AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1297080


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1297080 MtrunA17_Chr4g0054101 93.162 468 28 3 1 467 1 465 0.0 879
Msa1297080 MtrunA17_Chr4g0002031 92.350 366 24 3 1 365 1 363 0.0 671
Msa1297080 MtrunA17_Chr5g0401101 66.667 477 143 7 1 468 1 470 0.0 650
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1297080 AT3G49880.1 64.043 470 143 7 3 461 4 458 0.0 610
Msa1297080 AT5G67540.2 62.900 469 146 8 12 461 12 471 0.0 598
Msa1297080 AT5G67540.3 62.900 469 146 8 12 461 34 493 0.0 597
Msa1297080 AT5G67540.1 63.191 470 142 10 12 461 8 466 0.0 596

Find 102 sgRNAs with CRISPR-Local

Find 324 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTCAGCTGAGACAATCTT+AGG 0.186965 8_3:-57013148 Msa1297080:CDS
ACTGCTACCCTGGGAGAATT+TGG 0.201745 8_3:-57014633 Msa1297080:CDS
AAATTTCAAATACTTATTAT+TGG 0.207042 8_3:-57014555 Msa1297080:CDS
TCCTGGTTTGTTTATCTTCA+TGG 0.221019 8_3:-57013023 Msa1297080:CDS
CTATGTCACTAGTAATAATA+TGG 0.224189 8_3:-57014957 Msa1297080:CDS
GCTATTCTTCTAAGGATCTA+TGG 0.248673 8_3:-57013651 Msa1297080:CDS
TTGCAACGAAAATTCGTAAT+TGG 0.249294 8_3:+57015000 None:intergenic
ACCATTGGTTGATGAATTCT+TGG 0.278506 8_3:-57014755 Msa1297080:CDS
TTTCAACTTGTTGGAGTTGA+TGG 0.278724 8_3:+57014839 None:intergenic
GGCCAAGAGTTTCTATCTAT+TGG 0.280101 8_3:-57012889 Msa1297080:CDS
TTCTCATTGTAAATAACTTT+TGG 0.283365 8_3:+57013544 None:intergenic
CTTCCTTTACCTAAGTTTCC+TGG 0.285443 8_3:-57013040 Msa1297080:CDS
TTTGATATCCATGCGGTCTT+TGG 0.289529 8_3:+57013410 None:intergenic
AGTTGGTTGCTATTCTTCTA+AGG 0.296029 8_3:-57013659 Msa1297080:CDS
AGTCAACTATGGTTGCAATT+TGG 0.297105 8_3:+57015224 None:intergenic
ATATGGGGTTTATTAATCTT+AGG 0.298477 8_3:-57014940 Msa1297080:CDS
ACACTCACCTGGAACTTTAT+AGG 0.333849 8_3:+57015169 None:intergenic
ATTGATCCAATGAAGACTAT+AGG 0.340719 8_3:-57014682 Msa1297080:CDS
CCTTTCCCTATAGTCTTCAT+TGG 0.349246 8_3:+57014676 None:intergenic
GAAGATCAAGCACTTCAATA+TGG 0.356355 8_3:-57012929 Msa1297080:CDS
CTCCATCAGGTGGACATTAT+AGG 0.359766 8_3:-57013682 Msa1297080:intron
ATTCTCTCCTATAAAGTTCC+AGG 0.361333 8_3:-57015176 Msa1297080:intron
TGGTTGCCTTTGATTGTTGA+TGG 0.375658 8_3:-57012956 Msa1297080:CDS
TTATCTTCATGGCGGATAGA+TGG 0.376808 8_3:-57013012 Msa1297080:CDS
TAAGAGATTCAAGATATGTT+TGG 0.401561 8_3:-57012976 Msa1297080:CDS
TTGATCCAATGAAGACTATA+GGG 0.410737 8_3:-57014681 Msa1297080:CDS
CTTGAATCTCTTAACTCACT+TGG 0.414129 8_3:+57012986 None:intergenic
CCTTTGTGTTTGAACATAGC+CGG 0.433704 8_3:+57013229 None:intergenic
TCAAATACTTATTATTGGTA+TGG 0.434316 8_3:-57014550 Msa1297080:CDS
AGGAGGATGAATGATATTGA+AGG 0.445423 8_3:+57014879 None:intergenic
TTAGGGACATGGGAAACAAT+TGG 0.448046 8_3:-57013130 Msa1297080:CDS
TTATTATGAGCAAGGTAAGT+AGG 0.456459 8_3:+57014511 None:intergenic
TGGCTACCAAGGTATTTGAA+TGG 0.456566 8_3:+57013430 None:intergenic
TATTGTTGAGTAGTCAACTA+TGG 0.457052 8_3:+57015213 None:intergenic
TATGTCACTAGTAATAATAT+GGG 0.459282 8_3:-57014956 Msa1297080:CDS
ATTGCGGATTGATCTGCCCT+CGG 0.466490 8_3:+57015247 None:intergenic
ATAAACAAACCAGGAAACTT+AGG 0.469675 8_3:+57013031 None:intergenic
CACCCTCCATGAGCTTGAAT+AGG 0.470225 8_3:+57014592 None:intergenic
AGTTATAATTACTGCTACCC+TGG 0.470470 8_3:-57014643 Msa1297080:CDS
AGAATTTGGTTTGATACTGA+TGG 0.474131 8_3:-57014619 Msa1297080:CDS
TCAACTCCAACAAGTTGAAA+AGG 0.485321 8_3:-57014836 Msa1297080:CDS
TTGCGGATTGATCTGCCCTC+GGG 0.491491 8_3:+57015248 None:intergenic
ACATATTACATGGTTACATC+AGG 0.501941 8_3:-57013205 Msa1297080:CDS
GTCCTTTGTTATTATGAGCA+AGG 0.505074 8_3:+57014503 None:intergenic
GGAAATCCTATTCAAGCTCA+TGG 0.506131 8_3:-57014598 Msa1297080:CDS
CAGGTGGACATTATAGGAGT+TGG 0.509259 8_3:-57013676 Msa1297080:CDS
GAATGAACAAGTGCTTCATT+TGG 0.511215 8_3:+57013166 None:intergenic
ATGGTTACATCAGGTTGCAC+TGG 0.512390 8_3:-57013196 Msa1297080:CDS
GACCGCATGGATATCAAAGC+CGG 0.513956 8_3:-57013405 Msa1297080:CDS
AATGGAAACTGCCTTTGGGT+TGG 0.518583 8_3:-57012859 Msa1297080:CDS
CTGAGACAATCTTAGGGACA+TGG 0.522359 8_3:-57013141 Msa1297080:CDS
TTACATCAGGTTGCACTGGA+TGG 0.529710 8_3:-57013192 Msa1297080:CDS
TATTATGAGCAAGGTAAGTA+GGG 0.532830 8_3:+57014512 None:intergenic
AAACCAGGAAACTTAGGTAA+AGG 0.536263 8_3:+57013037 None:intergenic
TACATCAGGTTGCACTGGAT+GGG 0.537898 8_3:-57013191 Msa1297080:CDS
CTTTGAAAAGTGTCATGTCC+CGG 0.538558 8_3:+57013386 None:intergenic
GGTGTTATTGACTTGCTTTG+AGG 0.541852 8_3:+57014775 None:intergenic
