AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0680550


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0680550 MtrunA17_Chr4g0026581 98.425 381 6 0 1 381 1 381 0.0 786
Msa0680550 MtrunA17_Chr4g0027491 75.263 380 91 2 3 379 8 387 0.0 619
Msa0680550 MtrunA17_Chr1g0208111 74.932 367 89 2 3 366 8 374 0.0 592
Msa0680550 MtrunA17_Chr1g0208571 70.712 379 90 3 3 378 8 368 0.0 559
Msa0680550 MtrunA17_Chr2g0300401 61.633 245 67 3 3 244 8 228 5.38e-103 303
Msa0680550 MtrunA17_Chr2g0327981 28.324 346 197 11 14 357 38 334 4.07e-30 118
Msa0680550 MtrunA17_Chr4g0023721 56.989 93 39 1 3 94 8 100 9.28e-30 110
Msa0680550 MtrunA17_Chr1g0195521 26.923 364 194 16 14 357 118 429 5.35e-24 102
Msa0680550 MtrunA17_Chr4g0067461 24.638 345 201 11 16 357 113 401 3.28e-22 97.4
Msa0680550 MtrunA17_Chr1g0182091 25.100 251 141 9 110 357 5 211 6.95e-14 70.5
Msa0680550 MtrunA17_Chr3g0145871 78.125 32 7 0 87 118 1 32 4.62e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0680550 AT1G08200.1 74.803 381 93 2 2 379 6 386 0.0 615
Msa0680550 AT2G27860.1 73.753 381 97 2 2 379 6 386 0.0 607
Msa0680550 AT3G46440.2 27.746 346 199 10 14 357 29 325 1.31e-28 114
Msa0680550 AT3G46440.1 27.746 346 199 10 14 357 29 325 1.31e-28 114
Msa0680550 AT5G59290.4 27.457 346 200 11 14 357 1 297 4.76e-28 112
Msa0680550 AT5G59290.1 27.457 346 200 11 14 357 30 326 9.67e-28 112
Msa0680550 AT5G59290.3 27.507 349 202 11 11 357 20 319 1.24e-27 111
Msa0680550 AT2G28760.1 28.035 346 198 12 14 357 31 327 1.61e-27 111
Msa0680550 AT2G28760.2 28.035 346 198 12 14 357 31 327 1.61e-27 111
Msa0680550 AT2G28760.3 28.035 346 198 12 14 357 31 327 1.61e-27 111
Msa0680550 AT5G59290.2 28.035 346 198 12 14 357 45 341 1.64e-27 112
Msa0680550 AT2G28760.4 27.746 346 199 11 14 357 62 358 3.62e-27 111
Msa0680550 AT3G53520.1 28.857 350 189 17 14 357 120 415 4.01e-27 112
Msa0680550 AT3G53520.2 29.060 351 185 17 14 357 120 413 4.79e-25 106
Msa0680550 AT2G47650.2 26.149 348 207 13 14 357 121 422 7.24e-25 105
Msa0680550 AT3G62830.2 26.648 349 198 14 14 357 119 414 1.83e-24 104
Msa0680550 AT3G62830.1 26.648 349 198 14 14 357 119 414 1.83e-24 104
Msa0680550 AT2G47650.1 26.074 349 200 14 14 357 121 416 7.07e-24 102
Msa0680550 AT3G53520.3 27.451 255 146 11 14 264 120 339 1.13e-15 78.2

Find 102 sgRNAs with CRISPR-Local

Find 492 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGTGTCCATTTGCTCTATC+AGG 0.212687 4_4:-39645419 None:intergenic
TTAACAGATACTTCATTATC+TGG 0.251368 4_4:-39645458 None:intergenic
ATGACAGACAGGCTCATTTA+TGG 0.288959 4_4:+39644731 Msa0680550:CDS
GAGGAAGAGGAAAGAGAATA+AGG 0.298610 4_4:-39643270 None:intergenic
CTATTGTGAGACCTTATAAC+TGG 0.307051 4_4:+39645031 Msa0680550:CDS
AGCAACTCTGCAAGTTGAAT+TGG 0.307114 4_4:+39646035 Msa0680550:exon
AGGGAAGCAAGAGACAAATA+AGG 0.328827 4_4:-39646234 None:intergenic
TTTCTACGTGTGAGGTCTTT+GGG 0.341819 4_4:+39643950 Msa0680550:CDS
GGATTATAACACGCGGCCTT+TGG 0.360459 4_4:+39643747 Msa0680550:CDS
AGTTCATCAAGAGATGTCTT+TGG 0.360698 4_4:-39645934 None:intergenic
TAATATAGAGAAAGGTTCTC+TGG 0.363177 4_4:-39645283 None:intergenic
CAACACACGCAAAAGCTTCA+TGG 0.369148 4_4:+39643322 Msa0680550:exon
CTTGGTCCAATCCAGTTATA+AGG 0.372591 4_4:-39645042 None:intergenic
CCAGGAATGAAGTCCATTCT+TGG 0.373462 4_4:-39645060 None:intergenic
TATGGCTTTGTGAGATGTTT+CGG 0.384939 4_4:-39643444 None:intergenic
TGCAGAGTTGCTCAAGTTGA+AGG 0.385548 4_4:-39646024 None:intergenic
GAGAAAATGCAGAGAGGAAG+AGG 0.403709 4_4:-39643283 None:intergenic
CCAAGAATGGACTTCATTCC+TGG 0.411557 4_4:+39645060 Msa0680550:CDS
TGCATCTTTAATATAGAGAA+AGG 0.415573 4_4:-39645291 None:intergenic
TGTGGAAGTTAGTTAATAAC+TGG 0.421071 4_4:-39643243 None:intergenic
TCCTTGATAAGTCTCATCCT+TGG 0.421329 4_4:+39643501 Msa0680550:CDS
ACTAGCCGAGCTGATGATAA+AGG 0.426624 4_4:+39645484 Msa0680550:CDS
GTGTGATTGGCTTTCCATCC+AGG 0.428127 4_4:-39643355 None:intergenic
GACCACCTCTGTTTATGAAC+TGG 0.429052 4_4:-39644689 None:intergenic
GACATCTCTTGATGAACTGT+TGG 0.432077 4_4:+39645939 Msa0680550:CDS
TTCAAGATGGTGATTGAAGA+AGG 0.434085 4_4:-39643211 None:intergenic
AGAGGAGACATCAATGACTA+TGG 0.439801 4_4:-39643462 None:intergenic
GTTTGAGCGGCTCGCCGCGC+AGG 0.444406 4_4:-39645241 None:intergenic
CTTCATGGATCGAGTGAACC+TGG 0.446499 4_4:+39643337 Msa0680550:exon
AAGCTTTGACAAGAGTTTCA+AGG 0.448052 4_4:-39643571 None:intergenic
ACTGAAACAAGCTAAAACTC+TGG 0.453604 4_4:-39645109 None:intergenic
CATATTGAGATCGGTGTGAT+TGG 0.458540 4_4:-39643368 None:intergenic
TCTTTGAGCTTGTAATATTG+AGG 0.462050 4_4:-39644641 None:intergenic
CCTTGATAAGTCTCATCCTT+GGG 0.467401 4_4:+39643502 Msa0680550:CDS
GTGAGACCTTATAACTGGAT+TGG 0.470330 4_4:+39645036 Msa0680550:CDS
ATAGCTGAGCATGCGGAGAA+TGG 0.470908 4_4:+39644997 Msa0680550:intron
GAGGTCTTTGGGAAGACAAT+TGG 0.475078 4_4:+39643961 Msa0680550:CDS
AGCAGAAGATATATGACTAT+AGG 0.475669 4_4:-39646170 None:intergenic
TAACTGGATTGGACCAAGAA+TGG 0.477010 4_4:+39645047 Msa0680550:CDS
TTGGTGATAATTGTCATGTC+AGG 0.489901 4_4:-39645700 None:intergenic
GGGAAGCAAGAGACAAATAA+GGG 0.494455 4_4:-39646233 None:intergenic
TCATTTGATGAAACTCAATA+CGG 0.494714 4_4:-39643529 None:intergenic
GATAACCCTGATAGAGCAAA+TGG 0.495280 4_4:+39645413 Msa0680550:CDS
CTATATTAAAGATGCAATTG+AGG 0.495904 4_4:+39645298 Msa0680550:CDS
TAACAGATACTTCATTATCT+GGG 0.496503 4_4:-39645457 None:intergenic
TGTACCTTTCTATACTCCTC+AGG 0.497124 4_4:-39643994 None:intergenic
GAGCCGCTCAAACTTGTTGA+TGG 0.497397 4_4:+39645251 Msa0680550:CDS
ATGTCTGATGTTGATATTGA+AGG 0.498197 4_4:-39645969 None:intergenic
CTGAAACAAGCTAAAACTCT+GGG 0.509904 4_4:-39645108 None:intergenic
AAGGTATATGCAAAGGTGGC+TGG 0.511233 4_4:+39645592 Msa0680550:intron
GACTTCATTCCTGGTGTGGA+TGG 0.515549 4_4:+39645069 Msa0680550:CDS
GAAAGAGAATAAGGTGTGTG+TGG 0.524943 4_4:-39643261 None:intergenic
TAATTTCATTGATGCGATCC+CGG 0.525963 4_4:+39643783 Msa0680550:CDS
ATATGCATGATCGGCGGTGG+AGG 0.526513 4_4:+39643386 Msa0680550:CDS
TCAATATGCATGATCGGCGG+TGG 0.527392 4_4:+39643383 Msa0680550:CDS
TCCCTCTAGTCTATCAACTC+TGG 0.531156 4_4:+39645621 Msa0680550:CDS
CCCAAGGATGAGACTTATCA+AGG 0.539968 4_4:-39643502 None:intergenic
AATATAGAGAAAGGTTCTCT+GGG 0.541627 4_4:-39645282 None:intergenic
TTTCATTAAGGTATATGCAA+AGG 0.543621 4_4:+39645585 Msa0680550:intron
ATTTGTCAGATTGTCTCTCA+TGG 0.544220 4_4:-39646099 None:intergenic
TGTGTCCATTTGCTCTATCA+GGG 0.545363 4_4:-39645418 None:intergenic
