Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0163040 | KEH28177.1 | 96.098 | 205 | 8 | 0 | 18 | 222 | 61 | 265 | 2.18e-141 | 407 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0163040 | sp|Q8RX37|P2C02_ARATH | 59.330 | 209 | 78 | 4 | 18 | 221 | 59 | 265 | 3.28e-77 | 239 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0163040 | A0A072UER2 | 96.098 | 205 | 8 | 0 | 18 | 222 | 61 | 265 | 1.04e-141 | 407 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0020390 | Msa0163040 | 0.818557 | 1.841649e-52 | -8.615850e-47 |
| Msa0035120 | Msa0163040 | 0.804404 | 2.195928e-49 | -8.615850e-47 |
| Msa0035130 | Msa0163040 | 0.801860 | 7.377963e-49 | -8.615850e-47 |
| Msa0036130 | Msa0163040 | 0.809600 | 1.746530e-50 | -8.615850e-47 |
| Msa0046560 | Msa0163040 | 0.816377 | 5.706760e-52 | -8.615850e-47 |
| Msa0051020 | Msa0163040 | 0.804453 | 2.144417e-49 | -8.615850e-47 |
| Msa0051740 | Msa0163040 | 0.804092 | 2.550444e-49 | -8.615850e-47 |
| Msa0065950 | Msa0163040 | 0.815211 | 1.038578e-51 | -8.615850e-47 |
| Msa0090550 | Msa0163040 | 0.809185 | 2.143757e-50 | -8.615850e-47 |
| Msa0090570 | Msa0163040 | 0.824277 | 8.808660e-54 | -8.615850e-47 |
| Msa0103790 | Msa0163040 | 0.805886 | 1.074732e-49 | -8.615850e-47 |
| Msa0106620 | Msa0163040 | 0.802099 | 6.588430e-49 | -8.615850e-47 |
| Msa0106710 | Msa0163040 | 0.821225 | 4.521498e-53 | -8.615850e-47 |
| Msa0130720 | Msa0163040 | 0.815521 | 8.857955e-52 | -8.615850e-47 |
| Msa0139670 | Msa0163040 | 0.834612 | 2.710413e-56 | -8.615850e-47 |
| Msa0142500 | Msa0163040 | 0.800973 | 1.120848e-48 | -8.615850e-47 |
| Msa0150260 | Msa0163040 | 0.801025 | 1.093907e-48 | -8.615850e-47 |
| Msa0160960 | Msa0163040 | 0.801436 | 9.013970e-49 | -8.615850e-47 |
| Msa0163040 | Msa0167980 | 0.806584 | 7.661370e-50 | -8.615850e-47 |
| Msa0163040 | Msa0171980 | 0.806599 | 7.607880e-50 | -8.615850e-47 |
| Msa0163040 | Msa0173800 | 0.807080 | 6.020017e-50 | -8.615850e-47 |
| Msa0163040 | Msa0183850 | 0.830725 | 2.497653e-55 | -8.615850e-47 |
| Msa0163040 | Msa0183870 | 0.817186 | 3.756930e-52 | -8.615850e-47 |
| Msa0163040 | Msa0187830 | 0.817441 | 3.293175e-52 | -8.615850e-47 |
| Msa0163040 | Msa0188350 | 0.811942 | 5.440139e-51 | -8.615850e-47 |
| Msa0163040 | Msa0192640 | 0.814617 | 1.406474e-51 | -8.615850e-47 |
| Msa0163040 | Msa0202410 | 0.807575 | 4.726993e-50 | -8.615850e-47 |
| Msa0163040 | Msa0204960 | 0.814312 | 1.643032e-51 | -8.615850e-47 |
| Msa0163040 | Msa0207350 | 0.805266 | 1.450319e-49 | -8.615850e-47 |
| Msa0163040 | Msa0220730 | 0.827375 | 1.619976e-54 | -8.615850e-47 |
| Msa0163040 | Msa0233380 | 0.804687 | 1.916231e-49 | -8.615850e-47 |
| Msa0163040 | Msa0240270 | 0.805089 | 1.579395e-49 | -8.615850e-47 |
| Msa0163040 | Msa0240900 | 0.809465 | 1.867074e-50 | -8.615850e-47 |
| Msa0163040 | Msa0241830 | 0.802333 | 5.897114e-49 | -8.615850e-47 |
| Msa0163040 | Msa0243090 | 0.801576 | 8.436484e-49 | -8.615850e-47 |
| Msa0163040 | Msa0249550 | 0.805077 | 1.588589e-49 | -8.615850e-47 |
| Msa0163040 | Msa0249580 | 0.813446 | 2.549853e-51 | -8.615850e-47 |
| Msa0163040 | Msa0257490 | 0.840211 | 9.965654e-58 | -8.615850e-47 |
| Msa0163040 | Msa0259210 | 0.810366 | 1.194728e-50 | -8.615850e-47 |
| Msa0163040 | Msa0281530 | 0.828260 | 9.923690e-55 | -8.615850e-47 |
| Msa0163040 | Msa0283420 | 0.804481 | 2.116182e-49 | -8.615850e-47 |
| Msa0163040 | Msa0288080 | 0.811216 | 7.822564e-51 | -8.615850e-47 |
| Msa0163040 | Msa0296790 | 0.835795 | 1.363087e-56 | -8.615850e-47 |
| Msa0163040 | Msa0296820 | 0.811626 | 6.373922e-51 | -8.615850e-47 |
| Msa0163040 | Msa0303520 | 0.800801 | 1.215134e-48 | -8.615850e-47 |
| Msa0163040 | Msa0312910 | 0.801976 | 6.983320e-49 | -8.615850e-47 |
| Msa0163040 | Msa0317970 | 0.840275 | 9.591907e-58 | -8.615850e-47 |
| Msa0163040 | Msa0320590 | 0.806683 | 7.301576e-50 | -8.615850e-47 |
| Msa0163040 | Msa0322900 | 0.833210 | 6.080049e-56 | -8.615850e-47 |
| Msa0163040 | Msa0326480 | 0.803512 | 3.365530e-49 | -8.615850e-47 |
| Msa0163040 | Msa0336320 | 0.815188 | 1.050451e-51 | -8.615850e-47 |
| Msa0163040 | Msa0343850 | 0.802760 | 4.814055e-49 | -8.615850e-47 |
| Msa0163040 | Msa0347750 | 0.823857 | 1.104960e-53 | -8.615850e-47 |
| Msa0163040 | Msa0382370 | 0.855610 | 5.620407e-62 | -8.615850e-47 |
| Msa0163040 | Msa0385500 | 0.807892 | 4.048869e-50 | -8.615850e-47 |
| Msa0163040 | Msa0389210 | 0.819420 | 1.172287e-52 | -8.615850e-47 |
| Msa0163040 | Msa0390530 | 0.829749 | 4.325330e-55 | -8.615850e-47 |
| Msa0163040 | Msa0395980 | 0.802956 | 4.386105e-49 | -8.615850e-47 |
| Msa0163040 | Msa0398200 | 0.809519 | 1.817542e-50 | -8.615850e-47 |
| Msa0163040 | Msa0403770 | 0.818607 | 1.794609e-52 | -8.615850e-47 |
| Msa0163040 | Msa0432160 | 0.850006 | 2.244091e-60 | -8.615850e-47 |
| Msa0163040 | Msa0443430 | 0.809650 | 1.703459e-50 | -8.615850e-47 |
| Msa0163040 | Msa0450400 | -0.829686 | 4.480158e-55 | -8.615850e-47 |
| Msa0163040 | Msa0469620 | -0.828107 | 1.080107e-54 | -8.615850e-47 |
| Msa0163040 | Msa0473330 | 0.801983 | 6.960916e-49 | -8.615850e-47 |
| Msa0163040 | Msa0476680 | 0.852629 | 4.071871e-61 | -8.615850e-47 |
| Msa0163040 | Msa0481970 | 0.842058 | 3.260158e-58 | -8.615850e-47 |
| Msa0163040 | Msa0482940 | 0.819344 | 1.220001e-52 | -8.615850e-47 |
| Msa0163040 | Msa0485240 | 0.837704 | 4.443516e-57 | -8.615850e-47 |
| Msa0163040 | Msa0491000 | 0.814125 | 1.806719e-51 | -8.615850e-47 |
| Msa0163040 | Msa0510840 | 0.803875 | 2.829489e-49 | -8.615850e-47 |
| Msa0163040 | Msa0510930 | 0.801670 | 8.069078e-49 | -8.615850e-47 |
| Msa0163040 | Msa0517090 | 0.806758 | 7.041679e-50 | -8.615850e-47 |
| Msa0163040 | Msa0518170 | 0.823010 | 1.743510e-53 | -8.615850e-47 |
| Msa0163040 | Msa0520270 | 0.802321 | 5.930187e-49 | -8.615850e-47 |
| Msa0163040 | Msa0521010 | 0.850990 | 1.187361e-60 | -8.615850e-47 |
| Msa0163040 | Msa0521670 | 0.805278 | 1.442234e-49 | -8.615850e-47 |
| Msa0163040 | Msa0521740 | 0.802108 | 6.559870e-49 | -8.615850e-47 |
| Msa0163040 | Msa0531250 | 0.800052 | 1.727143e-48 | -8.615850e-47 |
| Msa0163040 | Msa0534050 | 0.813588 | 2.372539e-51 | -8.615850e-47 |
