Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0558810 | XP_003629722.2 | 68.563 | 334 | 19 | 3 | 1 | 248 | 1 | 334 | 1.26e-145 | 420 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0558810 | sp|Q9Y3A4|RRP7A_HUMAN | 31.788 | 151 | 87 | 4 | 104 | 248 | 140 | 280 | 2.46e-13 | 71.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0558810 | G7LIM3 | 68.563 | 334 | 19 | 3 | 1 | 248 | 1 | 334 | 6.04e-146 | 420 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002490 | Msa0558810 | 0.805942 | 1.046130e-49 | -8.615850e-47 |
| Msa0011960 | Msa0558810 | 0.808981 | 2.370656e-50 | -8.615850e-47 |
| Msa0025730 | Msa0558810 | 0.830141 | 3.470082e-55 | -8.615850e-47 |
| Msa0027260 | Msa0558810 | 0.812466 | 4.179364e-51 | -8.615850e-47 |
| Msa0032260 | Msa0558810 | 0.849414 | 3.283689e-60 | -8.615850e-47 |
| Msa0032580 | Msa0558810 | 0.804906 | 1.725307e-49 | -8.615850e-47 |
| Msa0040690 | Msa0558810 | 0.811207 | 7.856432e-51 | -8.615850e-47 |
| Msa0043660 | Msa0558810 | 0.811208 | 7.852249e-51 | -8.615850e-47 |
| Msa0044020 | Msa0558810 | 0.803269 | 3.779301e-49 | -8.615850e-47 |
| Msa0045490 | Msa0558810 | 0.832137 | 1.122180e-55 | -8.615850e-47 |
| Msa0047160 | Msa0558810 | 0.859119 | 5.156413e-63 | -8.615850e-47 |
| Msa0048180 | Msa0558810 | 0.801044 | 1.084173e-48 | -8.615850e-47 |
| Msa0055150 | Msa0558810 | 0.809724 | 1.642594e-50 | -8.615850e-47 |
| Msa0057140 | Msa0558810 | 0.845329 | 4.346968e-59 | -8.615850e-47 |
| Msa0076000 | Msa0558810 | 0.836172 | 1.093519e-56 | -8.615850e-47 |
| Msa0081230 | Msa0558810 | 0.821208 | 4.561577e-53 | -8.615850e-47 |
| Msa0084940 | Msa0558810 | 0.804882 | 1.745054e-49 | -8.615850e-47 |
| Msa0094470 | Msa0558810 | 0.863049 | 3.283382e-64 | -8.615850e-47 |
| Msa0094920 | Msa0558810 | 0.811075 | 8.392714e-51 | -8.615850e-47 |
| Msa0097990 | Msa0558810 | 0.807300 | 5.406192e-50 | -8.615850e-47 |
| Msa0127310 | Msa0558810 | 0.841560 | 4.413817e-58 | -8.615850e-47 |
| Msa0137550 | Msa0558810 | 0.812501 | 4.107468e-51 | -8.615850e-47 |
| Msa0140300 | Msa0558810 | 0.815837 | 7.534459e-52 | -8.615850e-47 |
| Msa0141340 | Msa0558810 | 0.832485 | 9.204028e-56 | -8.615850e-47 |
| Msa0146770 | Msa0558810 | 0.806248 | 9.021416e-50 | -8.615850e-47 |
| Msa0157100 | Msa0558810 | 0.803750 | 3.003432e-49 | -8.615850e-47 |
| Msa0170570 | Msa0558810 | 0.805219 | 1.483671e-49 | -8.615850e-47 |
| Msa0182030 | Msa0558810 | 0.805551 | 1.263827e-49 | -8.615850e-47 |