AAGGCTATGATGACAGCGAC+AGG 0.546404 4_4:+39645671 Msa0680550:CDS
ACTCTGGGGACACCATCACT+TGG 0.547457 4_4:-39645093 None:intergenic
AAATGGACACATCTTTAATG+TGG 0.547790 4_4:+39645430 Msa0680550:CDS
GTGCAAAGCAAATGACAGAC+AGG 0.549748 4_4:+39644720 Msa0680550:CDS
TGACAGAATACCAAGCTGCT+TGG 0.552443 4_4:-39645719 None:intergenic
CATTAAGGTATATGCAAAGG+TGG 0.552476 4_4:+39645588 Msa0680550:intron
ATGGATCGAGTGAACCTGGA+TGG 0.568265 4_4:+39643341 Msa0680550:CDS
ACAATTATCACCAAGCAGCT+TGG 0.568576 4_4:+39645709 Msa0680550:CDS
CCGATCTCAATATGCATGAT+CGG 0.570177 4_4:+39643377 Msa0680550:CDS
TCCAGAGTTGATAGACTAGA+GGG 0.573185 4_4:-39645622 None:intergenic
GGTGTGGATGGTCCAAGTGA+TGG 0.573258 4_4:+39645081 Msa0680550:CDS
AATTGGTAGCTTTCTGCCTG+AGG 0.575752 4_4:+39643978 Msa0680550:CDS
TCTGCCTGAGGAGTATAGAA+AGG 0.581092 4_4:+39643990 Msa0680550:CDS
AGCTACCTTTATCATCAGCT+CGG 0.583418 4_4:-39645489 None:intergenic
TGCTGCGATTTGCACGCCAG+CGG 0.584337 4_4:+39643726 Msa0680550:CDS
AATGGACACATCTTTAATGT+GGG 0.590992 4_4:+39645431 Msa0680550:CDS
ATCGGCGGTGGAGGATTCAT+CGG 0.591414 4_4:+39643395 Msa0680550:CDS
AGCAAGAGACAAATAAGGGA+AGG 0.592479 4_4:-39646229 None:intergenic
CCGCTCAAACTTGTTGATGG+TGG 0.594336 4_4:+39645254 Msa0680550:CDS
GGCCGCGTGTTATAATCCGC+TGG 0.595657 4_4:-39643742 None:intergenic
TCACTTGGACCATCCACACC+AGG 0.596283 4_4:-39645078 None:intergenic
CCGATCATGCATATTGAGAT+CGG 0.601052 4_4:-39643377 None:intergenic
ATCCAGAGTTGATAGACTAG+AGG 0.603381 4_4:-39645623 None:intergenic
TTGGTCCAGTTCATAAACAG+AGG 0.616241 4_4:+39644684 Msa0680550:CDS
GTCCAGTTCATAAACAGAGG+TGG 0.623509 4_4:+39644687 Msa0680550:CDS
TGTCTGATGTTGATATTGAA+GGG 0.635641 4_4:-39645968 None:intergenic
AACTCAATACGGTTAGCCCA+AGG 0.640625 4_4:-39643518 None:intergenic
TAAATCTATAGCTGAGCATG+CGG 0.640819 4_4:+39644990 Msa0680550:intron
TTACTGTAAATAGTATCCAA+AGG 0.643272 4_4:-39643763 None:intergenic
AATGGACTTCATTCCTGGTG+TGG 0.645922 4_4:+39645065 Msa0680550:CDS
AGAAGAGAGAAAATGCAGAG+AGG 0.648423 4_4:-39643289 None:intergenic
CGCCAGCGGATTATAACACG+CGG 0.650284 4_4:+39643740 Msa0680550:CDS
TGGTGATAATTGTCATGTCA+GGG 0.653118 4_4:-39645699 None:intergenic
GCAAGAGACAAATAAGGGAA+GGG 0.656696 4_4:-39646228 None:intergenic
TATATGATACACTAATTGTG+AGG 0.660077 4_4:+39646123 Msa0680550:three_prime_UTR
CCACCATCAACAAGTTTGAG+CGG 0.662331 4_4:-39645254 None:intergenic
ATCTCAATATGCATGATCGG+CGG 0.697020 4_4:+39643380 Msa0680550:CDS
TTTCATTGATGCGATCCCGG+TGG 0.705047 4_4:+39643786 Msa0680550:CDS
AGAGTTGATAGACTAGAGGG+AGG 0.706272 4_4:-39645619 None:intergenic
TGAAACAAGCTAAAACTCTG+GGG 0.732978 4_4:-39645107 None:intergenic
TTGCTCCAGAATCTCCTGCG+CGG 0.776898 4_4:+39645227 Msa0680550:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTTATTGATTTTGAA+TGG + chr4_4:39643675-39643694 Msa0680550:intron 10.0%
!!! TTATTTTTATTGATTTTGAA+TGG + chr4_4:39643675-39643694 Msa0680550:intron 10.0%
!!! TTATTTTTATTGATTTTGAA+TGG + chr4_4:39643675-39643694 Msa0680550:intron 10.0%
!!! AGAATTTTTAAAACATAACA+TGG + chr4_4:39644052-39644071 Msa0680550:intron 15.0%
!!! GAAAAAAGTGATTTTTTTAA+GGG - chr4_4:39644177-39644196 None:intergenic 15.0%
!!! TGAAAAAAGTGATTTTTTTA+AGG - chr4_4:39644178-39644197 None:intergenic 15.0%
!!! GAACTCATTTTTTATAAAAA+TGG + chr4_4:39644341-39644360 Msa0680550:intron 15.0%
!! CTAAAAGTTAAATATATCTT+TGG - chr4_4:39644544-39644563 None:intergenic 15.0%
!!! AGAATTTTTAAAACATAACA+TGG + chr4_4:39644052-39644071 Msa0680550:intron 15.0%
!!! GAAAAAAGTGATTTTTTTAA+GGG - chr4_4:39644177-39644196 None:intergenic 15.0%
!!! TGAAAAAAGTGATTTTTTTA+AGG - chr4_4:39644178-39644197 None:intergenic 15.0%
!!! GAACTCATTTTTTATAAAAA+TGG + chr4_4:39644341-39644360 Msa0680550:intron 15.0%
!! CTAAAAGTTAAATATATCTT+TGG - chr4_4:39644544-39644563 None:intergenic 15.0%
!!! AGAATTTTTAAAACATAACA+TGG + chr4_4:39644052-39644071 Msa0680550:intron 15.0%
!!! GAAAAAAGTGATTTTTTTAA+GGG - chr4_4:39644177-39644196 None:intergenic 15.0%
!!! TGAAAAAAGTGATTTTTTTA+AGG - chr4_4:39644178-39644197 None:intergenic 15.0%
!!! GAACTCATTTTTTATAAAAA+TGG + chr4_4:39644341-39644360 Msa0680550:intron 15.0%
!! CTAAAAGTTAAATATATCTT+TGG - chr4_4:39644544-39644563 None:intergenic 15.0%
!! ATAAAAATGGAACAAGAAAA+TGG - chr4_4:39643625-39643644 None:intergenic 20.0%
!! AAAAATAAATAACTTACCAC+CGG - chr4_4:39643805-39643824 None:intergenic 20.0%
!!! GGGAAAAAATAGATTTTTTT+TGG - chr4_4:39644157-39644176 None:intergenic 20.0%
!!! TCATTTTTAAGTGTTTGTTT+AGG + chr4_4:39644195-39644214 Msa0680550:intron 20.0%
!!! ATCTATTTTTTTCAACAACA+AGG + chr4_4:39644297-39644316 Msa0680550:intron 20.0%
!!! AATGGATTTTTTTTGATAGT+AGG + chr4_4:39644359-39644378 Msa0680550:intron 20.0%
!! AACATATATGATTACATTCA+GGG - chr4_4:39644485-39644504 None:intergenic 20.0%
!! ATAATATCGAAAGTAAGTTA+AGG - chr4_4:39644970-39644989 None:intergenic 20.0%
!!! TTCTAAATTAGTCTTTAGAT+AGG + chr4_4:39645511-39645530 Msa0680550:intron 20.0%
!!! TTATTTCTCTTGAAAAACAA+AGG - chr4_4:39645543-39645562 None:intergenic 20.0%
!!! CTCATTTTCTTTTTTCATTA+AGG + chr4_4:39645573-39645592 Msa0680550:intron 20.0%
!! ATAAAAATGGAACAAGAAAA+TGG - chr4_4:39643625-39643644 None:intergenic 20.0%
!! AAAAATAAATAACTTACCAC+CGG - chr4_4:39643805-39643824 None:intergenic 20.0%
!!! GGGAAAAAATAGATTTTTTT+TGG - chr4_4:39644157-39644176 None:intergenic 20.0%
!!! TCATTTTTAAGTGTTTGTTT+AGG + chr4_4:39644195-39644214 Msa0680550:intron 20.0%
!!! ATCTATTTTTTTCAACAACA+AGG + chr4_4:39644297-39644316 Msa0680550:intron 20.0%
!!! AATGGATTTTTTTTGATAGT+AGG + chr4_4:39644359-39644378 Msa0680550:intron 20.0%
!! AACATATATGATTACATTCA+GGG - chr4_4:39644485-39644504 None:intergenic 20.0%
!! ATAATATCGAAAGTAAGTTA+AGG - chr4_4:39644970-39644989 None:intergenic 20.0%
!!! TTCTAAATTAGTCTTTAGAT+AGG + chr4_4:39645511-39645530 Msa0680550:intron 20.0%
!!! TTATTTCTCTTGAAAAACAA+AGG - chr4_4:39645543-39645562 None:intergenic 20.0%
!!! CTCATTTTCTTTTTTCATTA+AGG + chr4_4:39645573-39645592 Msa0680550:intron 20.0%
!! ATAAAAATGGAACAAGAAAA+TGG - chr4_4:39643625-39643644 None:intergenic 20.0%
!! AAAAATAAATAACTTACCAC+CGG - chr4_4:39643805-39643824 None:intergenic 20.0%
!!! GGGAAAAAATAGATTTTTTT+TGG - chr4_4:39644157-39644176 None:intergenic 20.0%
!!! TCATTTTTAAGTGTTTGTTT+AGG + chr4_4:39644195-39644214 Msa0680550:intron 20.0%
!!! ATCTATTTTTTTCAACAACA+AGG + chr4_4:39644297-39644316 Msa0680550:intron 20.0%