TGCCAATAGATAGAAACTCT+TGG 0.542445 8_3:+57012887 None:intergenic
TGGAAATGAGAAGGAAGAGA+AGG 0.543749 8_3:+57014859 None:intergenic
TGGTATGGTGAATATAAAGA+TGG 0.548966 8_3:-57014535 Msa1297080:CDS
AAATGAGAAGGAAGAGAAGG+AGG 0.550677 8_3:+57014862 None:intergenic
TCATGTCCATCAACAATCAA+AGG 0.551449 8_3:+57012950 None:intergenic
ATTGGAAATCCATGTGTTGG+TGG 0.555806 8_3:-57013112 Msa1297080:CDS
AAGCAAGTCAATAACACCAT+TGG 0.559003 8_3:-57014770 Msa1297080:CDS
ATTCAGCTGAGACAATCTTA+GGG 0.560376 8_3:-57013147 Msa1297080:CDS
TGAAAGTGACTTACACGAGC+AGG 0.561123 8_3:+57014481 None:intergenic
GTATCAAACCAAATTCTCCC+AGG 0.563269 8_3:+57014625 None:intergenic
TATGGTTGCAATTTGGATTG+CGG 0.564541 8_3:+57015231 None:intergenic
CTTCTAAGGATCTATGGACC+TGG 0.567240 8_3:-57013645 Msa1297080:CDS
ATAGGAGAGAATGAATGAGT+TGG 0.575613 8_3:+57015187 None:intergenic
GTTATAATTACTGCTACCCT+GGG 0.579486 8_3:-57014642 Msa1297080:CDS
ACCGGTCCATTCAAATACCT+TGG 0.583019 8_3:-57013436 Msa1297080:CDS
TTGAGATAATCTTCAGTCAA+GGG 0.584839 8_3:+57013301 None:intergenic
ACCAAGGTATTTGAATGGAC+CGG 0.587941 8_3:+57013435 None:intergenic
AGGATGAATGATATTGAAGG+AGG 0.591474 8_3:+57014882 None:intergenic
TTGAATGTGTTCCAACCCAA+AGG 0.592407 8_3:+57012848 None:intergenic
ATTGAGATAATCTTCAGTCA+AGG 0.592919 8_3:+57013300 None:intergenic
GAAAACAATGTAATGCACAT+TGG 0.594015 8_3:-57013325 Msa1297080:CDS
ACCGCATGGATATCAAAGCC+GGG 0.595132 8_3:-57013404 Msa1297080:CDS
CGGTCAGCGAAGAGAAGCGC+CGG 0.596526 8_3:-57013248 Msa1297080:CDS
CATGCGGTCTTTGGCTACCA+AGG 0.596927 8_3:+57013419 None:intergenic
GCATTCAGTGATACTCCTAC+CGG 0.598208 8_3:-57013454 Msa1297080:CDS
CCAATGAAGACTATAGGGAA+AGG 0.603987 8_3:-57014676 Msa1297080:CDS
TACCTTGCTCATAATAACAA+AGG 0.607221 8_3:-57014505 Msa1297080:CDS
ACACAAAGGAACATATTACA+TGG 0.610656 8_3:-57013215 Msa1297080:CDS
ATCCTATTCAAGCTCATGGA+GGG 0.611296 8_3:-57014594 Msa1297080:CDS
CTTGGTAGCCAAAGACCGCA+TGG 0.613799 8_3:-57013418 Msa1297080:CDS
AAACAAGAAAGTATGTGATG+TGG 0.618490 8_3:-57013522 Msa1297080:CDS
TGAGACAATCTTAGGGACAT+GGG 0.620421 8_3:-57013140 Msa1297080:CDS
TCCAAGAATTCATCAACCAA+TGG 0.620834 8_3:+57014754 None:intergenic
ATCACTGAATGCTATGCCGA+CGG 0.621301 8_3:+57013465 None:intergenic
TGGAGTTGATGGAAATGAGA+AGG 0.629494 8_3:+57014850 None:intergenic
ACAATTGGAAATCCATGTGT+TGG 0.635790 8_3:-57013115 Msa1297080:CDS
TATCAAACCAAATTCTCCCA+GGG 0.640052 8_3:+57014626 None:intergenic
ATGTCACTAGTAATAATATG+GGG 0.640588 8_3:-57014955 Msa1297080:CDS
TGGTTTGTTTATCTTCATGG+CGG 0.648154 8_3:-57013020 Msa1297080:CDS
AGGTATTTGAATGGACCGGT+AGG 0.664578 8_3:+57013439 None:intergenic
CCGGCTATGTTCAAACACAA+AGG 0.678714 8_3:-57013229 Msa1297080:CDS
AATTACGCAAAAGCTTCCGT+CGG 0.686419 8_3:-57013481 Msa1297080:CDS
AATCCTATTCAAGCTCATGG+AGG 0.687704 8_3:-57014595 Msa1297080:CDS
GCCATGAAGATAAACAAACC+AGG 0.690008 8_3:+57013022 None:intergenic
TCCCGGCTTTGATATCCATG+CGG 0.711426 8_3:+57013403 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTTCAAATACTTATTAT+TGG - chr8_3:57013536-57013555 Msa1297080:CDS 10.0%
!! AAATTTCAAATACTTATTAT+TGG - chr8_3:57013536-57013555 Msa1297080:CDS 10.0%
!! GTAAAATGTAAGTTATAATA+AGG + chr8_3:57013829-57013848 None:intergenic 15.0%
!! GTAAAATGTAAGTTATAATA+AGG + chr8_3:57013829-57013848 None:intergenic 15.0%
!! TATGTCACTAGTAATAATAT+GGG - chr8_3:57013135-57013154 Msa1297080:CDS 20.0%
!! TCAAATACTTATTATTGGTA+TGG - chr8_3:57013541-57013560 Msa1297080:CDS 20.0%
!! TAACATACTTCTATAACAAA+AGG + chr8_3:57013851-57013870 None:intergenic 20.0%
!!! ATTAAGTTGTTTATTCAATC+AGG - chr8_3:57013900-57013919 Msa1297080:intron 20.0%
!!! TTAAGTTGTTTATTCAATCA+GGG - chr8_3:57013901-57013920 Msa1297080:intron 20.0%
!! ATGAAAAGAACATTTGATAT+GGG + chr8_3:57013971-57013990 None:intergenic 20.0%
!!! TTCTCATTGTAAATAACTTT+TGG + chr8_3:57014550-57014569 None:intergenic 20.0%
!! TATGTCACTAGTAATAATAT+GGG - chr8_3:57013135-57013154 Msa1297080:CDS 20.0%
!! TCAAATACTTATTATTGGTA+TGG - chr8_3:57013541-57013560 Msa1297080:CDS 20.0%
!! TAACATACTTCTATAACAAA+AGG + chr8_3:57013851-57013870 None:intergenic 20.0%
!!! ATTAAGTTGTTTATTCAATC+AGG - chr8_3:57013900-57013919 Msa1297080:intron 20.0%
!!! TTAAGTTGTTTATTCAATCA+GGG - chr8_3:57013901-57013920 Msa1297080:intron 20.0%
!! ATGAAAAGAACATTTGATAT+GGG + chr8_3:57013971-57013990 None:intergenic 20.0%
!!! TTCTCATTGTAAATAACTTT+TGG + chr8_3:57014550-57014569 None:intergenic 20.0%
