Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0775220 | sp|A7LXU3|BGH3B_BACO1 | 26.250 | 640 | 343 | 17 | 12 | 537 | 35 | 659 | 1.52e-54 | 200 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0775220 | A0A396HV70 | 85.424 | 590 | 35 | 1 | 1 | 539 | 1 | 590 | 0.0 | 1028 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007810 | Msa0775220 | -0.804300 | 2.308530e-49 | -8.615850e-47 |
| Msa0011060 | Msa0775220 | -0.811659 | 6.268384e-51 | -8.615850e-47 |
| Msa0011100 | Msa0775220 | -0.807614 | 4.637037e-50 | -8.615850e-47 |
| Msa0016380 | Msa0775220 | -0.810039 | 1.404865e-50 | -8.615850e-47 |
| Msa0017710 | Msa0775220 | 0.815688 | 8.133629e-52 | -8.615850e-47 |
| Msa0036810 | Msa0775220 | 0.807181 | 5.729625e-50 | -8.615850e-47 |
| Msa0045620 | Msa0775220 | 0.803128 | 4.041080e-49 | -8.615850e-47 |
| Msa0047560 | Msa0775220 | -0.818288 | 2.119179e-52 | -8.615850e-47 |
| Msa0048410 | Msa0775220 | -0.805799 | 1.121335e-49 | -8.615850e-47 |
| Msa0056230 | Msa0775220 | -0.812935 | 3.300143e-51 | -8.615850e-47 |
| Msa0073270 | Msa0775220 | 0.811787 | 5.877483e-51 | -8.615850e-47 |
| Msa0085690 | Msa0775220 | -0.852760 | 3.736745e-61 | -8.615850e-47 |
| Msa0089470 | Msa0775220 | -0.813099 | 3.038610e-51 | -8.615850e-47 |
| Msa0106540 | Msa0775220 | 0.803629 | 3.182580e-49 | -8.615850e-47 |
| Msa0612880 | Msa0775220 | -0.816586 | 5.124168e-52 | -8.615850e-47 |
| Msa0614960 | Msa0775220 | 0.815826 | 7.574725e-52 | -8.615850e-47 |
| Msa0622800 | Msa0775220 | -0.803650 | 3.150356e-49 | -8.615850e-47 |
| Msa0626980 | Msa0775220 | 0.803159 | 3.982473e-49 | -8.615850e-47 |
| Msa0627360 | Msa0775220 | 0.806460 | 8.138903e-50 | -8.615850e-47 |
| Msa0646010 | Msa0775220 | 0.812648 | 3.814240e-51 | -8.615850e-47 |
| Msa0646430 | Msa0775220 | 0.811327 | 7.399847e-51 | -8.615850e-47 |
| Msa0655370 | Msa0775220 | 0.808762 | 2.640489e-50 | -8.615850e-47 |
| Msa0659020 | Msa0775220 | -0.801522 | 8.654887e-49 | -8.615850e-47 |
| Msa0661480 | Msa0775220 | 0.800025 | 1.749271e-48 | -8.615850e-47 |
| Msa0680550 | Msa0775220 | -0.800791 | 1.221011e-48 | -8.615850e-47 |
| Msa0685390 | Msa0775220 | -0.844999 | 5.337723e-59 | -8.615850e-47 |
| Msa0686040 | Msa0775220 | 0.810526 | 1.103091e-50 | -8.615850e-47 |
| Msa0689840 | Msa0775220 | 0.803179 | 3.944805e-49 | -8.615850e-47 |
| Msa0699170 | Msa0775220 | 0.820499 | 6.641775e-53 | -8.615850e-47 |
| Msa0701800 | Msa0775220 | -0.800185 | 1.622737e-48 | -8.615850e-47 |
| Msa0708020 | Msa0775220 | 0.813035 | 3.137607e-51 | -8.615850e-47 |
| Msa0729740 | Msa0775220 | -0.801083 | 1.064296e-48 | -8.615850e-47 |
| Msa0732970 | Msa0775220 | 0.806863 | 6.690231e-50 | -8.615850e-47 |
| Msa0761830 | Msa0775220 | 0.801741 | 7.803825e-49 | -8.615850e-47 |
| Msa0773960 | Msa0775220 | 0.804176 | 2.449464e-49 | -8.615850e-47 |
| Msa0775220 | Msa0790650 | -0.800634 | 1.314731e-48 | -8.615850e-47 |
| Msa0775220 | Msa0792410 | 0.801689 | 7.998820e-49 | -8.615850e-47 |
| Msa0775220 | Msa0804170 | 0.809629 | 1.721356e-50 | -8.615850e-47 |
| Msa0775220 | Msa0812610 | 0.893746 | 4.715498e-75 | -8.615850e-47 |
| Msa0775220 | Msa0847140 | 0.825913 | 3.616234e-54 | -8.615850e-47 |
| Msa0775220 | Msa0852890 | 0.878298 | 3.144659e-69 | -8.615850e-47 |
| Msa0775220 | Msa0868050 | -0.819500 | 1.124315e-52 | -8.615850e-47 |
| Msa0775220 | Msa0870220 | -0.802338 | 5.883237e-49 | -8.615850e-47 |
| Msa0775220 | Msa0871420 | 0.818739 | 1.675425e-52 | -8.615850e-47 |
| Msa0775220 | Msa0935930 | -0.807382 | 5.195086e-50 | -8.615850e-47 |
| Msa0775220 | Msa0939610 | 0.805659 | 1.199501e-49 | -8.615850e-47 |
| Msa0775220 | Msa0941150 | -0.820962 | 5.199421e-53 | -8.615850e-47 |
| Msa0775220 | Msa0964400 | -0.813276 | 2.777920e-51 | -8.615850e-47 |
| Msa0775220 | Msa1003110 | 0.813338 | 2.691922e-51 | -8.615850e-47 |
| Msa0775220 | Msa1025200 | 0.810439 | 1.152148e-50 | -8.615850e-47 |
| Msa0775220 | Msa1036590 | 0.805782 | 1.130221e-49 | -8.615850e-47 |
| Msa0775220 | Msa1039150 | -0.806687 | 7.289128e-50 | -8.615850e-47 |
| Msa0775220 | Msa1042300 | 0.813413 | 2.592496e-51 | -8.615850e-47 |
| Msa0775220 | Msa1057940 | -0.805958 | 1.038038e-49 | -8.615850e-47 |
| Msa0775220 | Msa1076900 | 0.805926 | 1.054610e-49 | -8.615850e-47 |
| Msa0775220 | Msa1083660 | -0.806848 | 6.737878e-50 | -8.615850e-47 |
| Msa0775220 | Msa1093190 | -0.810612 | 1.057272e-50 | -8.615850e-47 |
| Msa0775220 | Msa1104020 | -0.803851 | 2.862129e-49 | -8.615850e-47 |
| Msa0775220 | Msa1121080 | 0.811351 | 7.312852e-51 | -8.615850e-47 |
| Msa0775220 | Msa1122710 | -0.806803 | 6.887070e-50 | -8.615850e-47 |
| Msa0775220 | Msa1127200 | 0.812716 | 3.684887e-51 | -8.615850e-47 |
| Msa0775220 | Msa1133860 | 0.811225 | 7.786433e-51 | -8.615850e-47 |
| Msa0775220 | Msa1146980 | 0.802770 | 4.791897e-49 | -8.615850e-47 |
| Msa0775220 | Msa1156670 | 0.808601 | 2.858907e-50 | -8.615850e-47 |
| Msa0775220 | Msa1165460 | 0.807917 | 3.998477e-50 | -8.615850e-47 |
| Msa0775220 | Msa1186670 | 0.809304 | 2.022121e-50 | -8.615850e-47 |
| Msa0775220 | Msa1191530 | -0.810546 | 1.092646e-50 | -8.615850e-47 |
| Msa0775220 | Msa1194480 | -0.815444 | 9.215648e-52 | -8.615850e-47 |
| Msa0775220 | Msa1199540 | -0.801332 | 9.467169e-49 | -8.615850e-47 |
| Msa0775220 | Msa1205270 | -0.802910 | 4.483061e-49 | -8.615850e-47 |
| Msa0775220 | Msa1217890 | 0.803589 | 3.243857e-49 | -8.615850e-47 |
| Msa0775220 | Msa1255030 | -0.807741 | 4.358783e-50 | -8.615850e-47 |
| Msa0775220 | Msa1265570 | 0.800510 | 1.393018e-48 | -8.615850e-47 |
| Msa0775220 | Msa1266120 | -0.800483 | 1.411210e-48 | -8.615850e-47 |
| Msa0775220 | Msa1286860 | -0.803008 | 4.278288e-49 | -8.615850e-47 |
| Msa0775220 | Msa1290090 | -0.811868 | 5.645713e-51 | -8.615850e-47 |
| Msa0775220 | Msa1295210 | -0.800349 | 1.502395e-48 | -8.615850e-47 |
| Msa0775220 | Msa1297080 | 0.814604 | 1.415755e-51 | -8.615850e-47 |
| Msa0775220 | Msa1297220 | -0.811245 | 7.711691e-51 | -8.615850e-47 |
| Msa0775220 | Msa1320660 | -0.809813 | 1.572104e-50 | -8.615850e-47 |
| Msa0775220 | Msa1328860 | 0.810708 | 1.007858e-50 | -8.615850e-47 |
| Msa0775220 | Msa1334670 | 0.800693 | 1.278387e-48 | -8.615850e-47 |
| Msa0775220 | Msa1342360 | -0.809105 | 2.230400e-50 | -8.615850e-47 |
| Msa0775220 | Msa1342760 | 0.802420 | 5.658903e-49 | -8.615850e-47 |
| Msa0775220 | Msa1362590 | 0.804396 | 2.204630e-49 | -8.615850e-47 |
| Msa0775220 | Msa1371800 | 0.810524 | 1.104230e-50 | -8.615850e-47 |
| Msa0775220 | Msa1376310 | 0.807993 | 3.853269e-50 | -8.615850e-47 |
| Msa0775220 | Msa1377460 | 0.807763 | 4.312642e-50 | -8.615850e-47 |
| Msa0775220 | Msa1381300 | -0.808600 | 2.860156e-50 | -8.615850e-47 |
| Msa0775220 | Msa1384970 | -0.840010 | 1.125002e-57 | -8.615850e-47 |
| Msa0775220 | Msa1386910 | -0.800554 | 1.364967e-48 | -8.615850e-47 |
| Msa0775220 | Msa1387100 | -0.809122 | 2.211392e-50 | -8.615850e-47 |
| Msa0775220 | Msa1390480 | -0.806987 | 6.297474e-50 | -8.615850e-47 |
| Msa0775220 | Msa1392570 | -0.819949 | 8.876270e-53 | -8.615850e-47 |
| Msa0775220 | Msa1405830 | 0.804100 | 2.540533e-49 | -8.615850e-47 |
| Msa0775220 | Msa1413020 | 0.812482 | 4.146504e-51 | -8.615850e-47 |
| Msa0775220 | Msa1464470 | -0.818927 | 1.517746e-52 | -8.615850e-47 |
| Msa0121320 | Msa0775220 | 0.801569 | 8.464801e-49 | -8.615850e-47 |
| Msa0130360 | Msa0775220 | 0.819053 | 1.420938e-52 | -8.615850e-47 |
| Msa0132080 | Msa0775220 | -0.850314 | 1.839412e-60 | -8.615850e-47 |
| Msa0136180 | Msa0775220 | -0.805194 | 1.501644e-49 | -8.615850e-47 |
| Msa0140870 | Msa0775220 | -0.808128 | 3.605553e-50 | -8.615850e-47 |
| Msa0144010 | Msa0775220 | 0.800136 | 1.660223e-48 | -8.615850e-47 |