!!! AATGGATTTTTTTTGATAGT+AGG + chr4_4:39644359-39644378 Msa0680550:intron 20.0%
!! AACATATATGATTACATTCA+GGG - chr4_4:39644485-39644504 None:intergenic 20.0%
!! ATAATATCGAAAGTAAGTTA+AGG - chr4_4:39644970-39644989 None:intergenic 20.0%
!!! TTCTAAATTAGTCTTTAGAT+AGG + chr4_4:39645511-39645530 Msa0680550:intron 20.0%
!!! TTATTTCTCTTGAAAAACAA+AGG - chr4_4:39645543-39645562 None:intergenic 20.0%
!!! CTCATTTTCTTTTTTCATTA+AGG + chr4_4:39645573-39645592 Msa0680550:intron 20.0%
! TCATTTGATGAAACTCAATA+CGG - chr4_4:39643532-39643551 None:intergenic 25.0%
! TTACTGTAAATAGTATCCAA+AGG - chr4_4:39643766-39643785 None:intergenic 25.0%
! AAAATAAATAACTTACCACC+GGG - chr4_4:39643804-39643823 None:intergenic 25.0%
! TTATAATGAGTTGTGATTGA+TGG + chr4_4:39643872-39643891 Msa0680550:intron 25.0%
! TACAGCAATAATCTCTTTAT+GGG + chr4_4:39644013-39644032 Msa0680550:intron 25.0%
! TAAGAAAATGAAAGTGATTG+AGG + chr4_4:39644109-39644128 Msa0680550:intron 25.0%
! AAGAAAATGAAAGTGATTGA+GGG + chr4_4:39644110-39644129 Msa0680550:intron 25.0%
!! TGGAAAAAATCTGAAACAAA+CGG - chr4_4:39644137-39644156 None:intergenic 25.0%
!! CCTAATAGCTTTTCATTTTA+GGG - chr4_4:39644261-39644280 None:intergenic 25.0%
!! TCCTAATAGCTTTTCATTTT+AGG - chr4_4:39644262-39644281 None:intergenic 25.0%
! CAACATATATGATTACATTC+AGG - chr4_4:39644486-39644505 None:intergenic 25.0%
! CTGAATGTAATCATATATGT+TGG + chr4_4:39644484-39644503 Msa0680550:intron 25.0%
! TGCATCTTTAATATAGAGAA+AGG - chr4_4:39645294-39645313 None:intergenic 25.0%
! CTATATTAAAGATGCAATTG+AGG + chr4_4:39645298-39645317 Msa0680550:CDS 25.0%
! TAACAGATACTTCATTATCT+GGG - chr4_4:39645460-39645479 None:intergenic 25.0%
! TTAACAGATACTTCATTATC+TGG - chr4_4:39645461-39645480 None:intergenic 25.0%
! TCAAGAGAAATAAACAACTT+TGG + chr4_4:39645550-39645569 Msa0680550:intron 25.0%
! TTTCATTAAGGTATATGCAA+AGG + chr4_4:39645585-39645604 Msa0680550:intron 25.0%
! TCAAATCTTCAACAAAATCA+CGG - chr4_4:39645808-39645827 None:intergenic 25.0%
! TATATGATACACTAATTGTG+AGG + chr4_4:39646123-39646142 Msa0680550:three_prime_UTR 25.0%
! TCATTTGATGAAACTCAATA+CGG - chr4_4:39643532-39643551 None:intergenic 25.0%
! TTACTGTAAATAGTATCCAA+AGG - chr4_4:39643766-39643785 None:intergenic 25.0%
! AAAATAAATAACTTACCACC+GGG - chr4_4:39643804-39643823 None:intergenic 25.0%
! TTATAATGAGTTGTGATTGA+TGG + chr4_4:39643872-39643891 Msa0680550:intron 25.0%
! TACAGCAATAATCTCTTTAT+GGG + chr4_4:39644013-39644032 Msa0680550:intron 25.0%
! TAAGAAAATGAAAGTGATTG+AGG + chr4_4:39644109-39644128 Msa0680550:intron 25.0%
! AAGAAAATGAAAGTGATTGA+GGG + chr4_4:39644110-39644129 Msa0680550:intron 25.0%
!! TGGAAAAAATCTGAAACAAA+CGG - chr4_4:39644137-39644156 None:intergenic 25.0%
!! CCTAATAGCTTTTCATTTTA+GGG - chr4_4:39644261-39644280 None:intergenic 25.0%
!! TCCTAATAGCTTTTCATTTT+AGG - chr4_4:39644262-39644281 None:intergenic 25.0%
! CAACATATATGATTACATTC+AGG - chr4_4:39644486-39644505 None:intergenic 25.0%
! CTGAATGTAATCATATATGT+TGG + chr4_4:39644484-39644503 Msa0680550:intron 25.0%
! TGCATCTTTAATATAGAGAA+AGG - chr4_4:39645294-39645313 None:intergenic 25.0%
! CTATATTAAAGATGCAATTG+AGG + chr4_4:39645298-39645317 Msa0680550:CDS 25.0%
! TAACAGATACTTCATTATCT+GGG - chr4_4:39645460-39645479 None:intergenic 25.0%
! TTAACAGATACTTCATTATC+TGG - chr4_4:39645461-39645480 None:intergenic 25.0%
! TCAAGAGAAATAAACAACTT+TGG + chr4_4:39645550-39645569 Msa0680550:intron 25.0%
! TTTCATTAAGGTATATGCAA+AGG + chr4_4:39645585-39645604 Msa0680550:intron 25.0%
! TCAAATCTTCAACAAAATCA+CGG - chr4_4:39645808-39645827 None:intergenic 25.0%
! TATATGATACACTAATTGTG+AGG + chr4_4:39646123-39646142 Msa0680550:three_prime_UTR 25.0%
! TCATTTGATGAAACTCAATA+CGG - chr4_4:39643532-39643551 None:intergenic 25.0%
! TTACTGTAAATAGTATCCAA+AGG - chr4_4:39643766-39643785 None:intergenic 25.0%
! AAAATAAATAACTTACCACC+GGG - chr4_4:39643804-39643823 None:intergenic 25.0%
! TTATAATGAGTTGTGATTGA+TGG + chr4_4:39643872-39643891 Msa0680550:intron 25.0%
! TACAGCAATAATCTCTTTAT+GGG + chr4_4:39644013-39644032 Msa0680550:intron 25.0%
! TAAGAAAATGAAAGTGATTG+AGG + chr4_4:39644109-39644128 Msa0680550:intron 25.0%
! AAGAAAATGAAAGTGATTGA+GGG + chr4_4:39644110-39644129 Msa0680550:intron 25.0%
!! TGGAAAAAATCTGAAACAAA+CGG - chr4_4:39644137-39644156 None:intergenic 25.0%
!! CCTAATAGCTTTTCATTTTA+GGG - chr4_4:39644261-39644280 None:intergenic 25.0%
!! TCCTAATAGCTTTTCATTTT+AGG - chr4_4:39644262-39644281 None:intergenic 25.0%
! CAACATATATGATTACATTC+AGG - chr4_4:39644486-39644505 None:intergenic 25.0%
! CTGAATGTAATCATATATGT+TGG + chr4_4:39644484-39644503 Msa0680550:intron 25.0%
! TGCATCTTTAATATAGAGAA+AGG - chr4_4:39645294-39645313 None:intergenic 25.0%
! CTATATTAAAGATGCAATTG+AGG + chr4_4:39645298-39645317 Msa0680550:CDS 25.0%
! TAACAGATACTTCATTATCT+GGG - chr4_4:39645460-39645479 None:intergenic 25.0%
! TTAACAGATACTTCATTATC+TGG - chr4_4:39645461-39645480 None:intergenic 25.0%
! TCAAGAGAAATAAACAACTT+TGG + chr4_4:39645550-39645569 Msa0680550:intron 25.0%
! TTTCATTAAGGTATATGCAA+AGG + chr4_4:39645585-39645604 Msa0680550:intron 25.0%
! TCAAATCTTCAACAAAATCA+CGG - chr4_4:39645808-39645827 None:intergenic 25.0%
! TATATGATACACTAATTGTG+AGG + chr4_4:39646123-39646142 Msa0680550:three_prime_UTR 25.0%
!!! CTGGTTTCTTTTTTTCAAGA+TGG - chr4_4:39643227-39643246 None:intergenic 30.0%
TGTGGAAGTTAGTTAATAAC+TGG - chr4_4:39643246-39643265 None:intergenic 30.0%
ACAAGAAAATGGAAAAGAAG+AGG - chr4_4:39643614-39643633 None:intergenic 30.0%
GTACAGCAATAATCTCTTTA+TGG + chr4_4:39644012-39644031 Msa0680550:intron 30.0%
! GGAAAAAATCTGAAACAAAC+GGG - chr4_4:39644136-39644155 None:intergenic 30.0%
CCCTAAAATGAAAAGCTATT+AGG + chr4_4:39644258-39644277 Msa0680550:intron 30.0%
TCTTTGAGCTTGTAATATTG+AGG - chr4_4:39644644-39644663 None:intergenic 30.0%
!! AATTTCTTAACTTGTGTCGA+TGG - chr4_4:39644838-39644857 None:intergenic 30.0%
AATATAGAGAAAGGTTCTCT+GGG - chr4_4:39645285-39645304 None:intergenic 30.0%
TAATATAGAGAAAGGTTCTC+TGG - chr4_4:39645286-39645305 None:intergenic 30.0%
AAATGGACACATCTTTAATG+TGG + chr4_4:39645430-39645449 Msa0680550:CDS 30.0%
AATGGACACATCTTTAATGT+GGG + chr4_4:39645431-39645450 Msa0680550:CDS 30.0%
! TCAGAAGTTTTCTATGGTAA+AGG + chr4_4:39645652-39645671 Msa0680550:CDS 30.0%
CTGTTTATTCTTGTGAGTTT+AGG + chr4_4:39645904-39645923 Msa0680550:intron 30.0%