! CTATGTCACTAGTAATAATA+TGG - chr8_3:57013134-57013153 Msa1297080:CDS 25.0%
! ATGTCACTAGTAATAATATG+GGG - chr8_3:57013136-57013155 Msa1297080:CDS 25.0%
! ATATGGGGTTTATTAATCTT+AGG - chr8_3:57013151-57013170 Msa1297080:CDS 25.0%
!!! CTTATTTTTATAAGCTCTTC+AGG - chr8_3:57013787-57013806 Msa1297080:intron 25.0%
! GATGAAAAGAACATTTGATA+TGG + chr8_3:57013972-57013991 None:intergenic 25.0%
! ATCCAATTCAAAGTTTCTTA+TGG - chr8_3:57013989-57014008 Msa1297080:intron 25.0%
! AACCATAAGAAACTTTGAAT+TGG + chr8_3:57013994-57014013 None:intergenic 25.0%
!!! AAAACTTCAATTGATAATGG+TGG + chr8_3:57014211-57014230 None:intergenic 25.0%
! CCAAAAACTTCAATTGATAA+TGG + chr8_3:57014214-57014233 None:intergenic 25.0%
!! CCATTATCAATTGAAGTTTT+TGG - chr8_3:57014211-57014230 Msa1297080:intron 25.0%
! GGAAATTGTATTTGTTTCAT+AGG - chr8_3:57014237-57014256 Msa1297080:intron 25.0%
!! ATCAAATGCAAATACTGTTT+TGG - chr8_3:57014355-57014374 Msa1297080:intron 25.0%
! TAAGAGATTCAAGATATGTT+TGG - chr8_3:57015115-57015134 Msa1297080:intron 25.0%
!!! ATGGTTTTGATAACACATTT+TGG - chr8_3:57015181-57015200 Msa1297080:five_prime_UTR 25.0%
! CTATCTATTGGCATAAAAAA+TGG - chr8_3:57015214-57015233 Msa1297080:five_prime_UTR 25.0%
! CTATGTCACTAGTAATAATA+TGG - chr8_3:57013134-57013153 Msa1297080:CDS 25.0%
! ATGTCACTAGTAATAATATG+GGG - chr8_3:57013136-57013155 Msa1297080:CDS 25.0%
! ATATGGGGTTTATTAATCTT+AGG - chr8_3:57013151-57013170 Msa1297080:CDS 25.0%
!!! CTTATTTTTATAAGCTCTTC+AGG - chr8_3:57013787-57013806 Msa1297080:intron 25.0%
! GATGAAAAGAACATTTGATA+TGG + chr8_3:57013972-57013991 None:intergenic 25.0%
! ATCCAATTCAAAGTTTCTTA+TGG - chr8_3:57013989-57014008 Msa1297080:intron 25.0%
! AACCATAAGAAACTTTGAAT+TGG + chr8_3:57013994-57014013 None:intergenic 25.0%
!!! AAAACTTCAATTGATAATGG+TGG + chr8_3:57014211-57014230 None:intergenic 25.0%
! CCAAAAACTTCAATTGATAA+TGG + chr8_3:57014214-57014233 None:intergenic 25.0%
!! CCATTATCAATTGAAGTTTT+TGG - chr8_3:57014211-57014230 Msa1297080:intron 25.0%
! GGAAATTGTATTTGTTTCAT+AGG - chr8_3:57014237-57014256 Msa1297080:intron 25.0%
!! ATCAAATGCAAATACTGTTT+TGG - chr8_3:57014355-57014374 Msa1297080:intron 25.0%
! TAAGAGATTCAAGATATGTT+TGG - chr8_3:57015115-57015134 Msa1297080:intron 25.0%
!!! ATGGTTTTGATAACACATTT+TGG - chr8_3:57015181-57015200 Msa1297080:five_prime_UTR 25.0%
! CTATCTATTGGCATAAAAAA+TGG - chr8_3:57015214-57015233 Msa1297080:five_prime_UTR 25.0%
TATTGTTGAGTAGTCAACTA+TGG + chr8_3:57012881-57012900 None:intergenic 30.0%
TTGCAACGAAAATTCGTAAT+TGG + chr8_3:57013094-57013113 None:intergenic 30.0%
!!! TCAATAGCACTTGTTTTATG+AGG + chr8_3:57013394-57013413 None:intergenic 30.0%
ATTGATCCAATGAAGACTAT+AGG - chr8_3:57013409-57013428 Msa1297080:CDS 30.0%
TTGATCCAATGAAGACTATA+GGG - chr8_3:57013410-57013429 Msa1297080:CDS 30.0%
!! AGAATTTGGTTTGATACTGA+TGG - chr8_3:57013472-57013491 Msa1297080:CDS 30.0%
TGGTATGGTGAATATAAAGA+TGG - chr8_3:57013556-57013575 Msa1297080:CDS 30.0%
TATTATGAGCAAGGTAAGTA+GGG + chr8_3:57013582-57013601 None:intergenic 30.0%
TTATTATGAGCAAGGTAAGT+AGG + chr8_3:57013583-57013602 None:intergenic 30.0%
TACCTTGCTCATAATAACAA+AGG - chr8_3:57013586-57013605 Msa1297080:CDS 30.0%
CTTATCTACTGACATGAATA+CGG - chr8_3:57013701-57013720 Msa1297080:intron 30.0%
AAAGCATATACACATGTCAT+AGG + chr8_3:57013758-57013777 None:intergenic 30.0%
!!! TATCAATTGAAGTTTTTGGC+AGG - chr8_3:57014215-57014234 Msa1297080:intron 30.0%
!!! ATCAATTGAAGTTTTTGGCA+GGG - chr8_3:57014216-57014235 Msa1297080:intron 30.0%
TTTGTTTCATAGGACTAATG+TGG - chr8_3:57014247-57014266 Msa1297080:intron 30.0%
! TGAGATATAGACTAGAGTTT+TGG + chr8_3:57014381-57014400 None:intergenic 30.0%
!!! TACAATACCTTCTTTTTTCC+AGG + chr8_3:57014467-57014486 None:intergenic 30.0%
! AAACAAGAAAGTATGTGATG+TGG - chr8_3:57014569-57014588 Msa1297080:CDS 30.0%
GAAAACAATGTAATGCACAT+TGG - chr8_3:57014766-57014785 Msa1297080:CDS 30.0%
TTGAGATAATCTTCAGTCAA+GGG + chr8_3:57014793-57014812 None:intergenic 30.0%
ATTGAGATAATCTTCAGTCA+AGG + chr8_3:57014794-57014813 None:intergenic 30.0%
! GTCATGAAAAGAATTTTCGT+CGG - chr8_3:57014823-57014842 Msa1297080:CDS 30.0%
ACACAAAGGAACATATTACA+TGG - chr8_3:57014876-57014895 Msa1297080:CDS 30.0%
ACATATTACATGGTTACATC+AGG - chr8_3:57014886-57014905 Msa1297080:CDS 30.0%
ATAAACAAACCAGGAAACTT+AGG + chr8_3:57015063-57015082 None:intergenic 30.0%
TAAAAAATGGAAACTGCCTT+TGG - chr8_3:57015227-57015246 Msa1297080:five_prime_UTR 30.0%
AAAAAATGGAAACTGCCTTT+GGG - chr8_3:57015228-57015247 Msa1297080:five_prime_UTR 30.0%
