AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0220050


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0220050 MtrunA17_Chr2g0323371 100.000 133 0 0 1 133 1 133 9.76e-91 262
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0220050 AT4G03280.1 69.118 136 37 3 1 133 1 134 1.02e-41 138
Msa0220050 AT4G03280.2 74.107 112 26 2 25 133 4 115 1.17e-36 125

Find 50 sgRNAs with CRISPR-Local

Find 154 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCTTGAATCTTCTTCTTCT+TGG 0.209001 2_1:+68081115 Msa0220050:CDS
GCTGGAATGCTTGTTCCTTA+TGG 0.229044 2_1:+68081157 Msa0220050:CDS
TACTCTTACACAAGGATTAA+AGG 0.280573 2_1:+68082018 Msa0220050:CDS
CCAATCATCTGAGTCCTTGT+TGG 0.323325 2_1:-68081013 None:intergenic
GGAATTTCATGTCCTTCAAT+AGG 0.351220 2_1:+68080977 Msa0220050:CDS
GATACCTGAGAAGGGGTTGC+AGG 0.386192 2_1:-68080848 None:intergenic
GCTCTTTCACTTCCTACTGC+TGG 0.406855 2_1:+68081139 Msa0220050:CDS
GGATCCTTCCTTGTTCCACC+AGG 0.427870 2_1:+68081178 Msa0220050:CDS
ATCCCCTGCAACCCCTTCTC+AGG 0.428243 2_1:+68080844 Msa0220050:CDS
GTCTCTCTCTTACTCATGTC+AGG 0.452312 2_1:-68081094 None:intergenic
ACCAAGAAGAAGAAGATTCA+AGG 0.470226 2_1:-68081116 None:intergenic
AGCATCACTTGCCAGGCTAC+AGG 0.471775 2_1:+68081052 Msa0220050:CDS
TCAGATGATTGGTAAAGGTA+AGG 0.479300 2_1:+68081024 Msa0220050:CDS
GCAAGTGTACAATTGCAAAC+TGG 0.485320 2_1:+68082040 Msa0220050:CDS
GGGAATGAGCATCACTTGCC+AGG 0.491362 2_1:+68081045 Msa0220050:CDS
CAGCAGGAATGCCTGTAGCC+TGG 0.498499 2_1:-68081063 None:intergenic
TACAGCTCAGGTTCTTCCAC+TGG 0.509786 2_1:+68081917 Msa0220050:intron
AGGGGTTGCAGGGGATAGAG+TGG 0.510029 2_1:-68080837 None:intergenic
TTAATCCTTGTGTAAGAGTA+CGG 0.511377 2_1:-68082015 None:intergenic
TTGTGTAAGAGTACGGTCAC+CGG 0.527077 2_1:-68082008 None:intergenic
CCAACAAGGACTCAGATGAT+TGG 0.533278 2_1:+68081013 Msa0220050:CDS
TTCACAAGTAGTCCTATTGA+AGG 0.537717 2_1:-68080989 None:intergenic
CAGATGATTGGTAAAGGTAA+GGG 0.543592 2_1:+68081025 Msa0220050:CDS
CACTGGTGGTACTGTAGCAA+AGG 0.547649 2_1:+68081934 Msa0220050:CDS
GATCCTTCCTTGTTCCACCA+GGG 0.557310 2_1:+68081179 Msa0220050:CDS
ATACCTGAGAAGGGGTTGCA+GGG 0.561697 2_1:-68080847 None:intergenic
ATGTCAGGTACACGATCAGC+AGG 0.563729 2_1:-68081079 None:intergenic
CAGCTATGTTCTGGAAAGAG+TGG 0.564531 2_1:+68080956 Msa0220050:intron
GGATAGAGTGGTGGAAGACA+TGG 0.564996 2_1:-68080825 None:intergenic
ATGATGTAGTTGCAGCGGAA+TGG 0.567006 2_1:+68081969 Msa0220050:CDS
