%
! AGTTGATATCCTCCCACGAT+TGG - chr5_2:71771749-71771768 None:intergenic 45.0%
AGAAGCAGAAGAGCTTTCCT+TGG + chr5_2:71771794-71771813 Msa0786330:CDS 45.0%
TGGTCGTTACATGCCTAGAA+TGG + chr5_2:71771944-71771963 Msa0786330:CDS 45.0%
TCGTTACATGCCTAGAATGG+CGG + chr5_2:71771947-71771966 Msa0786330:CDS 45.0%
TGCATTCTTACCGCCATTCT+AGG - chr5_2:71771960-71771979 None:intergenic 45.0%
ACATTGCTGAAGTCCATACC+AGG - chr5_2:71772222-71772241 None:intergenic 45.0%
ACAACGAGCTAATGATCAGG+AGG - chr5_2:71772500-71772519 None:intergenic 45.0%
GCTACAACGAGCTAATGATC+AGG - chr5_2:71772503-71772522 None:intergenic 45.0%
!! CTTTGGATCTGGCCTTGATA+AGG - chr5_2:71772718-71772737 None:intergenic 45.0%
! GAAGATATGTCTTCTGGGAG+TGG + chr5_2:71772923-71772942 Msa0786330:CDS 45.0%
GGTATGCGACATGTCCATAT+AGG - chr5_2:71772991-71773010 None:intergenic 45.0%
CCAAAAGGTTCCACTAAAGC+AGG - chr5_2:71773174-71773193 None:intergenic 45.0%
! CCTGCTTTAGTGGAACCTTT+TGG + chr5_2:71773171-71773190 Msa0786330:CDS 45.0%
!!! CCATTTTTAGTGGCCACCAT+TGG - chr5_2:71773315-71773334 None:intergenic 45.0%
CCAATGGTGGCCACTAAAAA+TGG + chr5_2:71773312-71773331 Msa0786330:CDS 45.0%
ATGGTGGCCACTAAAAATGG+TGG + chr5_2:71773315-71773334 Msa0786330:CDS 45.0%
!! AACCGGTCCACCATTTTTAG+TGG - chr5_2:71773325-71773344 None:intergenic 45.0%
GTGGACCGGTTGACATTAAT+CGG + chr5_2:71773334-71773353 Msa0786330:CDS 45.0%
TGGACCGGTTGACATTAATC+GGG + chr5_2:71773335-71773354 Msa0786330:CDS 45.0%
CCACAAGCAAACCATTGTTG+AGG - chr5_2:71773471-71773490 None:intergenic 45.0%
!! CCTCAACAATGGTTTGCTTG+TGG + chr5_2:71773468-71773487 Msa0786330:CDS 45.0%
! TGTTTCTGCACTCATGCCAT+AGG - chr5_2:71773552-71773571 None:intergenic 45.0%
TGGCATGAGTGCAGAAACAA+TGG + chr5_2:71773553-71773572 Msa0786330:CDS 45.0%
CCACGCGTGTCAAATAAGTT+CGG - chr5_2:71773618-71773637 None:intergenic 45.0%
! GTAGAATGAGGCATCCACAA+TGG + chr5_2:71773644-71773663 Msa0786330:CDS 45.0%
ATGTTCAAGACATGTCCCTC+AGG + chr5_2:71773728-71773747 Msa0786330:CDS 45.0%
TCCCTCAGGCTTTCAATTGA+TGG + chr5_2:71773742-71773761 Msa0786330:CDS 45.0%
CACCATCAATTGAAAGCCTG+AGG - chr5_2:71773747-71773766 None:intergenic 45.0%
!! GGTGAATTTGCTGCATCAAG+CGG + chr5_2:71773763-71773782 Msa0786330:CDS 45.0%
CCGAAACTCTTGCAGTTTGA+GGG - chr5_2:71774017-71774036 None:intergenic 45.0%