| Msa0151210 | Msa0775220 | -0.834745 | 2.509034e-56 | -8.615850e-47 |
| Msa0154710 | Msa0775220 | -0.802881 | 4.545679e-49 | -8.615850e-47 |
| Msa0165820 | Msa0775220 | -0.800026 | 1.748233e-48 | -8.615850e-47 |
| Msa0166180 | Msa0775220 | 0.801754 | 7.754799e-49 | -8.615850e-47 |
| Msa0178440 | Msa0775220 | -0.806873 | 6.659337e-50 | -8.615850e-47 |
| Msa0206370 | Msa0775220 | 0.806877 | 6.644773e-50 | -8.615850e-47 |
| Msa0211460 | Msa0775220 | 0.832104 | 1.143329e-55 | -8.615850e-47 |
| Msa0212950 | Msa0775220 | -0.821641 | 3.624080e-53 | -8.615850e-47 |
| Msa0219840 | Msa0775220 | 0.812502 | 4.105866e-51 | -8.615850e-47 |
| Msa0221180 | Msa0775220 | 0.834201 | 3.437911e-56 | -8.615850e-47 |
| Msa0230920 | Msa0775220 | 0.800499 | 1.400797e-48 | -8.615850e-47 |
| Msa0372100 | Msa0775220 | 0.804256 | 2.356742e-49 | -8.615850e-47 |
| Msa0379890 | Msa0775220 | -0.801576 | 8.436196e-49 | -8.615850e-47 |
| Msa0385030 | Msa0775220 | 0.805721 | 1.164504e-49 | -8.615850e-47 |
| Msa0403740 | Msa0775220 | -0.818467 | 1.930663e-52 | -8.615850e-47 |
| Msa0419420 | Msa0775220 | -0.806294 | 8.821073e-50 | -8.615850e-47 |
| Msa0422820 | Msa0775220 | 0.806714 | 7.191808e-50 | -8.615850e-47 |
| Msa0422900 | Msa0775220 | 0.820562 | 6.423591e-53 | -8.615850e-47 |
| Msa0456450 | Msa0775220 | -0.810922 | 9.059458e-51 | -8.615850e-47 |
| Msa0463820 | Msa0775220 | -0.806546 | 7.805164e-50 | -8.615850e-47 |
| Msa0238960 | Msa0775220 | -0.815375 | 9.547633e-52 | -8.615850e-47 |
| Msa0253230 | Msa0775220 | -0.821582 | 3.739578e-53 | -8.615850e-47 |
| Msa0258010 | Msa0775220 | 0.800206 | 1.607075e-48 | -8.615850e-47 |
| Msa0262750 | Msa0775220 | 0.802988 | 4.319780e-49 | -8.615850e-47 |
| Msa0267450 | Msa0775220 | -0.800250 | 1.574321e-48 | -8.615850e-47 |
| Msa0277320 | Msa0775220 | 0.813776 | 2.157072e-51 | -8.615850e-47 |
| Msa0290800 | Msa0775220 | 0.830239 | 3.284803e-55 | -8.615850e-47 |
| Msa0298690 | Msa0775220 | 0.806726 | 7.151228e-50 | -8.615850e-47 |
| Msa0307630 | Msa0775220 | 0.802369 | 5.797082e-49 | -8.615850e-47 |
| Msa0328870 | Msa0775220 | 0.815909 | 7.258688e-52 | -8.615850e-47 |
| Msa0331070 | Msa0775220 | -0.831350 | 1.754697e-55 | -8.615850e-47 |
| Msa0336550 | Msa0775220 | -0.803658 | 3.138341e-49 | -8.615850e-47 |
| Msa0364030 | Msa0775220 | -0.816960 | 4.223254e-52 | -8.615850e-47 |
| Msa0483090 | Msa0775220 | -0.816810 | 4.565262e-52 | -8.615850e-47 |
| Msa0483410 | Msa0775220 | -0.803382 | 3.579884e-49 | -8.615850e-47 |
| Msa0506750 | Msa0775220 | 0.808635 | 2.811533e-50 | -8.615850e-47 |
| Msa0528310 | Msa0775220 | 0.831281 | 1.824699e-55 | -8.615850e-47 |
| Msa0530660 | Msa0775220 | 0.802954 | 4.390285e-49 | -8.615850e-47 |
| Msa0549170 | Msa0775220 | 0.805258 | 1.455828e-49 | -8.615850e-47 |
| Msa0549960 | Msa0775220 | 0.819280 | 1.261952e-52 | -8.615850e-47 |
| Msa0559640 | Msa0775220 | -0.810330 | 1.216319e-50 | -8.615850e-47 |
| Msa0568460 | Msa0775220 | -0.806020 | 1.007467e-49 | -8.615850e-47 |
| Msa0577960 | Msa0775220 | -0.800628 | 1.318258e-48 | -8.615850e-47 |
| Msa0587730 | Msa0775220 | 0.810120 | 1.349571e-50 | -8.615850e-47 |
| Msa0588500 | Msa0775220 | 0.814330 | 1.627536e-51 | -8.615850e-47 |
| Msa0601470 | Msa0775220 | -0.808639 | 2.805774e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0775220 | MtrunA17_Chr5g0429541 | 85.424 | 590 | 35 | 1 | 1 | 539 | 1 | 590 | 0.0 | 1028 |
| Msa0775220 | MtrunA17_Chr5g0429581 | 86.325 | 351 | 46 | 2 | 1 | 349 | 1 | 351 | 0.0 | 630 |
| Msa0775220 | MtrunA17_Chr5g0429581 | 92.754 | 207 | 15 | 0 | 333 | 539 | 398 | 604 | 1.48e-134 | 403 |
| Msa0775220 | MtrunA17_Chr3g0104081 | 73.239 | 355 | 84 | 4 | 1 | 349 | 18 | 367 | 0.0 | 539 |
| Msa0775220 | MtrunA17_Chr3g0104081 | 68.018 | 222 | 66 | 2 | 320 | 537 | 397 | 617 | 2.99e-95 | 302 |
| Msa0775220 | MtrunA17_Chr3g0118971 | 46.600 | 603 | 246 | 10 | 5 | 538 | 28 | 623 | 0.0 | 525 |
| Msa0775220 | MtrunA17_Chr2g0292341 | 46.358 | 604 | 240 | 12 | 5 | 535 | 30 | 622 | 2.11e-176 | 512 |
| Msa0775220 | MtrunA17_Chr7g0253561 | 45.033 | 604 | 248 | 13 | 5 | 535 | 4 | 596 | 6.34e-166 | 484 |
| Msa0775220 | MtrunA17_Chr6g0461191 | 54.701 | 351 | 148 | 3 | 5 | 349 | 28 | 373 | 1.29e-131 | 396 |
| Msa0775220 | MtrunA17_Chr6g0461191 | 47.748 | 222 | 108 | 4 | 320 | 536 | 403 | 621 | 4.20e-59 | 206 |
| Msa0775220 | MtrunA17_Chr6g0461231 | 53.846 | 351 | 151 | 3 | 5 | 349 | 28 | 373 | 4.20e-129 | 390 |
| Msa0775220 | MtrunA17_Chr6g0461231 | 47.768 | 224 | 103 | 5 | 320 | 535 | 403 | 620 | 1.54e-55 | 197 |
| Msa0775220 | MtrunA17_Chr6g0461211 | 54.310 | 348 | 154 | 3 | 5 | 349 | 28 | 373 | 1.92e-128 | 389 |
| Msa0775220 | MtrunA17_Chr6g0461211 | 49.321 | 221 | 104 | 4 | 320 | 535 | 403 | 620 | 7.92e-57 | 201 |
| Msa0775220 | MtrunA17_Chr6g0461221 | 52.874 | 348 | 159 | 3 | 5 | 349 | 29 | 374 | 3.33e-123 | 377 |
| Msa0775220 | MtrunA17_Chr6g0461221 | 49.321 | 221 | 104 | 4 | 320 | 535 | 404 | 621 | 2.52e-59 | 208 |
| Msa0775220 | MtrunA17_Chr7g0253551 | 50.143 | 349 | 160 | 5 | 5 | 349 | 29 | 367 | 3.00e-118 | 357 |
| Msa0775220 | MtrunA17_Chr4g0050591 | 27.164 | 335 | 166 | 11 | 5 | 315 | 54 | 334 | 8.65e-22 | 99.8 |
| Msa0775220 | MtrunA17_Chr3g0115601 | 27.976 | 336 | 166 | 12 | 5 | 315 | 44 | 328 | 1.89e-21 | 98.6 |
| Msa0775220 | MtrunA17_Chr5g0425531 | 28.615 | 325 | 181 | 11 | 5 | 315 | 50 | 337 | 9.73e-21 | 96.3 |
| Msa0775220 | MtrunA17_Chr5g0425471 | 28.274 | 336 | 166 | 12 | 5 | 315 | 50 | 335 | 2.37e-20 | 95.1 |
| Msa0775220 | MtrunA17_Chr5g0425431 | 28.615 | 325 | 179 | 12 | 5 | 315 | 48 | 333 | 2.87e-20 | 94.7 |
| Msa0775220 | MtrunA17_Chr5g0425451 | 28.615 | 325 | 179 | 12 | 5 | 315 | 50 | 335 | 6.20e-20 | 94.0 |
| Msa0775220 | MtrunA17_Chr1g0207281 | 30.196 | 255 | 148 | 10 | 85 | 315 | 89 | 337 | 6.06e-19 | 90.9 |
| Msa0775220 | MtrunA17_Chr7g0269871 | 31.148 | 244 | 133 | 10 | 95 | 315 | 88 | 319 | 3.17e-18 | 88.6 |
| Msa0775220 | MtrunA17_Chr2g0278761 | 26.567 | 335 | 168 | 12 | 5 | 315 | 55 | 335 | 1.04e-17 | 86.7 |
| Msa0775220 | MtrunA17_Chr1g0194841 | 30.453 | 243 | 136 | 8 | 95 | 315 | 83 | 314 | 4.75e-16 | 81.6 |
| Msa0775220 | MtrunA17_Chr2g0294751 | 30.116 | 259 | 146 | 10 | 86 | 320 | 77 | 324 | 4.82e-16 | 81.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0775220 | AT3G47000.1 | 59.030 | 598 | 176 | 9 | 4 | 535 | 9 | 603 | 0.0 | 678 |
| Msa0775220 | AT3G47050.1 | 57.215 | 596 | 188 | 8 | 4 | 535 | 9 | 601 | 0.0 | 654 |
| Msa0775220 | AT5G04885.2 | 47.421 | 601 | 239 | 10 | 4 | 535 | 46 | 638 | 0.0 | 538 |
| Msa0775220 | AT5G04885.3 | 47.421 | 601 | 239 | 10 | 4 | 535 | 29 | 621 | 0.0 | 537 |
| Msa0775220 | AT5G04885.1 | 47.421 | 601 | 239 | 10 | 4 | 535 | 29 | 621 | 0.0 | 537 |
| Msa0775220 | AT3G47000.3 | 68.103 | 348 | 108 | 3 | 4 | 349 | 9 | 355 | 2.76e-174 | 499 |
| Msa0775220 | AT5G20950.2 | 45.500 | 600 | 250 | 10 | 5 | 535 | 26 | 617 | 1.50e-168 | 491 |
| Msa0775220 | AT5G20950.1 | 45.500 | 600 | 250 | 10 | 5 | 535 | 26 | 617 | 1.50e-168 | 491 |
| Msa0775220 | AT5G20950.3 | 45.500 | 600 | 250 | 10 | 5 | 535 | 104 | 695 | 2.23e-167 | 491 |
| Msa0775220 | AT3G47010.4 | 65.517 | 348 | 117 | 3 | 4 | 349 | 10 | 356 | 3.85e-167 | 481 |
| Msa0775220 | AT3G47010.4 | 58.065 | 62 | 22 | 1 | 323 | 380 | 389 | 450 | 5.16e-14 | 74.7 |
| Msa0775220 | AT3G47010.1 | 65.517 | 348 | 117 | 3 | 4 | 349 | 10 | 356 | 4.27e-165 | 482 |
| Msa0775220 | AT3G47010.1 | 60.633 | 221 | 80 | 3 | 323 | 538 | 389 | 607 | 2.26e-83 | 271 |
| Msa0775220 | AT3G47010.2 | 65.517 | 348 | 117 | 3 | 4 | 349 | 10 | 356 | 4.41e-165 | 482 |
| Msa0775220 | AT3G47010.2 | 60.633 | 221 | 80 | 3 | 323 | 538 | 388 | 606 | 2.28e-83 | 271 |
| Msa0775220 | AT3G47040.3 | 65.957 | 329 | 111 | 1 | 4 | 332 | 9 | 336 | 7.50e-164 | 473 |