AGCTCAGGTTCTTCCACTGG+TGG 0.569111 2_1:+68081920 Msa0220050:intron
AGGACTCAGATGATTGGTAA+AGG 0.572119 2_1:+68081019 Msa0220050:CDS
TGTGTAAGAGTACGGTCACC+GGG 0.581349 2_1:-68082007 None:intergenic
TGGCTAAAGTCACATGGACC+CGG 0.583593 2_1:+68081989 Msa0220050:CDS
TAACTAACCCTGGTGGAACA+AGG 0.585258 2_1:-68081186 None:intergenic
ACTGTAGCAAAGGATGCCGT+TGG 0.586270 2_1:+68081944 Msa0220050:CDS
GGAACAAGGAAGGATCCATA+AGG 0.588651 2_1:-68081172 None:intergenic
GGAACAAGCATTCCAGCAGT+AGG 0.593273 2_1:-68081151 None:intergenic
TTTGCAATGATACCTGAGAA+GGG 0.603738 2_1:-68080856 None:intergenic
GACTACTTGTGAAGCCAACA+AGG 0.607551 2_1:+68080999 Msa0220050:CDS
TTGCAATGATACCTGAGAAG+GGG 0.608443 2_1:-68080855 None:intergenic
TGCAACTACATCATTGCCAA+CGG 0.609037 2_1:-68081960 None:intergenic
GGTTGCAGGGGATAGAGTGG+TGG 0.611449 2_1:-68080834 None:intergenic
TAACCCTGGTGGAACAAGGA+AGG 0.611521 2_1:-68081182 None:intergenic
TACCTGAGAAGGGGTTGCAG+GGG 0.643153 2_1:-68080846 None:intergenic
TGGCAATGATGTAGTTGCAG+CGG 0.645737 2_1:+68081964 Msa0220050:CDS
CTTTGCTACAGTACCACCAG+TGG 0.660969 2_1:-68081933 None:intergenic
GCGGAATGGCTAAAGTCACA+TGG 0.661778 2_1:+68081983 Msa0220050:CDS
AATAAAATAACTAACCCTGG+TGG 0.665632 2_1:-68081193 None:intergenic
GGTGACCGTACTCTTACACA+AGG 0.707111 2_1:+68082010 Msa0220050:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTTATTTATTTATTTT+TGG + chr2_1:68080930-68080949 Msa0220050:intron 0.0%
!!! TTTATTTATTTATTTATTTT+TGG + chr2_1:68080930-68080949 Msa0220050:intron 0.0%
!!! TTTTTTAATATCTAATCTAA+AGG + chr2_1:68080897-68080916 Msa0220050:intron 10.0%
!!! TTTTTAATATCTAATCTAAA+GGG + chr2_1:68080898-68080917 Msa0220050:intron 10.0%
!!! TTTTTTAATATCTAATCTAA+AGG + chr2_1:68080897-68080916 Msa0220050:intron 10.0%
!!! TTTTTAATATCTAATCTAAA+GGG + chr2_1:68080898-68080917 Msa0220050:intron 10.0%
!!! TTAAGGTTTTATTCTATATT+TGG + chr2_1:68081306-68081325 Msa0220050:intron 15.0%
!!! TTAAGGTTTTATTCTATATT+TGG + chr2_1:68081306-68081325 Msa0220050:intron 15.0%
!! ATAAATAAAATAACTAACCC+TGG - chr2_1:68081199-68081218 None:intergenic 20.0%
!!! TTAAAGCATCATAAAACATT+TGG - chr2_1:68081849-68081868 None:intergenic 20.0%
!! ATAAATAAAATAACTAACCC+TGG - chr2_1:68081199-68081218 None:intergenic 20.0%
!!! TTAAAGCATCATAAAACATT+TGG - chr2_1:68081849-68081868 None:intergenic 20.0%
!!! CATGTTTTTAGCTCAAATTA+AGG + chr2_1:68081289-68081308 Msa0220050:intron 25.0%
! AATCAAATGAAGTGTATGTT+TGG + chr2_1:68081386-68081405 Msa0220050:intron 25.0%