| Msa0163040 | Msa0542290 | 0.817297 | 3.547109e-52 | -8.615850e-47 |
| Msa0163040 | Msa0547160 | 0.830109 | 3.534277e-55 | -8.615850e-47 |
| Msa0163040 | Msa0547990 | 0.813987 | 1.938189e-51 | -8.615850e-47 |
| Msa0163040 | Msa0585070 | 0.811846 | 5.706354e-51 | -8.615850e-47 |
| Msa0163040 | Msa0600450 | 0.821978 | 3.027802e-53 | -8.615850e-47 |
| Msa0163040 | Msa0601530 | 0.810677 | 1.023485e-50 | -8.615850e-47 |
| Msa0163040 | Msa0604290 | 0.803236 | 3.837688e-49 | -8.615850e-47 |
| Msa0163040 | Msa0638350 | 0.811554 | 6.605930e-51 | -8.615850e-47 |
| Msa0163040 | Msa0638360 | 0.807803 | 4.229436e-50 | -8.615850e-47 |
| Msa0163040 | Msa0640940 | 0.830969 | 2.176515e-55 | -8.615850e-47 |
| Msa0163040 | Msa0641730 | 0.808784 | 2.612691e-50 | -8.615850e-47 |
| Msa0163040 | Msa0642970 | 0.814036 | 1.889780e-51 | -8.615850e-47 |
| Msa0163040 | Msa0644800 | 0.818904 | 1.536551e-52 | -8.615850e-47 |
| Msa0163040 | Msa0663270 | 0.806382 | 8.450721e-50 | -8.615850e-47 |
| Msa0163040 | Msa0672480 | 0.808929 | 2.432869e-50 | -8.615850e-47 |
| Msa0163040 | Msa0679360 | 0.831211 | 1.898361e-55 | -8.615850e-47 |
| Msa0163040 | Msa0682680 | 0.849282 | 3.574074e-60 | -8.615850e-47 |
| Msa0163040 | Msa0683070 | 0.806379 | 8.462837e-50 | -8.615850e-47 |
| Msa0163040 | Msa0689780 | 0.815540 | 8.773155e-52 | -8.615850e-47 |
| Msa0163040 | Msa0696850 | 0.802137 | 6.470903e-49 | -8.615850e-47 |
| Msa0163040 | Msa0705190 | 0.801206 | 1.004225e-48 | -8.615850e-47 |
| Msa0163040 | Msa0705990 | 0.800927 | 1.145269e-48 | -8.615850e-47 |
| Msa0163040 | Msa0709120 | 0.832597 | 8.633470e-56 | -8.615850e-47 |
| Msa0163040 | Msa0721280 | 0.801360 | 9.342286e-49 | -8.615850e-47 |
| Msa0163040 | Msa0743530 | 0.804460 | 2.137592e-49 | -8.615850e-47 |
| Msa0163040 | Msa0746170 | 0.817718 | 2.851893e-52 | -8.615850e-47 |
| Msa0163040 | Msa0746210 | 0.816385 | 5.683389e-52 | -8.615850e-47 |
| Msa0163040 | Msa0756380 | 0.819102 | 1.385381e-52 | -8.615850e-47 |
| Msa0163040 | Msa0779260 | 0.801097 | 1.057452e-48 | -8.615850e-47 |
| Msa0163040 | Msa0784480 | 0.800867 | 1.178326e-48 | -8.615850e-47 |
| Msa0163040 | Msa0789560 | 0.809750 | 1.621190e-50 | -8.615850e-47 |
| Msa0163040 | Msa0800370 | 0.810899 | 9.160837e-51 | -8.615850e-47 |
| Msa0163040 | Msa0811040 | 0.801751 | 7.766142e-49 | -8.615850e-47 |
| Msa0163040 | Msa0813260 | 0.803296 | 3.730292e-49 | -8.615850e-47 |
| Msa0163040 | Msa0822500 | 0.804095 | 2.546444e-49 | -8.615850e-47 |
| Msa0163040 | Msa0826150 | 0.827881 | 1.224721e-54 | -8.615850e-47 |
| Msa0163040 | Msa0831130 | 0.801278 | 9.708055e-49 | -8.615850e-47 |
| Msa0163040 | Msa0832340 | 0.806922 | 6.502341e-50 | -8.615850e-47 |
| Msa0163040 | Msa0844110 | 0.823909 | 1.074508e-53 | -8.615850e-47 |
| Msa0163040 | Msa0857300 | 0.805860 | 1.088797e-49 | -8.615850e-47 |
| Msa0163040 | Msa0866410 | 0.802904 | 4.495476e-49 | -8.615850e-47 |
| Msa0163040 | Msa0867870 | 0.808204 | 3.473807e-50 | -8.615850e-47 |
| Msa0163040 | Msa0880810 | 0.804121 | 2.514239e-49 | -8.615850e-47 |
| Msa0163040 | Msa0888990 | 0.804226 | 2.391459e-49 | -8.615850e-47 |
| Msa0163040 | Msa0890550 | 0.810298 | 1.235834e-50 | -8.615850e-47 |
| Msa0163040 | Msa0892640 | 0.802707 | 4.937468e-49 | -8.615850e-47 |
| Msa0163040 | Msa0894710 | 0.809551 | 1.789450e-50 | -8.615850e-47 |
| Msa0163040 | Msa0903780 | 0.840425 | 8.765700e-58 | -8.615850e-47 |
| Msa0163040 | Msa0905750 | 0.817982 | 2.485682e-52 | -8.615850e-47 |
| Msa0163040 | Msa0905990 | 0.806245 | 9.035004e-50 | -8.615850e-47 |
| Msa0163040 | Msa0918390 | 0.805939 | 1.047610e-49 | -8.615850e-47 |
| Msa0163040 | Msa0921420 | 0.807211 | 5.645756e-50 | -8.615850e-47 |
| Msa0163040 | Msa0934140 | 0.823667 | 1.224252e-53 | -8.615850e-47 |
| Msa0163040 | Msa0936390 | 0.800051 | 1.727673e-48 | -8.615850e-47 |
| Msa0163040 | Msa0944200 | 0.806608 | 7.574033e-50 | -8.615850e-47 |
| Msa0163040 | Msa0944610 | 0.839471 | 1.553990e-57 | -8.615850e-47 |
| Msa0163040 | Msa0960390 | 0.808186 | 3.504098e-50 | -8.615850e-47 |
| Msa0163040 | Msa0970990 | 0.808274 | 3.356639e-50 | -8.615850e-47 |
| Msa0163040 | Msa0974950 | 0.822530 | 2.254724e-53 | -8.615850e-47 |
| Msa0163040 | Msa0992600 | 0.807191 | 5.701778e-50 | -8.615850e-47 |
| Msa0163040 | Msa0994370 | 0.815679 | 8.168877e-52 | -8.615850e-47 |
| Msa0163040 | Msa1011090 | 0.809314 | 2.011407e-50 | -8.615850e-47 |
| Msa0163040 | Msa1034270 | 0.804588 | 2.010028e-49 | -8.615850e-47 |
| Msa0163040 | Msa1034500 | 0.806721 | 7.167860e-50 | -8.615850e-47 |
| Msa0163040 | Msa1037520 | 0.827849 | 1.246239e-54 | -8.615850e-47 |
| Msa0163040 | Msa1040980 | 0.802947 | 4.404083e-49 | -8.615850e-47 |
| Msa0163040 | Msa1042660 | 0.837121 | 6.265508e-57 | -8.615850e-47 |
| Msa0163040 | Msa1048160 | 0.810061 | 1.389732e-50 | -8.615850e-47 |
| Msa0163040 | Msa1063420 | 0.810814 | 9.561251e-51 | -8.615850e-47 |
| Msa0163040 | Msa1068870 | 0.808141 | 3.583734e-50 | -8.615850e-47 |
| Msa0163040 | Msa1072900 | 0.830972 | 2.172490e-55 | -8.615850e-47 |
| Msa0163040 | Msa1089450 | 0.833574 | 4.932427e-56 | -8.615850e-47 |
| Msa0163040 | Msa1093100 | 0.807521 | 4.852773e-50 | -8.615850e-47 |
| Msa0163040 | Msa1127430 | 0.819570 | 1.083444e-52 | -8.615850e-47 |
| Msa0163040 | Msa1127590 | 0.810224 | 1.282053e-50 | -8.615850e-47 |
| Msa0163040 | Msa1131490 | 0.842881 | 1.972155e-58 | -8.615850e-47 |
| Msa0163040 | Msa1142670 | 0.803670 | 3.121018e-49 | -8.615850e-47 |
| Msa0163040 | Msa1150180 | 0.817730 | 2.833806e-52 | -8.615850e-47 |
| Msa0163040 | Msa1168590 | 0.801979 | 6.973246e-49 | -8.615850e-47 |
| Msa0163040 | Msa1173300 | 0.811007 | 8.681110e-51 | -8.615850e-47 |
| Msa0163040 | Msa1177780 | 0.811755 | 5.972889e-51 | -8.615850e-47 |
| Msa0163040 | Msa1178580 | 0.810572 | 1.078448e-50 | -8.615850e-47 |
| Msa0163040 | Msa1204100 | -0.801797 | 7.600701e-49 | -8.615850e-47 |
| Msa0163040 | Msa1204830 | 0.808761 | 2.642782e-50 | -8.615850e-47 |
| Msa0163040 | Msa1205590 | 0.809434 | 1.896325e-50 | -8.615850e-47 |
| Msa0163040 | Msa1206650 | 0.825522 | 4.478451e-54 | -8.615850e-47 |