| Msa0183900 | Msa0558810 | 0.806628 | 7.500690e-50 | -8.615850e-47 |
| Msa0184780 | Msa0558810 | 0.805128 | 1.550472e-49 | -8.615850e-47 |
| Msa0186890 | Msa0558810 | 0.807035 | 6.153264e-50 | -8.615850e-47 |
| Msa0187930 | Msa0558810 | 0.806140 | 9.506053e-50 | -8.615850e-47 |
| Msa0189300 | Msa0558810 | 0.828539 | 8.498643e-55 | -8.615850e-47 |
| Msa0194540 | Msa0558810 | 0.808763 | 2.639739e-50 | -8.615850e-47 |
| Msa0199690 | Msa0558810 | 0.805309 | 1.420695e-49 | -8.615850e-47 |
| Msa0204980 | Msa0558810 | 0.816372 | 5.721461e-52 | -8.615850e-47 |
| Msa0211860 | Msa0558810 | 0.806337 | 8.638169e-50 | -8.615850e-47 |
| Msa0220720 | Msa0558810 | 0.803537 | 3.325175e-49 | -8.615850e-47 |
| Msa0225740 | Msa0558810 | 0.800015 | 1.757184e-48 | -8.615850e-47 |
| Msa0226470 | Msa0558810 | 0.850353 | 1.793939e-60 | -8.615850e-47 |
| Msa0227400 | Msa0558810 | 0.857962 | 1.141414e-62 | -8.615850e-47 |
| Msa0228070 | Msa0558810 | 0.811122 | 8.198964e-51 | -8.615850e-47 |
| Msa0231660 | Msa0558810 | 0.820675 | 6.052509e-53 | -8.615850e-47 |
| Msa0231880 | Msa0558810 | 0.833873 | 4.152713e-56 | -8.615850e-47 |
| Msa0366890 | Msa0558810 | 0.823563 | 1.294697e-53 | -8.615850e-47 |
| Msa0369450 | Msa0558810 | 0.816783 | 4.628479e-52 | -8.615850e-47 |
| Msa0376300 | Msa0558810 | 0.821261 | 4.436710e-53 | -8.615850e-47 |
| Msa0376310 | Msa0558810 | 0.819368 | 1.204584e-52 | -8.615850e-47 |
| Msa0376690 | Msa0558810 | 0.803281 | 3.756866e-49 | -8.615850e-47 |
| Msa0385580 | Msa0558810 | 0.829926 | 3.916832e-55 | -8.615850e-47 |
| Msa0387730 | Msa0558810 | 0.832881 | 7.339482e-56 | -8.615850e-47 |
| Msa0388700 | Msa0558810 | 0.805149 | 1.534201e-49 | -8.615850e-47 |
| Msa0397540 | Msa0558810 | 0.803134 | 4.030212e-49 | -8.615850e-47 |
| Msa0402330 | Msa0558810 | 0.801310 | 9.563005e-49 | -8.615850e-47 |
| Msa0419520 | Msa0558810 | 0.801383 | 9.239172e-49 | -8.615850e-47 |
| Msa0422840 | Msa0558810 | 0.818753 | 1.662730e-52 | -8.615850e-47 |
| Msa0422920 | Msa0558810 | 0.810601 | 1.062695e-50 | -8.615850e-47 |
| Msa0425220 | Msa0558810 | 0.803369 | 3.603242e-49 | -8.615850e-47 |
| Msa0453230 | Msa0558810 | 0.805220 | 1.482982e-49 | -8.615850e-47 |
| Msa0458060 | Msa0558810 | 0.816853 | 4.462954e-52 | -8.615850e-47 |
| Msa0467780 | Msa0558810 | 0.816319 | 5.878824e-52 | -8.615850e-47 |
| Msa0239450 | Msa0558810 | 0.815671 | 8.202387e-52 | -8.615850e-47 |
| Msa0244780 | Msa0558810 | 0.803571 | 3.271507e-49 | -8.615850e-47 |