! TATGTAATGTTGTGTAGTAT+AGG + chr2_1:68081444-68081463 Msa0220050:intron 25.0%
! TATTTCTTGTGTTTACATGT+CGG - chr2_1:68081504-68081523 None:intergenic 25.0%
! GCAACATATATTTAGCAATA+TGG - chr2_1:68081817-68081836 None:intergenic 25.0%
!!! CATGTTTTTAGCTCAAATTA+AGG + chr2_1:68081289-68081308 Msa0220050:intron 25.0%
! AATCAAATGAAGTGTATGTT+TGG + chr2_1:68081386-68081405 Msa0220050:intron 25.0%
! TATGTAATGTTGTGTAGTAT+AGG + chr2_1:68081444-68081463 Msa0220050:intron 25.0%
! TATTTCTTGTGTTTACATGT+CGG - chr2_1:68081504-68081523 None:intergenic 25.0%
! GCAACATATATTTAGCAATA+TGG - chr2_1:68081817-68081836 None:intergenic 25.0%
AATAAAATAACTAACCCTGG+TGG - chr2_1:68081196-68081215 None:intergenic 30.0%
! CAATTTGAAATCGTGTTCAA+GGG - chr2_1:68081605-68081624 None:intergenic 30.0%
! TCAATTTGAAATCGTGTTCA+AGG - chr2_1:68081606-68081625 None:intergenic 30.0%
AGTGTATAGCAAATAACCAT+CGG + chr2_1:68081676-68081695 Msa0220050:intron 30.0%
GATACATGACTACATGAATT+AGG - chr2_1:68081726-68081745 None:intergenic 30.0%
ATCAAATCATTAACCAGTCT+CGG + chr2_1:68081886-68081905 Msa0220050:intron 30.0%
TTAATCCTTGTGTAAGAGTA+CGG - chr2_1:68082018-68082037 None:intergenic 30.0%
TACTCTTACACAAGGATTAA+AGG + chr2_1:68082018-68082037 Msa0220050:CDS 30.0%
AATAAAATAACTAACCCTGG+TGG - chr2_1:68081196-68081215 None:intergenic 30.0%
! CAATTTGAAATCGTGTTCAA+GGG - chr2_1:68081605-68081624 None:intergenic 30.0%
! TCAATTTGAAATCGTGTTCA+AGG - chr2_1:68081606-68081625 None:intergenic 30.0%
AGTGTATAGCAAATAACCAT+CGG + chr2_1:68081676-68081695 Msa0220050:intron 30.0%
GATACATGACTACATGAATT+AGG - chr2_1:68081726-68081745 None:intergenic 30.0%
ATCAAATCATTAACCAGTCT+CGG + chr2_1:68081886-68081905 Msa0220050:intron 30.0%
TTAATCCTTGTGTAAGAGTA+CGG - chr2_1:68082018-68082037 None:intergenic 30.0%
TACTCTTACACAAGGATTAA+AGG + chr2_1:68082018-68082037 Msa0220050:CDS 30.0%
TTTGCAATGATACCTGAGAA+GGG - chr2_1:68080859-68080878 None:intergenic 35.0%
! TTTTGCAATGATACCTGAGA+AGG - chr2_1:68080860-68080879 None:intergenic 35.0%
!!! TTTTGGTTTCAGCTATGTTC+TGG + chr2_1:68080947-68080966 Msa0220050:intron 35.0%
GGAATTTCATGTCCTTCAAT+AGG + chr2_1:68080977-68080996 Msa0220050:CDS 35.0%
TTCACAAGTAGTCCTATTGA+AGG - chr2_1:68080992-68081011 None:intergenic 35.0%
TCAGATGATTGGTAAAGGTA+AGG + chr2_1:68081024-68081043 Msa0220050:CDS 35.0%
CAGATGATTGGTAAAGGTAA+GGG + chr2_1:68081025-68081044 Msa0220050:CDS 35.0%