| Msa0163040 | Msa1214320 | 0.812728 | 3.662835e-51 | -8.615850e-47 |
| Msa0163040 | Msa1218580 | 0.802245 | 6.148641e-49 | -8.615850e-47 |
| Msa0163040 | Msa1225100 | 0.820029 | 8.509358e-53 | -8.615850e-47 |
| Msa0163040 | Msa1232740 | 0.809865 | 1.531581e-50 | -8.615850e-47 |
| Msa0163040 | Msa1233850 | 0.803273 | 3.771140e-49 | -8.615850e-47 |
| Msa0163040 | Msa1242660 | 0.801604 | 8.323537e-49 | -8.615850e-47 |
| Msa0163040 | Msa1256270 | -0.800592 | 1.340512e-48 | -8.615850e-47 |
| Msa0163040 | Msa1264420 | 0.813333 | 2.698950e-51 | -8.615850e-47 |
| Msa0163040 | Msa1265590 | 0.812906 | 3.349101e-51 | -8.615850e-47 |
| Msa0163040 | Msa1270660 | 0.832791 | 7.726290e-56 | -8.615850e-47 |
| Msa0163040 | Msa1271130 | 0.829027 | 6.476873e-55 | -8.615850e-47 |
| Msa0163040 | Msa1275110 | 0.807153 | 5.808473e-50 | -8.615850e-47 |
| Msa0163040 | Msa1276150 | 0.809640 | 1.712319e-50 | -8.615850e-47 |
| Msa0163040 | Msa1286800 | 0.826387 | 2.790119e-54 | -8.615850e-47 |
| Msa0163040 | Msa1287190 | 0.810080 | 1.377160e-50 | -8.615850e-47 |
| Msa0163040 | Msa1296460 | -0.800689 | 1.280829e-48 | -8.615850e-47 |
| Msa0163040 | Msa1297530 | 0.825939 | 3.565422e-54 | -8.615850e-47 |
| Msa0163040 | Msa1303580 | 0.803938 | 2.745590e-49 | -8.615850e-47 |
| Msa0163040 | Msa1305810 | 0.805207 | 1.492301e-49 | -8.615850e-47 |
| Msa0163040 | Msa1307180 | 0.817311 | 3.521093e-52 | -8.615850e-47 |
| Msa0163040 | Msa1307600 | 0.812595 | 3.916826e-51 | -8.615850e-47 |
| Msa0163040 | Msa1313320 | 0.811278 | 7.585572e-51 | -8.615850e-47 |
| Msa0163040 | Msa1316360 | 0.805670 | 1.193614e-49 | -8.615850e-47 |
| Msa0163040 | Msa1323690 | 0.826910 | 2.092759e-54 | -8.615850e-47 |
| Msa0163040 | Msa1329050 | -0.806065 | 9.855462e-50 | -8.615850e-47 |
| Msa0163040 | Msa1329870 | 0.819794 | 9.633900e-53 | -8.615850e-47 |
| Msa0163040 | Msa1330180 | 0.801370 | 9.297642e-49 | -8.615850e-47 |
| Msa0163040 | Msa1330630 | 0.800905 | 1.157377e-48 | -8.615850e-47 |
| Msa0163040 | Msa1332050 | 0.810168 | 1.317830e-50 | -8.615850e-47 |
| Msa0163040 | Msa1336040 | 0.820692 | 5.996646e-53 | -8.615850e-47 |
| Msa0163040 | Msa1336560 | 0.808579 | 2.889635e-50 | -8.615850e-47 |
| Msa0163040 | Msa1357890 | 0.801682 | 8.023969e-49 | -8.615850e-47 |
| Msa0163040 | Msa1369690 | 0.810733 | 9.952940e-51 | -8.615850e-47 |
| Msa0163040 | Msa1370590 | 0.815452 | 9.176495e-52 | -8.615850e-47 |
| Msa0163040 | Msa1381650 | 0.809561 | 1.780238e-50 | -8.615850e-47 |
| Msa0163040 | Msa1384100 | 0.817380 | 3.397740e-52 | -8.615850e-47 |
| Msa0163040 | Msa1390700 | 0.813184 | 2.910819e-51 | -8.615850e-47 |
| Msa0163040 | Msa1392160 | -0.804799 | 1.815981e-49 | -8.615850e-47 |
| Msa0163040 | Msa1392910 | 0.811669 | 6.235697e-51 | -8.615850e-47 |
| Msa0163040 | Msa1398090 | 0.801214 | 1.000885e-48 | -8.615850e-47 |
| Msa0163040 | Msa1405220 | 0.822394 | 2.425813e-53 | -8.615850e-47 |
| Msa0163040 | Msa1407190 | 0.807955 | 3.925527e-50 | -8.615850e-47 |
| Msa0163040 | Msa1416370 | 0.807708 | 4.428917e-50 | -8.615850e-47 |
| Msa0163040 | Msa1418240 | 0.835287 | 1.832246e-56 | -8.615850e-47 |
| Msa0163040 | Msa1420270 | 0.810666 | 1.029224e-50 | -8.615850e-47 |
| Msa0163040 | Msa1422810 | 0.814824 | 1.265485e-51 | -8.615850e-47 |
| Msa0163040 | Msa1424350 | 0.800079 | 1.704862e-48 | -8.615850e-47 |
| Msa0163040 | Msa1428780 | 0.809262 | 2.063891e-50 | -8.615850e-47 |
| Msa0163040 | Msa1432130 | 0.805913 | 1.060846e-49 | -8.615850e-47 |
| Msa0163040 | Msa1444120 | 0.828000 | 1.146417e-54 | -8.615850e-47 |
| Msa0163040 | Msa1446080 | 0.811269 | 7.617885e-51 | -8.615850e-47 |
| Msa0163040 | Msa1447180 | 0.815683 | 8.153005e-52 | -8.615850e-47 |
| Msa0163040 | Msa1453360 | 0.803428 | 3.502994e-49 | -8.615850e-47 |
| Msa0163040 | Msa1454450 | 0.842640 | 2.285269e-58 | -8.615850e-47 |
| Msa0163040 | Msa1454570 | 0.824363 | 8.405717e-54 | -8.615850e-47 |
| Msa0163040 | Msa1454960 | 0.824491 | 7.841943e-54 | -8.615850e-47 |
| Msa0163040 | Msa1456230 | 0.849859 | 2.466821e-60 | -8.615850e-47 |
| Msa0163040 | Msa1457160 | 0.806524 | 7.889252e-50 | -8.615850e-47 |
| Msa0163040 | Msa1458340 | 0.807575 | 4.727174e-50 | -8.615850e-47 |
| Msa0163040 | Msa1460320 | -0.847365 | 1.210902e-59 | -8.615850e-47 |
| Msa0163040 | Msa1461540 | 0.812335 | 4.463910e-51 | -8.615850e-47 |
| Msa0163040 | Msa1465570 | 0.809696 | 1.665358e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0163040 | MtrunA17_Chr5g0430481 | 96.098 | 205 | 8 | 0 | 18 | 222 | 61 | 265 | 8.50e-145 | 409 |
| Msa0163040 | MtrunA17_Chr3g0105371 | 69.780 | 182 | 53 | 2 | 42 | 221 | 47 | 228 | 5.77e-90 | 268 |
| Msa0163040 | MtrunA17_Chr3g0105351 | 66.138 | 189 | 62 | 2 | 35 | 221 | 16 | 204 | 1.16e-86 | 259 |
| Msa0163040 | MtrunA17_Chr4g0065141 | 39.355 | 155 | 73 | 4 | 84 | 222 | 89 | 238 | 1.78e-24 | 99.4 |
| Msa0163040 | MtrunA17_Chr1g0150451 | 39.416 | 137 | 77 | 2 | 88 | 220 | 85 | 219 | 3.42e-24 | 98.2 |
| Msa0163040 | MtrunA17_Chr1g0212961 | 36.957 | 138 | 78 | 3 | 87 | 220 | 102 | 234 | 1.78e-23 | 96.3 |
| Msa0163040 | MtrunA17_Chr3g0136711 | 37.226 | 137 | 80 | 2 | 88 | 220 | 42 | 176 | 6.22e-22 | 91.3 |
| Msa0163040 | MtrunA17_Chr3g0126511 | 35.862 | 145 | 85 | 3 | 80 | 220 | 96 | 236 | 2.74e-21 | 90.5 |
| Msa0163040 | MtrunA17_Chr3g0138281 | 38.667 | 150 | 71 | 4 | 88 | 221 | 90 | 234 | 1.15e-20 | 89.0 |
| Msa0163040 | MtrunA17_Chr8g0360351 | 40.909 | 132 | 70 | 4 | 93 | 218 | 48 | 177 | 6.37e-18 | 80.1 |
| Msa0163040 | MtrunA17_Chr5g0426141 | 37.410 | 139 | 78 | 7 | 81 | 213 | 35 | 170 | 2.10e-17 | 79.0 |
| Msa0163040 | MtrunA17_Chr2g0317021 | 37.143 | 140 | 81 | 4 | 80 | 215 | 87 | 223 | 3.87e-17 | 78.6 |
| Msa0163040 | MtrunA17_Chr1g0171571 | 31.373 | 153 | 87 | 3 | 80 | 219 | 389 | 536 | 4.43e-17 | 79.3 |
| Msa0163040 | MtrunA17_Chr5g0407161 | 33.108 | 148 | 86 | 4 | 86 | 222 | 91 | 236 | 8.56e-17 | 78.2 |
| Msa0163040 | MtrunA17_Chr2g0293811 | 33.582 | 134 | 78 | 2 | 100 | 222 | 89 | 222 | 1.96e-16 | 77.0 |
| Msa0163040 | MtrunA17_Chr1g0194191 | 32.278 | 158 | 88 | 4 | 84 | 222 | 83 | 240 | 2.98e-16 | 76.6 |
| Msa0163040 | MtrunA17_Chr3g0115851 | 32.558 | 172 | 106 | 7 | 56 | 221 | 9 | 176 | 5.74e-15 | 72.0 |