| Msa0246430 | Msa0558810 | 0.809550 | 1.789991e-50 | -8.615850e-47 |
| Msa0260210 | Msa0558810 | 0.807710 | 4.424685e-50 | -8.615850e-47 |
| Msa0262310 | Msa0558810 | 0.824229 | 9.038030e-54 | -8.615850e-47 |
| Msa0264150 | Msa0558810 | 0.809721 | 1.644801e-50 | -8.615850e-47 |
| Msa0264570 | Msa0558810 | 0.812027 | 5.211006e-51 | -8.615850e-47 |
| Msa0267970 | Msa0558810 | 0.806005 | 1.014656e-49 | -8.615850e-47 |
| Msa0268130 | Msa0558810 | 0.807773 | 4.291078e-50 | -8.615850e-47 |
| Msa0270220 | Msa0558810 | -0.800091 | 1.695306e-48 | -8.615850e-47 |
| Msa0271530 | Msa0558810 | 0.805419 | 1.347407e-49 | -8.615850e-47 |
| Msa0278790 | Msa0558810 | 0.806819 | 6.834136e-50 | -8.615850e-47 |
| Msa0291500 | Msa0558810 | 0.829625 | 4.637044e-55 | -8.615850e-47 |
| Msa0298990 | Msa0558810 | 0.804183 | 2.440854e-49 | -8.615850e-47 |
| Msa0304290 | Msa0558810 | 0.805862 | 1.087379e-49 | -8.615850e-47 |
| Msa0304330 | Msa0558810 | 0.812563 | 3.981482e-51 | -8.615850e-47 |
| Msa0309750 | Msa0558810 | 0.809793 | 1.587141e-50 | -8.615850e-47 |
| Msa0329350 | Msa0558810 | 0.837569 | 4.810019e-57 | -8.615850e-47 |
| Msa0337650 | Msa0558810 | 0.826160 | 3.160147e-54 | -8.615850e-47 |
| Msa0355270 | Msa0558810 | 0.808980 | 2.371928e-50 | -8.615850e-47 |
| Msa0484840 | Msa0558810 | 0.826405 | 2.761915e-54 | -8.615850e-47 |
| Msa0505770 | Msa0558810 | 0.804747 | 1.862582e-49 | -8.615850e-47 |
| Msa0514180 | Msa0558810 | 0.816502 | 5.350695e-52 | -8.615850e-47 |
| Msa0526540 | Msa0558810 | 0.800537 | 1.375523e-48 | -8.615850e-47 |
| Msa0534590 | Msa0558810 | 0.818627 | 1.776095e-52 | -8.615850e-47 |
| Msa0541860 | Msa0558810 | 0.807908 | 4.017437e-50 | -8.615850e-47 |
| Msa0546360 | Msa0558810 | 0.807404 | 5.139679e-50 | -8.615850e-47 |
| Msa0547360 | Msa0558810 | 0.804214 | 2.405431e-49 | -8.615850e-47 |
| Msa0547720 | Msa0558810 | 0.819672 | 1.026928e-52 | -8.615850e-47 |
| Msa0552680 | Msa0558810 | 0.814590 | 1.425610e-51 | -8.615850e-47 |
| Msa0552810 | Msa0558810 | 0.802609 | 5.171990e-49 | -8.615850e-47 |
| Msa0555450 | Msa0558810 | 0.813397 | 2.613620e-51 | -8.615850e-47 |
| Msa0556790 | Msa0558810 | 0.813663 | 2.284466e-51 | -8.615850e-47 |
| Msa0557070 | Msa0558810 | 0.817404 | 3.356414e-52 | -8.615850e-47 |
| Msa0558810 | Msa0558840 | 0.937539 | 2.939354e-98 | -8.615850e-47 |
| Msa0558810 | Msa0562940 | 0.801726 | 7.859395e-49 | -8.615850e-47 |
| Msa0558810 | Msa0568820 | 0.832257 | 1.048121e-55 | -8.615850e-47 |