ACCTTGAATCTTCTTCTTCT+TGG + chr2_1:68081115-68081134 Msa0220050:CDS 35.0%
ACCAAGAAGAAGAAGATTCA+AGG - chr2_1:68081119-68081138 None:intergenic 35.0%
ACACAGACAATATACATGCA+CGG + chr2_1:68081475-68081494 Msa0220050:intron 35.0%
CATTATCTAGCAGACTAGTA+TGG - chr2_1:68081634-68081653 None:intergenic 35.0%
TCTTGTCTCATTAGCATCAA+AGG + chr2_1:68081758-68081777 Msa0220050:intron 35.0%
TTTGCAATGATACCTGAGAA+GGG - chr2_1:68080859-68080878 None:intergenic 35.0%
! TTTTGCAATGATACCTGAGA+AGG - chr2_1:68080860-68080879 None:intergenic 35.0%
!!! TTTTGGTTTCAGCTATGTTC+TGG + chr2_1:68080947-68080966 Msa0220050:intron 35.0%
GGAATTTCATGTCCTTCAAT+AGG + chr2_1:68080977-68080996 Msa0220050:CDS 35.0%
TTCACAAGTAGTCCTATTGA+AGG - chr2_1:68080992-68081011 None:intergenic 35.0%
TCAGATGATTGGTAAAGGTA+AGG + chr2_1:68081024-68081043 Msa0220050:CDS 35.0%
CAGATGATTGGTAAAGGTAA+GGG + chr2_1:68081025-68081044 Msa0220050:CDS 35.0%
ACCTTGAATCTTCTTCTTCT+TGG + chr2_1:68081115-68081134 Msa0220050:CDS 35.0%
ACCAAGAAGAAGAAGATTCA+AGG - chr2_1:68081119-68081138 None:intergenic 35.0%
ACACAGACAATATACATGCA+CGG + chr2_1:68081475-68081494 Msa0220050:intron 35.0%
CATTATCTAGCAGACTAGTA+TGG - chr2_1:68081634-68081653 None:intergenic 35.0%
TCTTGTCTCATTAGCATCAA+AGG + chr2_1:68081758-68081777 Msa0220050:intron 35.0%
TTGCAATGATACCTGAGAAG+GGG - chr2_1:68080858-68080877 None:intergenic 40.0%
AGGACTCAGATGATTGGTAA+AGG + chr2_1:68081019-68081038 Msa0220050:CDS 40.0%
CGACATAACTTCGATACATG+TGG - chr2_1:68081557-68081576 None:intergenic 40.0%
!! AGCAAATAACCATCGGCTTT+CGG + chr2_1:68081683-68081702 Msa0220050:intron 40.0%
GACTACATGAATTAGGTGCA+AGG - chr2_1:68081719-68081738 None:intergenic 40.0%
! CTGTAATTGTTTTCCGAGAC+TGG - chr2_1:68081902-68081921 None:intergenic 40.0%
TCGGAAAACAATTACAGCTC+AGG + chr2_1:68081905-68081924 Msa0220050:intron 40.0%
TGCAACTACATCATTGCCAA+CGG - chr2_1:68081963-68081982 None:intergenic 40.0%
GCAAGTGTACAATTGCAAAC+TGG + chr2_1:68082040-68082059 Msa0220050:CDS 40.0%
TTGCAATGATACCTGAGAAG+GGG - chr2_1:68080858-68080877 None:intergenic 40.0%
AGGACTCAGATGATTGGTAA+AGG + chr2_1:68081019-68081038 Msa0220050:CDS 40.0%
CGACATAACTTCGATACATG+TGG - chr2_1:68081557-68081576 None:intergenic 40.0%
!! AGCAAATAACCATCGGCTTT+CGG + chr2_1:68081683-68081702 Msa0220050:intron 40.0%
GACTACATGAATTAGGTGCA+AGG - chr2_1:68081719-68081738 None:intergenic 40.0%
! CTGTAATTGTTTTCCGAGAC+TGG - chr2_1:68081902-68081921 None:intergenic 40.0%