TTATTCTTGTGAGTTTAGGT+TGG + chr4_4:39645908-39645927 Msa0680550:intron 30.0%
TGTCTGATGTTGATATTGAA+GGG - chr4_4:39645971-39645990 None:intergenic 30.0%
ATGTCTGATGTTGATATTGA+AGG - chr4_4:39645972-39645991 None:intergenic 30.0%
AGCAGAAGATATATGACTAT+AGG - chr4_4:39646173-39646192 None:intergenic 30.0%
! GTTCAAAAATCTAGAGTTAC+AGG - chr4_4:39646203-39646222 None:intergenic 30.0%
!!! CTGGTTTCTTTTTTTCAAGA+TGG - chr4_4:39643227-39643246 None:intergenic 30.0%
TGTGGAAGTTAGTTAATAAC+TGG - chr4_4:39643246-39643265 None:intergenic 30.0%
ACAAGAAAATGGAAAAGAAG+AGG - chr4_4:39643614-39643633 None:intergenic 30.0%
GTACAGCAATAATCTCTTTA+TGG + chr4_4:39644012-39644031 Msa0680550:intron 30.0%
! GGAAAAAATCTGAAACAAAC+GGG - chr4_4:39644136-39644155 None:intergenic 30.0%
CCCTAAAATGAAAAGCTATT+AGG + chr4_4:39644258-39644277 Msa0680550:intron 30.0%
TCTTTGAGCTTGTAATATTG+AGG - chr4_4:39644644-39644663 None:intergenic 30.0%
!! AATTTCTTAACTTGTGTCGA+TGG - chr4_4:39644838-39644857 None:intergenic 30.0%
AATATAGAGAAAGGTTCTCT+GGG - chr4_4:39645285-39645304 None:intergenic 30.0%
TAATATAGAGAAAGGTTCTC+TGG - chr4_4:39645286-39645305 None:intergenic 30.0%
AAATGGACACATCTTTAATG+TGG + chr4_4:39645430-39645449 Msa0680550:CDS 30.0%
AATGGACACATCTTTAATGT+GGG + chr4_4:39645431-39645450 Msa0680550:CDS 30.0%
! TCAGAAGTTTTCTATGGTAA+AGG + chr4_4:39645652-39645671 Msa0680550:CDS 30.0%
CTGTTTATTCTTGTGAGTTT+AGG + chr4_4:39645904-39645923 Msa0680550:intron 30.0%
TTATTCTTGTGAGTTTAGGT+TGG + chr4_4:39645908-39645927 Msa0680550:intron 30.0%
TGTCTGATGTTGATATTGAA+GGG - chr4_4:39645971-39645990 None:intergenic 30.0%
ATGTCTGATGTTGATATTGA+AGG - chr4_4:39645972-39645991 None:intergenic 30.0%
AGCAGAAGATATATGACTAT+AGG - chr4_4:39646173-39646192 None:intergenic 30.0%
! GTTCAAAAATCTAGAGTTAC+AGG - chr4_4:39646203-39646222 None:intergenic 30.0%
!!! CTGGTTTCTTTTTTTCAAGA+TGG - chr4_4:39643227-39643246 None:intergenic 30.0%
TGTGGAAGTTAGTTAATAAC+TGG - chr4_4:39643246-39643265 None:intergenic 30.0%
ACAAGAAAATGGAAAAGAAG+AGG - chr4_4:39643614-39643633 None:intergenic 30.0%
GTACAGCAATAATCTCTTTA+TGG + chr4_4:39644012-39644031 Msa0680550:intron 30.0%
! GGAAAAAATCTGAAACAAAC+GGG - chr4_4:39644136-39644155 None:intergenic 30.0%
CCCTAAAATGAAAAGCTATT+AGG + chr4_4:39644258-39644277 Msa0680550:intron 30.0%
TCTTTGAGCTTGTAATATTG+AGG - chr4_4:39644644-39644663 None:intergenic 30.0%
!! AATTTCTTAACTTGTGTCGA+TGG - chr4_4:39644838-39644857 None:intergenic 30.0%
AATATAGAGAAAGGTTCTCT+GGG - chr4_4:39645285-39645304 None:intergenic 30.0%
TAATATAGAGAAAGGTTCTC+TGG - chr4_4:39645286-39645305 None:intergenic 30.0%
AAATGGACACATCTTTAATG+TGG + chr4_4:39645430-39645449 Msa0680550:CDS 30.0%
AATGGACACATCTTTAATGT+GGG + chr4_4:39645431-39645450 Msa0680550:CDS 30.0%
! TCAGAAGTTTTCTATGGTAA+AGG + chr4_4:39645652-39645671 Msa0680550:CDS 30.0%
CTGTTTATTCTTGTGAGTTT+AGG + chr4_4:39645904-39645923 Msa0680550:intron 30.0%
TTATTCTTGTGAGTTTAGGT+TGG + chr4_4:39645908-39645927 Msa0680550:intron 30.0%
TGTCTGATGTTGATATTGAA+GGG - chr4_4:39645971-39645990 None:intergenic 30.0%
ATGTCTGATGTTGATATTGA+AGG - chr4_4:39645972-39645991 None:intergenic 30.0%
AGCAGAAGATATATGACTAT+AGG - chr4_4:39646173-39646192 None:intergenic 30.0%
! GTTCAAAAATCTAGAGTTAC+AGG - chr4_4:39646203-39646222 None:intergenic 30.0%
TTCAAGATGGTGATTGAAGA+AGG - chr4_4:39643214-39643233 None:intergenic 35.0%
!! TATGGCTTTGTGAGATGTTT+CGG - chr4_4:39643447-39643466 None:intergenic 35.0%
!! GAGATGATTGATTTTCTCAG+AGG - chr4_4:39643483-39643502 None:intergenic 35.0%
! AAGCTTTGACAAGAGTTTCA+AGG - chr4_4:39643574-39643593 None:intergenic 35.0%
TAATTTCATTGATGCGATCC+CGG + chr4_4:39643783-39643802 Msa0680550:CDS 35.0%
CGATATTGACACGTAGATAA+TGG + chr4_4:39644078-39644097 Msa0680550:intron 35.0%
!! ATATGTTGGTGTCATGATGT+TGG + chr4_4:39644498-39644517 Msa0680550:intron 35.0%
AACACAAATTTGCATCATGC+AGG + chr4_4:39644616-39644635 Msa0680550:intron 35.0%
! GATGTGAGTCCTTGTATTTT+TGG + chr4_4:39644665-39644684 Msa0680550:CDS 35.0%
TGAACTGGACCAAAAATACA+AGG - chr4_4:39644677-39644696 None:intergenic 35.0%
GGCTCATTTATGGTAAACAA+AGG + chr4_4:39644741-39644760 Msa0680550:intron 35.0%
ATGGTTTCAATCTGACATGT+CGG + chr4_4:39644898-39644917 Msa0680550:intron 35.0%
TAAATCTATAGCTGAGCATG+CGG + chr4_4:39644990-39645009 Msa0680550:intron 35.0%
CTATTGTGAGACCTTATAAC+TGG + chr4_4:39645031-39645050 Msa0680550:CDS 35.0%
TGAAACAAGCTAAAACTCTG+GGG - chr4_4:39645110-39645129 None:intergenic 35.0%
CTGAAACAAGCTAAAACTCT+GGG - chr4_4:39645111-39645130 None:intergenic 35.0%
ACTGAAACAAGCTAAAACTC+TGG - chr4_4:39645112-39645131 None:intergenic 35.0%
! GAAGCTTTGTGAAAAAACAG+CGG - chr4_4:39645207-39645226 None:intergenic 35.0%
TATGCTATCATGTAACATGC+AGG + chr4_4:39645391-39645410 Msa0680550:intron 35.0%
CATTAAGGTATATGCAAAGG+TGG + chr4_4:39645588-39645607 Msa0680550:intron 35.0%
! GTGAGTTCAGAAGTTTTCTA+TGG + chr4_4:39645646-39645665 Msa0680550:CDS 35.0%
TGGTGATAATTGTCATGTCA+GGG - chr4_4:39645702-39645721 None:intergenic 35.0%
! TTGGTGATAATTGTCATGTC+AGG - chr4_4:39645703-39645722 None:intergenic 35.0%
GATTCTTGCAAACTCATTGT+TGG + chr4_4:39645864-39645883 Msa0680550:intron 35.0%
AGTTCATCAAGAGATGTCTT+TGG - chr4_4:39645937-39645956 None:intergenic 35.0%
ATTTGTCAGATTGTCTCTCA+TGG - chr4_4:39646102-39646121 None:intergenic 35.0%
TTCAAGATGGTGATTGAAGA+AGG - chr4_4:39643214-39643233 None:intergenic 35.0%
!! TATGGCTTTGTGAGATGTTT+CGG - chr4_4:39643447-39643466 None:intergenic 35.0%
!! GAGATGATTGATTTTCTCAG+AGG - chr4_4:39643483-39643502 None:intergenic 35.0%
! AAGCTTTGACAAGAGTTTCA+AGG - chr4_4:39643574-39643593 None:intergenic 35.0%
TAATTTCATTGATGCGATCC+CGG + chr4_4:39643783-39643802 Msa0680550:CDS 35.0%
CGATATTGACACGTAGATAA+TGG + chr4_4:39644078-39644097 Msa0680550:intron 35.0%
!! ATATGTTGGTGTCATGATGT+TGG + chr4_4:39644498-39644517 Msa0680550:intron 35.0%
AACACAAATTTGCATCATGC+AGG + chr4_4:39644616-39644635 Msa0680550:intron 35.0%
! GATGTGAGTCCTTGTATTTT+TGG + chr4_4:39644665-39644684 Msa0680550:CDS 35.0%
TGAACTGGACCAAAAATACA+AGG - chr4_4:39644677-39644696 None:intergenic 35.0%
GGCTCATTTATGGTAAACAA+AGG + chr4_4:39644741-39644760 Msa0680550:intron 35.0%
ATGGTTTCAATCTGACATGT+CGG + chr4_4:39644898-39644917 Msa0680550:intron 35.0%
TAAATCTATAGCTGAGCATG+CGG + chr4_4:39644990-39645009 Msa0680550:intron 35.0%
CTATTGTGAGACCTTATAAC+TGG + chr4_4:39645031-39645050 Msa0680550:CDS 35.0%