| Msa0775220 | AT3G47040.3 | 55.385 | 65 | 25 | 1 | 320 | 380 | 385 | 449 | 4.19e-14 | 75.1 |
| Msa0775220 | AT3G47050.2 | 65.230 | 348 | 118 | 3 | 4 | 349 | 9 | 355 | 2.98e-163 | 469 |
| Msa0775220 | AT3G47040.4 | 65.957 | 329 | 111 | 1 | 4 | 332 | 9 | 336 | 2.86e-162 | 475 |
| Msa0775220 | AT3G47040.4 | 61.161 | 224 | 80 | 3 | 320 | 538 | 385 | 606 | 4.11e-84 | 273 |
| Msa0775220 | AT3G47040.1 | 61.299 | 354 | 111 | 2 | 4 | 332 | 9 | 361 | 2.00e-156 | 461 |
| Msa0775220 | AT3G47040.1 | 61.161 | 224 | 80 | 3 | 320 | 538 | 410 | 631 | 7.35e-84 | 273 |
| Msa0775220 | AT3G47000.2 | 54.673 | 428 | 126 | 8 | 174 | 535 | 1 | 426 | 1.71e-151 | 441 |
| Msa0775220 | AT3G47040.2 | 57.459 | 362 | 120 | 4 | 4 | 332 | 9 | 369 | 4.60e-142 | 424 |
| Msa0775220 | AT3G47040.2 | 61.161 | 224 | 80 | 3 | 320 | 538 | 418 | 639 | 6.10e-84 | 273 |
| Msa0775220 | AT3G62710.1 | 38.951 | 629 | 268 | 17 | 5 | 535 | 38 | 648 | 3.85e-129 | 391 |
| Msa0775220 | AT5G20940.1 | 50.847 | 354 | 162 | 5 | 2 | 349 | 29 | 376 | 5.64e-119 | 364 |
| Msa0775220 | AT5G20940.1 | 47.768 | 224 | 101 | 5 | 320 | 535 | 406 | 621 | 5.10e-48 | 176 |
| Msa0775220 | AT3G47010.3 | 60.633 | 221 | 80 | 3 | 323 | 538 | 210 | 428 | 2.70e-85 | 271 |
| Msa0775220 | AT3G47010.3 | 61.798 | 178 | 66 | 2 | 174 | 349 | 1 | 178 | 3.85e-77 | 249 |
| Msa0775220 | AT3G19620.1 | 28.354 | 328 | 172 | 14 | 5 | 315 | 41 | 322 | 3.81e-21 | 98.2 |
| Msa0775220 | AT5G09730.1 | 27.219 | 338 | 162 | 12 | 5 | 315 | 49 | 329 | 3.90e-20 | 94.7 |
| Msa0775220 | AT5G64570.3 | 26.567 | 335 | 168 | 11 | 5 | 315 | 59 | 339 | 9.17e-20 | 93.2 |
| Msa0775220 | AT5G64570.1 | 26.567 | 335 | 168 | 11 | 5 | 315 | 59 | 339 | 2.72e-19 | 92.4 |
| Msa0775220 | AT1G02640.1 | 32.411 | 253 | 137 | 10 | 86 | 315 | 80 | 321 | 8.06e-19 | 90.9 |
| Msa0775220 | AT5G49360.1 | 26.183 | 317 | 176 | 11 | 12 | 315 | 56 | 327 | 2.15e-18 | 89.4 |
| Msa0775220 | AT1G78060.1 | 27.451 | 255 | 155 | 10 | 86 | 315 | 74 | 323 | 4.65e-15 | 79.0 |
| Msa0775220 | AT5G64570.2 | 30.508 | 177 | 108 | 6 | 146 | 315 | 13 | 181 | 5.66e-13 | 72.0 |
Find 140 sgRNAs with CRISPR-Local
Find 341 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGGGGATCATGACTTTA+AGG | 0.098681 | 5_2:-52031176 | Msa0775220:CDS |
| TAGCCCCTTGGATGTCTTTC+TGG | 0.117618 | 5_2:+52034070 | None:intergenic |
| CCCTTATTCCCTCTTGGTTA+TGG | 0.150094 | 5_2:-52031076 | Msa0775220:CDS |
| CCTTATTCCCTCTTGGTTAT+GGG | 0.218882 | 5_2:-52031075 | Msa0775220:CDS |
| ACAATTCCAGCTCCATTAAA+TGG | 0.220601 | 5_2:+52031346 | None:intergenic |
| AAGATGACTTCTTTAGTTTC+AGG | 0.230158 | 5_2:-52034109 | Msa0775220:CDS |
| GAACTTGTAATCCCATTTAA+TGG | 0.236450 | 5_2:-52031358 | Msa0775220:CDS |
| AAATATCATTTATCAGAAAA+TGG | 0.237478 | 5_2:+52033538 | None:intergenic |
| CCCATAACCAAGAGGGAATA+AGG | 0.250774 | 5_2:+52031075 | None:intergenic |
| GGAATCACATATGTAATCTT+TGG | 0.256680 | 5_2:-52031193 | Msa0775220:CDS |
| GATGAATTATGTCAACCTTA+TGG | 0.304645 | 5_2:-52033361 | Msa0775220:CDS |
| GAATCACATATGTAATCTTT+GGG | 0.323914 | 5_2:-52031192 | Msa0775220:CDS |
| GCAGATTTAGTTCAAAGAAT+TGG | 0.329574 | 5_2:-52035146 | Msa0775220:CDS |
| GGCAACATTGTGAGGAAATA+TGG | 0.333392 | 5_2:+52035861 | None:intergenic |
| ACACTTGTGATTCTGATATC+TGG | 0.335621 | 5_2:-52031298 | Msa0775220:CDS |
| ACCAATGGTGAAGTCTTTAA+TGG | 0.338791 | 5_2:+52036149 | None:intergenic |
| CATGGTAATAATAATGTCTA+TGG | 0.339720 | 5_2:-52035889 | Msa0775220:CDS |
| GGAGATGGAGGCACAGAAAA+AGG | 0.340117 | 5_2:-52033702 | Msa0775220:CDS |
| GGATGGACATTTACTAAGTA+TGG | 0.343875 | 5_2:-52031779 | Msa0775220:CDS |
| CATTCAATGAATTCTGTTGA+TGG | 0.344507 | 5_2:+52031451 | None:intergenic |
| TAGTAACAGAGCGTTCAATT+TGG | 0.348021 | 5_2:+52036181 | None:intergenic |
| AACTTCAGGCACAACTATCT+TGG | 0.348806 | 5_2:-52031527 | Msa0775220:intron |
| CATGTCAATTCCAGCATTAA+TGG | 0.351444 | 5_2:+52033309 | None:intergenic |
| AACTATCTTGGATGCTGTTA+AGG | 0.355539 | 5_2:-52031515 | Msa0775220:CDS |
| CTCATAGCATCTTCCCCATC+TGG | 0.364158 | 5_2:+52034162 | None:intergenic |
| TCACCTCCACACTCAGCATA+TGG | 0.370987 | 5_2:+52031388 | None:intergenic |
| TTGGATGTCTTTCTGGAGGT+TGG | 0.371303 | 5_2:+52034077 | None:intergenic |
| GCCTACCTCCCAGCCACAAA+TGG | 0.372066 | 5_2:+52034046 | None:intergenic |
| AGGGGCTACCCATTTGTGGC+TGG | 0.380723 | 5_2:-52034055 | Msa0775220:CDS |
| GAATGTAAGAATTTGATTAC+TGG | 0.380727 | 5_2:+52036466 | None:intergenic |
| AGTAACAGAGCGTTCAATTT+GGG | 0.388014 | 5_2:+52036182 | None:intergenic |
| GAAAGAAAAGCTAGGCTTCA+AGG | 0.389193 | 5_2:-52033514 | Msa0775220:intron |
| TTATGTGGATTGCATAGATC+AGG | 0.401963 | 5_2:-52033619 | Msa0775220:CDS |
| CCATAACCAAGAGGGAATAA+GGG | 0.403111 | 5_2:+52031076 | None:intergenic |
| GTCATCTGATTGGGCTGATA+TGG | 0.403328 | 5_2:-52035983 | Msa0775220:CDS |
| TTAGGCATACCAATCATCTA+TGG | 0.405292 | 5_2:-52035925 | Msa0775220:CDS |
| TTTGGGGATCATGACTTTAA+GGG | 0.405861 | 5_2:-52031175 | Msa0775220:CDS |
| GCCAAGAGAATCCTTGTTGC+TGG | 0.408515 | 5_2:-52031836 | Msa0775220:CDS |
| AGTTGTTCCATTTCACCGTT+TGG | 0.409373 | 5_2:-52036373 | Msa0775220:five_prime_UTR |
| ATCTGGAAGACCTTTGGTCT+TGG | 0.409437 | 5_2:-52031281 | Msa0775220:CDS |
| TTGATGTCCAAACGGTGAAA+TGG | 0.411064 | 5_2:+52036366 | None:intergenic |
| CTCTTGGCGTTCTTATTCAA+TGG | 0.412762 | 5_2:+52031851 | None:intergenic |
| GGGGCTACCCATTTGTGGCT+GGG | 0.413579 | 5_2:-52034054 | Msa0775220:CDS |
| GGAACTCATGCTAATGATAT+CGG | 0.414525 | 5_2:-52031815 | Msa0775220:CDS |
| GGTCTTGGAACAAAGTTTGT+TGG | 0.420128 | 5_2:-52031266 | Msa0775220:CDS |
| AGAAGGAAGTGTCATCTGAT+TGG | 0.420357 | 5_2:-52035993 | Msa0775220:CDS |
| TCTGATATCTGGAAGACCTT+TGG | 0.421164 | 5_2:-52031287 | Msa0775220:CDS |
| TCCATCTCCAACAAAATGTT+TGG | 0.424518 | 5_2:+52033716 | None:intergenic |
| GTAATCCCATTTAATGGAGC+TGG | 0.440659 | 5_2:-52031352 | Msa0775220:CDS |
| ACTCTTCTAAACCAAGTCAT+TGG | 0.441983 | 5_2:+52031145 | None:intergenic |
| GATGACCCCTTATTCCCTCT+TGG | 0.445616 | 5_2:-52031082 | Msa0775220:CDS |
| CAATTCCAGCTCCATTAAAT+GGG | 0.447950 | 5_2:+52031347 | None:intergenic |
| TATGGGACCGATGCTGTTCA+TGG | 0.450117 | 5_2:-52035907 | Msa0775220:CDS |
| CGAGCTTCAACCGTTTCAGC+GGG | 0.461611 | 5_2:+52036258 | None:intergenic |
| CACCTCCACACTCAGCATAT+GGG | 0.463003 | 5_2:+52031389 | None:intergenic |
| ATGACTTTGAAAGAGAAGAT+TGG | 0.465778 | 5_2:-52036213 | Msa0775220:CDS |
| GTATGCCTAACCGCGATTCA+AGG | 0.470531 | 5_2:+52035938 | None:intergenic |
| TTCTTATTCAATGGTATGAA+AGG | 0.474409 | 5_2:+52031860 | None:intergenic |
| GATTCCATTTCCTTCACTAC+CGG | 0.476545 | 5_2:+52031210 | None:intergenic |
| TGATCTATGCAATCCACATA+AGG | 0.477206 | 5_2:+52033621 | None:intergenic |
| GTATATGAATCCCGCTGAAA+CGG | 0.478433 | 5_2:-52036268 | Msa0775220:CDS |
| GCCATTAAAGACTTCACCAT+TGG | 0.484147 | 5_2:-52036150 | Msa0775220:intron |
| TCTAGTGGCCAGATCACAAT+TGG | 0.486949 | 5_2:-52031755 | Msa0775220:intron |
| TCAAAGTCATGAGAGAAAGA+AGG | 0.487888 | 5_2:+52036226 | None:intergenic |
| TCCAAGGGGCTACCCATTTG+TGG | 0.488118 | 5_2:-52034059 | Msa0775220:CDS |
| ATCTCATATTCCAGCTGGAA+TGG | 0.488467 | 5_2:-52033579 | Msa0775220:CDS |
| CGGAATCCATGTAATTGACT+TGG | 0.495993 | 5_2:+52036292 | None:intergenic |
| GCCACAAATGGGTAGCCCCT+TGG | 0.496947 | 5_2:+52034058 | None:intergenic |
| TCCAGCAACAAGGATTCTCT+TGG | 0.497425 | 5_2:+52031835 | None:intergenic |
| GGTAGACGAGTTTCAGAAGT+TGG | 0.498420 | 5_2:-52035962 | Msa0775220:CDS |
| TTGGCCCTTGAATCGCGGTT+AGG | 0.501190 | 5_2:-52035943 | Msa0775220:CDS |
| GATATCAGAATCACAAGTGT+AGG | 0.502063 | 5_2:+52031301 | None:intergenic |
| GAAGGAAGTGTCATCTGATT+GGG | 0.503362 | 5_2:-52035992 | Msa0775220:CDS |