TATTGTTGAGTAGTCAACTA+TGG + chr8_3:57012881-57012900 None:intergenic 30.0%
TTGCAACGAAAATTCGTAAT+TGG + chr8_3:57013094-57013113 None:intergenic 30.0%
!!! TCAATAGCACTTGTTTTATG+AGG + chr8_3:57013394-57013413 None:intergenic 30.0%
ATTGATCCAATGAAGACTAT+AGG - chr8_3:57013409-57013428 Msa1297080:CDS 30.0%
TTGATCCAATGAAGACTATA+GGG - chr8_3:57013410-57013429 Msa1297080:CDS 30.0%
!! AGAATTTGGTTTGATACTGA+TGG - chr8_3:57013472-57013491 Msa1297080:CDS 30.0%
TGGTATGGTGAATATAAAGA+TGG - chr8_3:57013556-57013575 Msa1297080:CDS 30.0%
TATTATGAGCAAGGTAAGTA+GGG + chr8_3:57013582-57013601 None:intergenic 30.0%
TTATTATGAGCAAGGTAAGT+AGG + chr8_3:57013583-57013602 None:intergenic 30.0%
TACCTTGCTCATAATAACAA+AGG - chr8_3:57013586-57013605 Msa1297080:CDS 30.0%
CTTATCTACTGACATGAATA+CGG - chr8_3:57013701-57013720 Msa1297080:intron 30.0%
AAAGCATATACACATGTCAT+AGG + chr8_3:57013758-57013777 None:intergenic 30.0%
!!! TATCAATTGAAGTTTTTGGC+AGG - chr8_3:57014215-57014234 Msa1297080:intron 30.0%
!!! ATCAATTGAAGTTTTTGGCA+GGG - chr8_3:57014216-57014235 Msa1297080:intron 30.0%
TTTGTTTCATAGGACTAATG+TGG - chr8_3:57014247-57014266 Msa1297080:intron 30.0%
! TGAGATATAGACTAGAGTTT+TGG + chr8_3:57014381-57014400 None:intergenic 30.0%
!!! TACAATACCTTCTTTTTTCC+AGG + chr8_3:57014467-57014486 None:intergenic 30.0%
! AAACAAGAAAGTATGTGATG+TGG - chr8_3:57014569-57014588 Msa1297080:CDS 30.0%
GAAAACAATGTAATGCACAT+TGG - chr8_3:57014766-57014785 Msa1297080:CDS 30.0%
TTGAGATAATCTTCAGTCAA+GGG + chr8_3:57014793-57014812 None:intergenic 30.0%
ATTGAGATAATCTTCAGTCA+AGG + chr8_3:57014794-57014813 None:intergenic 30.0%
! GTCATGAAAAGAATTTTCGT+CGG - chr8_3:57014823-57014842 Msa1297080:CDS 30.0%
ACACAAAGGAACATATTACA+TGG - chr8_3:57014876-57014895 Msa1297080:CDS 30.0%
ACATATTACATGGTTACATC+AGG - chr8_3:57014886-57014905 Msa1297080:CDS 30.0%
ATAAACAAACCAGGAAACTT+AGG + chr8_3:57015063-57015082 None:intergenic 30.0%
TAAAAAATGGAAACTGCCTT+TGG - chr8_3:57015227-57015246 Msa1297080:five_prime_UTR 30.0%
AAAAAATGGAAACTGCCTTT+GGG - chr8_3:57015228-57015247 Msa1297080:five_prime_UTR 30.0%
TATGGTTGCAATTTGGATTG+CGG + chr8_3:57012863-57012882 None:intergenic 35.0%
AGTCAACTATGGTTGCAATT+TGG + chr8_3:57012870-57012889 None:intergenic 35.0%
ATAGGAGAGAATGAATGAGT+TGG + chr8_3:57012907-57012926 None:intergenic 35.0%
ATTCTCTCCTATAAAGTTCC+AGG - chr8_3:57012915-57012934 Msa1297080:CDS 35.0%
TGTAGAGCTTGAGAAAAATG+AGG - chr8_3:57013047-57013066 Msa1297080:CDS 35.0%
AGGATGAATGATATTGAAGG+AGG + chr8_3:57013212-57013231 None:intergenic 35.0%
AGGAGGATGAATGATATTGA+AGG + chr8_3:57013215-57013234 None:intergenic 35.0%
!! TTTCAACTTGTTGGAGTTGA+TGG + chr8_3:57013255-57013274 None:intergenic 35.0%
! TCAACTCCAACAAGTTGAAA+AGG - chr8_3:57013255-57013274 Msa1297080:CDS 35.0%
! AGTTCTCCTTTTCAACTTGT+TGG + chr8_3:57013264-57013283 None:intergenic 35.0%
AAGCAAGTCAATAACACCAT+TGG - chr8_3:57013321-57013340 Msa1297080:CDS 35.0%
!! ACCATTGGTTGATGAATTCT+TGG - chr8_3:57013336-57013355 Msa1297080:CDS 35.0%
TCCAAGAATTCATCAACCAA+TGG + chr8_3:57013340-57013359 None:intergenic 35.0%
AGTTATAATTACTGCTACCC+TGG - chr8_3:57013448-57013467 Msa1297080:CDS 35.0%
GTTATAATTACTGCTACCCT+GGG - chr8_3:57013449-57013468 Msa1297080:CDS 35.0%
TATCAAACCAAATTCTCCCA+GGG + chr8_3:57013468-57013487 None:intergenic 35.0%
!! GTCCTTTGTTATTATGAGCA+AGG + chr8_3:57013591-57013610 None:intergenic 35.0%
TATAAACTCCTACAACCAAC+TGG + chr8_3:57013939-57013958 None:intergenic 35.0%
AGACATTGGAATTGCTCAAT+TGG + chr8_3:57014160-57014179 None:intergenic 35.0%
TAGTTCAGAACTCAAGACAT+TGG + chr8_3:57014174-57014193 None:intergenic 35.0%
!! TCAATTGATAATGGTGGTGA+TGG + chr8_3:57014205-57014224 None:intergenic 35.0%
! AGTTGGTTGCTATTCTTCTA+AGG - chr8_3:57014432-57014451 Msa1297080:intron 35.0%
! GCTATTCTTCTAAGGATCTA+TGG - chr8_3:57014440-57014459 Msa1297080:intron 35.0%
GAATGAACAAGTGCTTCATT+TGG + chr8_3:57014928-57014947 None:intergenic 35.0%
ATTCAGCTGAGACAATCTTA+GGG - chr8_3:57014944-57014963 Msa1297080:CDS 35.0%
ACAATTGGAAATCCATGTGT+TGG - chr8_3:57014976-57014995 Msa1297080:CDS 35.0%
!! ATTTTGTTTCCACCAACACA+TGG + chr8_3:57014991-57015010 None:intergenic 35.0%
AAACCAGGAAACTTAGGTAA+AGG + chr8_3:57015057-57015076 None:intergenic 35.0%
!! TCCTGGTTTGTTTATCTTCA+TGG - chr8_3:57015068-57015087 Msa1297080:intron 35.0%
!! TGGTTTGTTTATCTTCATGG+CGG - chr8_3:57015071-57015090 Msa1297080:intron 35.0%