TCGGAAAACAATTACAGCTC+AGG + chr2_1:68081905-68081924 Msa0220050:intron 40.0%
TGCAACTACATCATTGCCAA+CGG - chr2_1:68081963-68081982 None:intergenic 40.0%
GCAAGTGTACAATTGCAAAC+TGG + chr2_1:68082040-68082059 Msa0220050:CDS 40.0%
!! CAGCTATGTTCTGGAAAGAG+TGG + chr2_1:68080956-68080975 Msa0220050:intron 45.0%
GACTACTTGTGAAGCCAACA+AGG + chr2_1:68080999-68081018 Msa0220050:CDS 45.0%
CCAATCATCTGAGTCCTTGT+TGG - chr2_1:68081016-68081035 None:intergenic 45.0%
CCAACAAGGACTCAGATGAT+TGG + chr2_1:68081013-68081032 Msa0220050:CDS 45.0%
GTCTCTCTCTTACTCATGTC+AGG - chr2_1:68081097-68081116 None:intergenic 45.0%
GCTGGAATGCTTGTTCCTTA+TGG + chr2_1:68081157-68081176 Msa0220050:CDS 45.0%
GGAACAAGGAAGGATCCATA+AGG - chr2_1:68081175-68081194 None:intergenic 45.0%
TAACTAACCCTGGTGGAACA+AGG - chr2_1:68081189-68081208 None:intergenic 45.0%
ATAGTACAACCGAAAGCCGA+TGG - chr2_1:68081695-68081714 None:intergenic 45.0%
TGGCAATGATGTAGTTGCAG+CGG + chr2_1:68081964-68081983 Msa0220050:CDS 45.0%
ATGATGTAGTTGCAGCGGAA+TGG + chr2_1:68081969-68081988 Msa0220050:CDS 45.0%
! TTGTGTAAGAGTACGGTCAC+CGG - chr2_1:68082011-68082030 None:intergenic 45.0%
!! CAGCTATGTTCTGGAAAGAG+TGG + chr2_1:68080956-68080975 Msa0220050:intron 45.0%
GACTACTTGTGAAGCCAACA+AGG + chr2_1:68080999-68081018 Msa0220050:CDS 45.0%
CCAATCATCTGAGTCCTTGT+TGG - chr2_1:68081016-68081035 None:intergenic 45.0%
CCAACAAGGACTCAGATGAT+TGG + chr2_1:68081013-68081032 Msa0220050:CDS 45.0%
GTCTCTCTCTTACTCATGTC+AGG - chr2_1:68081097-68081116 None:intergenic 45.0%
GCTGGAATGCTTGTTCCTTA+TGG + chr2_1:68081157-68081176 Msa0220050:CDS 45.0%
GGAACAAGGAAGGATCCATA+AGG - chr2_1:68081175-68081194 None:intergenic 45.0%
TAACTAACCCTGGTGGAACA+AGG - chr2_1:68081189-68081208 None:intergenic 45.0%
ATAGTACAACCGAAAGCCGA+TGG - chr2_1:68081695-68081714 None:intergenic 45.0%
TGGCAATGATGTAGTTGCAG+CGG + chr2_1:68081964-68081983 Msa0220050:CDS 45.0%
ATGATGTAGTTGCAGCGGAA+TGG + chr2_1:68081969-68081988 Msa0220050:CDS 45.0%
! TTGTGTAAGAGTACGGTCAC+CGG - chr2_1:68082011-68082030 None:intergenic 45.0%
ATACCTGAGAAGGGGTTGCA+GGG - chr2_1:68080850-68080869 None:intergenic 50.0%
ATGTCAGGTACACGATCAGC+AGG - chr2_1:68081082-68081101 None:intergenic 50.0%
GCTCTTTCACTTCCTACTGC+TGG + chr2_1:68081139-68081158 Msa0220050:CDS 50.0%
GGAACAAGCATTCCAGCAGT+AGG - chr2_1:68081154-68081173 None:intergenic 50.0%
GATCCTTCCTTGTTCCACCA+GGG + chr2_1:68081179-68081198 Msa0220050:CDS 50.0%