CCCTCAAACTGCAAGAGTTT+CGG + chr5_2:71774014-71774033 Msa0786330:CDS 45.0%
CCTCAAACTGCAAGAGTTTC+GGG + chr5_2:71774015-71774034 Msa0786330:CDS 45.0%
GGGAGTGAAGTTTATTACCC+TGG + chr5_2:71774138-71774157 Msa0786330:CDS 45.0%
AACAGCAACTAGTCCTCTTG+AGG + chr5_2:71774296-71774315 Msa0786330:CDS 45.0%
ACCGACACAGATTAAGTGCA+TGG + chr5_2:71774407-71774426 Msa0786330:intron 45.0%
CACAGTGAGCCATCTTGATT+TGG - chr5_2:71774453-71774472 None:intergenic 45.0%
!! CAAGGAAGGTTGATGACTTG+AGG + chr5_2:71774557-71774576 Msa0786330:CDS 45.0%
GTTGTCATCCTATGTACTGC+AGG + chr5_2:71774605-71774624 Msa0786330:CDS 45.0%
TGTCATCCTATGTACTGCAG+GGG + chr5_2:71774607-71774626 Msa0786330:CDS 45.0%
!! TGAGCTCTAGATGCAAGAAG+AGG - chr5_2:71774655-71774674 None:intergenic 45.0%
! TCTTCTTGCATCTAGAGCTC+AGG + chr5_2:71774654-71774673 Msa0786330:CDS 45.0%
TGTCATTCTTGGAGAAACCG+GGG + chr5_2:71774831-71774850 Msa0786330:CDS 45.0%
GGTTCAGAAGAACTGCTTAG+AGG + chr5_2:71774922-71774941 Msa0786330:CDS 45.0%
! TCATCTCTTTGGTAGCTTCC+TGG - chr5_2:71774949-71774968 None:intergenic 45.0%
GCAACAAGAGGACTCTCATT+TGG - chr5_2:71774979-71774998 None:intergenic 45.0%
!!! TTCATTTTTTAAAATATATT+TGG - chr5_2:71772559-71772578 None:intergenic 5.0%
CGGTCGATAGTATAGCCTCA+AGG - chr5_2:71769957-71769976 None:intergenic 50.0%
CACCGTTGAAGAGCAGCAAA+GGG + chr5_2:71769993-71770012 Msa0786330:CDS 50.0%
TGAAGAGCAGCAAAGGGTTG+CGG + chr5_2:71769999-71770018 Msa0786330:CDS 50.0%
GGAGAAAAGGGAGATGGCAT+TGG + chr5_2:71770586-71770605 Msa0786330:CDS 50.0%
CGAGGAGAAAACATGGAGCT+TGG + chr5_2:71771144-71771163 Msa0786330:CDS 50.0%
TGCTCGTGCACTTGCGAAAA+CGG + chr5_2:71771287-71771306 Msa0786330:CDS 50.0%
! ATGATAGCACTGGAGAGAGC+AGG + chr5_2:71771424-71771443 Msa0786330:CDS 50.0%
! TGATAGCACTGGAGAGAGCA+GGG + chr5_2:71771425-71771444 Msa0786330:CDS 50.0%
TGAATCACGTAAGGCCACAC+AGG - chr5_2:71771603-71771622 None:intergenic 50.0%
! GTGTGGCCTTACGTGATTCA+TGG + chr5_2:71771603-71771622 Msa0786330:CDS 50.0%
CATGGACACTATGCTGATGC+TGG + chr5_2:71771621-71771640 Msa0786330:CDS 50.0%
! GACAGTGCTGCTCTTCTTTC+GGG + chr5_2:71771645-71771664 Msa0786330:CDS 50.0%
! GGGTGCTTTGAATGTGCCAA+TGG + chr5_2:71771665-71771684 Msa0786330:CDS 50.0%
GACAAGTTCTGCAGCATCCA+AGG - chr5_2:71771814-71771833 None:intergenic 50.0%
! AAGTTTTGCGTGCCCGTGAT+AGG + chr5_2:71771904-71771923 Msa0786330:CDS 50.0%