| Msa0163040 | MtrunA17_Chr4g0070871 | 34.677 | 124 | 66 | 3 | 111 | 220 | 253 | 375 | 1.46e-14 | 72.0 |
| Msa0163040 | MtrunA17_Chr7g0263281 | 32.812 | 128 | 69 | 4 | 110 | 221 | 70 | 196 | 1.79e-14 | 71.2 |
| Msa0163040 | MtrunA17_Chr4g0050381 | 37.302 | 126 | 71 | 6 | 93 | 213 | 43 | 165 | 1.99e-14 | 70.5 |
| Msa0163040 | MtrunA17_Chr4g0051661 | 37.879 | 132 | 75 | 5 | 93 | 221 | 165 | 292 | 2.33e-14 | 71.2 |
| Msa0163040 | MtrunA17_Chr3g0112291 | 29.139 | 151 | 89 | 2 | 88 | 220 | 100 | 250 | 4.14e-14 | 70.5 |
| Msa0163040 | MtrunA17_Chr3g0135961 | 31.852 | 135 | 71 | 4 | 106 | 220 | 281 | 414 | 4.85e-14 | 70.5 |
| Msa0163040 | MtrunA17_Chr5g0435721 | 32.215 | 149 | 83 | 3 | 88 | 219 | 200 | 347 | 5.76e-14 | 70.1 |
| Msa0163040 | MtrunA17_Chr1g0150781 | 32.576 | 132 | 64 | 3 | 111 | 220 | 290 | 418 | 1.45e-13 | 68.9 |
| Msa0163040 | MtrunA17_Chr7g0271971 | 34.513 | 113 | 66 | 3 | 105 | 209 | 60 | 172 | 1.95e-13 | 68.6 |
| Msa0163040 | MtrunA17_Chr8g0389921 | 37.190 | 121 | 67 | 3 | 109 | 220 | 196 | 316 | 3.51e-13 | 67.8 |
| Msa0163040 | MtrunA17_Chr3g0144111 | 34.513 | 113 | 54 | 2 | 110 | 222 | 26 | 118 | 5.73e-13 | 66.2 |
| Msa0163040 | MtrunA17_Chr2g0279151 | 34.043 | 141 | 79 | 7 | 82 | 213 | 34 | 169 | 1.58e-12 | 65.1 |
| Msa0163040 | MtrunA17_Chr3g0127091 | 32.609 | 138 | 76 | 5 | 87 | 210 | 67 | 201 | 1.68e-12 | 65.9 |
| Msa0163040 | MtrunA17_Chr2g0286951 | 33.813 | 139 | 75 | 6 | 94 | 220 | 70 | 203 | 3.39e-12 | 65.1 |
| Msa0163040 | MtrunA17_Chr3g0133801 | 32.800 | 125 | 75 | 5 | 105 | 221 | 60 | 183 | 1.69e-11 | 62.8 |
| Msa0163040 | MtrunA17_Chr1g0158781 | 38.849 | 139 | 77 | 4 | 89 | 220 | 122 | 259 | 2.35e-11 | 62.4 |
| Msa0163040 | MtrunA17_Chr6g0483411 | 25.625 | 160 | 93 | 4 | 87 | 220 | 51 | 210 | 3.36e-11 | 61.6 |
| Msa0163040 | MtrunA17_Chr1g0181901 | 35.052 | 97 | 52 | 3 | 111 | 197 | 76 | 171 | 3.53e-11 | 62.0 |
| Msa0163040 | MtrunA17_Chr3g0089711 | 32.653 | 147 | 76 | 7 | 93 | 222 | 53 | 193 | 6.67e-11 | 60.8 |
| Msa0163040 | MtrunA17_Chr7g0225501 | 29.293 | 198 | 113 | 9 | 31 | 209 | 7 | 196 | 7.54e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0163040 | AT1G07160.1 | 59.330 | 209 | 78 | 4 | 18 | 221 | 59 | 265 | 3.33e-78 | 239 |
| Msa0163040 | AT2G30020.1 | 57.399 | 223 | 78 | 5 | 16 | 221 | 60 | 282 | 9.79e-76 | 234 |
| Msa0163040 | AT2G40180.1 | 53.810 | 210 | 83 | 6 | 25 | 222 | 69 | 276 | 2.08e-59 | 192 |
| Msa0163040 | AT1G67820.2 | 45.213 | 188 | 91 | 4 | 43 | 221 | 42 | 226 | 3.41e-44 | 152 |
| Msa0163040 | AT1G67820.1 | 45.213 | 188 | 91 | 4 | 43 | 221 | 78 | 262 | 5.51e-44 | 153 |
| Msa0163040 | AT4G08260.1 | 46.341 | 123 | 44 | 3 | 93 | 214 | 1 | 102 | 6.17e-27 | 103 |
| Msa0163040 | AT1G43900.1 | 37.857 | 140 | 77 | 3 | 87 | 220 | 130 | 265 | 5.95e-24 | 98.2 |
| Msa0163040 | AT4G31750.2 | 39.416 | 137 | 77 | 2 | 88 | 220 | 41 | 175 | 6.29e-23 | 94.4 |
| Msa0163040 | AT4G31750.1 | 39.416 | 137 | 77 | 2 | 88 | 220 | 41 | 175 | 7.22e-23 | 94.4 |
| Msa0163040 | AT4G31750.3 | 39.416 | 137 | 77 | 2 | 88 | 220 | 41 | 175 | 7.22e-23 | 94.4 |
| Msa0163040 | AT3G27140.1 | 46.847 | 111 | 40 | 2 | 93 | 202 | 1 | 93 | 7.31e-23 | 93.2 |
| Msa0163040 | AT5G10740.1 | 37.500 | 144 | 84 | 2 | 81 | 220 | 34 | 175 | 7.69e-23 | 95.1 |
| Msa0163040 | AT5G10740.2 | 37.500 | 144 | 84 | 2 | 81 | 220 | 34 | 175 | 7.69e-23 | 95.1 |
| Msa0163040 | AT2G33700.1 | 37.162 | 148 | 80 | 3 | 86 | 222 | 90 | 235 | 1.37e-21 | 92.0 |
| Msa0163040 | AT5G24940.1 | 35.417 | 144 | 87 | 2 | 81 | 220 | 34 | 175 | 2.98e-21 | 91.7 |
| Msa0163040 | AT5G53140.1 | 35.664 | 143 | 85 | 4 | 84 | 221 | 104 | 244 | 1.38e-20 | 89.4 |
| Msa0163040 | AT5G53140.2 | 35.664 | 143 | 85 | 4 | 84 | 221 | 104 | 244 | 1.38e-20 | 89.4 |
| Msa0163040 | AT2G25620.1 | 32.948 | 173 | 87 | 4 | 62 | 221 | 85 | 241 | 4.17e-20 | 87.8 |
| Msa0163040 | AT2G25620.2 | 32.948 | 173 | 87 | 4 | 62 | 221 | 85 | 241 | 4.17e-20 | 87.8 |
| Msa0163040 | AT4G28400.3 | 37.063 | 143 | 81 | 5 | 84 | 221 | 17 | 155 | 5.11e-20 | 85.9 |
| Msa0163040 | AT4G28400.2 | 37.063 | 143 | 81 | 5 | 84 | 221 | 39 | 177 | 5.29e-20 | 85.9 |
| Msa0163040 | AT4G28400.1 | 37.063 | 143 | 81 | 5 | 84 | 221 | 39 | 177 | 7.68e-20 | 85.9 |
| Msa0163040 | AT2G20630.1 | 34.532 | 139 | 85 | 3 | 82 | 216 | 34 | 170 | 1.98e-18 | 82.0 |
| Msa0163040 | AT2G20630.2 | 34.532 | 139 | 85 | 3 | 82 | 216 | 34 | 170 | 2.58e-18 | 81.6 |
| Msa0163040 | AT1G48040.1 | 31.492 | 181 | 103 | 5 | 61 | 222 | 61 | 239 | 1.82e-17 | 80.5 |
| Msa0163040 | AT3G15260.2 | 37.931 | 145 | 81 | 6 | 80 | 220 | 43 | 182 | 3.98e-17 | 78.6 |
| Msa0163040 | AT3G15260.1 | 37.931 | 145 | 81 | 6 | 80 | 220 | 43 | 182 | 3.98e-17 | 78.6 |
| Msa0163040 | AT3G51470.1 | 31.757 | 148 | 87 | 4 | 84 | 222 | 76 | 218 | 4.16e-17 | 79.3 |
| Msa0163040 | AT3G51470.2 | 31.757 | 148 | 87 | 4 | 84 | 222 | 32 | 174 | 6.45e-17 | 78.2 |
| Msa0163040 | AT1G78200.5 | 34.559 | 136 | 78 | 5 | 93 | 221 | 1 | 132 | 1.51e-15 | 73.6 |
| Msa0163040 | AT1G78200.4 | 34.559 | 136 | 78 | 5 | 93 | 221 | 1 | 132 | 1.51e-15 | 73.6 |
| Msa0163040 | AT2G34740.3 | 35.200 | 125 | 75 | 4 | 93 | 213 | 97 | 219 | 2.03e-15 | 73.9 |
| Msa0163040 | AT2G34740.2 | 34.043 | 141 | 87 | 4 | 77 | 213 | 99 | 237 | 2.04e-15 | 74.3 |
| Msa0163040 | AT2G34740.1 | 35.200 | 125 | 75 | 4 | 93 | 213 | 101 | 223 | 2.55e-15 | 73.9 |
| Msa0163040 | AT1G78200.1 | 34.559 | 136 | 78 | 5 | 93 | 221 | 46 | 177 | 3.23e-15 | 73.2 |
| Msa0163040 | AT1G78200.3 | 34.559 | 136 | 78 | 5 | 93 | 221 | 46 | 177 | 3.23e-15 | 73.2 |
| Msa0163040 | AT1G78200.2 | 34.559 | 136 | 78 | 5 | 93 | 221 | 46 | 177 | 3.23e-15 | 73.2 |
| Msa0163040 | AT2G40860.3 | 30.719 | 153 | 87 | 3 | 80 | 219 | 394 | 540 | 4.90e-15 | 73.9 |
| Msa0163040 | AT2G40860.2 | 30.719 | 153 | 87 | 3 | 80 | 219 | 394 | 540 | 5.35e-15 | 73.9 |
| Msa0163040 | AT2G40860.1 | 30.719 | 153 | 87 | 3 | 80 | 219 | 394 | 540 | 5.56e-15 | 73.6 |
| Msa0163040 | AT2G29380.1 | 32.692 | 156 | 82 | 4 | 88 | 220 | 85 | 240 | 6.52e-15 | 73.2 |
| Msa0163040 | AT2G40860.4 | 30.719 | 153 | 87 | 3 | 80 | 219 | 296 | 442 | 1.04e-14 | 72.8 |