| AAGGCTAACCAATTGTGATC+TGG | 0.508578 | 5_2:+52031747 | None:intergenic |
| GCATCGGTCCCATAGATGAT+TGG | 0.509073 | 5_2:+52035916 | None:intergenic |
| TCTTTAGTTTCAGGCTTGCA+AGG | 0.511093 | 5_2:-52034100 | Msa0775220:CDS |
| ATATCTACTTCCATTAATGC+TGG | 0.513950 | 5_2:-52033319 | Msa0775220:CDS |
| TAACGATAATCTGAACCATA+AGG | 0.514827 | 5_2:+52033346 | None:intergenic |
| GATCCACATGACTCCTTATG+TGG | 0.515960 | 5_2:-52033634 | Msa0775220:CDS |
| TTATGATCTCATATTCCAGC+TGG | 0.516652 | 5_2:-52033584 | Msa0775220:CDS |
| CCTACCTCCCAGCCACAAAT+GGG | 0.519639 | 5_2:+52034047 | None:intergenic |
| CCCCTTGGATGTCTTTCTGG+AGG | 0.520963 | 5_2:+52034073 | None:intergenic |
| ATTCCATTTCCTTCACTACC+GGG | 0.521068 | 5_2:+52031211 | None:intergenic |
| CTTGTAGCAGCATGGTTGCC+CGG | 0.521071 | 5_2:-52031229 | Msa0775220:CDS |
| GAGTTTGACTCCATTCCAGC+TGG | 0.521515 | 5_2:+52033569 | None:intergenic |
| TCACTTGAACTTAGAGCAAG+TGG | 0.523247 | 5_2:-52035113 | Msa0775220:CDS |
| CTTTACTTGTGCTCCTTGTG+TGG | 0.531448 | 5_2:-52035084 | Msa0775220:CDS |
| TTTGTGATTTCTGACTGGGA+GGG | 0.536472 | 5_2:-52033388 | Msa0775220:CDS |
| TTGCCCGGTAGTGAAGGAAA+TGG | 0.538979 | 5_2:-52031214 | Msa0775220:CDS |
| AGGGTAAACTACCAATGACT+TGG | 0.544683 | 5_2:-52031156 | Msa0775220:CDS |
| TCATAGCATCTTCCCCATCT+GGG | 0.547812 | 5_2:+52034163 | None:intergenic |
| CAAGAACCAAGTCAATTACA+TGG | 0.551311 | 5_2:-52036298 | Msa0775220:exon |
| TTTCCTCACAATGTTGCCCT+CGG | 0.551883 | 5_2:-52035856 | Msa0775220:CDS |
| GATGCTGTTAAGGAAGTTGT+GGG | 0.553581 | 5_2:-52031505 | Msa0775220:CDS |
| TCGAGCTTCAACCGTTTCAG+CGG | 0.554785 | 5_2:+52036257 | None:intergenic |
| TATGCCTAACCGCGATTCAA+GGG | 0.555443 | 5_2:+52035939 | None:intergenic |
| TCGGATATCAATGTGGAGGA+TGG | 0.557414 | 5_2:-52031796 | Msa0775220:CDS |
| GCATGGTTGCCCGGTAGTGA+AGG | 0.557802 | 5_2:-52031220 | Msa0775220:CDS |
| GGATGCTGTTAAGGAAGTTG+TGG | 0.558460 | 5_2:-52031506 | Msa0775220:CDS |
| CATTAATGCTGGAATTGACA+TGG | 0.559007 | 5_2:-52033308 | Msa0775220:intron |
| ACCTCCAGAAAGACATCCAA+GGG | 0.562784 | 5_2:-52034074 | Msa0775220:CDS |
| AATGGTATGAAAGGTTTACC+AGG | 0.573901 | 5_2:+52031869 | None:intergenic |
| AGGTCTGCAAAGATCCCAGA+TGG | 0.575622 | 5_2:-52034177 | Msa0775220:CDS |
| GTGAAGTCTTTAATGGCAGA+AGG | 0.576744 | 5_2:+52036156 | None:intergenic |
| ATATCAGAATCACAAGTGTA+GGG | 0.579775 | 5_2:+52031302 | None:intergenic |
| CTGCAAATTTGATGTCCAAA+CGG | 0.580632 | 5_2:+52036358 | None:intergenic |
| GCTACCCATTTGTGGCTGGG+AGG | 0.583997 | 5_2:-52034051 | Msa0775220:intron |
| ATTATTACCATGAACAGCAT+CGG | 0.588155 | 5_2:+52035900 | None:intergenic |
| ACCTCCACACTCAGCATATG+GGG | 0.589300 | 5_2:+52031390 | None:intergenic |
| TTATCAGAAAATGGTGACCA+TGG | 0.590460 | 5_2:+52033547 | None:intergenic |
| TAGGCATACCAATCATCTAT+GGG | 0.592976 | 5_2:-52035924 | Msa0775220:CDS |
| TTTACTAAGTATGGATCTAG+TGG | 0.597699 | 5_2:-52031770 | Msa0775220:CDS |
| CACCAACCTTGTAGCTCCGA+GGG | 0.601062 | 5_2:+52035840 | None:intergenic |
| CAGCTTGATCAATCTGATGA+GGG | 0.604752 | 5_2:-52031118 | Msa0775220:CDS |
| AAACTTTGTTCCAAGACCAA+AGG | 0.605055 | 5_2:+52031271 | None:intergenic |
| TAGCATGAGTTCCAGCAACA+AGG | 0.605520 | 5_2:+52031825 | None:intergenic |
| TATATTATCATATCAAGACT+TGG | 0.606963 | 5_2:-52033661 | Msa0775220:CDS |
| GCTCCGAGGGCAACATTGTG+AGG | 0.608447 | 5_2:+52035853 | None:intergenic |
| TGGAATGGAGTCAAACTCCA+TGG | 0.613942 | 5_2:-52033564 | Msa0775220:CDS |
| CAGAAGCTCTTGTAGCAGCA+TGG | 0.616781 | 5_2:-52031237 | Msa0775220:CDS |
| CGATGCCTTACAGCCACACA+AGG | 0.616991 | 5_2:+52035071 | None:intergenic |
| ACAGCTTGATCAATCTGATG+AGG | 0.622132 | 5_2:-52031119 | Msa0775220:CDS |
| CATAACCAAGAGGGAATAAG+GGG | 0.624050 | 5_2:+52031077 | None:intergenic |
| TATGTGGATTGCATAGATCA+GGG | 0.629131 | 5_2:-52033618 | Msa0775220:CDS |
| ATGTTGCCCTCGGAGCTACA+AGG | 0.632503 | 5_2:-52035846 | Msa0775220:intron |
| AACCTCCAGAAAGACATCCA+AGG | 0.633634 | 5_2:-52034075 | Msa0775220:CDS |
| AAGCTAGCCCATAACCAAGA+GGG | 0.637396 | 5_2:+52031068 | None:intergenic |
| GGTCTGCAAAGATCCCAGAT+GGG | 0.639985 | 5_2:-52034176 | Msa0775220:CDS |
| GTAGCCCCATATGCTGAGTG+TGG | 0.643722 | 5_2:-52031394 | Msa0775220:CDS |
| AGAAGTTGGCCCTTGAATCG+CGG | 0.648209 | 5_2:-52035948 | Msa0775220:CDS |
| AATCACATATGTAATCTTTG+GGG | 0.651156 | 5_2:-52031191 | Msa0775220:CDS |
| GTCTGCAAAGATCCCAGATG+GGG | 0.656027 | 5_2:-52034175 | Msa0775220:CDS |
| CCACCAACCTTGTAGCTCCG+AGG | 0.662538 | 5_2:+52035839 | None:intergenic |
| GCCCCATATGCTGAGTGTGG+AGG | 0.677542 | 5_2:-52031391 | Msa0775220:CDS |
| GATATCGGATATCAATGTGG+AGG | 0.679895 | 5_2:-52031800 | Msa0775220:CDS |
| TTCAGCGGGATTCATATACA+CGG | 0.681364 | 5_2:+52036272 | None:intergenic |
| AATGATATCGGATATCAATG+TGG | 0.685743 | 5_2:-52031803 | Msa0775220:CDS |
| TAAGCTAGCCCATAACCAAG+AGG | 0.693183 | 5_2:+52031067 | None:intergenic |
| AATCCACATAAGGAGTCATG+TGG | 0.712246 | 5_2:+52033631 | None:intergenic |
| CCTCCAGAAAGACATCCAAG+GGG | 0.772128 | 5_2:-52034073 | Msa0775220:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAATAAAAAGAAACTTT+CGG | + | chr5_2:52031104-52031123 | None:intergenic | 10.0% |
| !! | AGCAAAAAAAAAAAAAAAAT+TGG | - | chr5_2:52032021-52032040 | Msa0775220:intron | 10.0% |
| !! | AAAAAAAAAAAAAAAATTGG+TGG | - | chr5_2:52032024-52032043 | Msa0775220:intron | 10.0% |
| !!! | TCTAATATTATCTTAAATTT+TGG | + | chr5_2:52032704-52032723 | None:intergenic | 10.0% |
| !!! | TAATGTTGTAATTAATTTTA+GGG | + | chr5_2:52033170-52033189 | None:intergenic | 10.0% |
| !!! | TTAATGTTGTAATTAATTTT+AGG | + | chr5_2:52033171-52033190 | None:intergenic | 10.0% |
| !! | AATCTATGTTAAAATATTAT+GGG | + | chr5_2:52034275-52034294 | None:intergenic | 10.0% |
| !! | ATTCATAAATTTATTCTTCA+AGG | + | chr5_2:52032077-52032096 | None:intergenic | 15.0% |
| !!! | AGATTACATTTTGAAAATTT+CGG | + | chr5_2:52032129-52032148 | None:intergenic | 15.0% |
| !!! | ATATTATCTTAAATTTTGGT+TGG | + | chr5_2:52032700-52032719 | None:intergenic | 15.0% |
| !!! | TTGATAATCCAAAAAAATAT+TGG | - | chr5_2:52033648-52033667 | Msa0775220:CDS | 15.0% |
| !!! | TAAGTATTGATTTTTGAAAA+TGG | + | chr5_2:52033725-52033744 | None:intergenic | 15.0% |
| !! | AAATATCATTTATCAGAAAA+TGG | + | chr5_2:52034007-52034026 | None:intergenic | 15.0% |
| !! | ATCTATGTTAAAATATTATG+GGG | + | chr5_2:52034274-52034293 | None:intergenic | 15.0% |
| !! | CAATCTATGTTAAAATATTA+TGG | + | chr5_2:52034276-52034295 | None:intergenic | 15.0% |
| !!! | ATGAATTTTTCATATCTTAA+AGG | + | chr5_2:52034349-52034368 | None:intergenic | 15.0% |
| !!! | TTTAAGATATGAAAAATTCA+TGG | - | chr5_2:52034348-52034367 | Msa0775220:intron | 15.0% |
| !! | AGAAAGTAAAACAAAACAAA+AGG | + | chr5_2:52031733-52031752 | None:intergenic | 20.0% |
| !!! | TTTAGACATTTTCAAATAGT+CGG | - | chr5_2:52032173-52032192 | Msa0775220:intron | 20.0% |
| !!! | ATTATGTTATGTGTTTTGTT+AGG | - | chr5_2:52032892-52032911 | Msa0775220:intron | 20.0% |
| !!! | TTGATTACTCTTTTCAAAAT+AGG | - | chr5_2:52032979-52032998 | Msa0775220:intron | 20.0% |
| !! | TTCTCTATAAATAGAAGAAT+GGG | + | chr5_2:52033055-52033074 | None:intergenic | 20.0% |
| !! | ATTCTCTATAAATAGAAGAA+TGG | + | chr5_2:52033056-52033075 | None:intergenic | 20.0% |
| !! | AAAATAACAAACAGTGATAA+CGG | - | chr5_2:52033128-52033147 | Msa0775220:intron | 20.0% |
| !! | TCTTTCATAGAAGAATTTAA+AGG | + | chr5_2:52033231-52033250 | None:intergenic | 20.0% |
| !!! | ATTTAATAGTTTGAAACCAT+CGG | + | chr5_2:52033618-52033637 | None:intergenic | 20.0% |
| !!! | AATGTGTACCAATATTTTTT+TGG | + | chr5_2:52033659-52033678 | None:intergenic | 20.0% |
| !! | TATATTATCATATCAAGACT+TGG | - | chr5_2:52033881-52033900 | Msa0775220:intron | 20.0% |
| !!! | ATTGATAGTGTTTATATAGA+AGG | + | chr5_2:52035416-52035435 | None:intergenic | 20.0% |