AATTGACGCCACGCCTATCA+CGG - chr5_2:71771920-71771939 None:intergenic 50.0%
ATACCAGGAGGGATAACCTG+CGG - chr5_2:71772207-71772226 None:intergenic 50.0%
TGCTGAAGTCCATACCAGGA+GGG - chr5_2:71772218-71772237 None:intergenic 50.0%
TTGCTGAAGTCCATACCAGG+AGG - chr5_2:71772219-71772238 None:intergenic 50.0%
!! AGAGATCTCCGTCGACTTCA+GGG - chr5_2:71772263-71772282 None:intergenic 50.0%
GGAGATCTCTCACAGCTTAC+TGG + chr5_2:71772273-71772292 Msa0786330:CDS 50.0%
GATCTCTCACAGCTTACTGG+TGG + chr5_2:71772276-71772295 Msa0786330:CDS 50.0%
TGTTGGAGCTCAAGTGTGAG+CGG + chr5_2:71772372-71772391 Msa0786330:intron 50.0%
!! GGCCACTAAAAATGGTGGAC+CGG + chr5_2:71773320-71773339 Msa0786330:CDS 50.0%
AGTGTTCAGGCCACGAGAAA+AGG - chr5_2:71773594-71773613 None:intergenic 50.0%
CCGAACTTATTTGACACGCG+TGG + chr5_2:71773615-71773634 Msa0786330:CDS 50.0%
!! GAATTTGCTGCATCAAGCGG+TGG + chr5_2:71773766-71773785 Msa0786330:CDS 50.0%
TGCGCCTTCGCCTTAATAGA+GGG - chr5_2:71773894-71773913 None:intergenic 50.0%
CCCGAAACTCTTGCAGTTTG+AGG - chr5_2:71774018-71774037 None:intergenic 50.0%
CGTCTTCTGTGTGAACACCA+GGG - chr5_2:71774158-71774177 None:intergenic 50.0%
CCTGGTGTTCACACAGAAGA+CGG + chr5_2:71774156-71774175 Msa0786330:CDS 50.0%
CTGGTGTTCACACAGAAGAC+GGG + chr5_2:71774157-71774176 Msa0786330:CDS 50.0%
!! GATTATCGTTGGGGCGTTGA+AGG + chr5_2:71774216-71774235 Msa0786330:CDS 50.0%
AGGCAAAAGCTTCGGATGAG+AGG + chr5_2:71774577-71774596 Msa0786330:CDS 50.0%
GTCATCCTATGTACTGCAGG+GGG + chr5_2:71774608-71774627 Msa0786330:CDS 50.0%
TTCCTCGTAATCAGTGTCCC+CGG - chr5_2:71774851-71774870 None:intergenic 50.0%
GAAGAACTGCTTAGAGGTCC+AGG + chr5_2:71774928-71774947 Msa0786330:CDS 50.0%
GAGCAAGCAAAAATACGGCC+CGG - chr5_2:71775207-71775226 None:intergenic 50.0%
GAGGCTATACTATCGACCGG+TGG + chr5_2:71769958-71769977 Msa0786330:CDS 55.0%
GCTATACTATCGACCGGTGG+TGG + chr5_2:71769961-71769980 Msa0786330:CDS 55.0%
CCTTTGCTGCTCTTCAACGG+TGG - chr5_2:71769995-71770014 None:intergenic 55.0%
CCACCGTTGAAGAGCAGCAA+AGG + chr5_2:71769992-71770011 Msa0786330:CDS 55.0%
! TCAGAGGCATGCTTCTAGCC+AGG + chr5_2:71770645-71770664 Msa0786330:CDS 55.0%
! GATAGCACTGGAGAGAGCAG+GGG + chr5_2:71771426-71771445 Msa0786330:CDS 55.0%
! TTGGGTGAACAAGTTGGCGG+TGG + chr5_2:71771573-71771592 Msa0786330:CDS 55.0%