CTTGAATCTCTTAACTCACT+TGG + chr8_3:57015108-57015127 None:intergenic 35.0%
TCATGTCCATCAACAATCAA+AGG + chr8_3:57015144-57015163 None:intergenic 35.0%
GAAGATCAAGCACTTCAATA+TGG - chr8_3:57015162-57015181 Msa1297080:intron 35.0%
TGCCAATAGATAGAAACTCT+TGG + chr8_3:57015207-57015226 None:intergenic 35.0%
TATGGTTGCAATTTGGATTG+CGG + chr8_3:57012863-57012882 None:intergenic 35.0%
AGTCAACTATGGTTGCAATT+TGG + chr8_3:57012870-57012889 None:intergenic 35.0%
ATAGGAGAGAATGAATGAGT+TGG + chr8_3:57012907-57012926 None:intergenic 35.0%
ATTCTCTCCTATAAAGTTCC+AGG - chr8_3:57012915-57012934 Msa1297080:CDS 35.0%
TGTAGAGCTTGAGAAAAATG+AGG - chr8_3:57013047-57013066 Msa1297080:CDS 35.0%
AGGATGAATGATATTGAAGG+AGG + chr8_3:57013212-57013231 None:intergenic 35.0%
AGGAGGATGAATGATATTGA+AGG + chr8_3:57013215-57013234 None:intergenic 35.0%
!! TTTCAACTTGTTGGAGTTGA+TGG + chr8_3:57013255-57013274 None:intergenic 35.0%
! TCAACTCCAACAAGTTGAAA+AGG - chr8_3:57013255-57013274 Msa1297080:CDS 35.0%
! AGTTCTCCTTTTCAACTTGT+TGG + chr8_3:57013264-57013283 None:intergenic 35.0%
AAGCAAGTCAATAACACCAT+TGG - chr8_3:57013321-57013340 Msa1297080:CDS 35.0%
!! ACCATTGGTTGATGAATTCT+TGG - chr8_3:57013336-57013355 Msa1297080:CDS 35.0%
TCCAAGAATTCATCAACCAA+TGG + chr8_3:57013340-57013359 None:intergenic 35.0%
AGTTATAATTACTGCTACCC+TGG - chr8_3:57013448-57013467 Msa1297080:CDS 35.0%
GTTATAATTACTGCTACCCT+GGG - chr8_3:57013449-57013468 Msa1297080:CDS 35.0%
TATCAAACCAAATTCTCCCA+GGG + chr8_3:57013468-57013487 None:intergenic 35.0%
!! GTCCTTTGTTATTATGAGCA+AGG + chr8_3:57013591-57013610 None:intergenic 35.0%
TATAAACTCCTACAACCAAC+TGG + chr8_3:57013939-57013958 None:intergenic 35.0%
AGACATTGGAATTGCTCAAT+TGG + chr8_3:57014160-57014179 None:intergenic 35.0%
TAGTTCAGAACTCAAGACAT+TGG + chr8_3:57014174-57014193 None:intergenic 35.0%
!! TCAATTGATAATGGTGGTGA+TGG + chr8_3:57014205-57014224 None:intergenic 35.0%
! AGTTGGTTGCTATTCTTCTA+AGG - chr8_3:57014432-57014451 Msa1297080:intron 35.0%
! GCTATTCTTCTAAGGATCTA+TGG - chr8_3:57014440-57014459 Msa1297080:intron 35.0%
GAATGAACAAGTGCTTCATT+TGG + chr8_3:57014928-57014947 None:intergenic 35.0%
ATTCAGCTGAGACAATCTTA+GGG - chr8_3:57014944-57014963 Msa1297080:CDS 35.0%
ACAATTGGAAATCCATGTGT+TGG - chr8_3:57014976-57014995 Msa1297080:CDS 35.0%
!! ATTTTGTTTCCACCAACACA+TGG + chr8_3:57014991-57015010 None:intergenic 35.0%
AAACCAGGAAACTTAGGTAA+AGG + chr8_3:57015057-57015076 None:intergenic 35.0%
!! TCCTGGTTTGTTTATCTTCA+TGG - chr8_3:57015068-57015087 Msa1297080:intron 35.0%
!! TGGTTTGTTTATCTTCATGG+CGG - chr8_3:57015071-57015090 Msa1297080:intron 35.0%
CTTGAATCTCTTAACTCACT+TGG + chr8_3:57015108-57015127 None:intergenic 35.0%
TCATGTCCATCAACAATCAA+AGG + chr8_3:57015144-57015163 None:intergenic 35.0%
GAAGATCAAGCACTTCAATA+TGG - chr8_3:57015162-57015181 Msa1297080:intron 35.0%
TGCCAATAGATAGAAACTCT+TGG + chr8_3:57015207-57015226 None:intergenic 35.0%
ACACTCACCTGGAACTTTAT+AGG + chr8_3:57012925-57012944 None:intergenic 40.0%
AAATGAGAAGGAAGAGAAGG+AGG + chr8_3:57013232-57013251 None:intergenic 40.0%
TGGAAATGAGAAGGAAGAGA+AGG + chr8_3:57013235-57013254 None:intergenic 40.0%
!! TGGAGTTGATGGAAATGAGA+AGG + chr8_3:57013244-57013263 None:intergenic 40.0%
!! TGACCTCTTTTTGTTTGGTG+GGG + chr8_3:57013296-57013315 None:intergenic 40.0%
!! GTGACCTCTTTTTGTTTGGT+GGG + chr8_3:57013297-57013316 None:intergenic 40.0%
! TGAGGTGACCTCTTTTTGTT+TGG + chr8_3:57013301-57013320 None:intergenic 40.0%
!! GGTGTTATTGACTTGCTTTG+AGG + chr8_3:57013319-57013338 None:intergenic 40.0%
CCTTTCCCTATAGTCTTCAT+TGG + chr8_3:57013418-57013437 None:intergenic 40.0%
CCAATGAAGACTATAGGGAA+AGG - chr8_3:57013415-57013434 Msa1297080:CDS 40.0%
GTATCAAACCAAATTCTCCC+AGG + chr8_3:57013469-57013488 None:intergenic 40.0%
GGAAATCCTATTCAAGCTCA+TGG - chr8_3:57013493-57013512 Msa1297080:CDS 40.0%
AATCCTATTCAAGCTCATGG+AGG - chr8_3:57013496-57013515 Msa1297080:CDS 40.0%
ATCCTATTCAAGCTCATGGA+GGG - chr8_3:57013497-57013516 Msa1297080:CDS 40.0%
! AGCTAGCTTGGGGAAAATAA+GGG + chr8_3:57014104-57014123 None:intergenic 40.0%
! TAGCTAGCTTGGGGAAAATA+AGG + chr8_3:57014105-57014124 None:intergenic 40.0%
! ATGTCTAGATAGCTAGCTTG+GGG + chr8_3:57014114-57014133 None:intergenic 40.0%
! CATGTCTAGATAGCTAGCTT+GGG + chr8_3:57014115-57014134 None:intergenic 40.0%
ACATGTCTAGATAGCTAGCT+TGG + chr8_3:57014116-57014135 None:intergenic 40.0%
CTATGGACCTGGAAAAAAGA+AGG - chr8_3:57014457-57014476 Msa1297080:intron 40.0%