TGAAACAAGCTAAAACTCTG+GGG - chr4_4:39645110-39645129 None:intergenic 35.0%
CTGAAACAAGCTAAAACTCT+GGG - chr4_4:39645111-39645130 None:intergenic 35.0%
ACTGAAACAAGCTAAAACTC+TGG - chr4_4:39645112-39645131 None:intergenic 35.0%
! GAAGCTTTGTGAAAAAACAG+CGG - chr4_4:39645207-39645226 None:intergenic 35.0%
TATGCTATCATGTAACATGC+AGG + chr4_4:39645391-39645410 Msa0680550:intron 35.0%
CATTAAGGTATATGCAAAGG+TGG + chr4_4:39645588-39645607 Msa0680550:intron 35.0%
! GTGAGTTCAGAAGTTTTCTA+TGG + chr4_4:39645646-39645665 Msa0680550:CDS 35.0%
TGGTGATAATTGTCATGTCA+GGG - chr4_4:39645702-39645721 None:intergenic 35.0%
! TTGGTGATAATTGTCATGTC+AGG - chr4_4:39645703-39645722 None:intergenic 35.0%
GATTCTTGCAAACTCATTGT+TGG + chr4_4:39645864-39645883 Msa0680550:intron 35.0%
AGTTCATCAAGAGATGTCTT+TGG - chr4_4:39645937-39645956 None:intergenic 35.0%
ATTTGTCAGATTGTCTCTCA+TGG - chr4_4:39646102-39646121 None:intergenic 35.0%
TTCAAGATGGTGATTGAAGA+AGG - chr4_4:39643214-39643233 None:intergenic 35.0%
!! TATGGCTTTGTGAGATGTTT+CGG - chr4_4:39643447-39643466 None:intergenic 35.0%
!! GAGATGATTGATTTTCTCAG+AGG - chr4_4:39643483-39643502 None:intergenic 35.0%
! AAGCTTTGACAAGAGTTTCA+AGG - chr4_4:39643574-39643593 None:intergenic 35.0%
TAATTTCATTGATGCGATCC+CGG + chr4_4:39643783-39643802 Msa0680550:CDS 35.0%
CGATATTGACACGTAGATAA+TGG + chr4_4:39644078-39644097 Msa0680550:intron 35.0%
!! ATATGTTGGTGTCATGATGT+TGG + chr4_4:39644498-39644517 Msa0680550:intron 35.0%
AACACAAATTTGCATCATGC+AGG + chr4_4:39644616-39644635 Msa0680550:intron 35.0%
! GATGTGAGTCCTTGTATTTT+TGG + chr4_4:39644665-39644684 Msa0680550:CDS 35.0%
TGAACTGGACCAAAAATACA+AGG - chr4_4:39644677-39644696 None:intergenic 35.0%
GGCTCATTTATGGTAAACAA+AGG + chr4_4:39644741-39644760 Msa0680550:intron 35.0%
ATGGTTTCAATCTGACATGT+CGG + chr4_4:39644898-39644917 Msa0680550:intron 35.0%
TAAATCTATAGCTGAGCATG+CGG + chr4_4:39644990-39645009 Msa0680550:intron 35.0%
CTATTGTGAGACCTTATAAC+TGG + chr4_4:39645031-39645050 Msa0680550:CDS 35.0%
TGAAACAAGCTAAAACTCTG+GGG - chr4_4:39645110-39645129 None:intergenic 35.0%
CTGAAACAAGCTAAAACTCT+GGG - chr4_4:39645111-39645130 None:intergenic 35.0%
ACTGAAACAAGCTAAAACTC+TGG - chr4_4:39645112-39645131 None:intergenic 35.0%
! GAAGCTTTGTGAAAAAACAG+CGG - chr4_4:39645207-39645226 None:intergenic 35.0%
TATGCTATCATGTAACATGC+AGG + chr4_4:39645391-39645410 Msa0680550:intron 35.0%
CATTAAGGTATATGCAAAGG+TGG + chr4_4:39645588-39645607 Msa0680550:intron 35.0%
! GTGAGTTCAGAAGTTTTCTA+TGG + chr4_4:39645646-39645665 Msa0680550:CDS 35.0%
TGGTGATAATTGTCATGTCA+GGG - chr4_4:39645702-39645721 None:intergenic 35.0%
! TTGGTGATAATTGTCATGTC+AGG - chr4_4:39645703-39645722 None:intergenic 35.0%
GATTCTTGCAAACTCATTGT+TGG + chr4_4:39645864-39645883 Msa0680550:intron 35.0%
AGTTCATCAAGAGATGTCTT+TGG - chr4_4:39645937-39645956 None:intergenic 35.0%
ATTTGTCAGATTGTCTCTCA+TGG - chr4_4:39646102-39646121 None:intergenic 35.0%
GAAAGAGAATAAGGTGTGTG+TGG - chr4_4:39643264-39643283 None:intergenic 40.0%
GAGGAAGAGGAAAGAGAATA+AGG - chr4_4:39643273-39643292 None:intergenic 40.0%
AGAAGAGAGAAAATGCAGAG+AGG - chr4_4:39643292-39643311 None:intergenic 40.0%
CATATTGAGATCGGTGTGAT+TGG - chr4_4:39643371-39643390 None:intergenic 40.0%
CCGATCATGCATATTGAGAT+CGG - chr4_4:39643380-39643399 None:intergenic 40.0%
CCGATCTCAATATGCATGAT+CGG + chr4_4:39643377-39643396 Msa0680550:CDS 40.0%
ATCTCAATATGCATGATCGG+CGG + chr4_4:39643380-39643399 Msa0680550:CDS 40.0%
! TGTTTCGGACATCAGCTTTT+CGG - chr4_4:39643432-39643451 None:intergenic 40.0%
AGAGGAGACATCAATGACTA+TGG - chr4_4:39643465-39643484 None:intergenic 40.0%
TCCTTGATAAGTCTCATCCT+TGG + chr4_4:39643501-39643520 Msa0680550:CDS 40.0%
CCTTGATAAGTCTCATCCTT+GGG + chr4_4:39643502-39643521 Msa0680550:CDS 40.0%
!! GATTCACTTTTCTACGTGTG+AGG + chr4_4:39643942-39643961 Msa0680550:CDS 40.0%
! TTTTCTACGTGTGAGGTCTT+TGG + chr4_4:39643949-39643968 Msa0680550:CDS 40.0%
TTTCTACGTGTGAGGTCTTT+GGG + chr4_4:39643950-39643969 Msa0680550:CDS 40.0%
TGTACCTTTCTATACTCCTC+AGG - chr4_4:39643997-39644016 None:intergenic 40.0%
TTGGTCCAGTTCATAAACAG+AGG + chr4_4:39644684-39644703 Msa0680550:CDS 40.0%
ATGACAGACAGGCTCATTTA+TGG + chr4_4:39644731-39644750 Msa0680550:CDS 40.0%
TCAATGTCAGTATGTGTGTC+TGG - chr4_4:39644815-39644834 None:intergenic 40.0%
TCAGTGTCAGACATCTTACA+TGG + chr4_4:39644879-39644898 Msa0680550:intron 40.0%
GTGAGACCTTATAACTGGAT+TGG + chr4_4:39645036-39645055 Msa0680550:CDS 40.0%
CTTGGTCCAATCCAGTTATA+AGG - chr4_4:39645045-39645064 None:intergenic 40.0%
! TAACTGGATTGGACCAAGAA+TGG + chr4_4:39645047-39645066 Msa0680550:CDS 40.0%
CATGAACAAGAAACAGAAGC+AGG - chr4_4:39645151-39645170 None:intergenic 40.0%
GATAACCCTGATAGAGCAAA+TGG + chr4_4:39645413-39645432 Msa0680550:CDS 40.0%
TGTGTCCATTTGCTCTATCA+GGG - chr4_4:39645421-39645440 None:intergenic 40.0%
ATGTGTCCATTTGCTCTATC+AGG - chr4_4:39645422-39645441 None:intergenic 40.0%
AGCTACCTTTATCATCAGCT+CGG - chr4_4:39645492-39645511 None:intergenic 40.0%
!! TCCAGAGTTGATAGACTAGA+GGG - chr4_4:39645625-39645644 None:intergenic 40.0%
!! ATCCAGAGTTGATAGACTAG+AGG - chr4_4:39645626-39645645 None:intergenic 40.0%
ACAATTATCACCAAGCAGCT+TGG + chr4_4:39645709-39645728 Msa0680550:CDS 40.0%
AGAATCACAATGCGCAACTA+TGG - chr4_4:39645850-39645869 None:intergenic 40.0%
GACATCTCTTGATGAACTGT+TGG + chr4_4:39645939-39645958 Msa0680550:CDS 40.0%
! AGCAACTCTGCAAGTTGAAT+TGG + chr4_4:39646035-39646054 Msa0680550:exon 40.0%
GCAAGAGACAAATAAGGGAA+GGG - chr4_4:39646231-39646250 None:intergenic 40.0%
AGCAAGAGACAAATAAGGGA+AGG - chr4_4:39646232-39646251 None:intergenic 40.0%
GGGAAGCAAGAGACAAATAA+GGG - chr4_4:39646236-39646255 None:intergenic 40.0%
AGGGAAGCAAGAGACAAATA+AGG - chr4_4:39646237-39646256 None:intergenic 40.0%
GAAAGAGAATAAGGTGTGTG+TGG - chr4_4:39643264-39643283 None:intergenic 40.0%
GAGGAAGAGGAAAGAGAATA+AGG - chr4_4:39643273-39643292 None:intergenic 40.0%
AGAAGAGAGAAAATGCAGAG+AGG - chr4_4:39643292-39643311 None:intergenic 40.0%
CATATTGAGATCGGTGTGAT+TGG - chr4_4:39643371-39643390 None:intergenic 40.0%
CCGATCATGCATATTGAGAT+CGG - chr4_4:39643380-39643399 None:intergenic 40.0%
CCGATCTCAATATGCATGAT+CGG + chr4_4:39643377-39643396 Msa0680550:CDS 40.0%
ATCTCAATATGCATGATCGG+CGG + chr4_4:39643380-39643399 Msa0680550:CDS 40.0%
! TGTTTCGGACATCAGCTTTT+CGG - chr4_4:39643432-39643451 None:intergenic 40.0%