!! TTAAGCAAGGGCGCCAATCG+TGG + chr5_2:71771733-71771752 Msa0786330:CDS 55.0%
!! TAAGCAAGGGCGCCAATCGT+GGG + chr5_2:71771734-71771753 Msa0786330:CDS 55.0%
ATTGACGCCACGCCTATCAC+GGG - chr5_2:71771919-71771938 None:intergenic 55.0%
AGGCGTGGCGTCAATTGTCA+TGG + chr5_2:71771924-71771943 Msa0786330:CDS 55.0%
TTTCCGCAGGTTATCCCTCC+TGG + chr5_2:71772201-71772220 Msa0786330:intron 55.0%
GCAGGTTATCCCTCCTGGTA+TGG + chr5_2:71772206-71772225 Msa0786330:intron 55.0%
GAAGATGGCCCTGAAGTCGA+CGG + chr5_2:71772252-71772271 Msa0786330:CDS 55.0%
!! GAGAGATCTCCGTCGACTTC+AGG - chr5_2:71772264-71772283 None:intergenic 55.0%
! CAGCTTACTGGTGGTGCTGA+TGG + chr5_2:71772285-71772304 Msa0786330:CDS 55.0%
! AGCTGCACATGGACTGCCAA+TGG + chr5_2:71773296-71773315 Msa0786330:CDS 55.0%
! TGCACATGGACTGCCAATGG+TGG + chr5_2:71773299-71773318 Msa0786330:CDS 55.0%
GCGTGGATGCGTGTAGAATG+AGG + chr5_2:71773632-71773651 Msa0786330:CDS 55.0%
CTGCGCCTTCGCCTTAATAG+AGG - chr5_2:71773895-71773914 None:intergenic 55.0%
! CTCTATTAAGGCGAAGGCGC+AGG + chr5_2:71773893-71773912 Msa0786330:CDS 55.0%
CCGTCTTCTGTGTGAACACC+AGG - chr5_2:71774159-71774178 None:intergenic 55.0%
GAAGACCCCCTGCAGTACAT+AGG - chr5_2:71774616-71774635 None:intergenic 55.0%
! CATCTAGAGCTCAGGCACTC+AGG + chr5_2:71774662-71774681 Msa0786330:CDS 55.0%
! AACCGGGGACACTGATTACG+AGG + chr5_2:71774846-71774865 Msa0786330:CDS 55.0%
AGAGGTCGGGGTTCGAACAT+CGG - chr5_2:71775317-71775336 None:intergenic 55.0%
!! GGTGGTAGAAGCACCACCAC+CGG - chr5_2:71769977-71769996 None:intergenic 60.0%
AGGACGAAGGGATGCAACCG+AGG + chr5_2:71770540-71770559 Msa0786330:CDS 60.0%
CGTGCACTTGCGAAAACGGC+AGG + chr5_2:71771291-71771310 Msa0786330:CDS 60.0%
TTGGCGGTGGACAACCTGTG+TGG + chr5_2:71771586-71771605 Msa0786330:CDS 60.0%
CTCACTCAGGCAGCTGCACA+TGG + chr5_2:71773285-71773304 Msa0786330:intron 60.0%
GCGGCTGCAGCGAGAGAAAG+TGG + chr5_2:71770018-71770037 Msa0786330:CDS 65.0%
TTGCGTGCCCGTGATAGGCG+TGG + chr5_2:71771909-71771928 Msa0786330:CDS 65.0%
!! GCAAGGGCGCCAATCGTGGG+AGG + chr5_2:71771737-71771756 Msa0786330:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 71769722 71775338 71769722 ID=Msa0786330;Name=Msa0786330
chr5_2 mRNA 71769722 71775338 71769722 ID=Msa0786330-mRNA-1;Parent=Msa0786330;Name=Msa0786330-mRNA-1;_AED=0.07;_eAED=0.07;_QI=203|1|1|1|1|1|12|267|1057