| Msa0558810 | Msa0589190 | 0.808359 | 3.220132e-50 | -8.615850e-47 |
| Msa0558810 | Msa0590800 | 0.818266 | 2.144239e-52 | -8.615850e-47 |
| Msa0558810 | Msa0592440 | 0.807838 | 4.156230e-50 | -8.615850e-47 |
| Msa0558810 | Msa0600600 | 0.866683 | 2.382793e-65 | -8.615850e-47 |
| Msa0558810 | Msa0603320 | 0.810148 | 1.331279e-50 | -8.615850e-47 |
| Msa0558810 | Msa0615440 | 0.833263 | 5.897849e-56 | -8.615850e-47 |
| Msa0558810 | Msa0619070 | 0.829746 | 4.331593e-55 | -8.615850e-47 |
| Msa0558810 | Msa0623700 | 0.804959 | 1.681564e-49 | -8.615850e-47 |
| Msa0558810 | Msa0631120 | 0.811670 | 6.234544e-51 | -8.615850e-47 |
| Msa0558810 | Msa0638070 | 0.803058 | 4.178044e-49 | -8.615850e-47 |
| Msa0558810 | Msa0641140 | 0.854210 | 1.432596e-61 | -8.615850e-47 |
| Msa0558810 | Msa0656580 | 0.806192 | 9.268394e-50 | -8.615850e-47 |
| Msa0558810 | Msa0657580 | 0.805978 | 1.028291e-49 | -8.615850e-47 |
| Msa0558810 | Msa0663900 | 0.815451 | 9.182900e-52 | -8.615850e-47 |
| Msa0558810 | Msa0669340 | 0.814301 | 1.651992e-51 | -8.615850e-47 |
| Msa0558810 | Msa0679680 | 0.803085 | 4.125476e-49 | -8.615850e-47 |
| Msa0558810 | Msa0682900 | 0.813537 | 2.434018e-51 | -8.615850e-47 |
| Msa0558810 | Msa0684500 | 0.810849 | 9.395679e-51 | -8.615850e-47 |
| Msa0558810 | Msa0687630 | 0.812994 | 3.204206e-51 | -8.615850e-47 |
| Msa0558810 | Msa0689260 | 0.831298 | 1.807204e-55 | -8.615850e-47 |
| Msa0558810 | Msa0691900 | 0.860830 | 1.571194e-63 | -8.615850e-47 |
| Msa0558810 | Msa0692840 | 0.804537 | 2.059845e-49 | -8.615850e-47 |
| Msa0558810 | Msa0694840 | 0.819811 | 9.548269e-53 | -8.615850e-47 |
| Msa0558810 | Msa0696130 | 0.831076 | 2.048337e-55 | -8.615850e-47 |
| Msa0558810 | Msa0698060 | 0.839518 | 1.510587e-57 | -8.615850e-47 |
| Msa0558810 | Msa0698490 | 0.833647 | 4.729898e-56 | -8.615850e-47 |
| Msa0558810 | Msa0698660 | 0.838019 | 3.687662e-57 | -8.615850e-47 |
| Msa0558810 | Msa0700860 | 0.855731 | 5.180014e-62 | -8.615850e-47 |
| Msa0558810 | Msa0700920 | 0.861970 | 7.056424e-64 | -8.615850e-47 |
| Msa0558810 | Msa0703230 | 0.810384 | 1.184012e-50 | -8.615850e-47 |
| Msa0558810 | Msa0708520 | 0.805573 | 1.250600e-49 | -8.615850e-47 |
| Msa0558810 | Msa0708610 | 0.819798 | 9.611887e-53 | -8.615850e-47 |
| Msa0558810 | Msa0709500 | 0.858156 | 9.995841e-63 | -8.615850e-47 |
| Msa0558810 | Msa0711780 | 0.809113 | 2.221486e-50 | -8.615850e-47 |