| !!! | AGAACACTAACATTTTTTTA+TGG | - | chr5_2:52035476-52035495 | Msa0775220:intron | 20.0% |
| !!! | GAACACTAACATTTTTTTAT+GGG | - | chr5_2:52035477-52035496 | Msa0775220:intron | 20.0% |
| !! | GACAATTATTCATTAATCTT+GGG | - | chr5_2:52035879-52035898 | Msa0775220:CDS | 20.0% |
| !!! | ATAAATCTTCAGTTTTTGAT+TGG | + | chr5_2:52035957-52035976 | None:intergenic | 20.0% |
| ! | GAATGTAAGAATTTGATTAC+TGG | + | chr5_2:52031079-52031098 | None:intergenic | 25.0% |
| !! | ATTTTATGAACTTAGCTTCA+TGG | + | chr5_2:52031146-52031165 | None:intergenic | 25.0% |
| ! | TACGAAGATATGATAGTAAA+AGG | + | chr5_2:52031449-52031468 | None:intergenic | 25.0% |
| !!! | TCCTTGTCTTTTTTAACTTA+GGG | - | chr5_2:52031489-52031508 | Msa0775220:CDS | 25.0% |
| ! | CATGGTAATAATAATGTCTA+TGG | - | chr5_2:52031653-52031672 | Msa0775220:intron | 25.0% |
| ! | CTATTACTTAGTTAAAACCT+TGG | + | chr5_2:52031783-52031802 | None:intergenic | 25.0% |
| ! | TGTTAATATTGCAAAAATCG+TGG | - | chr5_2:52031821-52031840 | Msa0775220:CDS | 25.0% |
| ! | GAACAACATTGAATATGTTA+TGG | - | chr5_2:52032605-52032624 | Msa0775220:intron | 25.0% |
| !!! | CTCACTTCTAAACATTTTTT+AGG | + | chr5_2:52032631-52032650 | None:intergenic | 25.0% |
| ! | CTAGGTATATAAATAACACT+AGG | - | chr5_2:52032778-52032797 | Msa0775220:intron | 25.0% |
| !!! | CTTTAAAGCTTAAAATTTCC+TGG | - | chr5_2:52032866-52032885 | Msa0775220:intron | 25.0% |
| ! | TATAAATAGAAGAATGGGAT+TGG | + | chr5_2:52033050-52033069 | None:intergenic | 25.0% |
| ! | AAGGTTCATATTAGAAAGAA+GGG | + | chr5_2:52033212-52033231 | None:intergenic | 25.0% |
| ! | AAAGGTTCATATTAGAAAGA+AGG | + | chr5_2:52033213-52033232 | None:intergenic | 25.0% |
| !!! | TTTTTGAAAATGGTAGTTAC+TGG | + | chr5_2:52033715-52033734 | None:intergenic | 25.0% |
| ! | TTACAACTATTTAGTACTTC+AGG | - | chr5_2:52033784-52033803 | Msa0775220:intron | 25.0% |
| !!! | GATATTTTGAAAGAAAAGCT+AGG | - | chr5_2:52034020-52034039 | Msa0775220:intron | 25.0% |
| ! | ATATATTCATGTACATATGC+AGG | - | chr5_2:52034315-52034334 | Msa0775220:intron | 25.0% |
| !!! | AAACCGTTTTATTTTGAAGA+CGG | + | chr5_2:52034849-52034868 | None:intergenic | 25.0% |
| ! | TATACTACTCAAAACCAAAA+GGG | - | chr5_2:52034961-52034980 | Msa0775220:intron | 25.0% |
| ! | AAAACGACTTAGTAAAACTT+GGG | - | chr5_2:52035128-52035147 | Msa0775220:CDS | 25.0% |
| !!! | TGTTTTTGTTGTTTTGTGAA+CGG | + | chr5_2:52035293-52035312 | None:intergenic | 25.0% |
| ! | TTCTTATTCAATGGTATGAA+AGG | + | chr5_2:52035685-52035704 | None:intergenic | 25.0% |
| ! | CGACAATTATTCATTAATCT+TGG | - | chr5_2:52035878-52035897 | Msa0775220:CDS | 25.0% |
| !!! | TCAGTTTTTGATTGGTTATA+CGG | + | chr5_2:52035949-52035968 | None:intergenic | 25.0% |
| ! | GAATCACATATGTAATCTTT+GGG | - | chr5_2:52036350-52036369 | Msa0775220:five_prime_UTR | 25.0% |
| ! | AATCACATATGTAATCTTTG+GGG | - | chr5_2:52036351-52036370 | Msa0775220:five_prime_UTR | 25.0% |
| ! | ATGACTTTGAAAGAGAAGAT+TGG | - | chr5_2:52031329-52031348 | Msa0775220:CDS | 30.0% |
| !!! | CTCCTTGTCTTTTTTAACTT+AGG | - | chr5_2:52031488-52031507 | Msa0775220:CDS | 30.0% |
| TCCCTAAGTTAAAAAAGACA+AGG | + | chr5_2:52031493-52031512 | None:intergenic | 30.0% | |
| !!! | TTCTCAGAAGTTGCATTTTT+TGG | + | chr5_2:52031533-52031552 | None:intergenic | 30.0% |
| ! | AAAAAATGCAACTTCTGAGA+AGG | - | chr5_2:52031532-52031551 | Msa0775220:intron | 30.0% |
| ATTATTACCATGAACAGCAT+CGG | + | chr5_2:52031645-52031664 | None:intergenic | 30.0% | |
| CATAAGAAATTATGATGTCG+TGG | - | chr5_2:52031899-52031918 | Msa0775220:intron | 30.0% | |
| !!! | TAGAGCAGTGTTTTAAAAGA+CGG | + | chr5_2:52031944-52031963 | None:intergenic | 30.0% |
| GAAGGAGAAAGTAAGTAATT+TGG | - | chr5_2:52031994-52032013 | Msa0775220:intron | 30.0% | |
| !!! | TGTAATCTTTTGACTTGAAC+AGG | - | chr5_2:52032141-52032160 | Msa0775220:intron | 30.0% |
| ! | AAGCTTTGATTCTACATTTG+TGG | - | chr5_2:52032358-52032377 | Msa0775220:intron | 30.0% |
| ! | GCAGATTTAGTTCAAAGAAT+TGG | - | chr5_2:52032396-52032415 | Msa0775220:intron | 30.0% |
| CTAACTCAACCTTACAATAT+CGG | + | chr5_2:52032675-52032694 | None:intergenic | 30.0% | |
| TTATATACCTAGAGATGTCT+AGG | + | chr5_2:52032770-52032789 | None:intergenic | 30.0% | |
| AACACATAACATAATCATCC+AGG | + | chr5_2:52032887-52032906 | None:intergenic | 30.0% | |
| !! | TGTTTTGTTAGGATTCTTTG+AGG | - | chr5_2:52032903-52032922 | Msa0775220:intron | 30.0% |
| AAAAGAGAATTATTTGTCCC+CGG | - | chr5_2:52032937-52032956 | Msa0775220:intron | 30.0% | |
| !! | TTTTAGTTGTTTGCTGGTTA+GGG | + | chr5_2:52033105-52033124 | None:intergenic | 30.0% |
| !!! | TTTCTGTTTTAGTTGTTTGC+TGG | + | chr5_2:52033111-52033130 | None:intergenic | 30.0% |
| AGGTTCATATTAGAAAGAAG+GGG | + | chr5_2:52033211-52033230 | None:intergenic | 30.0% | |
| ! | ATTTGCTAAGCAGAGAATTT+AGG | + | chr5_2:52033298-52033317 | None:intergenic | 30.0% |
| ! | AAGATGACTTCTTTAGTTTC+AGG | - | chr5_2:52033433-52033452 | Msa0775220:intron | 30.0% |
| TTTACAATGTGATATACCGA+TGG | - | chr5_2:52033599-52033618 | Msa0775220:CDS | 30.0% | |
| ! | TTACTGGTTAAGAATCCTTA+TGG | + | chr5_2:52033699-52033718 | None:intergenic | 30.0% |
| ! | ACAGAAAAAGGTGTAAATGA+GGG | - | chr5_2:52033852-52033871 | Msa0775220:intron | 30.0% |
| ! | GCTTCAAGGTATATTTTCTT+TGG | - | chr5_2:52034042-52034061 | Msa0775220:intron | 30.0% |
| TGGAAATTGATCTTTGTTGA+TGG | - | chr5_2:52034062-52034081 | Msa0775220:CDS | 30.0% | |
| GATGAATTATGTCAACCTTA+TGG | - | chr5_2:52034181-52034200 | Msa0775220:intron | 30.0% | |
| TAACGATAATCTGAACCATA+AGG | + | chr5_2:52034199-52034218 | None:intergenic | 30.0% | |
| ATATCTACTTCCATTAATGC+TGG | - | chr5_2:52034223-52034242 | Msa0775220:intron | 30.0% | |
| CCAAAAACAACACAATTTGA+TGG | + | chr5_2:52034702-52034721 | None:intergenic | 30.0% | |
| !!! | CCATCAAATTGTGTTGTTTT+TGG | - | chr5_2:52034699-52034718 | Msa0775220:intron | 30.0% |
| !!! | CTTCGATGGTAATTTTTTCA+AGG | + | chr5_2:52034737-52034756 | None:intergenic | 30.0% |
| ATTACCATCGAAGAGATTAT+CGG | - | chr5_2:52034744-52034763 | Msa0775220:intron | 30.0% | |
| ACCCTCAAATAAAGCTATTA+TGG | - | chr5_2:52034920-52034939 | Msa0775220:intron | 30.0% | |
| !! | GCCATAATAGCTTTATTTGA+GGG | + | chr5_2:52034924-52034943 | None:intergenic | 30.0% |
| GTATACGTACTATATTTGAG+TGG | + | chr5_2:52034946-52034965 | None:intergenic | 30.0% | |
| GTATACTACTCAAAACCAAA+AGG | - | chr5_2:52034960-52034979 | Msa0775220:intron | 30.0% | |
| ! | TTTTTCTTCCATTCTCCATT+TGG | + | chr5_2:52035028-52035047 | None:intergenic | 30.0% |
| AAATGGAGAATGGAAGAAAA+AGG | - | chr5_2:52035027-52035046 | Msa0775220:intron | 30.0% | |
| ATTGATATGTGAGAAACTTG+AGG | - | chr5_2:52035073-52035092 | Msa0775220:intron | 30.0% | |
| GAAAACGACTTAGTAAAACT+TGG | - | chr5_2:52035127-52035146 | Msa0775220:CDS | 30.0% | |
| AAACGACTTAGTAAAACTTG+GGG | - | chr5_2:52035129-52035148 | Msa0775220:CDS | 30.0% | |
| CATTTCATTCATCACAAAGT+AGG | - | chr5_2:52035359-52035378 | Msa0775220:intron | 30.0% | |
| CATTCCCAATGTTTACTTTA+TGG | - | chr5_2:52035382-52035401 | Msa0775220:intron | 30.0% | |
| AGCTCCATAAAGTAAACATT+GGG | + | chr5_2:52035389-52035408 | None:intergenic | 30.0% | |
| ATTGTAAAAATACCCCACAT+CGG | + | chr5_2:52035452-52035471 | None:intergenic | 30.0% | |
| TTATGCTTCTATCCAATATG+TGG | - | chr5_2:52035519-52035538 | Msa0775220:intron | 30.0% | |
| TATGCTTCTATCCAATATGT+GGG | - | chr5_2:52035520-52035539 | Msa0775220:intron | 30.0% | |
| AAATTGTTAGAACACAAGTG+TGG | + | chr5_2:52035577-52035596 | None:intergenic | 30.0% | |
| !!! | TCCTTGGTTTTGTTGAAAAA+TGG | - | chr5_2:52035643-52035662 | Msa0775220:intron | 30.0% |
| !! | TCCATTTTTCAACAAAACCA+AGG | + | chr5_2:52035647-52035666 | None:intergenic | 30.0% |
| !!! | GGTTTTGTTGAAAAATGGAA+AGG | - | chr5_2:52035648-52035667 | Msa0775220:intron | 30.0% |