AGAGGAGACATCAATGACTA+TGG - chr4_4:39643465-39643484 None:intergenic 40.0%
TCCTTGATAAGTCTCATCCT+TGG + chr4_4:39643501-39643520 Msa0680550:CDS 40.0%
CCTTGATAAGTCTCATCCTT+GGG + chr4_4:39643502-39643521 Msa0680550:CDS 40.0%
!! GATTCACTTTTCTACGTGTG+AGG + chr4_4:39643942-39643961 Msa0680550:CDS 40.0%
! TTTTCTACGTGTGAGGTCTT+TGG + chr4_4:39643949-39643968 Msa0680550:CDS 40.0%
TTTCTACGTGTGAGGTCTTT+GGG + chr4_4:39643950-39643969 Msa0680550:CDS 40.0%
TGTACCTTTCTATACTCCTC+AGG - chr4_4:39643997-39644016 None:intergenic 40.0%
TTGGTCCAGTTCATAAACAG+AGG + chr4_4:39644684-39644703 Msa0680550:CDS 40.0%
ATGACAGACAGGCTCATTTA+TGG + chr4_4:39644731-39644750 Msa0680550:CDS 40.0%
TCAATGTCAGTATGTGTGTC+TGG - chr4_4:39644815-39644834 None:intergenic 40.0%
TCAGTGTCAGACATCTTACA+TGG + chr4_4:39644879-39644898 Msa0680550:intron 40.0%
GTGAGACCTTATAACTGGAT+TGG + chr4_4:39645036-39645055 Msa0680550:CDS 40.0%
CTTGGTCCAATCCAGTTATA+AGG - chr4_4:39645045-39645064 None:intergenic 40.0%
! TAACTGGATTGGACCAAGAA+TGG + chr4_4:39645047-39645066 Msa0680550:CDS 40.0%
CATGAACAAGAAACAGAAGC+AGG - chr4_4:39645151-39645170 None:intergenic 40.0%
GATAACCCTGATAGAGCAAA+TGG + chr4_4:39645413-39645432 Msa0680550:CDS 40.0%
TGTGTCCATTTGCTCTATCA+GGG - chr4_4:39645421-39645440 None:intergenic 40.0%
ATGTGTCCATTTGCTCTATC+AGG - chr4_4:39645422-39645441 None:intergenic 40.0%
AGCTACCTTTATCATCAGCT+CGG - chr4_4:39645492-39645511 None:intergenic 40.0%
!! TCCAGAGTTGATAGACTAGA+GGG - chr4_4:39645625-39645644 None:intergenic 40.0%
!! ATCCAGAGTTGATAGACTAG+AGG - chr4_4:39645626-39645645 None:intergenic 40.0%
ACAATTATCACCAAGCAGCT+TGG + chr4_4:39645709-39645728 Msa0680550:CDS 40.0%
AGAATCACAATGCGCAACTA+TGG - chr4_4:39645850-39645869 None:intergenic 40.0%
GACATCTCTTGATGAACTGT+TGG + chr4_4:39645939-39645958 Msa0680550:CDS 40.0%
! AGCAACTCTGCAAGTTGAAT+TGG + chr4_4:39646035-39646054 Msa0680550:exon 40.0%
GCAAGAGACAAATAAGGGAA+GGG - chr4_4:39646231-39646250 None:intergenic 40.0%
AGCAAGAGACAAATAAGGGA+AGG - chr4_4:39646232-39646251 None:intergenic 40.0%
GGGAAGCAAGAGACAAATAA+GGG - chr4_4:39646236-39646255 None:intergenic 40.0%
AGGGAAGCAAGAGACAAATA+AGG - chr4_4:39646237-39646256 None:intergenic 40.0%
GAAAGAGAATAAGGTGTGTG+TGG - chr4_4:39643264-39643283 None:intergenic 40.0%
GAGGAAGAGGAAAGAGAATA+AGG - chr4_4:39643273-39643292 None:intergenic 40.0%
AGAAGAGAGAAAATGCAGAG+AGG - chr4_4:39643292-39643311 None:intergenic 40.0%
CATATTGAGATCGGTGTGAT+TGG - chr4_4:39643371-39643390 None:intergenic 40.0%
CCGATCATGCATATTGAGAT+CGG - chr4_4:39643380-39643399 None:intergenic 40.0%
CCGATCTCAATATGCATGAT+CGG + chr4_4:39643377-39643396 Msa0680550:CDS 40.0%
ATCTCAATATGCATGATCGG+CGG + chr4_4:39643380-39643399 Msa0680550:CDS 40.0%
! TGTTTCGGACATCAGCTTTT+CGG - chr4_4:39643432-39643451 None:intergenic 40.0%
AGAGGAGACATCAATGACTA+TGG - chr4_4:39643465-39643484 None:intergenic 40.0%
TCCTTGATAAGTCTCATCCT+TGG + chr4_4:39643501-39643520 Msa0680550:CDS 40.0%
CCTTGATAAGTCTCATCCTT+GGG + chr4_4:39643502-39643521 Msa0680550:CDS 40.0%
!! GATTCACTTTTCTACGTGTG+AGG + chr4_4:39643942-39643961 Msa0680550:CDS 40.0%
! TTTTCTACGTGTGAGGTCTT+TGG + chr4_4:39643949-39643968 Msa0680550:CDS 40.0%
TTTCTACGTGTGAGGTCTTT+GGG + chr4_4:39643950-39643969 Msa0680550:CDS 40.0%
TGTACCTTTCTATACTCCTC+AGG - chr4_4:39643997-39644016 None:intergenic 40.0%
TTGGTCCAGTTCATAAACAG+AGG + chr4_4:39644684-39644703 Msa0680550:CDS 40.0%
ATGACAGACAGGCTCATTTA+TGG + chr4_4:39644731-39644750 Msa0680550:CDS 40.0%
TCAATGTCAGTATGTGTGTC+TGG - chr4_4:39644815-39644834 None:intergenic 40.0%
TCAGTGTCAGACATCTTACA+TGG + chr4_4:39644879-39644898 Msa0680550:intron 40.0%
GTGAGACCTTATAACTGGAT+TGG + chr4_4:39645036-39645055 Msa0680550:CDS 40.0%
CTTGGTCCAATCCAGTTATA+AGG - chr4_4:39645045-39645064 None:intergenic 40.0%
! TAACTGGATTGGACCAAGAA+TGG + chr4_4:39645047-39645066 Msa0680550:CDS 40.0%
CATGAACAAGAAACAGAAGC+AGG - chr4_4:39645151-39645170 None:intergenic 40.0%
GATAACCCTGATAGAGCAAA+TGG + chr4_4:39645413-39645432 Msa0680550:CDS 40.0%
TGTGTCCATTTGCTCTATCA+GGG - chr4_4:39645421-39645440 None:intergenic 40.0%
ATGTGTCCATTTGCTCTATC+AGG - chr4_4:39645422-39645441 None:intergenic 40.0%
AGCTACCTTTATCATCAGCT+CGG - chr4_4:39645492-39645511 None:intergenic 40.0%
!! TCCAGAGTTGATAGACTAGA+GGG - chr4_4:39645625-39645644 None:intergenic 40.0%
!! ATCCAGAGTTGATAGACTAG+AGG - chr4_4:39645626-39645645 None:intergenic 40.0%
ACAATTATCACCAAGCAGCT+TGG + chr4_4:39645709-39645728 Msa0680550:CDS 40.0%
AGAATCACAATGCGCAACTA+TGG - chr4_4:39645850-39645869 None:intergenic 40.0%
GACATCTCTTGATGAACTGT+TGG + chr4_4:39645939-39645958 Msa0680550:CDS 40.0%
! AGCAACTCTGCAAGTTGAAT+TGG + chr4_4:39646035-39646054 Msa0680550:exon 40.0%
GCAAGAGACAAATAAGGGAA+GGG - chr4_4:39646231-39646250 None:intergenic 40.0%
AGCAAGAGACAAATAAGGGA+AGG - chr4_4:39646232-39646251 None:intergenic 40.0%
GGGAAGCAAGAGACAAATAA+GGG - chr4_4:39646236-39646255 None:intergenic 40.0%
AGGGAAGCAAGAGACAAATA+AGG - chr4_4:39646237-39646256 None:intergenic 40.0%
GAGAAAATGCAGAGAGGAAG+AGG - chr4_4:39643286-39643305 None:intergenic 45.0%
CAACACACGCAAAAGCTTCA+TGG + chr4_4:39643322-39643341 Msa0680550:exon 45.0%
CCCAAGGATGAGACTTATCA+AGG - chr4_4:39643505-39643524 None:intergenic 45.0%
! AACTCAATACGGTTAGCCCA+AGG - chr4_4:39643521-39643540 None:intergenic 45.0%
! GAGGTCTTTGGGAAGACAAT+TGG + chr4_4:39643961-39643980 Msa0680550:CDS 45.0%
! AATTGGTAGCTTTCTGCCTG+AGG + chr4_4:39643978-39643997 Msa0680550:CDS 45.0%
! TCTGCCTGAGGAGTATAGAA+AGG + chr4_4:39643990-39644009 Msa0680550:CDS 45.0%
TGTTGGACACTGACATGTGT+CGG + chr4_4:39644515-39644534 Msa0680550:intron 45.0%
GTCCAGTTCATAAACAGAGG+TGG + chr4_4:39644687-39644706 Msa0680550:CDS 45.0%
GACCACCTCTGTTTATGAAC+TGG - chr4_4:39644692-39644711 None:intergenic 45.0%
GTGCAAAGCAAATGACAGAC+AGG + chr4_4:39644720-39644739 Msa0680550:CDS 45.0%
CCAGGAATGAAGTCCATTCT+TGG - chr4_4:39645063-39645082 None:intergenic 45.0%
! CCAAGAATGGACTTCATTCC+TGG + chr4_4:39645060-39645079 Msa0680550:CDS 45.0%
! AATGGACTTCATTCCTGGTG+TGG + chr4_4:39645065-39645084 Msa0680550:CDS 45.0%
CCACCATCAACAAGTTTGAG+CGG - chr4_4:39645257-39645276 None:intergenic 45.0%
ACTAGCCGAGCTGATGATAA+AGG + chr4_4:39645484-39645503 Msa0680550:CDS 45.0%
AAGGTATATGCAAAGGTGGC+TGG + chr4_4:39645592-39645611 Msa0680550:intron 45.0%
!! AGAGTTGATAGACTAGAGGG+AGG - chr4_4:39645622-39645641 None:intergenic 45.0%