| Msa0163040 | AT5G57050.3 | 30.921 | 152 | 85 | 5 | 84 | 220 | 135 | 281 | 1.06e-14 | 72.0 |
| Msa0163040 | AT5G57050.2 | 34.400 | 125 | 64 | 4 | 111 | 220 | 120 | 241 | 1.88e-14 | 71.6 |
| Msa0163040 | AT5G57050.1 | 34.400 | 125 | 64 | 4 | 111 | 220 | 160 | 281 | 1.96e-14 | 72.0 |
| Msa0163040 | AT4G26080.1 | 31.515 | 165 | 88 | 6 | 80 | 221 | 130 | 292 | 2.77e-14 | 71.6 |
| Msa0163040 | AT1G22280.3 | 33.846 | 130 | 76 | 6 | 93 | 213 | 47 | 175 | 4.36e-14 | 70.1 |
| Msa0163040 | AT3G11410.1 | 29.375 | 160 | 86 | 2 | 88 | 220 | 112 | 271 | 7.34e-14 | 70.1 |
| Msa0163040 | AT2G05050.1 | 50.769 | 65 | 31 | 1 | 93 | 156 | 1 | 65 | 1.60e-13 | 67.0 |
| Msa0163040 | AT5G51760.2 | 29.480 | 173 | 89 | 4 | 81 | 220 | 79 | 251 | 1.90e-13 | 68.9 |
| Msa0163040 | AT5G51760.1 | 29.480 | 173 | 89 | 4 | 81 | 220 | 109 | 281 | 2.16e-13 | 68.9 |
| Msa0163040 | AT3G17250.1 | 27.950 | 161 | 94 | 4 | 84 | 222 | 121 | 281 | 2.51e-13 | 68.6 |
| Msa0163040 | AT1G22280.2 | 34.127 | 126 | 75 | 6 | 93 | 213 | 47 | 169 | 4.20e-13 | 65.9 |
| Msa0163040 | AT1G22280.1 | 34.127 | 126 | 75 | 6 | 93 | 213 | 47 | 169 | 5.32e-13 | 67.0 |
| Msa0163040 | AT1G34750.2 | 35.200 | 125 | 75 | 4 | 93 | 213 | 48 | 170 | 7.50e-13 | 66.6 |
| Msa0163040 | AT1G34750.1 | 35.200 | 125 | 75 | 4 | 93 | 213 | 48 | 170 | 7.50e-13 | 66.6 |
| Msa0163040 | AT1G34750.3 | 35.200 | 125 | 75 | 4 | 93 | 213 | 48 | 170 | 7.50e-13 | 66.6 |
| Msa0163040 | AT1G18030.2 | 30.000 | 160 | 86 | 5 | 87 | 220 | 81 | 240 | 8.07e-13 | 66.6 |
| Msa0163040 | AT1G18030.1 | 30.000 | 160 | 86 | 5 | 87 | 220 | 81 | 240 | 8.68e-13 | 67.0 |
| Msa0163040 | AT1G34750.4 | 35.200 | 125 | 75 | 4 | 93 | 213 | 48 | 170 | 9.72e-13 | 65.9 |
| Msa0163040 | AT1G07430.1 | 29.134 | 127 | 73 | 2 | 111 | 220 | 157 | 283 | 1.64e-12 | 66.2 |
| Msa0163040 | AT1G17550.1 | 30.714 | 140 | 67 | 3 | 111 | 220 | 237 | 376 | 5.01e-12 | 65.1 |
| Msa0163040 | AT1G17550.2 | 30.714 | 140 | 67 | 3 | 111 | 220 | 237 | 376 | 5.01e-12 | 65.1 |
| Msa0163040 | AT5G06750.3 | 31.387 | 137 | 70 | 5 | 107 | 222 | 78 | 211 | 1.23e-11 | 63.5 |
| Msa0163040 | AT5G06750.1 | 31.387 | 137 | 70 | 5 | 107 | 222 | 78 | 211 | 1.23e-11 | 63.5 |
| Msa0163040 | AT1G72770.4 | 28.777 | 139 | 70 | 2 | 111 | 220 | 238 | 376 | 1.89e-11 | 63.2 |
| Msa0163040 | AT1G72770.1 | 28.777 | 139 | 70 | 2 | 111 | 220 | 238 | 376 | 1.89e-11 | 63.2 |
| Msa0163040 | AT1G72770.3 | 28.777 | 139 | 70 | 2 | 111 | 220 | 238 | 376 | 1.89e-11 | 63.2 |
| Msa0163040 | AT5G59220.2 | 28.387 | 155 | 87 | 3 | 88 | 220 | 119 | 271 | 2.62e-11 | 62.4 |
| Msa0163040 | AT3G62260.3 | 32.787 | 122 | 71 | 2 | 110 | 220 | 26 | 147 | 3.28e-11 | 62.0 |
| Msa0163040 | AT3G62260.2 | 32.787 | 122 | 71 | 2 | 110 | 220 | 116 | 237 | 3.29e-11 | 62.4 |
| Msa0163040 | AT3G62260.1 | 32.787 | 122 | 71 | 2 | 110 | 220 | 115 | 236 | 3.31e-11 | 62.4 |
| Msa0163040 | AT1G72770.2 | 28.777 | 139 | 70 | 2 | 111 | 220 | 238 | 376 | 3.36e-11 | 62.4 |
| Msa0163040 | AT1G72770.5 | 28.777 | 139 | 70 | 2 | 111 | 220 | 238 | 376 | 3.36e-11 | 62.4 |
| Msa0163040 | AT5G59220.1 | 28.387 | 155 | 87 | 3 | 88 | 220 | 119 | 271 | 3.39e-11 | 62.4 |
| Msa0163040 | AT2G20050.2 | 36.134 | 119 | 65 | 5 | 111 | 220 | 143 | 259 | 4.64e-11 | 62.4 |
| Msa0163040 | AT2G20050.1 | 36.134 | 119 | 65 | 5 | 111 | 220 | 143 | 259 | 4.86e-11 | 62.4 |
Find 58 sgRNAs with CRISPR-Local
Find 178 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCGTGGTGAAAACAATT+TGG | 0.251614 | 1_4:-40685489 | Msa0163040:intron |
| AGGCTTAATATACCTGTTTC+TGG | 0.253199 | 1_4:-40685647 | Msa0163040:CDS |
| GAGAGGGAGGAAGGAGTATA+TGG | 0.270402 | 1_4:-40685537 | Msa0163040:CDS |
| TTTACGTCAAACAAGGATTC+TGG | 0.283699 | 1_4:-40685710 | Msa0163040:CDS |
| TGCCGCAAATTCAGCGGCTT+TGG | 0.344353 | 1_4:+40684953 | None:intergenic |
| GTTGTGTAACAACATTCATT+AGG | 0.348033 | 1_4:-40684800 | Msa0163040:CDS |
| TTCGGTAATCGTAGACAAAA+AGG | 0.384988 | 1_4:+40685746 | None:intergenic |
| GTTGTTGAGGCGGAGGGAGA+TGG | 0.425322 | 1_4:-40685578 | Msa0163040:CDS |
| TAACTTAGAAAATAATATCT+TGG | 0.427509 | 1_4:-40684928 | Msa0163040:CDS |
| TGCCAAAGCCGCTGAATTTG+CGG | 0.431289 | 1_4:-40684955 | Msa0163040:CDS |
| TTACGTCAAACAAGGATTCT+GGG | 0.449937 | 1_4:-40685709 | Msa0163040:CDS |
| TTATTGTAAGAGAGGGAGGA+AGG | 0.455549 | 1_4:-40685546 | Msa0163040:CDS |
| ATGGAAGATCGTTATACAGC+TGG | 0.461700 | 1_4:-40685518 | Msa0163040:CDS |
| TTGTTGAGGCGGAGGGAGAT+GGG | 0.484067 | 1_4:-40685577 | Msa0163040:CDS |
| ACCTTCAAGGGAAGACGAAA+AGG | 0.493186 | 1_4:-40684688 | Msa0163040:CDS |
| GAGGGATGTTGTTGAGGCGG+AGG | 0.493467 | 1_4:-40685585 | Msa0163040:CDS |
| AACTTAGTTGTGTCTAATGC+TGG | 0.499105 | 1_4:-40684771 | Msa0163040:CDS |
| ATCTGATCACCGACCTTCAA+GGG | 0.504972 | 1_4:-40684700 | Msa0163040:CDS |
| CATCTGATCACCGACCTTCA+AGG | 0.507130 | 1_4:-40684701 | Msa0163040:CDS |
| TTTCGTCTTCCCTTGAAGGT+CGG | 0.508205 | 1_4:+40684691 | None:intergenic |
| ACAGCTGGGGTTAATCTTCG+TGG | 0.510384 | 1_4:-40685503 | Msa0163040:CDS |
| ATGTTTATTGTAAGAGAGGG+AGG | 0.514277 | 1_4:-40685550 | Msa0163040:CDS |
| AGAAAATAATATCTTGGATG+AGG | 0.515644 | 1_4:-40684922 | Msa0163040:CDS |
| CGACACCGTCTGCGGTGGCG+AGG | 0.516352 | 1_4:-40685604 | Msa0163040:CDS |
| ATTATGTTTATTGTAAGAGA+GGG | 0.518939 | 1_4:-40685553 | Msa0163040:CDS |
| ACGATTACCGAAACCACCCT+TGG | 0.527056 | 1_4:-40685735 | Msa0163040:CDS |
| CAGCGGCTTTGGCACCTCCA+TGG | 0.527083 | 1_4:+40684964 | None:intergenic |
| TATTATGTTTATTGTAAGAG+AGG | 0.528687 | 1_4:-40685554 | Msa0163040:CDS |
| GTGCTGTTATTAGTAGAGGA+GGG | 0.529836 | 1_4:-40684740 | Msa0163040:CDS |
| AGGGATGTTGTTGAGGCGGA+GGG | 0.535503 | 1_4:-40685584 | Msa0163040:CDS |
| CGTGCTGTTATTAGTAGAGG+AGG | 0.544244 | 1_4:-40684741 | Msa0163040:CDS |
| TGGAAGATCGTTATACAGCT+GGG | 0.545761 | 1_4:-40685517 | Msa0163040:CDS |
| TTTGGCGTATTTGATGGCCA+TGG | 0.545794 | 1_4:-40684981 | Msa0163040:CDS |
| GTAACAACATTCATTAGGAA+TGG | 0.546170 | 1_4:-40684795 | Msa0163040:CDS |
| TGAAGAGGAAACGACCTACC+AGG | 0.550346 | 1_4:-40685667 | Msa0163040:CDS |
| TGCCGTGCTGTTATTAGTAG+AGG | 0.550511 | 1_4:-40684744 | Msa0163040:CDS |
| TGCTGTTATTAGTAGAGGAG+GGG | 0.551553 | 1_4:-40684739 | Msa0163040:CDS |