| AATGATATCGGATATCAATG+TGG | - | chr5_2:52035739-52035758 | Msa0775220:intron | 30.0% | |
| TTTACTAAGTATGGATCTAG+TGG | - | chr5_2:52035772-52035791 | Msa0775220:intron | 30.0% | |
| AAGAGATGCAAAGCAATTAA+AGG | + | chr5_2:52035817-52035836 | None:intergenic | 30.0% | |
| !! | TTTTGATTGGTTATACGGAT+AGG | + | chr5_2:52035944-52035963 | None:intergenic | 30.0% |
| TATTGTGTTCTTACAACTTC+AGG | - | chr5_2:52036001-52036020 | Msa0775220:CDS | 30.0% | |
| CATTCAATGAATTCTGTTGA+TGG | + | chr5_2:52036094-52036113 | None:intergenic | 30.0% | |
| ! | TCTTTTGCAATTGTTGCTAT+TGG | - | chr5_2:52036124-52036143 | Msa0775220:intron | 30.0% |
| GAACTTGTAATCCCATTTAA+TGG | - | chr5_2:52036184-52036203 | Msa0775220:CDS | 30.0% | |
| ATATCAGAATCACAAGTGTA+GGG | + | chr5_2:52036243-52036262 | None:intergenic | 30.0% | |
| GGAATCACATATGTAATCTT+TGG | - | chr5_2:52036349-52036368 | Msa0775220:five_prime_UTR | 30.0% | |
| CTGCAAATTTGATGTCCAAA+CGG | + | chr5_2:52031187-52031206 | None:intergenic | 35.0% | |
| CAAGAACCAAGTCAATTACA+TGG | - | chr5_2:52031244-52031263 | Msa0775220:CDS | 35.0% | |
| TCAAAGTCATGAGAGAAAGA+AGG | + | chr5_2:52031319-52031338 | None:intergenic | 35.0% | |
| ! | AGTAACAGAGCGTTCAATTT+GGG | + | chr5_2:52031363-52031382 | None:intergenic | 35.0% |
| ! | TAGTAACAGAGCGTTCAATT+TGG | + | chr5_2:52031364-52031383 | None:intergenic | 35.0% |
| ACCAATGGTGAAGTCTTTAA+TGG | + | chr5_2:52031396-52031415 | None:intergenic | 35.0% | |
| !! | TGTAGATATGAGAGTACCAA+TGG | + | chr5_2:52031411-52031430 | None:intergenic | 35.0% |
| !!! | TCAGAAGTTGCATTTTTTGG+TGG | + | chr5_2:52031530-52031549 | None:intergenic | 35.0% |
| TTAGGCATACCAATCATCTA+TGG | - | chr5_2:52031617-52031636 | Msa0775220:intron | 35.0% | |
| TAGGCATACCAATCATCTAT+GGG | - | chr5_2:52031618-52031637 | Msa0775220:intron | 35.0% | |
| AAGTTGAATCTCTATGTCCA+AGG | - | chr5_2:52031763-52031782 | Msa0775220:CDS | 35.0% | |
| TCTTATGTCTTTCTTCGCAA+CGG | + | chr5_2:52031886-52031905 | None:intergenic | 35.0% | |
| !!! | AGAGCAGTGTTTTAAAAGAC+GGG | + | chr5_2:52031943-52031962 | None:intergenic | 35.0% |
| AGCATAGCAAATTCAGAAGT+TGG | + | chr5_2:52032500-52032519 | None:intergenic | 35.0% | |
| !! | AATATCGGTTTGTAAGGCAA+GGG | + | chr5_2:52032660-52032679 | None:intergenic | 35.0% |
| !! | CCTTACAATATCGGTTTGTA+AGG | + | chr5_2:52032666-52032685 | None:intergenic | 35.0% |
| CCTTACAAACCGATATTGTA+AGG | - | chr5_2:52032663-52032682 | Msa0775220:intron | 35.0% | |
| CGATATTGTAAGGTTGAGTT+AGG | - | chr5_2:52032673-52032692 | Msa0775220:intron | 35.0% | |
| ! | AGTTCATTCGTATTGACACT+TGG | - | chr5_2:52032723-52032742 | Msa0775220:intron | 35.0% |
| ! | GATGTCTAGGATTGAAAATC+TGG | + | chr5_2:52032757-52032776 | None:intergenic | 35.0% |
| TTTCAATCCTAGACATCTCT+AGG | - | chr5_2:52032760-52032779 | Msa0775220:intron | 35.0% | |
| AGGGATGTACAATCTTTCTA+TGG | - | chr5_2:52032835-52032854 | Msa0775220:intron | 35.0% | |
| GGGATGTACAATCTTTCTAT+GGG | - | chr5_2:52032836-52032855 | Msa0775220:intron | 35.0% | |
| CTGAATCATAAAAGATGCCT+AGG | - | chr5_2:52033023-52033042 | Msa0775220:intron | 35.0% | |
| !!! | GTTTTAGTTGTTTGCTGGTT+AGG | + | chr5_2:52033106-52033125 | None:intergenic | 35.0% |
| ! | TTTAGGGTAAGCCTTTATAC+AGG | + | chr5_2:52033154-52033173 | None:intergenic | 35.0% |
| AAAAAGCGACACAACATGTT+AGG | + | chr5_2:52033259-52033278 | None:intergenic | 35.0% | |
| ACTAGCATATGTGAATGAAC+AGG | - | chr5_2:52033345-52033364 | Msa0775220:CDS | 35.0% | |
| ACCAACGTAAGTTATATCGA+TGG | + | chr5_2:52033527-52033546 | None:intergenic | 35.0% | |
| TTTAGTTGTCCTTGTCCATA+AGG | - | chr5_2:52033681-52033700 | Msa0775220:CDS | 35.0% | |
| GTTAAGAATCCTTATGGACA+AGG | + | chr5_2:52033693-52033712 | None:intergenic | 35.0% | |
| TCCATCTCCAACAAAATGTT+TGG | + | chr5_2:52033829-52033848 | None:intergenic | 35.0% | |
| ! | AAACATTTTGTTGGAGATGG+AGG | - | chr5_2:52033828-52033847 | Msa0775220:intron | 35.0% |
| ! | CACAGAAAAAGGTGTAAATG+AGG | - | chr5_2:52033851-52033870 | Msa0775220:intron | 35.0% |
| ! | CAGAAAAAGGTGTAAATGAG+GGG | - | chr5_2:52033853-52033872 | Msa0775220:intron | 35.0% |
| TGATCTATGCAATCCACATA+AGG | + | chr5_2:52033924-52033943 | None:intergenic | 35.0% | |
| ! | TTATGTGGATTGCATAGATC+AGG | - | chr5_2:52033923-52033942 | Msa0775220:intron | 35.0% |
| ! | TATGTGGATTGCATAGATCA+GGG | - | chr5_2:52033924-52033943 | Msa0775220:intron | 35.0% |
| TTATGATCTCATATTCCAGC+TGG | - | chr5_2:52033958-52033977 | Msa0775220:intron | 35.0% | |
| TTATCAGAAAATGGTGACCA+TGG | + | chr5_2:52033998-52034017 | None:intergenic | 35.0% | |
| CATGTCAATTCCAGCATTAA+TGG | + | chr5_2:52034236-52034255 | None:intergenic | 35.0% | |
| CATTAATGCTGGAATTGACA+TGG | - | chr5_2:52034234-52034253 | Msa0775220:intron | 35.0% | |
| ! | TTGACATCTCTAGTTCAATC+AGG | - | chr5_2:52034376-52034395 | Msa0775220:intron | 35.0% |
| ! | TGACATCTCTAGTTCAATCA+GGG | - | chr5_2:52034377-52034396 | Msa0775220:intron | 35.0% |
| AGCAAAGATCTGTCAGTTAA+AGG | + | chr5_2:52034481-52034500 | None:intergenic | 35.0% | |
| TTTAACTGACAGATCTTTGC+TGG | - | chr5_2:52034480-52034499 | Msa0775220:intron | 35.0% | |
| AGATCTTTGCTGGATATTGT+TGG | - | chr5_2:52034490-52034509 | Msa0775220:intron | 35.0% | |
| TTACCATCGAAGAGATTATC+GGG | - | chr5_2:52034745-52034764 | Msa0775220:intron | 35.0% | |
| ATAGTCTACTTACGCAACTT+TGG | + | chr5_2:52034818-52034837 | None:intergenic | 35.0% | |
| ACGCCGTCTTCAAAATAAAA+CGG | - | chr5_2:52034843-52034862 | Msa0775220:intron | 35.0% | |
| !! | GGCCATAATAGCTTTATTTG+AGG | + | chr5_2:52034925-52034944 | None:intergenic | 35.0% |
| ACTCATTAACACAAGCCAAA+TGG | - | chr5_2:52035010-52035029 | Msa0775220:intron | 35.0% | |
| CTTGAGGAACAAGGATAAAT+CGG | - | chr5_2:52035089-52035108 | Msa0775220:CDS | 35.0% | |
| ! | TGAGCTTGAACTTTTGTGAA+CGG | + | chr5_2:52035247-52035266 | None:intergenic | 35.0% |
| GAGCTCCATAAAGTAAACAT+TGG | + | chr5_2:52035390-52035409 | None:intergenic | 35.0% | |
| AATGGTATGAAAGGTTTACC+AGG | + | chr5_2:52035676-52035695 | None:intergenic | 35.0% | |
| GGAACTCATGCTAATGATAT+CGG | - | chr5_2:52035727-52035746 | Msa0775220:intron | 35.0% | |
| GGATGGACATTTACTAAGTA+TGG | - | chr5_2:52035763-52035782 | Msa0775220:intron | 35.0% | |
| AACTATCTTGGATGCTGTTA+AGG | - | chr5_2:52036027-52036046 | Msa0775220:CDS | 35.0% | |
| CAATTCCAGCTCCATTAAAT+GGG | + | chr5_2:52036198-52036217 | None:intergenic | 35.0% | |
| ACAATTCCAGCTCCATTAAA+TGG | + | chr5_2:52036199-52036218 | None:intergenic | 35.0% | |
| GATATCAGAATCACAAGTGT+AGG | + | chr5_2:52036244-52036263 | None:intergenic | 35.0% | |
| ACACTTGTGATTCTGATATC+TGG | - | chr5_2:52036244-52036263 | Msa0775220:CDS | 35.0% | |
| AAACTTTGTTCCAAGACCAA+AGG | + | chr5_2:52036274-52036293 | None:intergenic | 35.0% | |
| TTTGGGGATCATGACTTTAA+GGG | - | chr5_2:52036367-52036386 | Msa0775220:five_prime_UTR | 35.0% | |
| ACTCTTCTAAACCAAGTCAT+TGG | + | chr5_2:52036400-52036419 | None:intergenic | 35.0% | |
| AGTTGTTCCATTTCACCGTT+TGG | - | chr5_2:52031169-52031188 | Msa0775220:CDS | 40.0% | |
| TTGATGTCCAAACGGTGAAA+TGG | + | chr5_2:52031179-52031198 | None:intergenic | 40.0% | |
| CGGAATCCATGTAATTGACT+TGG | + | chr5_2:52031253-52031272 | None:intergenic | 40.0% | |
| TTCAGCGGGATTCATATACA+CGG | + | chr5_2:52031273-52031292 | None:intergenic | 40.0% | |
| GTATATGAATCCCGCTGAAA+CGG | - | chr5_2:52031274-52031293 | Msa0775220:CDS | 40.0% | |
| GTGAAGTCTTTAATGGCAGA+AGG | + | chr5_2:52031389-52031408 | None:intergenic | 40.0% | |
| GCCATTAAAGACTTCACCAT+TGG | - | chr5_2:52031392-52031411 | Msa0775220:CDS | 40.0% | |
| !! | AGAAGGAAGTGTCATCTGAT+TGG | - | chr5_2:52031549-52031568 | Msa0775220:intron | 40.0% |
| !! | GAAGGAAGTGTCATCTGATT+GGG | - | chr5_2:52031550-52031569 | Msa0775220:intron | 40.0% |