TCCCTCTAGTCTATCAACTC+TGG + chr4_4:39645621-39645640 Msa0680550:CDS 45.0%
TGACAGAATACCAAGCTGCT+TGG - chr4_4:39645722-39645741 None:intergenic 45.0%
!! TGCAGAGTTGCTCAAGTTGA+AGG - chr4_4:39646027-39646046 None:intergenic 45.0%
GAGAAAATGCAGAGAGGAAG+AGG - chr4_4:39643286-39643305 None:intergenic 45.0%
CAACACACGCAAAAGCTTCA+TGG + chr4_4:39643322-39643341 Msa0680550:exon 45.0%
CCCAAGGATGAGACTTATCA+AGG - chr4_4:39643505-39643524 None:intergenic 45.0%
! AACTCAATACGGTTAGCCCA+AGG - chr4_4:39643521-39643540 None:intergenic 45.0%
! GAGGTCTTTGGGAAGACAAT+TGG + chr4_4:39643961-39643980 Msa0680550:CDS 45.0%
! AATTGGTAGCTTTCTGCCTG+AGG + chr4_4:39643978-39643997 Msa0680550:CDS 45.0%
! TCTGCCTGAGGAGTATAGAA+AGG + chr4_4:39643990-39644009 Msa0680550:CDS 45.0%
TGTTGGACACTGACATGTGT+CGG + chr4_4:39644515-39644534 Msa0680550:intron 45.0%
GTCCAGTTCATAAACAGAGG+TGG + chr4_4:39644687-39644706 Msa0680550:CDS 45.0%
GACCACCTCTGTTTATGAAC+TGG - chr4_4:39644692-39644711 None:intergenic 45.0%
GTGCAAAGCAAATGACAGAC+AGG + chr4_4:39644720-39644739 Msa0680550:CDS 45.0%
CCAGGAATGAAGTCCATTCT+TGG - chr4_4:39645063-39645082 None:intergenic 45.0%
! CCAAGAATGGACTTCATTCC+TGG + chr4_4:39645060-39645079 Msa0680550:CDS 45.0%
! AATGGACTTCATTCCTGGTG+TGG + chr4_4:39645065-39645084 Msa0680550:CDS 45.0%
CCACCATCAACAAGTTTGAG+CGG - chr4_4:39645257-39645276 None:intergenic 45.0%
ACTAGCCGAGCTGATGATAA+AGG + chr4_4:39645484-39645503 Msa0680550:CDS 45.0%
AAGGTATATGCAAAGGTGGC+TGG + chr4_4:39645592-39645611 Msa0680550:intron 45.0%
!! AGAGTTGATAGACTAGAGGG+AGG - chr4_4:39645622-39645641 None:intergenic 45.0%
TCCCTCTAGTCTATCAACTC+TGG + chr4_4:39645621-39645640 Msa0680550:CDS 45.0%
TGACAGAATACCAAGCTGCT+TGG - chr4_4:39645722-39645741 None:intergenic 45.0%
!! TGCAGAGTTGCTCAAGTTGA+AGG - chr4_4:39646027-39646046 None:intergenic 45.0%
GAGAAAATGCAGAGAGGAAG+AGG - chr4_4:39643286-39643305 None:intergenic 45.0%
CAACACACGCAAAAGCTTCA+TGG + chr4_4:39643322-39643341 Msa0680550:exon 45.0%
CCCAAGGATGAGACTTATCA+AGG - chr4_4:39643505-39643524 None:intergenic 45.0%
! AACTCAATACGGTTAGCCCA+AGG - chr4_4:39643521-39643540 None:intergenic 45.0%
! GAGGTCTTTGGGAAGACAAT+TGG + chr4_4:39643961-39643980 Msa0680550:CDS 45.0%
! AATTGGTAGCTTTCTGCCTG+AGG + chr4_4:39643978-39643997 Msa0680550:CDS 45.0%
! TCTGCCTGAGGAGTATAGAA+AGG + chr4_4:39643990-39644009 Msa0680550:CDS 45.0%
TGTTGGACACTGACATGTGT+CGG + chr4_4:39644515-39644534 Msa0680550:intron 45.0%
GTCCAGTTCATAAACAGAGG+TGG + chr4_4:39644687-39644706 Msa0680550:CDS 45.0%
GACCACCTCTGTTTATGAAC+TGG - chr4_4:39644692-39644711 None:intergenic 45.0%
GTGCAAAGCAAATGACAGAC+AGG + chr4_4:39644720-39644739 Msa0680550:CDS 45.0%
CCAGGAATGAAGTCCATTCT+TGG - chr4_4:39645063-39645082 None:intergenic 45.0%
! CCAAGAATGGACTTCATTCC+TGG + chr4_4:39645060-39645079 Msa0680550:CDS 45.0%
! AATGGACTTCATTCCTGGTG+TGG + chr4_4:39645065-39645084 Msa0680550:CDS 45.0%
CCACCATCAACAAGTTTGAG+CGG - chr4_4:39645257-39645276 None:intergenic 45.0%
ACTAGCCGAGCTGATGATAA+AGG + chr4_4:39645484-39645503 Msa0680550:CDS 45.0%
AAGGTATATGCAAAGGTGGC+TGG + chr4_4:39645592-39645611 Msa0680550:intron 45.0%
!! AGAGTTGATAGACTAGAGGG+AGG - chr4_4:39645622-39645641 None:intergenic 45.0%
TCCCTCTAGTCTATCAACTC+TGG + chr4_4:39645621-39645640 Msa0680550:CDS 45.0%
TGACAGAATACCAAGCTGCT+TGG - chr4_4:39645722-39645741 None:intergenic 45.0%
!! TGCAGAGTTGCTCAAGTTGA+AGG - chr4_4:39646027-39646046 None:intergenic 45.0%
!! ATTATTCAAATAAATAAAAA+TGG - chr4_4:39643638-39643657 None:intergenic 5.0%
!! ATTATTCAAATAAATAAAAA+TGG - chr4_4:39643638-39643657 None:intergenic 5.0%
!! ATTATTCAAATAAATAAAAA+TGG - chr4_4:39643638-39643657 None:intergenic 5.0%
CTTCATGGATCGAGTGAACC+TGG + chr4_4:39643337-39643356 Msa0680550:exon 50.0%
ATGGATCGAGTGAACCTGGA+TGG + chr4_4:39643341-39643360 Msa0680550:CDS 50.0%
!! GTGTGATTGGCTTTCCATCC+AGG - chr4_4:39643358-39643377 None:intergenic 50.0%
TCAATATGCATGATCGGCGG+TGG + chr4_4:39643383-39643402 Msa0680550:CDS 50.0%
GGATTATAACACGCGGCCTT+TGG + chr4_4:39643747-39643766 Msa0680550:CDS 50.0%
TTTCATTGATGCGATCCCGG+TGG + chr4_4:39643786-39643805 Msa0680550:CDS 50.0%
ATAGCTGAGCATGCGGAGAA+TGG + chr4_4:39644997-39645016 Msa0680550:intron 50.0%
GACTTCATTCCTGGTGTGGA+TGG + chr4_4:39645069-39645088 Msa0680550:CDS 50.0%
!! GAGCCGCTCAAACTTGTTGA+TGG + chr4_4:39645251-39645270 Msa0680550:CDS 50.0%
!! CCGCTCAAACTTGTTGATGG+TGG + chr4_4:39645254-39645273 Msa0680550:CDS 50.0%
AAGGCTATGATGACAGCGAC+AGG + chr4_4:39645671-39645690 Msa0680550:CDS 50.0%
CTTCATGGATCGAGTGAACC+TGG + chr4_4:39643337-39643356 Msa0680550:exon 50.0%
ATGGATCGAGTGAACCTGGA+TGG + chr4_4:39643341-39643360 Msa0680550:CDS 50.0%
!! GTGTGATTGGCTTTCCATCC+AGG - chr4_4:39643358-39643377 None:intergenic 50.0%
TCAATATGCATGATCGGCGG+TGG + chr4_4:39643383-39643402 Msa0680550:CDS 50.0%
GGATTATAACACGCGGCCTT+TGG + chr4_4:39643747-39643766 Msa0680550:CDS 50.0%
TTTCATTGATGCGATCCCGG+TGG + chr4_4:39643786-39643805 Msa0680550:CDS 50.0%
ATAGCTGAGCATGCGGAGAA+TGG + chr4_4:39644997-39645016 Msa0680550:intron 50.0%
GACTTCATTCCTGGTGTGGA+TGG + chr4_4:39645069-39645088 Msa0680550:CDS 50.0%
!! GAGCCGCTCAAACTTGTTGA+TGG + chr4_4:39645251-39645270 Msa0680550:CDS 50.0%
!! CCGCTCAAACTTGTTGATGG+TGG + chr4_4:39645254-39645273 Msa0680550:CDS 50.0%
AAGGCTATGATGACAGCGAC+AGG + chr4_4:39645671-39645690 Msa0680550:CDS 50.0%
CTTCATGGATCGAGTGAACC+TGG + chr4_4:39643337-39643356 Msa0680550:exon 50.0%
ATGGATCGAGTGAACCTGGA+TGG + chr4_4:39643341-39643360 Msa0680550:CDS 50.0%
!! GTGTGATTGGCTTTCCATCC+AGG - chr4_4:39643358-39643377 None:intergenic 50.0%
TCAATATGCATGATCGGCGG+TGG + chr4_4:39643383-39643402 Msa0680550:CDS 50.0%
GGATTATAACACGCGGCCTT+TGG + chr4_4:39643747-39643766 Msa0680550:CDS 50.0%
TTTCATTGATGCGATCCCGG+TGG + chr4_4:39643786-39643805 Msa0680550:CDS 50.0%
ATAGCTGAGCATGCGGAGAA+TGG + chr4_4:39644997-39645016 Msa0680550:intron 50.0%
GACTTCATTCCTGGTGTGGA+TGG + chr4_4:39645069-39645088 Msa0680550:CDS 50.0%
!! GAGCCGCTCAAACTTGTTGA+TGG + chr4_4:39645251-39645270 Msa0680550:CDS 50.0%
!! CCGCTCAAACTTGTTGATGG+TGG + chr4_4:39645254-39645273 Msa0680550:CDS 50.0%
AAGGCTATGATGACAGCGAC+AGG + chr4_4:39645671-39645690 Msa0680550:CDS 50.0%
ATATGCATGATCGGCGGTGG+AGG + chr4_4:39643386-39643405 Msa0680550:CDS 55.0%
ATCGGCGGTGGAGGATTCAT+CGG + chr4_4:39643395-39643414 Msa0680550:CDS 55.0%