| AGAAACAGGTATATTAAGCC+TGG | 0.552089 | 1_4:+40685649 | None:intergenic |
| GACACCGTCTGCGGTGGCGA+GGG | 0.554379 | 1_4:-40685603 | Msa0163040:CDS |
| ACATCCCTCGCCACCGCAGA+CGG | 0.561418 | 1_4:+40685599 | None:intergenic |
| TGAACTCGGAATCGGTATTG+AGG | 0.568588 | 1_4:+40684850 | None:intergenic |
| GCCACCGCAGACGGTGTCGC+CGG | 0.573609 | 1_4:+40685608 | None:intergenic |
| ACAGGTATATTAAGCCTGGT+AGG | 0.605164 | 1_4:+40685653 | None:intergenic |
| TAGTAGAGGAGGGGTTGTTG+AGG | 0.605389 | 1_4:-40684730 | Msa0163040:CDS |
| GAGCGACGAAGATGATGTTG+AGG | 0.609121 | 1_4:-40684892 | Msa0163040:CDS |
| GGCGAGGGATGTTGTTGAGG+CGG | 0.612440 | 1_4:-40685588 | Msa0163040:CDS |
| CGACGAAGATGATGTTGAGG+AGG | 0.613126 | 1_4:-40684889 | Msa0163040:CDS |
| TCCGGCGACACCGTCTGCGG+TGG | 0.616313 | 1_4:-40685609 | Msa0163040:CDS |
| GTTATTTGCCGCAAATTCAG+CGG | 0.620742 | 1_4:+40684947 | None:intergenic |
| TTCTGGGTCGCAGAATGATG+CGG | 0.622781 | 1_4:-40685693 | Msa0163040:CDS |
| TGTTCCGGCGACACCGTCTG+CGG | 0.623253 | 1_4:-40685612 | Msa0163040:CDS |
| GGTGGCGAGGGATGTTGTTG+AGG | 0.629842 | 1_4:-40685591 | Msa0163040:CDS |
| CTCCTCTACTAATAACAGCA+CGG | 0.646708 | 1_4:+40684742 | None:intergenic |
| GGAAGATCGTTATACAGCTG+GGG | 0.671830 | 1_4:-40685516 | Msa0163040:CDS |
| AAAGGACAGAATTGAGACCC+TGG | 0.675506 | 1_4:-40684670 | None:intergenic |
| GGTGAAGAAGGTGAAGAACA+CGG | 0.675581 | 1_4:+40685767 | None:intergenic |
| GTTGAGGAGGCAGTGAAGCG+CGG | 0.685913 | 1_4:-40684876 | Msa0163040:CDS |
| GGCGTATTTGATGGCCATGG+AGG | 0.699437 | 1_4:-40684978 | Msa0163040:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGAATATATAATATTGATT+TGG | - | chr1_4:40685026-40685045 | Msa0163040:intron | 10.0% |
| !!! | TTGAATATATAATATTGATT+TGG | - | chr1_4:40685026-40685045 | Msa0163040:intron | 10.0% |
| !!! | ATATATAATATTGATTTGGT+TGG | - | chr1_4:40685030-40685049 | Msa0163040:intron | 15.0% |
| !! | TAACTTAGAAAATAATATCT+TGG | - | chr1_4:40685537-40685556 | Msa0163040:CDS | 15.0% |
| !!! | ATATATAATATTGATTTGGT+TGG | - | chr1_4:40685030-40685049 | Msa0163040:intron | 15.0% |
| !! | TAACTTAGAAAATAATATCT+TGG | - | chr1_4:40685537-40685556 | Msa0163040:CDS | 15.0% |
| !! | TATTATGTTTATTGTAAGAG+AGG | - | chr1_4:40684911-40684930 | Msa0163040:CDS | 20.0% |
| !! | ATTATGTTTATTGTAAGAGA+GGG | - | chr1_4:40684912-40684931 | Msa0163040:CDS | 20.0% |
| !!! | TTGATATGTTTTTGTCAATT+GGG | - | chr1_4:40685061-40685080 | Msa0163040:intron | 20.0% |
| !! | TTCAATATTTGTTCTTGATT+TGG | - | chr1_4:40685161-40685180 | Msa0163040:intron | 20.0% |
| !! | CACAATTCAAATTTAACTAA+TGG | + | chr1_4:40685302-40685321 | None:intergenic | 20.0% |
| !!! | TAAATCTTTTTTCATGAACT+CGG | + | chr1_4:40685632-40685651 | None:intergenic | 20.0% |
| !! | TTCATGAAAAAAGATTTACA+TGG | - | chr1_4:40685634-40685653 | Msa0163040:CDS | 20.0% |
| !! | TATTATGTTTATTGTAAGAG+AGG | - | chr1_4:40684911-40684930 | Msa0163040:CDS | 20.0% |
| !! | ATTATGTTTATTGTAAGAGA+GGG | - | chr1_4:40684912-40684931 | Msa0163040:CDS | 20.0% |
| !!! | TTGATATGTTTTTGTCAATT+GGG | - | chr1_4:40685061-40685080 | Msa0163040:intron | 20.0% |
| !! | TTCAATATTTGTTCTTGATT+TGG | - | chr1_4:40685161-40685180 | Msa0163040:intron | 20.0% |
| !! | CACAATTCAAATTTAACTAA+TGG | + | chr1_4:40685302-40685321 | None:intergenic | 20.0% |
| !!! | TAAATCTTTTTTCATGAACT+CGG | + | chr1_4:40685632-40685651 | None:intergenic | 20.0% |
| !! | TTCATGAAAAAAGATTTACA+TGG | - | chr1_4:40685634-40685653 | Msa0163040:CDS | 20.0% |
| !!! | GTTGATATGTTTTTGTCAAT+TGG | - | chr1_4:40685060-40685079 | Msa0163040:intron | 25.0% |
| !!! | ACTTTAGTTCTTAATTGATC+TGG | - | chr1_4:40685101-40685120 | Msa0163040:intron | 25.0% |
| ! | TTTGATTGAATCCAATTGTT+TGG | - | chr1_4:40685124-40685143 | Msa0163040:intron | 25.0% |
| ! | GAAGTTAAAAAGTTTGTCTT+AGG | - | chr1_4:40685271-40685290 | Msa0163040:intron | 25.0% |
| ! | GTAGATAGTTGAAACAAATT+AGG | - | chr1_4:40685321-40685340 | Msa0163040:intron | 25.0% |
| !! | TTGTGTAAAATAACTTGTAC+AGG | - | chr1_4:40685434-40685453 | Msa0163040:intron | 25.0% |
| !!! | GTTTATTTTGTGATAATTGC+AGG | - | chr1_4:40685456-40685475 | Msa0163040:intron | 25.0% |
| ! | AGAAAATAATATCTTGGATG+AGG | - | chr1_4:40685543-40685562 | Msa0163040:CDS | 25.0% |
| ! | ATGAAAAAAGATTTACATGG+TGG | - | chr1_4:40685637-40685656 | Msa0163040:CDS | 25.0% |
| !!! | GTTGATATGTTTTTGTCAAT+TGG | - | chr1_4:40685060-40685079 | Msa0163040:intron | 25.0% |
| !!! | ACTTTAGTTCTTAATTGATC+TGG | - | chr1_4:40685101-40685120 | Msa0163040:intron | 25.0% |
| ! | TTTGATTGAATCCAATTGTT+TGG | - | chr1_4:40685124-40685143 | Msa0163040:intron | 25.0% |
| ! | GAAGTTAAAAAGTTTGTCTT+AGG | - | chr1_4:40685271-40685290 | Msa0163040:intron | 25.0% |
| ! | GTAGATAGTTGAAACAAATT+AGG | - | chr1_4:40685321-40685340 | Msa0163040:intron | 25.0% |
| !! | TTGTGTAAAATAACTTGTAC+AGG | - | chr1_4:40685434-40685453 | Msa0163040:intron | 25.0% |
| !!! | GTTTATTTTGTGATAATTGC+AGG | - | chr1_4:40685456-40685475 | Msa0163040:intron | 25.0% |
| ! | AGAAAATAATATCTTGGATG+AGG | - | chr1_4:40685543-40685562 | Msa0163040:CDS | 25.0% |
| ! | ATGAAAAAAGATTTACATGG+TGG | - | chr1_4:40685637-40685656 | Msa0163040:CDS | 25.0% |
| TTGTTTGACGTAAAAACCAA+GGG | + | chr1_4:40684749-40684768 | None:intergenic | 30.0% | |
| CTTCAAATTCACCAAACAAT+TGG | + | chr1_4:40685138-40685157 | None:intergenic | 30.0% | |
| ! | AAAGTCAATTTTAAGCTGCT+AGG | - | chr1_4:40685226-40685245 | Msa0163040:intron | 30.0% |
| !! | GCTTGATGTTGATGATAAAT+TGG | - | chr1_4:40685394-40685413 | Msa0163040:intron | 30.0% |
| !!! | TGATAATTGCAGGCTTTTTT+TGG | - | chr1_4:40685466-40685485 | Msa0163040:intron | 30.0% |
| !!! | TTTTTTCATGAACTCGGAAT+CGG | + | chr1_4:40685626-40685645 | None:intergenic | 30.0% |
| GTTGTGTAACAACATTCATT+AGG | - | chr1_4:40685665-40685684 | Msa0163040:CDS | 30.0% | |
| GTAACAACATTCATTAGGAA+TGG | - | chr1_4:40685670-40685689 | Msa0163040:CDS | 30.0% | |
| TTGTTTGACGTAAAAACCAA+GGG | + | chr1_4:40684749-40684768 | None:intergenic | 30.0% | |
| CTTCAAATTCACCAAACAAT+TGG | + | chr1_4:40685138-40685157 | None:intergenic | 30.0% | |
| ! | AAAGTCAATTTTAAGCTGCT+AGG | - | chr1_4:40685226-40685245 | Msa0163040:intron | 30.0% |