! TTTTGGTCTCTCAAGCACAT+TGG + chr8_3:57014533-57014552 None:intergenic 40.0%
AATTACGCAAAAGCTTCCGT+CGG - chr8_3:57014610-57014629 Msa1297080:CDS 40.0%
! ACCAAGGTATTTGAATGGAC+CGG + chr8_3:57014659-57014678 None:intergenic 40.0%
! TGGCTACCAAGGTATTTGAA+TGG + chr8_3:57014664-57014683 None:intergenic 40.0%
TTTGATATCCATGCGGTCTT+TGG + chr8_3:57014684-57014703 None:intergenic 40.0%
!! CTTTGAAAAGTGTCATGTCC+CGG + chr8_3:57014708-57014727 None:intergenic 40.0%
CCTTTGTGTTTGAACATAGC+CGG + chr8_3:57014865-57014884 None:intergenic 40.0%
CATTCAGCTGAGACAATCTT+AGG - chr8_3:57014943-57014962 Msa1297080:CDS 40.0%
TGAGACAATCTTAGGGACAT+GGG - chr8_3:57014951-57014970 Msa1297080:CDS 40.0%
TTAGGGACATGGGAAACAAT+TGG - chr8_3:57014961-57014980 Msa1297080:CDS 40.0%
ATTGGAAATCCATGTGTTGG+TGG - chr8_3:57014979-57014998 Msa1297080:CDS 40.0%
!!! GTTTCGAGTTTCGACTTTTC+TGG - chr8_3:57015011-57015030 Msa1297080:CDS 40.0%
CTTCCTTTACCTAAGTTTCC+TGG - chr8_3:57015051-57015070 Msa1297080:intron 40.0%
GCCATGAAGATAAACAAACC+AGG + chr8_3:57015072-57015091 None:intergenic 40.0%
!! TTATCTTCATGGCGGATAGA+TGG - chr8_3:57015079-57015098 Msa1297080:intron 40.0%
TGGTTGCCTTTGATTGTTGA+TGG - chr8_3:57015135-57015154 Msa1297080:intron 40.0%
GGCCAAGAGTTTCTATCTAT+TGG - chr8_3:57015202-57015221 Msa1297080:five_prime_UTR 40.0%
TTGAATGTGTTCCAACCCAA+AGG + chr8_3:57015246-57015265 None:intergenic 40.0%
ACACTCACCTGGAACTTTAT+AGG + chr8_3:57012925-57012944 None:intergenic 40.0%
AAATGAGAAGGAAGAGAAGG+AGG + chr8_3:57013232-57013251 None:intergenic 40.0%
TGGAAATGAGAAGGAAGAGA+AGG + chr8_3:57013235-57013254 None:intergenic 40.0%
!! TGGAGTTGATGGAAATGAGA+AGG + chr8_3:57013244-57013263 None:intergenic 40.0%
!! TGACCTCTTTTTGTTTGGTG+GGG + chr8_3:57013296-57013315 None:intergenic 40.0%
!! GTGACCTCTTTTTGTTTGGT+GGG + chr8_3:57013297-57013316 None:intergenic 40.0%
! TGAGGTGACCTCTTTTTGTT+TGG + chr8_3:57013301-57013320 None:intergenic 40.0%
!! GGTGTTATTGACTTGCTTTG+AGG + chr8_3:57013319-57013338 None:intergenic 40.0%
CCTTTCCCTATAGTCTTCAT+TGG + chr8_3:57013418-57013437 None:intergenic 40.0%
CCAATGAAGACTATAGGGAA+AGG - chr8_3:57013415-57013434 Msa1297080:CDS 40.0%
GTATCAAACCAAATTCTCCC+AGG + chr8_3:57013469-57013488 None:intergenic 40.0%
GGAAATCCTATTCAAGCTCA+TGG - chr8_3:57013493-57013512 Msa1297080:CDS 40.0%
AATCCTATTCAAGCTCATGG+AGG - chr8_3:57013496-57013515 Msa1297080:CDS 40.0%
ATCCTATTCAAGCTCATGGA+GGG - chr8_3:57013497-57013516 Msa1297080:CDS 40.0%
! AGCTAGCTTGGGGAAAATAA+GGG + chr8_3:57014104-57014123 None:intergenic 40.0%
! TAGCTAGCTTGGGGAAAATA+AGG + chr8_3:57014105-57014124 None:intergenic 40.0%
! ATGTCTAGATAGCTAGCTTG+GGG + chr8_3:57014114-57014133 None:intergenic 40.0%
! CATGTCTAGATAGCTAGCTT+GGG + chr8_3:57014115-57014134 None:intergenic 40.0%
ACATGTCTAGATAGCTAGCT+TGG + chr8_3:57014116-57014135 None:intergenic 40.0%
CTATGGACCTGGAAAAAAGA+AGG - chr8_3:57014457-57014476 Msa1297080:intron 40.0%
! TTTTGGTCTCTCAAGCACAT+TGG + chr8_3:57014533-57014552 None:intergenic 40.0%
AATTACGCAAAAGCTTCCGT+CGG - chr8_3:57014610-57014629 Msa1297080:CDS 40.0%
! ACCAAGGTATTTGAATGGAC+CGG + chr8_3:57014659-57014678 None:intergenic 40.0%
! TGGCTACCAAGGTATTTGAA+TGG + chr8_3:57014664-57014683 None:intergenic 40.0%
TTTGATATCCATGCGGTCTT+TGG + chr8_3:57014684-57014703 None:intergenic 40.0%
!! CTTTGAAAAGTGTCATGTCC+CGG + chr8_3:57014708-57014727 None:intergenic 40.0%
CCTTTGTGTTTGAACATAGC+CGG + chr8_3:57014865-57014884 None:intergenic 40.0%
CATTCAGCTGAGACAATCTT+AGG - chr8_3:57014943-57014962 Msa1297080:CDS 40.0%
TGAGACAATCTTAGGGACAT+GGG - chr8_3:57014951-57014970 Msa1297080:CDS 40.0%
TTAGGGACATGGGAAACAAT+TGG - chr8_3:57014961-57014980 Msa1297080:CDS 40.0%
ATTGGAAATCCATGTGTTGG+TGG - chr8_3:57014979-57014998 Msa1297080:CDS 40.0%
!!! GTTTCGAGTTTCGACTTTTC+TGG - chr8_3:57015011-57015030 Msa1297080:CDS 40.0%
CTTCCTTTACCTAAGTTTCC+TGG - chr8_3:57015051-57015070 Msa1297080:intron 40.0%
GCCATGAAGATAAACAAACC+AGG + chr8_3:57015072-57015091 None:intergenic 40.0%
!! TTATCTTCATGGCGGATAGA+TGG - chr8_3:57015079-57015098 Msa1297080:intron 40.0%
TGGTTGCCTTTGATTGTTGA+TGG - chr8_3:57015135-57015154 Msa1297080:intron 40.0%
GGCCAAGAGTTTCTATCTAT+TGG - chr8_3:57015202-57015221 Msa1297080:five_prime_UTR 40.0%
TTGAATGTGTTCCAACCCAA+AGG + chr8_3:57015246-57015265 None:intergenic 40.0%
CATTAGAAGACACACTCACC+TGG + chr8_3:57012936-57012955 None:intergenic 45.0%