! CGGACATCAGCTTTTCGGTG+AGG - chr4_4:39643427-39643446 None:intergenic 55.0%
!! CGCCAGCGGATTATAACACG+CGG + chr4_4:39643740-39643759 Msa0680550:CDS 55.0%
TCACTTGGACCATCCACACC+AGG - chr4_4:39645081-39645100 None:intergenic 55.0%
GGTGTGGATGGTCCAAGTGA+TGG + chr4_4:39645081-39645100 Msa0680550:CDS 55.0%
! ACTCTGGGGACACCATCACT+TGG - chr4_4:39645096-39645115 None:intergenic 55.0%
TTGCTCCAGAATCTCCTGCG+CGG + chr4_4:39645227-39645246 Msa0680550:intron 55.0%
ATATGCATGATCGGCGGTGG+AGG + chr4_4:39643386-39643405 Msa0680550:CDS 55.0%
ATCGGCGGTGGAGGATTCAT+CGG + chr4_4:39643395-39643414 Msa0680550:CDS 55.0%
! CGGACATCAGCTTTTCGGTG+AGG - chr4_4:39643427-39643446 None:intergenic 55.0%
!! CGCCAGCGGATTATAACACG+CGG + chr4_4:39643740-39643759 Msa0680550:CDS 55.0%
TCACTTGGACCATCCACACC+AGG - chr4_4:39645081-39645100 None:intergenic 55.0%
GGTGTGGATGGTCCAAGTGA+TGG + chr4_4:39645081-39645100 Msa0680550:CDS 55.0%
! ACTCTGGGGACACCATCACT+TGG - chr4_4:39645096-39645115 None:intergenic 55.0%
TTGCTCCAGAATCTCCTGCG+CGG + chr4_4:39645227-39645246 Msa0680550:intron 55.0%
ATATGCATGATCGGCGGTGG+AGG + chr4_4:39643386-39643405 Msa0680550:CDS 55.0%
ATCGGCGGTGGAGGATTCAT+CGG + chr4_4:39643395-39643414 Msa0680550:CDS 55.0%
! CGGACATCAGCTTTTCGGTG+AGG - chr4_4:39643427-39643446 None:intergenic 55.0%
!! CGCCAGCGGATTATAACACG+CGG + chr4_4:39643740-39643759 Msa0680550:CDS 55.0%
TCACTTGGACCATCCACACC+AGG - chr4_4:39645081-39645100 None:intergenic 55.0%
GGTGTGGATGGTCCAAGTGA+TGG + chr4_4:39645081-39645100 Msa0680550:CDS 55.0%
! ACTCTGGGGACACCATCACT+TGG - chr4_4:39645096-39645115 None:intergenic 55.0%
TTGCTCCAGAATCTCCTGCG+CGG + chr4_4:39645227-39645246 Msa0680550:intron 55.0%
TGCTGCGATTTGCACGCCAG+CGG + chr4_4:39643726-39643745 Msa0680550:CDS 60.0%
GGCCGCGTGTTATAATCCGC+TGG - chr4_4:39643745-39643764 None:intergenic 60.0%
TGCTGCGATTTGCACGCCAG+CGG + chr4_4:39643726-39643745 Msa0680550:CDS 60.0%
GGCCGCGTGTTATAATCCGC+TGG - chr4_4:39643745-39643764 None:intergenic 60.0%
TGCTGCGATTTGCACGCCAG+CGG + chr4_4:39643726-39643745 Msa0680550:CDS 60.0%
GGCCGCGTGTTATAATCCGC+TGG - chr4_4:39643745-39643764 None:intergenic 60.0%
GCTCGCCGCGCAGGAGATTC+TGG - chr4_4:39645235-39645254 None:intergenic 70.0%
GCTCGCCGCGCAGGAGATTC+TGG - chr4_4:39645235-39645254 None:intergenic 70.0%
GCTCGCCGCGCAGGAGATTC+TGG - chr4_4:39645235-39645254 None:intergenic 70.0%
GTTTGAGCGGCTCGCCGCGC+AGG - chr4_4:39645244-39645263 None:intergenic 75.0%
GTTTGAGCGGCTCGCCGCGC+AGG - chr4_4:39645244-39645263 None:intergenic 75.0%
GTTTGAGCGGCTCGCCGCGC+AGG - chr4_4:39645244-39645263 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 39643211 39646257 39643211 ID=Msa0680550;Name=Msa0680550
chr4_4 mRNA 39643211 39646257 39643211 ID=Msa0680550-mRNA-1;Parent=Msa0680550;Name=Msa0680550-mRNA-1;_AED=0.10;_eAED=0.10;_QI=130|1|1|1|1|1|9|222|381
chr4_4 exon 39643211 39643601 39643211 ID=Msa0680550-mRNA-1:exon:9371;Parent=Msa0680550-mRNA-1
chr4_4 exon 39643715 39643807 39643715 ID=Msa0680550-mRNA-1:exon:9372;Parent=Msa0680550-mRNA-1
chr4_4 exon 39643910 39644011 39643910 ID=Msa0680550-mRNA-1:exon:9373;Parent=Msa0680550-mRNA-1
chr4_4 exon 39644638 39644752 39644638 ID=Msa0680550-mRNA-1:exon:9374;Parent=Msa0680550-mRNA-1
chr4_4 exon 39645001 39645134 39645001 ID=Msa0680550-mRNA-1:exon:9375;Parent=Msa0680550-mRNA-1
chr4_4 exon 39645236 39645337 39645236 ID=Msa0680550-mRNA-1:exon:9376;Parent=Msa0680550-mRNA-1
chr4_4 exon 39645413 39645505 39645413 ID=Msa0680550-mRNA-1:exon:9377;Parent=Msa0680550-mRNA-1
chr4_4 exon 39645595 39645730 39645595 ID=Msa0680550-mRNA-1:exon:9378;Parent=Msa0680550-mRNA-1
chr4_4 exon 39645926 39646257 39645926 ID=Msa0680550-mRNA-1:exon:9379;Parent=Msa0680550-mRNA-1
chr4_4 five_prime_UTR 39643211 39643340 39643211 ID=Msa0680550-mRNA-1:five_prime_utr;Parent=Msa0680550-mRNA-1
chr4_4 CDS 39643341 39643601 39643341 ID=Msa0680550-mRNA-1:cds;Parent=Msa0680550-mRNA-1
chr4_4 CDS 39643715 39643807 39643715 ID=Msa0680550-mRNA-1:cds;Parent=Msa0680550-mRNA-1
chr4_4 CDS 39643910 39644011 39643910 ID=Msa0680550-mRNA-1:cds;Parent=Msa0680550-mRNA-1
chr4_4 CDS 39644638 39644752 39644638 ID=Msa0680550-mRNA-1:cds;Parent=Msa0680550-mRNA-1
chr4_4 CDS 39645001 39645134 39645001 ID=Msa0680550-mRNA-1:cds;Parent=Msa0680550-mRNA-1
chr4_4 CDS 39645236 39645337 39645236 ID=Msa0680550-mRNA-1:cds;Parent=Msa0680550-mRNA-1
chr4_4 CDS 39645413 39645505 39645413 ID=Msa0680550-mRNA-1:cds;Parent=Msa0680550-mRNA-1
chr4_4 CDS 39645595 39645730 39645595 ID=Msa0680550-mRNA-1:cds;Parent=Msa0680550-mRNA-1
chr4_4 CDS 39645926 39646035 39645926 ID=Msa0680550-mRNA-1:cds;Parent=Msa0680550-mRNA-1
chr4_4 three_prime_UTR 39646036 39646257 39646036 ID=Msa0680550-mRNA-1:three_prime_utr;Parent=Msa0680550-mRNA-1
Gene Sequence

>Msa0680550

ATGGATCGAGTGAACCTGGATGGAAAGCCAATCACACCGATCTCAATATGCATGATCGGCGGTGGAGGATTCATCGGATCACACCTCACCGAAAAGCTGATGTCCGAAACATCTCACAAAGCCATAGTCATTGATGTCTCCTCTGAGAAAATCAATCATCTCCTTGATAAGTCTCATCCTTGGGCTAACCGTATTGAGTTTCATCAAATGAATATCAAGAACGATTCTCGCCTTGAAACTCTTGTCAAAGCTTCTGATCTCACTATTAATCTTGCTGCGATTTGCACGCCAGCGGATTATAACACGCGGCCTTTGGATACTATTTACAGTAATTTCATTGATGCGATCCCGGTGATTAAATTTTGCACTGAGAATAACAAGCGTTTGATTCACTTTTCTACGTGTGAGGTCTTTGGGAAGACAATTGGTAGCTTTCTGCCTGAGGAGTATAGAAAGGAACCTCAATATTACAAGCTCAAAGAAGATGTGAGTCCTTGTATTTTTGGTCCAGTTCATAAACAGAGGTGGTCTTATGCATGTGCAAAGCAAATGACAGACAGGCTCATTTATGCTGAGCATGCGGAGAATGGACTCAAGTTCACTATTGTGAGACCTTATAACTGGATTGGACCAAGAATGGACTTCATTCCTGGTGTGGATGGTCCAAGTGATGGTGTCCCCAGAGTTTTAGCTTGTTTCAGTAATAATCTCCTGCGCGGCGAGCCGCTCAAACTTGTTGATGGTGGACATTCCCAGAGAACCTTTCTCTATATTAAAGATGCAATTGAGGCTGTTTTGTTAATGATTGATAACCCTGATAGAGCAAATGGACACATCTTTAATGTGGGAAACCCAGATAATGAAGTATCTGTTAAGCAACTAGCCGAGCTGATGATAAAGGTATATGCAAAGGTGGCTGGTGTACCTCCCTCTAGTCTATCAACTCTGGATGTGAGTTCAGAAGTTTTCTATGGTAAAGGCTATGATGACAGCGACAGGCGTATCCCTGACATGACAATTATCACCAAGCAGCTTGGTTGGAAGCCAAAGACATCTCTTGATGAACTGTTGGATTCTACCCTTCAATATCAACATCAGACATATTCTCATGCTATCAAGAAAGAACTCTCAAAACCTTCAACTTGA

Protein sequence

>Msa0680550

MDRVNLDGKPITPISICMIGGGGFIGSHLTEKLMSETSHKAIVIDVSSEKINHLLDKSHPWANRIEFHQMNIKNDSRLETLVKASDLTINLAAICTPADYNTRPLDTIYSNFIDAIPVIKFCTENNKRLIHFSTCEVFGKTIGSFLPEEYRKEPQYYKLKEDVSPCIFGPVHKQRWSYACAKQMTDRLIYAEHAENGLKFTIVRPYNWIGPRMDFIPGVDGPSDGVPRVLACFSNNLLRGEPLKLVDGGHSQRTFLYIKDAIEAVLLMIDNPDRANGHIFNVGNPDNEVSVKQLAELMIKVYAKVAGVPPSSLSTLDVSSEVFYGKGYDDSDRRIPDMTIITKQLGWKPKTSLDELLDSTLQYQHQTYSHAIKKELSKPST*