| !! | GCTTGATGTTGATGATAAAT+TGG | - | chr1_4:40685394-40685413 | Msa0163040:intron | 30.0% |
| !!! | TGATAATTGCAGGCTTTTTT+TGG | - | chr1_4:40685466-40685485 | Msa0163040:intron | 30.0% |
| !!! | TTTTTTCATGAACTCGGAAT+CGG | + | chr1_4:40685626-40685645 | None:intergenic | 30.0% |
| GTTGTGTAACAACATTCATT+AGG | - | chr1_4:40685665-40685684 | Msa0163040:CDS | 30.0% | |
| GTAACAACATTCATTAGGAA+TGG | - | chr1_4:40685670-40685689 | Msa0163040:CDS | 30.0% | |
| TTCGGTAATCGTAGACAAAA+AGG | + | chr1_4:40684722-40684741 | None:intergenic | 35.0% | |
| CTTGTTTGACGTAAAAACCA+AGG | + | chr1_4:40684750-40684769 | None:intergenic | 35.0% | |
| !! | CTTGGTTTTTACGTCAAACA+AGG | - | chr1_4:40684748-40684767 | Msa0163040:CDS | 35.0% |
| TTTACGTCAAACAAGGATTC+TGG | - | chr1_4:40684755-40684774 | Msa0163040:CDS | 35.0% | |
| TTACGTCAAACAAGGATTCT+GGG | - | chr1_4:40684756-40684775 | Msa0163040:CDS | 35.0% | |
| AGAAACAGGTATATTAAGCC+TGG | + | chr1_4:40684819-40684838 | None:intergenic | 35.0% | |
| AGGCTTAATATACCTGTTTC+TGG | - | chr1_4:40684818-40684837 | Msa0163040:CDS | 35.0% | |
| ATGTTTATTGTAAGAGAGGG+AGG | - | chr1_4:40684915-40684934 | Msa0163040:CDS | 35.0% | |
| TCTTCGTGGTGAAAACAATT+TGG | - | chr1_4:40684976-40684995 | Msa0163040:CDS | 35.0% | |
| !!! | GCTTTTTTTGGCGTATTTGA+TGG | - | chr1_4:40685478-40685497 | Msa0163040:intron | 35.0% |
| AACTTAGTTGTGTCTAATGC+TGG | - | chr1_4:40685694-40685713 | Msa0163040:CDS | 35.0% | |
| TTCGGTAATCGTAGACAAAA+AGG | + | chr1_4:40684722-40684741 | None:intergenic | 35.0% | |
| CTTGTTTGACGTAAAAACCA+AGG | + | chr1_4:40684750-40684769 | None:intergenic | 35.0% | |
| !! | CTTGGTTTTTACGTCAAACA+AGG | - | chr1_4:40684748-40684767 | Msa0163040:CDS | 35.0% |
| TTTACGTCAAACAAGGATTC+TGG | - | chr1_4:40684755-40684774 | Msa0163040:CDS | 35.0% | |
| TTACGTCAAACAAGGATTCT+GGG | - | chr1_4:40684756-40684775 | Msa0163040:CDS | 35.0% | |
| AGAAACAGGTATATTAAGCC+TGG | + | chr1_4:40684819-40684838 | None:intergenic | 35.0% | |
| AGGCTTAATATACCTGTTTC+TGG | - | chr1_4:40684818-40684837 | Msa0163040:CDS | 35.0% | |
| ATGTTTATTGTAAGAGAGGG+AGG | - | chr1_4:40684915-40684934 | Msa0163040:CDS | 35.0% | |
| TCTTCGTGGTGAAAACAATT+TGG | - | chr1_4:40684976-40684995 | Msa0163040:CDS | 35.0% | |
| !!! | GCTTTTTTTGGCGTATTTGA+TGG | - | chr1_4:40685478-40685497 | Msa0163040:intron | 35.0% |
| AACTTAGTTGTGTCTAATGC+TGG | - | chr1_4:40685694-40685713 | Msa0163040:CDS | 35.0% | |
| CGTAGACAAAAAGGTGAAGA+AGG | + | chr1_4:40684713-40684732 | None:intergenic | 40.0% | |
| GTAAAAACCAAGGGTGGTTT+CGG | + | chr1_4:40684740-40684759 | None:intergenic | 40.0% | |
| TTTGACGTAAAAACCAAGGG+TGG | + | chr1_4:40684746-40684765 | None:intergenic | 40.0% | |
| !!! | AGAATGATGCGGTTTTGAAG+AGG | - | chr1_4:40684783-40684802 | Msa0163040:CDS | 40.0% |
| ACAGGTATATTAAGCCTGGT+AGG | + | chr1_4:40684815-40684834 | None:intergenic | 40.0% | |
| ! | CAAAAAGCATGTCCAGAAAC+AGG | + | chr1_4:40684833-40684852 | None:intergenic | 40.0% |
| !! | TGGACATGCTTTTTGTGTTC+CGG | - | chr1_4:40684838-40684857 | Msa0163040:CDS | 40.0% |
| TTATTGTAAGAGAGGGAGGA+AGG | - | chr1_4:40684919-40684938 | Msa0163040:CDS | 40.0% | |
| ATGGAAGATCGTTATACAGC+TGG | - | chr1_4:40684947-40684966 | Msa0163040:CDS | 40.0% | |
| TGGAAGATCGTTATACAGCT+GGG | - | chr1_4:40684948-40684967 | Msa0163040:CDS | 40.0% | |
| !! | CTTGATTTGGTAGTTGCATC+TGG | - | chr1_4:40685174-40685193 | Msa0163040:intron | 40.0% |
| GTTATTTGCCGCAAATTCAG+CGG | + | chr1_4:40685521-40685540 | None:intergenic | 40.0% | |
| CTCCTCTACTAATAACAGCA+CGG | + | chr1_4:40685726-40685745 | None:intergenic | 40.0% | |
| ! | GTGCTGTTATTAGTAGAGGA+GGG | - | chr1_4:40685725-40685744 | Msa0163040:CDS | 40.0% |
| TGCTGTTATTAGTAGAGGAG+GGG | - | chr1_4:40685726-40685745 | Msa0163040:CDS | 40.0% | |
| CGTAGACAAAAAGGTGAAGA+AGG | + | chr1_4:40684713-40684732 | None:intergenic | 40.0% | |
| GTAAAAACCAAGGGTGGTTT+CGG | + | chr1_4:40684740-40684759 | None:intergenic | 40.0% | |
| TTTGACGTAAAAACCAAGGG+TGG | + | chr1_4:40684746-40684765 | None:intergenic | 40.0% | |
| !!! | AGAATGATGCGGTTTTGAAG+AGG | - | chr1_4:40684783-40684802 | Msa0163040:CDS | 40.0% |
| ACAGGTATATTAAGCCTGGT+AGG | + | chr1_4:40684815-40684834 | None:intergenic | 40.0% | |
| ! | CAAAAAGCATGTCCAGAAAC+AGG | + | chr1_4:40684833-40684852 | None:intergenic | 40.0% |
| !! | TGGACATGCTTTTTGTGTTC+CGG | - | chr1_4:40684838-40684857 | Msa0163040:CDS | 40.0% |
| TTATTGTAAGAGAGGGAGGA+AGG | - | chr1_4:40684919-40684938 | Msa0163040:CDS | 40.0% | |
| ATGGAAGATCGTTATACAGC+TGG | - | chr1_4:40684947-40684966 | Msa0163040:CDS | 40.0% | |
| TGGAAGATCGTTATACAGCT+GGG | - | chr1_4:40684948-40684967 | Msa0163040:CDS | 40.0% | |
| !! | CTTGATTTGGTAGTTGCATC+TGG | - | chr1_4:40685174-40685193 | Msa0163040:intron | 40.0% |
| GTTATTTGCCGCAAATTCAG+CGG | + | chr1_4:40685521-40685540 | None:intergenic | 40.0% | |
| CTCCTCTACTAATAACAGCA+CGG | + | chr1_4:40685726-40685745 | None:intergenic | 40.0% | |
| ! | GTGCTGTTATTAGTAGAGGA+GGG | - | chr1_4:40685725-40685744 | Msa0163040:CDS | 40.0% |
| TGCTGTTATTAGTAGAGGAG+GGG | - | chr1_4:40685726-40685745 | Msa0163040:CDS | 40.0% | |
| GGTGAAGAAGGTGAAGAACA+CGG | + | chr1_4:40684701-40684720 | None:intergenic | 45.0% | |
| GGAAGATCGTTATACAGCTG+GGG | - | chr1_4:40684949-40684968 | Msa0163040:CDS | 45.0% | |
| ! | TTTGGCGTATTTGATGGCCA+TGG | - | chr1_4:40685484-40685503 | Msa0163040:intron | 45.0% |
| TGAACTCGGAATCGGTATTG+AGG | + | chr1_4:40685618-40685637 | None:intergenic | 45.0% | |
| ! | TGCCGTGCTGTTATTAGTAG+AGG | - | chr1_4:40685721-40685740 | Msa0163040:CDS | 45.0% |
| ! | CGTGCTGTTATTAGTAGAGG+AGG | - | chr1_4:40685724-40685743 | Msa0163040:CDS | 45.0% |
| ATCTGATCACCGACCTTCAA+GGG | - | chr1_4:40685765-40685784 | Msa0163040:CDS | 45.0% | |
| TTTCGTCTTCCCTTGAAGGT+CGG | + | chr1_4:40685777-40685796 | None:intergenic | 45.0% | |
| ACCTTCAAGGGAAGACGAAA+AGG | - | chr1_4:40685777-40685796 | Msa0163040:CDS | 45.0% | |
| ! | TCCTTTTCGTCTTCCCTTGA+AGG | + | chr1_4:40685781-40685800 | None:intergenic | 45.0% |
| GGTGAAGAAGGTGAAGAACA+CGG | + | chr1_4:40684701-40684720 | None:intergenic | 45.0% | |