! ACGAATTTTCGTTGCAACGC+TGG - chr8_3:57013097-57013116 Msa1297080:CDS 45.0%
! AATTTTCGTTGCAACGCTGG+AGG - chr8_3:57013100-57013119 Msa1297080:CDS 45.0%
!! TTTTGTTTGGTGGGGGGATT+TGG + chr8_3:57013288-57013307 None:intergenic 45.0%
!! ACCTCTTTTTGTTTGGTGGG+GGG + chr8_3:57013294-57013313 None:intergenic 45.0%
!! GACCTCTTTTTGTTTGGTGG+GGG + chr8_3:57013295-57013314 None:intergenic 45.0%
!! GGTGACCTCTTTTTGTTTGG+TGG + chr8_3:57013298-57013317 None:intergenic 45.0%
TGAAAGTGACTTACACGAGC+AGG + chr8_3:57013613-57013632 None:intergenic 45.0%
AGACTATCTGAGAGAGCTCA+TGG - chr8_3:57013726-57013745 Msa1297080:intron 45.0%
AACTCCTACAACCAACTGGT+AGG + chr8_3:57013935-57013954 None:intergenic 45.0%
TCTCACAATGTCTCTCCATC+AGG - chr8_3:57014396-57014415 Msa1297080:intron 45.0%
CTCCATCAGGTGGACATTAT+AGG - chr8_3:57014409-57014428 Msa1297080:intron 45.0%
CTCCTATAATGTCCACCTGA+TGG + chr8_3:57014414-57014433 None:intergenic 45.0%
CAGGTGGACATTATAGGAGT+TGG - chr8_3:57014415-57014434 Msa1297080:intron 45.0%
! CTTCTAAGGATCTATGGACC+TGG - chr8_3:57014446-57014465 Msa1297080:intron 45.0%
! GACGGAAGCTTTTGCGTAAT+TGG + chr8_3:57014611-57014630 None:intergenic 45.0%
ATCACTGAATGCTATGCCGA+CGG + chr8_3:57014629-57014648 None:intergenic 45.0%
GCATTCAGTGATACTCCTAC+CGG - chr8_3:57014637-57014656 Msa1297080:CDS 45.0%
AGGTATTTGAATGGACCGGT+AGG + chr8_3:57014655-57014674 None:intergenic 45.0%
ACCGGTCCATTCAAATACCT+TGG - chr8_3:57014655-57014674 Msa1297080:CDS 45.0%
CCGGCTATGTTCAAACACAA+AGG - chr8_3:57014862-57014881 Msa1297080:CDS 45.0%
! ATGGTTACATCAGGTTGCAC+TGG - chr8_3:57014895-57014914 Msa1297080:CDS 45.0%
! TTACATCAGGTTGCACTGGA+TGG - chr8_3:57014899-57014918 Msa1297080:CDS 45.0%
! TACATCAGGTTGCACTGGAT+GGG - chr8_3:57014900-57014919 Msa1297080:CDS 45.0%
CTGAGACAATCTTAGGGACA+TGG - chr8_3:57014950-57014969 Msa1297080:CDS 45.0%
AATGGAAACTGCCTTTGGGT+TGG - chr8_3:57015232-57015251 Msa1297080:five_prime_UTR 45.0%
CATTAGAAGACACACTCACC+TGG + chr8_3:57012936-57012955 None:intergenic 45.0%
! ACGAATTTTCGTTGCAACGC+TGG - chr8_3:57013097-57013116 Msa1297080:CDS 45.0%
! AATTTTCGTTGCAACGCTGG+AGG - chr8_3:57013100-57013119 Msa1297080:CDS 45.0%
!! TTTTGTTTGGTGGGGGGATT+TGG + chr8_3:57013288-57013307 None:intergenic 45.0%
!! ACCTCTTTTTGTTTGGTGGG+GGG + chr8_3:57013294-57013313 None:intergenic 45.0%
!! GACCTCTTTTTGTTTGGTGG+GGG + chr8_3:57013295-57013314 None:intergenic 45.0%
!! GGTGACCTCTTTTTGTTTGG+TGG + chr8_3:57013298-57013317 None:intergenic 45.0%
TGAAAGTGACTTACACGAGC+AGG + chr8_3:57013613-57013632 None:intergenic 45.0%
AGACTATCTGAGAGAGCTCA+TGG - chr8_3:57013726-57013745 Msa1297080:intron 45.0%
AACTCCTACAACCAACTGGT+AGG + chr8_3:57013935-57013954 None:intergenic 45.0%
TCTCACAATGTCTCTCCATC+AGG - chr8_3:57014396-57014415 Msa1297080:intron 45.0%
CTCCATCAGGTGGACATTAT+AGG - chr8_3:57014409-57014428 Msa1297080:intron 45.0%
CTCCTATAATGTCCACCTGA+TGG + chr8_3:57014414-57014433 None:intergenic 45.0%
CAGGTGGACATTATAGGAGT+TGG - chr8_3:57014415-57014434 Msa1297080:intron 45.0%
! CTTCTAAGGATCTATGGACC+TGG - chr8_3:57014446-57014465 Msa1297080:intron 45.0%
! GACGGAAGCTTTTGCGTAAT+TGG + chr8_3:57014611-57014630 None:intergenic 45.0%
ATCACTGAATGCTATGCCGA+CGG + chr8_3:57014629-57014648 None:intergenic 45.0%
GCATTCAGTGATACTCCTAC+CGG - chr8_3:57014637-57014656 Msa1297080:CDS 45.0%
AGGTATTTGAATGGACCGGT+AGG + chr8_3:57014655-57014674 None:intergenic 45.0%
ACCGGTCCATTCAAATACCT+TGG - chr8_3:57014655-57014674 Msa1297080:CDS 45.0%
CCGGCTATGTTCAAACACAA+AGG - chr8_3:57014862-57014881 Msa1297080:CDS 45.0%
! ATGGTTACATCAGGTTGCAC+TGG - chr8_3:57014895-57014914 Msa1297080:CDS 45.0%
! TTACATCAGGTTGCACTGGA+TGG - chr8_3:57014899-57014918 Msa1297080:CDS 45.0%
! TACATCAGGTTGCACTGGAT+GGG - chr8_3:57014900-57014919 Msa1297080:CDS 45.0%
CTGAGACAATCTTAGGGACA+TGG - chr8_3:57014950-57014969 Msa1297080:CDS 45.0%
AATGGAAACTGCCTTTGGGT+TGG - chr8_3:57015232-57015251 Msa1297080:five_prime_UTR 45.0%
! ATTGCGGATTGATCTGCCCT+CGG + chr8_3:57012847-57012866 None:intergenic 50.0%
TCCCCCCACCAAACAAAAAG+AGG - chr8_3:57013290-57013309 Msa1297080:CDS 50.0%
ACTGCTACCCTGGGAGAATT+TGG - chr8_3:57013458-57013477 Msa1297080:CDS 50.0%
CACCCTCCATGAGCTTGAAT+AGG + chr8_3:57013502-57013521 None:intergenic 50.0%
GCATCCTACCAGTTGGTTGT+AGG - chr8_3:57013928-57013947 Msa1297080:intron 50.0%
CACAATGTCTCTCCATCAGG+TGG - chr8_3:57014399-57014418 Msa1297080:intron 50.0%
GACCGCATGGATATCAAAGC+CGG - chr8_3:57014686-57014705 Msa1297080:CDS 50.0%