| GGCAACATTGTGAGGAAATA+TGG | + | chr5_2:52031684-52031703 | None:intergenic | 40.0% | |
| TACGACTGATACAGTCACAA+TGG | - | chr5_2:52031849-52031868 | Msa0775220:CDS | 40.0% | |
| AATCCTTCCACGAACTTTGA+AGG | - | chr5_2:52031976-52031995 | Msa0775220:intron | 40.0% | |
| ACTTTCTCCTTCAAAGTTCG+TGG | + | chr5_2:52031986-52032005 | None:intergenic | 40.0% | |
| ATAGTCGGAATGAGAAGTTG+AGG | - | chr5_2:52032188-52032207 | Msa0775220:intron | 40.0% | |
| TCACTTGAACTTAGAGCAAG+TGG | - | chr5_2:52032429-52032448 | Msa0775220:intron | 40.0% | |
| !! | CAATATCGGTTTGTAAGGCA+AGG | + | chr5_2:52032661-52032680 | None:intergenic | 40.0% |
| ACTCACCTCATTCGCAAAAA+GGG | - | chr5_2:52032816-52032835 | Msa0775220:intron | 40.0% | |
| ! | TACATCCCTTTTTGCGAATG+AGG | + | chr5_2:52032824-52032843 | None:intergenic | 40.0% |
| TCTCTCTTGTGTACAAACTC+CGG | + | chr5_2:52032959-52032978 | None:intergenic | 40.0% | |
| !! | AGTGATAACGGCCTGTATAA+AGG | - | chr5_2:52033140-52033159 | Msa0775220:intron | 40.0% |
| GAAGGGGTCAAACACAAATA+GGG | + | chr5_2:52033195-52033214 | None:intergenic | 40.0% | |
| AGAAGGGGTCAAACACAAAT+AGG | + | chr5_2:52033196-52033215 | None:intergenic | 40.0% | |
| ! | TCTTTAGTTTCAGGCTTGCA+AGG | - | chr5_2:52033442-52033461 | Msa0775220:intron | 40.0% |
| GCCATCGATATAACTTACGT+TGG | - | chr5_2:52033523-52033542 | Msa0775220:CDS | 40.0% | |
| ! | GCTTGTGCCAAACATTTTGT+TGG | - | chr5_2:52033819-52033838 | Msa0775220:intron | 40.0% |
| ! | GCCAAACATTTTGTTGGAGA+TGG | - | chr5_2:52033825-52033844 | Msa0775220:intron | 40.0% |
| AATCCACATAAGGAGTCATG+TGG | + | chr5_2:52033914-52033933 | None:intergenic | 40.0% | |
| ATCTCATATTCCAGCTGGAA+TGG | - | chr5_2:52033963-52033982 | Msa0775220:intron | 40.0% | |
| GAAAGAAAAGCTAGGCTTCA+AGG | - | chr5_2:52034028-52034047 | Msa0775220:intron | 40.0% | |
| GAAATCACAAAACCCTACAG+TGG | + | chr5_2:52034145-52034164 | None:intergenic | 40.0% | |
| !! | AGGGTTTTGTGATTTCTGAC+TGG | - | chr5_2:52034149-52034168 | Msa0775220:CDS | 40.0% |
| !! | GGGTTTTGTGATTTCTGACT+GGG | - | chr5_2:52034150-52034169 | Msa0775220:CDS | 40.0% |
| ! | TTTTGTGATTTCTGACTGGG+AGG | - | chr5_2:52034153-52034172 | Msa0775220:CDS | 40.0% |
| TTTGTGATTTCTGACTGGGA+GGG | - | chr5_2:52034154-52034173 | Msa0775220:CDS | 40.0% | |
| TCATGTACATATGCAGGTGA+TGG | - | chr5_2:52034321-52034340 | Msa0775220:intron | 40.0% | |
| ! | GACATCTCTAGTTCAATCAG+GGG | - | chr5_2:52034378-52034397 | Msa0775220:intron | 40.0% |
| GCATCATCAATCCTGGATAT+TGG | + | chr5_2:52034409-52034428 | None:intergenic | 40.0% | |
| CAAGGTAAGTGAAGTTTAGC+TGG | - | chr5_2:52034516-52034535 | Msa0775220:intron | 40.0% | |
| AATGTCGCGAAACGTCTTAA+TGG | + | chr5_2:52034793-52034812 | None:intergenic | 40.0% | |
| !!! | GTTTTATTTTGAAGACGGCG+TGG | + | chr5_2:52034844-52034863 | None:intergenic | 40.0% |
| ! | CTCTATTCTTCTGTCCCTTT+TGG | + | chr5_2:52034978-52034997 | None:intergenic | 40.0% |
| AACACAAGCCAAATGGAGAA+TGG | - | chr5_2:52035017-52035036 | Msa0775220:intron | 40.0% | |
| TGTGAGAAACTTGAGGAACA+AGG | - | chr5_2:52035080-52035099 | Msa0775220:intron | 40.0% | |
| TGTATGTGATCTATCCGATG+TGG | - | chr5_2:52035435-52035454 | Msa0775220:intron | 40.0% | |
| GTATGTGATCTATCCGATGT+GGG | - | chr5_2:52035436-52035455 | Msa0775220:intron | 40.0% | |
| TATGTGATCTATCCGATGTG+GGG | - | chr5_2:52035437-52035456 | Msa0775220:intron | 40.0% | |
| TCTATCCAATATGTGGGACT+TGG | - | chr5_2:52035526-52035545 | Msa0775220:intron | 40.0% | |
| AAACACCAAGTCCCACATAT+TGG | + | chr5_2:52035534-52035553 | None:intergenic | 40.0% | |
| CAAGTGTGGCAATAGAAAGT+TGG | + | chr5_2:52035563-52035582 | None:intergenic | 40.0% | |
| TTGAAAAATGGAAAGGAGCC+TGG | - | chr5_2:52035655-52035674 | Msa0775220:intron | 40.0% | |
| CTCTTGGCGTTCTTATTCAA+TGG | + | chr5_2:52035694-52035713 | None:intergenic | 40.0% | |
| GATATCGGATATCAATGTGG+AGG | - | chr5_2:52035742-52035761 | Msa0775220:intron | 40.0% | |
| AAGGCTAACCAATTGTGATC+TGG | + | chr5_2:52035798-52035817 | None:intergenic | 40.0% | |
| AACTTCAGGCACAACTATCT+TGG | - | chr5_2:52036015-52036034 | Msa0775220:CDS | 40.0% | |
| GATGCTGTTAAGGAAGTTGT+GGG | - | chr5_2:52036037-52036056 | Msa0775220:intron | 40.0% | |
| GTAATCCCATTTAATGGAGC+TGG | - | chr5_2:52036190-52036209 | Msa0775220:CDS | 40.0% | |
| TCTGATATCTGGAAGACCTT+TGG | - | chr5_2:52036255-52036274 | Msa0775220:CDS | 40.0% | |
| GGTCTTGGAACAAAGTTTGT+TGG | - | chr5_2:52036276-52036295 | Msa0775220:CDS | 40.0% | |
| ATTCCATTTCCTTCACTACC+GGG | + | chr5_2:52036334-52036353 | None:intergenic | 40.0% | |
| GATTCCATTTCCTTCACTAC+CGG | + | chr5_2:52036335-52036354 | None:intergenic | 40.0% | |
| ! | CTTTGGGGATCATGACTTTA+AGG | - | chr5_2:52036366-52036385 | Msa0775220:five_prime_UTR | 40.0% |
| AGGGTAAACTACCAATGACT+TGG | - | chr5_2:52036386-52036405 | Msa0775220:five_prime_UTR | 40.0% | |
| ACAGCTTGATCAATCTGATG+AGG | - | chr5_2:52036423-52036442 | Msa0775220:five_prime_UTR | 40.0% | |
| CAGCTTGATCAATCTGATGA+GGG | - | chr5_2:52036424-52036443 | Msa0775220:five_prime_UTR | 40.0% | |
| CATAACCAAGAGGGAATAAG+GGG | + | chr5_2:52036468-52036487 | None:intergenic | 40.0% | |
| CCATAACCAAGAGGGAATAA+GGG | + | chr5_2:52036469-52036488 | None:intergenic | 40.0% | |
| CCTTATTCCCTCTTGGTTAT+GGG | - | chr5_2:52036467-52036486 | Msa0775220:five_prime_UTR | 40.0% | |
| GTCATCTGATTGGGCTGATA+TGG | - | chr5_2:52031559-52031578 | Msa0775220:intron | 45.0% | |
| GGTAGACGAGTTTCAGAAGT+TGG | - | chr5_2:52031580-52031599 | Msa0775220:intron | 45.0% | |
| TATGCCTAACCGCGATTCAA+GGG | + | chr5_2:52031606-52031625 | None:intergenic | 45.0% | |
| TTTCCTCACAATGTTGCCCT+CGG | - | chr5_2:52031686-52031705 | Msa0775220:intron | 45.0% | |
| GACTGATACAGTCACAATGG+TGG | - | chr5_2:52031852-52031871 | Msa0775220:CDS | 45.0% | |
| ! | TGATGTCGTGGTCACGTTTT+CGG | - | chr5_2:52031911-52031930 | Msa0775220:intron | 45.0% |
| TCTCCTTCAAAGTTCGTGGA+AGG | + | chr5_2:52031982-52032001 | None:intergenic | 45.0% | |
| CTCTAGACAGTGCAGTATAC+GGG | + | chr5_2:52032231-52032250 | None:intergenic | 45.0% | |
| ! | GCTCTAGACAGTGCAGTATA+CGG | + | chr5_2:52032232-52032251 | None:intergenic | 45.0% |
| CTTTACTTGTGCTCCTTGTG+TGG | - | chr5_2:52032458-52032477 | Msa0775220:intron | 45.0% | |
| CACTCACCTCATTCGCAAAA+AGG | - | chr5_2:52032815-52032834 | Msa0775220:intron | 45.0% | |
| TCTCTTGTGTACAAACTCCG+GGG | + | chr5_2:52032957-52032976 | None:intergenic | 45.0% | |
| CTCTCTTGTGTACAAACTCC+GGG | + | chr5_2:52032958-52032977 | None:intergenic | 45.0% | |
| !! | AGAAGAATGGGATTGGTCCT+AGG | + | chr5_2:52033043-52033062 | None:intergenic | 45.0% |
| TCATAGCATCTTCCCCATCT+GGG | + | chr5_2:52033382-52033401 | None:intergenic | 45.0% | |
| ! | TTGGATGTCTTTCTGGAGGT+TGG | + | chr5_2:52033468-52033487 | None:intergenic | 45.0% |
| AACCTCCAGAAAGACATCCA+AGG | - | chr5_2:52033467-52033486 | Msa0775220:intron | 45.0% | |
| ACCTCCAGAAAGACATCCAA+GGG | - | chr5_2:52033468-52033487 | Msa0775220:intron | 45.0% | |
| GATCCACATGACTCCTTATG+TGG | - | chr5_2:52033908-52033927 | Msa0775220:intron | 45.0% | |
| TGGAATGGAGTCAAACTCCA+TGG | - | chr5_2:52033978-52033997 | Msa0775220:intron | 45.0% | |
| TAAGACCAATGCTCCACTGT+AGG | - | chr5_2:52034129-52034148 | Msa0775220:CDS | 45.0% | |
| AAGACCAATGCTCCACTGTA+GGG | - | chr5_2:52034130-52034149 | Msa0775220:CDS | 45.0% | |
| AAAACCCTACAGTGGAGCAT+TGG | + | chr5_2:52034137-52034156 | None:intergenic | 45.0% | |
| CACTCTTAAGATCCGCTCTA+CGG | + | chr5_2:52034431-52034450 | None:intergenic | 45.0% | |
| ! | GCTGGATATTGTTGGTTGCA+AGG | - | chr5_2:52034498-52034517 | Msa0775220:intron | 45.0% |
| CAACCCGATAATCTCTTCGA+TGG | + | chr5_2:52034751-52034770 | None:intergenic | 45.0% | |
| GTAAAACTTGGGGAGCAAGT+TGG | - | chr5_2:52035139-52035158 | Msa0775220:CDS | 45.0% | |