| GGAAGATCGTTATACAGCTG+GGG | - | chr1_4:40684949-40684968 | Msa0163040:CDS | 45.0% | |
| ! | TTTGGCGTATTTGATGGCCA+TGG | - | chr1_4:40685484-40685503 | Msa0163040:intron | 45.0% |
| TGAACTCGGAATCGGTATTG+AGG | + | chr1_4:40685618-40685637 | None:intergenic | 45.0% | |
| ! | TGCCGTGCTGTTATTAGTAG+AGG | - | chr1_4:40685721-40685740 | Msa0163040:CDS | 45.0% |
| ! | CGTGCTGTTATTAGTAGAGG+AGG | - | chr1_4:40685724-40685743 | Msa0163040:CDS | 45.0% |
| ATCTGATCACCGACCTTCAA+GGG | - | chr1_4:40685765-40685784 | Msa0163040:CDS | 45.0% | |
| TTTCGTCTTCCCTTGAAGGT+CGG | + | chr1_4:40685777-40685796 | None:intergenic | 45.0% | |
| ACCTTCAAGGGAAGACGAAA+AGG | - | chr1_4:40685777-40685796 | Msa0163040:CDS | 45.0% | |
| ! | TCCTTTTCGTCTTCCCTTGA+AGG | + | chr1_4:40685781-40685800 | None:intergenic | 45.0% |
| ACGATTACCGAAACCACCCT+TGG | - | chr1_4:40684730-40684749 | Msa0163040:CDS | 50.0% | |
| TTCTGGGTCGCAGAATGATG+CGG | - | chr1_4:40684772-40684791 | Msa0163040:CDS | 50.0% | |
| TGAAGAGGAAACGACCTACC+AGG | - | chr1_4:40684798-40684817 | Msa0163040:CDS | 50.0% | |
| ! | GAGAGGGAGGAAGGAGTATA+TGG | - | chr1_4:40684928-40684947 | Msa0163040:CDS | 50.0% |
| ACAGCTGGGGTTAATCTTCG+TGG | - | chr1_4:40684962-40684981 | Msa0163040:CDS | 50.0% | |
| TGCCAAAGCCGCTGAATTTG+CGG | - | chr1_4:40685510-40685529 | Msa0163040:CDS | 50.0% | |
| GAGCGACGAAGATGATGTTG+AGG | - | chr1_4:40685573-40685592 | Msa0163040:CDS | 50.0% | |
| CGACGAAGATGATGTTGAGG+AGG | - | chr1_4:40685576-40685595 | Msa0163040:CDS | 50.0% | |
| TAGTAGAGGAGGGGTTGTTG+AGG | - | chr1_4:40685735-40685754 | Msa0163040:CDS | 50.0% | |
| CATCTGATCACCGACCTTCA+AGG | - | chr1_4:40685764-40685783 | Msa0163040:CDS | 50.0% | |
| ACGATTACCGAAACCACCCT+TGG | - | chr1_4:40684730-40684749 | Msa0163040:CDS | 50.0% | |
| TTCTGGGTCGCAGAATGATG+CGG | - | chr1_4:40684772-40684791 | Msa0163040:CDS | 50.0% | |
| TGAAGAGGAAACGACCTACC+AGG | - | chr1_4:40684798-40684817 | Msa0163040:CDS | 50.0% | |
| ! | GAGAGGGAGGAAGGAGTATA+TGG | - | chr1_4:40684928-40684947 | Msa0163040:CDS | 50.0% |
| ACAGCTGGGGTTAATCTTCG+TGG | - | chr1_4:40684962-40684981 | Msa0163040:CDS | 50.0% | |
| TGCCAAAGCCGCTGAATTTG+CGG | - | chr1_4:40685510-40685529 | Msa0163040:CDS | 50.0% | |
| GAGCGACGAAGATGATGTTG+AGG | - | chr1_4:40685573-40685592 | Msa0163040:CDS | 50.0% | |
| CGACGAAGATGATGTTGAGG+AGG | - | chr1_4:40685576-40685595 | Msa0163040:CDS | 50.0% | |
| TAGTAGAGGAGGGGTTGTTG+AGG | - | chr1_4:40685735-40685754 | Msa0163040:CDS | 50.0% | |
| CATCTGATCACCGACCTTCA+AGG | - | chr1_4:40685764-40685783 | Msa0163040:CDS | 50.0% | |
| AGGGATGTTGTTGAGGCGGA+GGG | - | chr1_4:40684881-40684900 | Msa0163040:CDS | 55.0% | |
| TTGTTGAGGCGGAGGGAGAT+GGG | - | chr1_4:40684888-40684907 | Msa0163040:CDS | 55.0% | |
| ! | GGCGTATTTGATGGCCATGG+AGG | - | chr1_4:40685487-40685506 | Msa0163040:intron | 55.0% |
| TGCCGCAAATTCAGCGGCTT+TGG | + | chr1_4:40685515-40685534 | None:intergenic | 55.0% | |
| AGGGATGTTGTTGAGGCGGA+GGG | - | chr1_4:40684881-40684900 | Msa0163040:CDS | 55.0% | |
| TTGTTGAGGCGGAGGGAGAT+GGG | - | chr1_4:40684888-40684907 | Msa0163040:CDS | 55.0% | |
| ! | GGCGTATTTGATGGCCATGG+AGG | - | chr1_4:40685487-40685506 | Msa0163040:intron | 55.0% |
| TGCCGCAAATTCAGCGGCTT+TGG | + | chr1_4:40685515-40685534 | None:intergenic | 55.0% | |
| GGTGGCGAGGGATGTTGTTG+AGG | - | chr1_4:40684874-40684893 | Msa0163040:CDS | 60.0% | |
| GGCGAGGGATGTTGTTGAGG+CGG | - | chr1_4:40684877-40684896 | Msa0163040:CDS | 60.0% | |
| GAGGGATGTTGTTGAGGCGG+AGG | - | chr1_4:40684880-40684899 | Msa0163040:CDS | 60.0% | |
| GTTGTTGAGGCGGAGGGAGA+TGG | - | chr1_4:40684887-40684906 | Msa0163040:CDS | 60.0% | |
| GTTGAGGAGGCAGTGAAGCG+CGG | - | chr1_4:40685589-40685608 | Msa0163040:CDS | 60.0% | |
| GGTGGCGAGGGATGTTGTTG+AGG | - | chr1_4:40684874-40684893 | Msa0163040:CDS | 60.0% | |
| GGCGAGGGATGTTGTTGAGG+CGG | - | chr1_4:40684877-40684896 | Msa0163040:CDS | 60.0% | |
| GAGGGATGTTGTTGAGGCGG+AGG | - | chr1_4:40684880-40684899 | Msa0163040:CDS | 60.0% | |
| GTTGTTGAGGCGGAGGGAGA+TGG | - | chr1_4:40684887-40684906 | Msa0163040:CDS | 60.0% | |
| GTTGAGGAGGCAGTGAAGCG+CGG | - | chr1_4:40685589-40685608 | Msa0163040:CDS | 60.0% | |
| TGTTCCGGCGACACCGTCTG+CGG | - | chr1_4:40684853-40684872 | Msa0163040:CDS | 65.0% | |
| ACATCCCTCGCCACCGCAGA+CGG | + | chr1_4:40684869-40684888 | None:intergenic | 65.0% | |
| ! | CAGCGGCTTTGGCACCTCCA+TGG | + | chr1_4:40685504-40685523 | None:intergenic | 65.0% |
| TGTTCCGGCGACACCGTCTG+CGG | - | chr1_4:40684853-40684872 | Msa0163040:CDS | 65.0% | |
| ACATCCCTCGCCACCGCAGA+CGG | + | chr1_4:40684869-40684888 | None:intergenic | 65.0% | |
| ! | CAGCGGCTTTGGCACCTCCA+TGG | + | chr1_4:40685504-40685523 | None:intergenic | 65.0% |
| GACACCGTCTGCGGTGGCGA+GGG | - | chr1_4:40684862-40684881 | Msa0163040:CDS | 70.0% | |
| GACACCGTCTGCGGTGGCGA+GGG | - | chr1_4:40684862-40684881 | Msa0163040:CDS | 70.0% | |
| TCCGGCGACACCGTCTGCGG+TGG | - | chr1_4:40684856-40684875 | Msa0163040:CDS | 75.0% | |
| !! | GCCACCGCAGACGGTGTCGC+CGG | + | chr1_4:40684860-40684879 | None:intergenic | 75.0% |
| CGACACCGTCTGCGGTGGCG+AGG | - | chr1_4:40684861-40684880 | Msa0163040:CDS | 75.0% | |
| TCCGGCGACACCGTCTGCGG+TGG | - | chr1_4:40684856-40684875 | Msa0163040:CDS | 75.0% | |
| !! | GCCACCGCAGACGGTGTCGC+CGG | + | chr1_4:40684860-40684879 | None:intergenic | 75.0% |
| CGACACCGTCTGCGGTGGCG+AGG | - | chr1_4:40684861-40684880 | Msa0163040:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 40684671 | 40685816 | 40684671 | ID=Msa0163040;Name=Msa0163040 |
| chr1_4 | mRNA | 40684671 | 40685816 | 40684671 | ID=Msa0163040-mRNA-1;Parent=Msa0163040;Name=Msa0163040-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0|0|1|1|1|2|0|222 |
| chr1_4 | exon | 40685490 | 40685816 | 40685490 | ID=Msa0163040-mRNA-1:exon:11742;Parent=Msa0163040-mRNA-1 |
| chr1_4 | exon | 40684671 | 40685009 | 40684671 | ID=Msa0163040-mRNA-1:exon:11741;Parent=Msa0163040-mRNA-1 |
| chr1_4 | CDS | 40685490 | 40685816 | 40685490 | ID=Msa0163040-mRNA-1:cds;Parent=Msa0163040-mRNA-1 |
| chr1_4 | CDS | 40684671 | 40685009 | 40684671 | ID=Msa0163040-mRNA-1:cds;Parent=Msa0163040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