TAACCCTGGTGGAACAAGGA+AGG - chr2_1:68081185-68081204 None:intergenic 50.0%
ATCGTGTTCAAGGGCTCGAT+AGG - chr2_1:68081596-68081615 None:intergenic 50.0%
TACAGCTCAGGTTCTTCCAC+TGG + chr2_1:68081917-68081936 Msa0220050:intron 50.0%
CTTTGCTACAGTACCACCAG+TGG - chr2_1:68081936-68081955 None:intergenic 50.0%
CACTGGTGGTACTGTAGCAA+AGG + chr2_1:68081934-68081953 Msa0220050:CDS 50.0%
ACTGTAGCAAAGGATGCCGT+TGG + chr2_1:68081944-68081963 Msa0220050:CDS 50.0%
GCGGAATGGCTAAAGTCACA+TGG + chr2_1:68081983-68082002 Msa0220050:CDS 50.0%
TGGCTAAAGTCACATGGACC+CGG + chr2_1:68081989-68082008 Msa0220050:CDS 50.0%
! TGTGTAAGAGTACGGTCACC+GGG - chr2_1:68082010-68082029 None:intergenic 50.0%
GGTGACCGTACTCTTACACA+AGG + chr2_1:68082010-68082029 Msa0220050:CDS 50.0%
ATACCTGAGAAGGGGTTGCA+GGG - chr2_1:68080850-68080869 None:intergenic 50.0%
ATGTCAGGTACACGATCAGC+AGG - chr2_1:68081082-68081101 None:intergenic 50.0%
GCTCTTTCACTTCCTACTGC+TGG + chr2_1:68081139-68081158 Msa0220050:CDS 50.0%
GGAACAAGCATTCCAGCAGT+AGG - chr2_1:68081154-68081173 None:intergenic 50.0%
GATCCTTCCTTGTTCCACCA+GGG + chr2_1:68081179-68081198 Msa0220050:CDS 50.0%
TAACCCTGGTGGAACAAGGA+AGG - chr2_1:68081185-68081204 None:intergenic 50.0%
ATCGTGTTCAAGGGCTCGAT+AGG - chr2_1:68081596-68081615 None:intergenic 50.0%
TACAGCTCAGGTTCTTCCAC+TGG + chr2_1:68081917-68081936 Msa0220050:intron 50.0%
CTTTGCTACAGTACCACCAG+TGG - chr2_1:68081936-68081955 None:intergenic 50.0%
CACTGGTGGTACTGTAGCAA+AGG + chr2_1:68081934-68081953 Msa0220050:CDS 50.0%
ACTGTAGCAAAGGATGCCGT+TGG + chr2_1:68081944-68081963 Msa0220050:CDS 50.0%
GCGGAATGGCTAAAGTCACA+TGG + chr2_1:68081983-68082002 Msa0220050:CDS 50.0%
TGGCTAAAGTCACATGGACC+CGG + chr2_1:68081989-68082008 Msa0220050:CDS 50.0%
! TGTGTAAGAGTACGGTCACC+GGG - chr2_1:68082010-68082029 None:intergenic 50.0%
GGTGACCGTACTCTTACACA+AGG + chr2_1:68082010-68082029 Msa0220050:CDS 50.0%
TACCTGAGAAGGGGTTGCAG+GGG - chr2_1:68080849-68080868 None:intergenic 55.0%
GATACCTGAGAAGGGGTTGC+AGG - chr2_1:68080851-68080870 None:intergenic 55.0%
GGGAATGAGCATCACTTGCC+AGG + chr2_1:68081045-68081064 Msa0220050:CDS 55.0%
AGCATCACTTGCCAGGCTAC+AGG + chr2_1:68081052-68081071 Msa0220050:CDS 55.0%
GGATCCTTCCTTGTTCCACC+AGG + chr2_1:68081178-68081197 Msa0220050:CDS 55.0%
AGCTCAGGTTCTTCCACTGG+TGG + chr2_1:68081920-68081939 Msa0220050:intron 55.0%
TACCTGAGAAGGGGTTGCAG+GGG - chr2_1:68080849-68080868 None:intergenic 55.0%