chr5_2 exon 71769722 71770215 71769722 ID=Msa0786330-mRNA-1:exon:21677;Parent=Msa0786330-mRNA-1
chr5_2 exon 71770487 71770719 71770487 ID=Msa0786330-mRNA-1:exon:21678;Parent=Msa0786330-mRNA-1
chr5_2 exon 71771128 71771191 71771128 ID=Msa0786330-mRNA-1:exon:21679;Parent=Msa0786330-mRNA-1
chr5_2 exon 71771267 71771968 71771267 ID=Msa0786330-mRNA-1:exon:21680;Parent=Msa0786330-mRNA-1
chr5_2 exon 71772210 71772344 71772210 ID=Msa0786330-mRNA-1:exon:21681;Parent=Msa0786330-mRNA-1
chr5_2 exon 71772672 71772803 71772672 ID=Msa0786330-mRNA-1:exon:21682;Parent=Msa0786330-mRNA-1
chr5_2 exon 71772893 71773069 71772893 ID=Msa0786330-mRNA-1:exon:21683;Parent=Msa0786330-mRNA-1
chr5_2 exon 71773156 71773209 71773156 ID=Msa0786330-mRNA-1:exon:21684;Parent=Msa0786330-mRNA-1
chr5_2 exon 71773294 71773356 71773294 ID=Msa0786330-mRNA-1:exon:21685;Parent=Msa0786330-mRNA-1
chr5_2 exon 71773466 71774377 71773466 ID=Msa0786330-mRNA-1:exon:21686;Parent=Msa0786330-mRNA-1
chr5_2 exon 71774556 71774683 71774556 ID=Msa0786330-mRNA-1:exon:21687;Parent=Msa0786330-mRNA-1
chr5_2 exon 71774789 71775338 71774789 ID=Msa0786330-mRNA-1:exon:21688;Parent=Msa0786330-mRNA-1
chr5_2 five_prime_UTR 71769722 71769924 71769722 ID=Msa0786330-mRNA-1:five_prime_utr;Parent=Msa0786330-mRNA-1
chr5_2 CDS 71769925 71770215 71769925 ID=Msa0786330-mRNA-1:cds;Parent=Msa0786330-mRNA-1
chr5_2 CDS 71770487 71770719 71770487 ID=Msa0786330-mRNA-1:cds;Parent=Msa0786330-mRNA-1
chr5_2 CDS 71771128 71771191 71771128 ID=Msa0786330-mRNA-1:cds;Parent=Msa0786330-mRNA-1
chr5_2 CDS 71771267 71771968 71771267 ID=Msa0786330-mRNA-1:cds;Parent=Msa0786330-mRNA-1
chr5_2 CDS 71772210 71772344 71772210 ID=Msa0786330-mRNA-1:cds;Parent=Msa0786330-mRNA-1
chr5_2 CDS 71772672 71772803 71772672 ID=Msa0786330-mRNA-1:cds;Parent=Msa0786330-mRNA-1
chr5_2 CDS 71772893 71773069 71772893 ID=Msa0786330-mRNA-1:cds;Parent=Msa0786330-mRNA-1
chr5_2 CDS 71773156 71773209 71773156 ID=Msa0786330-mRNA-1:cds;Parent=Msa0786330-mRNA-1
chr5_2 CDS 71773294 71773356 71773294 ID=Msa0786330-mRNA-1:cds;Parent=Msa0786330-mRNA-1
chr5_2 CDS 71773466 71774377 71773466 ID=Msa0786330-mRNA-1:cds;Parent=Msa0786330-mRNA-1
chr5_2 CDS 71774556 71774683 71774556 ID=Msa0786330-mRNA-1:cds;Parent=Msa0786330-mRNA-1