ACCGCATGGATATCAAAGCC+GGG - chr8_3:57014687-57014706 Msa1297080:CDS 50.0%
! TCCCGGCTTTGATATCCATG+CGG + chr8_3:57014691-57014710 None:intergenic 50.0%
! ATTGCGGATTGATCTGCCCT+CGG + chr8_3:57012847-57012866 None:intergenic 50.0%
TCCCCCCACCAAACAAAAAG+AGG - chr8_3:57013290-57013309 Msa1297080:CDS 50.0%
ACTGCTACCCTGGGAGAATT+TGG - chr8_3:57013458-57013477 Msa1297080:CDS 50.0%
CACCCTCCATGAGCTTGAAT+AGG + chr8_3:57013502-57013521 None:intergenic 50.0%
GCATCCTACCAGTTGGTTGT+AGG - chr8_3:57013928-57013947 Msa1297080:intron 50.0%
CACAATGTCTCTCCATCAGG+TGG - chr8_3:57014399-57014418 Msa1297080:intron 50.0%
GACCGCATGGATATCAAAGC+CGG - chr8_3:57014686-57014705 Msa1297080:CDS 50.0%
ACCGCATGGATATCAAAGCC+GGG - chr8_3:57014687-57014706 Msa1297080:CDS 50.0%
! TCCCGGCTTTGATATCCATG+CGG + chr8_3:57014691-57014710 None:intergenic 50.0%
GGGCTAAGCATCCTACCAGT+TGG - chr8_3:57013921-57013940 Msa1297080:intron 55.0%
CATGCGGTCTTTGGCTACCA+AGG + chr8_3:57014675-57014694 None:intergenic 55.0%
! CTTGGTAGCCAAAGACCGCA+TGG - chr8_3:57014673-57014692 Msa1297080:CDS 55.0%
GGGCTAAGCATCCTACCAGT+TGG - chr8_3:57013921-57013940 Msa1297080:intron 55.0%
CATGCGGTCTTTGGCTACCA+AGG + chr8_3:57014675-57014694 None:intergenic 55.0%
! CTTGGTAGCCAAAGACCGCA+TGG - chr8_3:57014673-57014692 Msa1297080:CDS 55.0%
! CGGTCAGCGAAGAGAAGCGC+CGG - chr8_3:57014843-57014862 Msa1297080:CDS 65.0%
! CGGTCAGCGAAGAGAAGCGC+CGG - chr8_3:57014843-57014862 Msa1297080:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 57012844 57015269 57012844 ID=Msa1297080;Name=Msa1297080
chr8_3 mRNA 57012844 57015269 57012844 ID=Msa1297080-mRNA-1;Parent=Msa1297080;Name=Msa1297080-mRNA-1;_AED=0.00;_eAED=0.00;_QI=105|1|0.66|1|1|0.33|3|0|468
chr8_3 exon 57012844 57013695 57012844 ID=Msa1297080-mRNA-1:exon:16370;Parent=Msa1297080-mRNA-1
chr8_3 exon 57014495 57015061 57014495 ID=Msa1297080-mRNA-1:exon:16369;Parent=Msa1297080-mRNA-1
chr8_3 exon 57015177 57015269 57015177 ID=Msa1297080-mRNA-1:exon:16368;Parent=Msa1297080-mRNA-1
chr8_3 five_prime_UTR 57015177 57015269 57015177 ID=Msa1297080-mRNA-1:five_prime_utr;Parent=Msa1297080-mRNA-1
chr8_3 five_prime_UTR 57015050 57015061 57015050 ID=Msa1297080-mRNA-1:five_prime_utr;Parent=Msa1297080-mRNA-1
chr8_3 CDS 57014495 57015049 57014495 ID=Msa1297080-mRNA-1:cds;Parent=Msa1297080-mRNA-1
chr8_3 CDS 57012844 57013695 57012844 ID=Msa1297080-mRNA-1:cds;Parent=Msa1297080-mRNA-1
Gene Sequence

>Msa1297080

ATGAGGATGAAGAATCTATACAAGAAACCAATTACGAATTTTCGTTGCAACGCTGGAGGTAGATATTGTTCTATGTCACTAGTAATAATATGGGGTTTATTAATCTTAGGATGCATATTTTTACTTCATCTATATTCTAATAACACCTCCTTCAATATCATTCATCCTCCTTCTCTTCCTTCTCATTTCCATCAACTCCAACAAGTTGAAAAGGAGAACTTCCAAATCCCCCCACCAAACAAAAAGAGGTCACCTCAAAGCAAGTCAATAACACCATTGGTTGATGAATTCTTGGATCAAGATTCATCACTTAGACATGTTTTCTTTCCTCATAAAACAAGTGCTATTGATCCAATGAAGACTATAGGGAAAGGAAATAATGATAGTTATAATTACTGCTACCCTGGGAGAATTTGGTTTGATACTGATGGAAATCCTATTCAAGCTCATGGAGGGTGCATTCTATTTGATGAAATTTCAAATACTTATTATTGGTATGGTGAATATAAAGATGGCCCTACTTACCTTGCTCATAATAACAAAGGACCTGCTCGTGTGGACATTATAGGAGTTGGTTGCTATTCTTCTAAGGATCTATGGACCTGGAAAAAAGAAGGTATTGTACTAGCAGCAGAGAAAACAGATAAAACACATGATCTGCACAAGTCCAATGTGCTTGAGAGACCAAAAGTTATTTACAATGAGAAAACAAGAAAGTATGTGATGTGGATGCATATCGACAACGCCAATTACGCAAAAGCTTCCGTCGGCATAGCATTCAGTGATACTCCTACCGGTCCATTCAAATACCTTGGTAGCCAAAGACCGCATGGATATCAAAGCCGGGACATGACACTTTTCAAAGATGAAGACAATGTTGCATATCTAATATACTCATCTGAAGAAAACAATGTAATGCACATTGGACCCTTGACTGAAGATTATCTCAATGTGACATCTGTCATGAAAAGAATTTTCGTCGGTCAGCGAAGAGAAGCGCCGGCTATGTTCAAACACAAAGGAACATATTACATGGTTACATCAGGTTGCACTGGATGGGCACCAAATGAAGCACTTGTTCATTCAGCTGAGACAATCTTAGGGACATGGGAAACAATTGGAAATCCATGTGTTGGTGGAAACAAAATGTTTCGAGTTTCGACTTTTCTGGCACAAAGTACTTTTGTGCTTCCTTTACCTAAGTTTCCTGGTTTGTTTATCTTCATGGCGGATAGATGGAATCCAAGTGAGTTAAGAGATTCAAGATATGTTTGGTTGCCTTTGATTGTTGATGGACATGAAGATCAAGCACTTCAATATGGTTTTGATAACACATTTTGGCCAAGAGTTTCTATCTATTGGCATAAAAAATGGAAACTGCCTTTGGGTTGGAACACATTCAAATGA

Protein sequence

>Msa1297080

MRMKNLYKKPITNFRCNAGGRYCSMSLVIIWGLLILGCIFLLHLYSNNTSFNIIHPPSLPSHFHQLQQVEKENFQIPPPNKKRSPQSKSITPLVDEFLDQDSSLRHVFFPHKTSAIDPMKTIGKGNNDSYNYCYPGRIWFDTDGNPIQAHGGCILFDEISNTYYWYGEYKDGPTYLAHNNKGPARVDIIGVGCYSSKDLWTWKKEGIVLAAEKTDKTHDLHKSNVLERPKVIYNEKTRKYVMWMHIDNANYAKASVGIAFSDTPTGPFKYLGSQRPHGYQSRDMTLFKDEDNVAYLIYSSEENNVMHIGPLTEDYLNVTSVMKRIFVGQRREAPAMFKHKGTYYMVTSGCTGWAPNEALVHSAETILGTWETIGNPCVGGNKMFRVSTFLAQSTFVLPLPKFPGLFIFMADRWNPSELRDSRYVWLPLIVDGHEDQALQYGFDNTFWPRVSIYWHKKWKLPLGWNTFK*