| TGAAGCAGTTCGAAAGTCCT+TGG | - | chr5_2:52035627-52035646 | Msa0775220:intron | 45.0% | |
| TCCAGCAACAAGGATTCTCT+TGG | + | chr5_2:52035710-52035729 | None:intergenic | 45.0% | |
| TAGCATGAGTTCCAGCAACA+AGG | + | chr5_2:52035720-52035739 | None:intergenic | 45.0% | |
| TCGGATATCAATGTGGAGGA+TGG | - | chr5_2:52035746-52035765 | Msa0775220:intron | 45.0% | |
| TCTAGTGGCCAGATCACAAT+TGG | - | chr5_2:52035787-52035806 | Msa0775220:intron | 45.0% | |
| GGATGCTGTTAAGGAAGTTG+TGG | - | chr5_2:52036036-52036055 | Msa0775220:intron | 45.0% | |
| ATCTGGAAGACCTTTGGTCT+TGG | - | chr5_2:52036261-52036280 | Msa0775220:CDS | 45.0% | |
| CCCTTATTCCCTCTTGGTTA+TGG | - | chr5_2:52036466-52036485 | Msa0775220:five_prime_UTR | 45.0% | |
| CCCATAACCAAGAGGGAATA+AGG | + | chr5_2:52036470-52036489 | None:intergenic | 45.0% | |
| AAGCTAGCCCATAACCAAGA+GGG | + | chr5_2:52036477-52036496 | None:intergenic | 45.0% | |
| TAAGCTAGCCCATAACCAAG+AGG | + | chr5_2:52036478-52036497 | None:intergenic | 45.0% | |
| TCGAGCTTCAACCGTTTCAG+CGG | + | chr5_2:52031288-52031307 | None:intergenic | 50.0% | |
| AGAAGTTGGCCCTTGAATCG+CGG | - | chr5_2:52031594-52031613 | Msa0775220:intron | 50.0% | |
| GTATGCCTAACCGCGATTCA+AGG | + | chr5_2:52031607-52031626 | None:intergenic | 50.0% | |
| ! | GCATCGGTCCCATAGATGAT+TGG | + | chr5_2:52031629-52031648 | None:intergenic | 50.0% |
| TATGGGACCGATGCTGTTCA+TGG | - | chr5_2:52031635-52031654 | Msa0775220:intron | 50.0% | |
| AGCGACACAACATGTTAGGC+AGG | + | chr5_2:52033255-52033274 | None:intergenic | 50.0% | |
| AGGTCTGCAAAGATCCCAGA+TGG | - | chr5_2:52033365-52033384 | Msa0775220:CDS | 50.0% | |
| GGTCTGCAAAGATCCCAGAT+GGG | - | chr5_2:52033366-52033385 | Msa0775220:CDS | 50.0% | |
| GTCTGCAAAGATCCCAGATG+GGG | - | chr5_2:52033367-52033386 | Msa0775220:CDS | 50.0% | |
| CTCATAGCATCTTCCCCATC+TGG | + | chr5_2:52033383-52033402 | None:intergenic | 50.0% | |
| CCTCCAGAAAGACATCCAAG+GGG | - | chr5_2:52033469-52033488 | Msa0775220:intron | 50.0% | |
| TAGCCCCTTGGATGTCTTTC+TGG | + | chr5_2:52033475-52033494 | None:intergenic | 50.0% | |
| ! | GGAGATGGAGGCACAGAAAA+AGG | - | chr5_2:52033840-52033859 | Msa0775220:intron | 50.0% |
| GAGTTTGACTCCATTCCAGC+TGG | + | chr5_2:52033976-52033995 | None:intergenic | 50.0% | |
| !! | CAGGGGAAGTACCAATATCC+AGG | - | chr5_2:52034395-52034414 | Msa0775220:intron | 50.0% |
| CTCTACGGCATCATCAATCC+TGG | + | chr5_2:52034416-52034435 | None:intergenic | 50.0% | |
| !! | GGATTGATGATGCCGTAGAG+CGG | - | chr5_2:52034416-52034435 | Msa0775220:intron | 50.0% |
| GCCAAGAGAATCCTTGTTGC+TGG | - | chr5_2:52035706-52035725 | Msa0775220:intron | 50.0% | |
| ACCTCCACACTCAGCATATG+GGG | + | chr5_2:52036155-52036174 | None:intergenic | 50.0% | |
| CACCTCCACACTCAGCATAT+GGG | + | chr5_2:52036156-52036175 | None:intergenic | 50.0% | |
| TCACCTCCACACTCAGCATA+TGG | + | chr5_2:52036157-52036176 | None:intergenic | 50.0% | |
| CAGAAGCTCTTGTAGCAGCA+TGG | - | chr5_2:52036305-52036324 | Msa0775220:five_prime_UTR | 50.0% | |
| TTGCCCGGTAGTGAAGGAAA+TGG | - | chr5_2:52036328-52036347 | Msa0775220:five_prime_UTR | 50.0% | |
| GATGACCCCTTATTCCCTCT+TGG | - | chr5_2:52036460-52036479 | Msa0775220:five_prime_UTR | 50.0% | |
| CGAGCTTCAACCGTTTCAGC+GGG | + | chr5_2:52031287-52031306 | None:intergenic | 55.0% | |
| TTGGCCCTTGAATCGCGGTT+AGG | - | chr5_2:52031599-52031618 | Msa0775220:intron | 55.0% | |
| ATGTTGCCCTCGGAGCTACA+AGG | - | chr5_2:52031696-52031715 | Msa0775220:intron | 55.0% | |
| CACCAACCTTGTAGCTCCGA+GGG | + | chr5_2:52031705-52031724 | None:intergenic | 55.0% | |
| GTGCTCCTTGTGTGGCTGTA+AGG | - | chr5_2:52032466-52032485 | Msa0775220:intron | 55.0% | |
| CGATGCCTTACAGCCACACA+AGG | + | chr5_2:52032474-52032493 | None:intergenic | 55.0% | |
| CCCCTTGGATGTCTTTCTGG+AGG | + | chr5_2:52033472-52033491 | None:intergenic | 55.0% | |
| TCCAAGGGGCTACCCATTTG+TGG | - | chr5_2:52033483-52033502 | Msa0775220:intron | 55.0% | |
| CCTACCTCCCAGCCACAAAT+GGG | + | chr5_2:52033498-52033517 | None:intergenic | 55.0% | |
| GTAGCCCCATATGCTGAGTG+TGG | - | chr5_2:52036148-52036167 | Msa0775220:intron | 55.0% | |
| CTTGTAGCAGCATGGTTGCC+CGG | - | chr5_2:52036313-52036332 | Msa0775220:five_prime_UTR | 55.0% | |
| GCTCCGAGGGCAACATTGTG+AGG | + | chr5_2:52031692-52031711 | None:intergenic | 60.0% | |
| TGCCCTCGGAGCTACAAGGT+TGG | - | chr5_2:52031700-52031719 | Msa0775220:intron | 60.0% | |
| CCACCAACCTTGTAGCTCCG+AGG | + | chr5_2:52031706-52031725 | None:intergenic | 60.0% | |
| CCTCGGAGCTACAAGGTTGG+TGG | - | chr5_2:52031703-52031722 | Msa0775220:intron | 60.0% | |
| GCCACAAATGGGTAGCCCCT+TGG | + | chr5_2:52033487-52033506 | None:intergenic | 60.0% | |
| AGGGGCTACCCATTTGTGGC+TGG | - | chr5_2:52033487-52033506 | Msa0775220:intron | 60.0% | |
| GGGGCTACCCATTTGTGGCT+GGG | - | chr5_2:52033488-52033507 | Msa0775220:intron | 60.0% | |
| GCTACCCATTTGTGGCTGGG+AGG | - | chr5_2:52033491-52033510 | Msa0775220:intron | 60.0% | |
| CCCATTTGTGGCTGGGAGGT+AGG | - | chr5_2:52033495-52033514 | Msa0775220:intron | 60.0% | |
| GCCTACCTCCCAGCCACAAA+TGG | + | chr5_2:52033499-52033518 | None:intergenic | 60.0% | |
| GCCCCATATGCTGAGTGTGG+AGG | - | chr5_2:52036151-52036170 | Msa0775220:CDS | 60.0% | |
| GCATGGTTGCCCGGTAGTGA+AGG | - | chr5_2:52036322-52036341 | Msa0775220:five_prime_UTR | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 52031060 | 52036504 | 52031060 | ID=Msa0775220;Name=Msa0775220 |
| chr5_2 | mRNA | 52031060 | 52036504 | 52031060 | ID=Msa0775220-mRNA-1;Parent=Msa0775220;Name=Msa0775220-mRNA-1;_AED=0.12;_eAED=0.12;_QI=203|0.75|0.44|1|0.87|0.77|9|0|539 |
| chr5_2 | exon | 52031060 | 52031541 | 52031060 | ID=Msa0775220-mRNA-1:exon:15523;Parent=Msa0775220-mRNA-1 |
| chr5_2 | exon | 52031756 | 52031894 | 52031756 | ID=Msa0775220-mRNA-1:exon:15522;Parent=Msa0775220-mRNA-1 |
| chr5_2 | exon | 52033177 | 52033227 | 52033177 | ID=Msa0775220-mRNA-1:exon:15521;Parent=Msa0775220-mRNA-1 |
| chr5_2 | exon | 52033309 | 52033413 | 52033309 | ID=Msa0775220-mRNA-1:exon:15520;Parent=Msa0775220-mRNA-1 |
| chr5_2 | exon | 52033515 | 52033758 | 52033515 | ID=Msa0775220-mRNA-1:exon:15519;Parent=Msa0775220-mRNA-1 |
| chr5_2 | exon | 52034052 | 52034197 | 52034052 | ID=Msa0775220-mRNA-1:exon:15518;Parent=Msa0775220-mRNA-1 |
| chr5_2 | exon | 52035082 | 52035172 | 52035082 | ID=Msa0775220-mRNA-1:exon:15517;Parent=Msa0775220-mRNA-1 |
| chr5_2 | exon | 52035847 | 52036054 | 52035847 | ID=Msa0775220-mRNA-1:exon:15516;Parent=Msa0775220-mRNA-1 |
| chr5_2 | exon | 52036151 | 52036504 | 52036151 | ID=Msa0775220-mRNA-1:exon:15515;Parent=Msa0775220-mRNA-1 |
| chr5_2 | five_prime_UTR | 52036302 | 52036504 | 52036302 | ID=Msa0775220-mRNA-1:five_prime_utr;Parent=Msa0775220-mRNA-1 |
| chr5_2 | CDS | 52036151 | 52036301 | 52036151 | ID=Msa0775220-mRNA-1:cds;Parent=Msa0775220-mRNA-1 |
| chr5_2 | CDS | 52035847 | 52036054 | 52035847 | ID=Msa0775220-mRNA-1:cds;Parent=Msa0775220-mRNA-1 |
| chr5_2 | CDS | 52035082 | 52035172 | 52035082 | ID=Msa0775220-mRNA-1:cds;Parent=Msa0775220-mRNA-1 |
| chr5_2 | CDS | 52034052 | 52034197 | 52034052 | ID=Msa0775220-mRNA-1:cds;Parent=Msa0775220-mRNA-1 |
| chr5_2 | CDS | 52033515 | 52033758 | 52033515 | ID=Msa0775220-mRNA-1:cds;Parent=Msa0775220-mRNA-1 |
| chr5_2 | CDS | 52033309 | 52033413 | 52033309 | ID=Msa0775220-mRNA-1:cds;Parent=Msa0775220-mRNA-1 |
| chr5_2 | CDS | 52033177 | 52033227 | 52033177 | ID=Msa0775220-mRNA-1:cds;Parent=Msa0775220-mRNA-1 |
| chr5_2 | CDS | 52031756 | 52031894 | 52031756 | ID=Msa0775220-mRNA-1:cds;Parent=Msa0775220-mRNA-1 |
| chr5_2 | CDS | 52031060 | 52031541 | 52031060 | ID=Msa0775220-mRNA-1:cds;Parent=Msa0775220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