chr5_2 CDS 71774789 71775071 71774789 ID=Msa0786330-mRNA-1:cds;Parent=Msa0786330-mRNA-1
chr5_2 three_prime_UTR 71775072 71775338 71775072 ID=Msa0786330-mRNA-1:three_prime_utr;Parent=Msa0786330-mRNA-1
Gene Sequence

>Msa0786330

ATGGCTGGTAATGAGTGGATTAATGGCTACCTTGAGGCTATACTATCGACCGGTGGTGGTGCTTCTACCACCGTTGAAGAGCAGCAAAGGGTTGCGGCTGCAGCGAGAGAAAGTGGTGATCATTTCAATCCAACAAAGTACTTTGTTGAAGAAGTAGTGAGTGCTGTTGATGAGTCTGATCTTCATCGTACATGGCTTAAGGTTGTTGCCACTCGTAATACAAGGGAACGTAGCTCAAGACTCGAGAACATGTGTTGGCGTATTTGGCATCTTGCTCGCAAGAAGAAGAAGGTGGAAGGAGAAGAACTTCAAAGGTTAGCATACAGAAGATGGGAAATAGAACAAGGACGAAGGGATGCAACCGAGGAATTGTCCGAAGAGTTGTCAGAAGGAGAAAAGGGAGATGGCATTGGGGAGATAATACAAATTGAGACTACACAGAAAAAACTTCAGAGGCATGCTTCTAGCCAGGAAATATGGTCTGATGATAAAAAGGAAAAGAAACTTTATATTATCCTCTTAAGTTTGCATGGATTGGTACGAGGAGAAAACATGGAGCTTGGTAGAGATTCTGATACTGGAGGACAGATTAAATATGTGGTAGAACTTGCTCGTGCACTTGCGAAAACGGCAGGAGTATATAGAGTAGATCTCTTCACGCGCCAAATATCATCTCCTGATATTGATTGGAGCTATGGAGAACCTACAGAAATGCTATCTGCAGGTCCAGATGATAATGATGAGGATGATAGCACTGGAGAGAGCAGGGGTGCATATATCATAAGAATACCCTTTGGTCCGCGCGATAAATATCTCGAGAAAGAACTTCTTTGGCCTCACATTCAAGAATTTGTAGATGGAGCCTTAGCTCACATTCTCAACATGTCAAAAGTATTGGGTGAACAAGTTGGCGGTGGACAACCTGTGTGGCCTTACGTGATTCATGGACACTATGCTGATGCTGGTGACAGTGCTGCTCTTCTTTCGGGTGCTTTGAATGTGCCAATGGTTCTCACTGGTCATTCACTTGGAAGAAACAAACTCGAACAACTGCTTAAGCAAGGGCGCCAATCGTGGGAGGATATCAACTCAACGTATAAGATAATGAGAAGGATAGAAGCAGAAGAGCTTTCCTTGGATGCTGCAGAACTTGTCATCACTAGTACAAGGCAAGAAATTGACGAACAATGGGGACTTTATGATGGGTTTGATGTCAAGCTTGAGAAAGTTTTGCGTGCCCGTGATAGGCGTGGCGTCAATTGTCATGGTCGTTACATGCCTAGAATGGCGGTTATCCCTCCTGGTATGGACTTCAGCAATGTCGTGATACAAGAAGATGGCCCTGAAGTCGACGGAGATCTCTCACAGCTTACTGGTGGTGCTGATGGATCTTCACCAAAAGCGTTACCTTCAATTTGGTTAGAAGTGATGCGTTTCTTCACAAATCCTCACAAGCCTATGATATTAGCCTTATCAAGGCCAGATCCAAAGAAGAACATAACAACTCTATTAAAGGCTTTTGGAGAAAATCGCTCCTTGAGAAAACTTGCCAATCTTACCCTTATAATGGGAAACAGAGATGACATAGAAGATATGTCTTCTGGGAGTGGCAGTGTTCTCACAACTGTGTTGAAACTGATTGACAAATATGACCTATATGGACATGTCGCATACCCTAAACATCATAGACAATCTGATGTACCTGAGATATATAGATTTGCTGCTAAAACAAAGGGAGTTTTCATAAATCCTGCTTTAGTGGAACCTTTTGGTCTTACTTTAATTGAGGCAGCTGCACATGGACTGCCAATGGTGGCCACTAAAAATGGTGGACCGGTTGACATTAATCGGGCCCTCAACAATGGTTTGCTTGTGGATCCTCATGATCATCAAGCAATTGCTGATGCATTACTCAAGTTGTTATCAGAGAAAAACCTATGGCATGAGTGCAGAAACAATGGTTGGAAGAATATACACCTTTTCTCGTGGCCTGAACACTGCCGAACTTATTTGACACGCGTGGATGCGTGTAGAATGAGGCATCCACAATGGCAAACTACTACTACTGAAGATGATGTAGATGTTGAAGAGTCTTTCAATGATTCACTTAAGGATGTTCAAGACATGTCCCTCAGGCTTTCAATTGATGGTGAATTTGCTGCATCAAGCGGTGGCAGTAACGAAGACCAAGTGAAACGTGTCTTAAGCAAGATAAGGAAGCAAGATTCTGGTTCAAATCATGAGAACATGTTGCTTGATAATGTATCAAACAAATACCCTCTATTAAGGCGAAGGCGCAGGTTGATTGTTATAGCACTTGATTCCTATGAAAGTAATGGAGATCCTGATAAGAAGTTGATTGCGATAGTTCAAAGGATAATTAAAGCTGTTCAATTAGACCCTCAAACTGCAAGAGTTTCGGGATTCGCTTTGCTGACTGCTATGACAATGCAAGAAACAACGGAATTTCTAGCATCCGGAAATGTTCAAGTGAATGAATTTGATGCTATAGTTTGTAGTAGTGGGAGTGAAGTTTATTACCCTGGTGTTCACACAGAAGACGGGAAGCTTTTGCCTGATCAAGATTATTCGGTACATATAGATTATCGTTGGGGCGTTGAAGGTTTAAAGAATACAATTTGTAAACTTATGAATGCCTCTACTGGTGAAGAGACTAATGGAACAGCAACTAGTCCTCTTGAGGAAGATTTGAAGTCTAGTAATGCACATTGCATTTCATACAAAATAAATGATCCTAGCAAGGCAAGGAAGGTTGATGACTTGAGGCAAAAGCTTCGGATGAGAGGTCTACGTTGTCATCCTATGTACTGCAGGGGGTCTTCTAGAATGCATGTTATTCCTCTTCTTGCATCTAGAGCTCAGGCACTCAGGTATTTGTTCGTCCGTTGGAGATTAAATGTTGCAAACATGTATGTCATTCTTGGAGAAACCGGGGACACTGATTACGAGGAAATGATTTCTGGAACACACAAGACTATAATCATGAAAGGAGTTGTGTCTAAGGGTTCAGAAGAACTGCTTAGAGGTCCAGGAAGCTACCAAAGAGATGATGTTGTGCCAAATGAGAGTCCTCTTGTTGCATGCATTAGTGAAACAACAGAGGAAAATATTGCCAATGCTTTGAAGCAACTTTCAAAATCTGGAGGAATATGA
Protein sequence

>Msa0786330

MAGNEWINGYLEAILSTGGGASTTVEEQQRVAAAARESGDHFNPTKYFVEEVVSAVDESDLHRTWLKVVATRNTRERSSRLENMCWRIWHLARKKKKVEGEELQRLAYRRWEIEQGRRDATEELSEELSEGEKGDGIGEIIQIETTQKKLQRHASSQEIWSDDKKEKKLYIILLSLHGLVRGENMELGRDSDTGGQIKYVVELARALAKTAGVYRVDLFTRQISSPDIDWSYGEPTEMLSAGPDDNDEDDSTGESRGAYIIRIPFGPRDKYLEKELLWPHIQEFVDGALAHILNMSKVLGEQVGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSWEDINSTYKIMRRIEAEELSLDAAELVITSTRQEIDEQWGLYDGFDVKLEKVLRARDRRGVNCHGRYMPRMAVIPPGMDFSNVVIQEDGPEVDGDLSQLTGGADGSSPKALPSIWLEVMRFFTNPHKPMILALSRPDPKKNITTLLKAFGENRSLRKLANLTLIMGNRDDIEDMSSGSGSVLTTVLKLIDKYDLYGHVAYPKHHRQSDVPEIYRFAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDINRALNNGLLVDPHDHQAIADALLKLLSEKNLWHECRNNGWKNIHLFSWPEHCRTYLTRVDACRMRHPQWQTTTTEDDVDVEESFNDSLKDVQDMSLRLSIDGEFAASSGGSNEDQVKRVLSKIRKQDSGSNHENMLLDNVSNKYPLLRRRRRLIVIALDSYESNGDPDKKLIAIVQRIIKAVQLDPQTARVSGFALLTAMTMQETTEFLASGNVQVNEFDAIVCSSGSEVYYPGVHTEDGKLLPDQDYSVHIDYRWGVEGLKNTICKLMNASTGEETNGTATSPLEEDLKSSNAHCISYKINDPSKARKVDDLRQKLRMRGLRCHPMYCRGSSRMHVIPLLASRAQALRYLFVRWRLNVANMYVILGETGDTDYEEMISGTHKTIIMKGVVSKGSEELLRGPGSYQRDDVVPNESPLVACISETTEENIANALKQLSKSGGI*