GATACCTGAGAAGGGGTTGC+AGG - chr2_1:68080851-68080870 None:intergenic 55.0%
GGGAATGAGCATCACTTGCC+AGG + chr2_1:68081045-68081064 Msa0220050:CDS 55.0%
AGCATCACTTGCCAGGCTAC+AGG + chr2_1:68081052-68081071 Msa0220050:CDS 55.0%
GGATCCTTCCTTGTTCCACC+AGG + chr2_1:68081178-68081197 Msa0220050:CDS 55.0%
AGCTCAGGTTCTTCCACTGG+TGG + chr2_1:68081920-68081939 Msa0220050:intron 55.0%
GGTTGCAGGGGATAGAGTGG+TGG - chr2_1:68080837-68080856 None:intergenic 60.0%
AGGGGTTGCAGGGGATAGAG+TGG - chr2_1:68080840-68080859 None:intergenic 60.0%
ATCCCCTGCAACCCCTTCTC+AGG + chr2_1:68080844-68080863 Msa0220050:CDS 60.0%
CAGCAGGAATGCCTGTAGCC+TGG - chr2_1:68081066-68081085 None:intergenic 60.0%
GGTTGCAGGGGATAGAGTGG+TGG - chr2_1:68080837-68080856 None:intergenic 60.0%
AGGGGTTGCAGGGGATAGAG+TGG - chr2_1:68080840-68080859 None:intergenic 60.0%
ATCCCCTGCAACCCCTTCTC+AGG + chr2_1:68080844-68080863 Msa0220050:CDS 60.0%
CAGCAGGAATGCCTGTAGCC+TGG - chr2_1:68081066-68081085 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 68080827 68082066 68080827 ID=Msa0220050;Name=Msa0220050
chr2_1 mRNA 68080827 68082066 68080827 ID=Msa0220050-mRNA-1;Parent=Msa0220050;Name=Msa0220050-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0|0|1|1|1|3|0|141
chr2_1 exon 68080827 68080865 68080827 ID=Msa0220050-mRNA-1:exon:19254;Parent=Msa0220050-mRNA-1
chr2_1 exon 68080959 68081200 68080959 ID=Msa0220050-mRNA-1:exon:19255;Parent=Msa0220050-mRNA-1
chr2_1 exon 68081922 68082066 68081922 ID=Msa0220050-mRNA-1:exon:19256;Parent=Msa0220050-mRNA-1
chr2_1 CDS 68080827 68080865 68080827 ID=Msa0220050-mRNA-1:cds;Parent=Msa0220050-mRNA-1
chr2_1 CDS 68080959 68081200 68080959 ID=Msa0220050-mRNA-1:cds;Parent=Msa0220050-mRNA-1
chr2_1 CDS 68081922 68082066 68081922 ID=Msa0220050-mRNA-1:cds;Parent=Msa0220050-mRNA-1
Gene Sequence

>Msa0220050

ATGTCTTCCACCACTCTATCCCCTGCAACCCCTTCTCAGCTATGTTCTGGAAAGAGTGGAATTTCATGTCCTTCAATAGGACTACTTGTGAAGCCAACAAGGACTCAGATGATTGGTAAAGGTAAGGGAATGAGCATCACTTGCCAGGCTACAGGCATTCCTGCTGATCGTGTACCTGACATGAGTAAGAGAGAGACCTTGAATCTTCTTCTTCTTGGTGCTCTTTCACTTCCTACTGCTGGAATGCTTGTTCCTTATGGATCCTTCCTTGTTCCACCAGGCTCAGGTTCTTCCACTGGTGGTACTGTAGCAAAGGATGCCGTTGGCAATGATGTAGTTGCAGCGGAATGGCTAAAGTCACATGGACCCGGTGACCGTACTCTTACACAAGGATTAAAGGCAAGTGTACAATTGCAAACTGGTTAG

Protein sequence

>Msa0220050

MSSTTLSPATPSQLCSGKSGISCPSIGLLVKPTRTQMIGKGKGMSITCQATGIPADRVPDMSKRETLNLLLLGALSLPTAGMLVPYGSFLVPPGSGSSTGGTVAKDAVGNDVVAAEWLKSHGPGDRTLTQGLKASVQLQTG*