| Msa0558810 | Msa0715650 | 0.820878 | 5.433612e-53 | -8.615850e-47 |
| Msa0558810 | Msa0720820 | 0.803454 | 3.458992e-49 | -8.615850e-47 |
| Msa0558810 | Msa0722020 | 0.810051 | 1.396998e-50 | -8.615850e-47 |
| Msa0558810 | Msa0749760 | 0.814762 | 1.305931e-51 | -8.615850e-47 |
| Msa0558810 | Msa0750430 | 0.803101 | 4.093936e-49 | -8.615850e-47 |
| Msa0558810 | Msa0750880 | 0.841885 | 3.621149e-58 | -8.615850e-47 |
| Msa0558810 | Msa0761940 | 0.834815 | 2.410006e-56 | -8.615850e-47 |
| Msa0558810 | Msa0772480 | 0.813289 | 2.759280e-51 | -8.615850e-47 |
| Msa0558810 | Msa0783790 | 0.825857 | 3.729272e-54 | -8.615850e-47 |
| Msa0558810 | Msa0790660 | -0.826578 | 2.512303e-54 | -8.615850e-47 |
| Msa0558810 | Msa0790850 | 0.856780 | 2.551818e-62 | -8.615850e-47 |
| Msa0558810 | Msa0794670 | 0.814313 | 1.642005e-51 | -8.615850e-47 |
| Msa0558810 | Msa0796530 | 0.821382 | 4.159725e-53 | -8.615850e-47 |
| Msa0558810 | Msa0798440 | 0.824052 | 9.947580e-54 | -8.615850e-47 |
| Msa0558810 | Msa0802410 | 0.806068 | 9.842805e-50 | -8.615850e-47 |
| Msa0558810 | Msa0808270 | 0.819982 | 8.725751e-53 | -8.615850e-47 |
| Msa0558810 | Msa0819060 | 0.811379 | 7.210293e-51 | -8.615850e-47 |
| Msa0558810 | Msa0827280 | 0.803837 | 2.881479e-49 | -8.615850e-47 |
| Msa0558810 | Msa0830540 | 0.820965 | 5.189451e-53 | -8.615850e-47 |
| Msa0558810 | Msa0831870 | 0.804911 | 1.720759e-49 | -8.615850e-47 |
| Msa0558810 | Msa0841940 | 0.810075 | 1.380248e-50 | -8.615850e-47 |
| Msa0558810 | Msa0842830 | 0.811248 | 7.698219e-51 | -8.615850e-47 |
| Msa0558810 | Msa0849200 | 0.829061 | 6.355879e-55 | -8.615850e-47 |
| Msa0558810 | Msa0850710 | 0.801308 | 9.572658e-49 | -8.615850e-47 |
| Msa0558810 | Msa0859180 | 0.815459 | 9.147931e-52 | -8.615850e-47 |
| Msa0558810 | Msa0876200 | 0.834043 | 3.765021e-56 | -8.615850e-47 |
| Msa0558810 | Msa0897080 | 0.817220 | 3.692030e-52 | -8.615850e-47 |
| Msa0558810 | Msa0902760 | 0.851449 | 8.812650e-61 | -8.615850e-47 |
| Msa0558810 | Msa0926460 | 0.802909 | 4.484999e-49 | -8.615850e-47 |
| Msa0558810 | Msa0933310 | 0.805366 | 1.382115e-49 | -8.615850e-47 |
| Msa0558810 | Msa0968590 | 0.847258 | 1.295642e-59 | -8.615850e-47 |
| Msa0558810 | Msa0970030 | 0.858724 | 6.767890e-63 | -8.615850e-47 |
| Msa0558810 | Msa0971090 | 0.800466 | 1.422238e-48 | -8.615850e-47 |
| Msa0558810 | Msa0989540 | 0.834371 | 3.116037e-56 | -8.615850e-47 |
| Msa0558810 | Msa1006840 | 0.863215 | 2.918176e-64 | -8.615850e-47 |
| Msa0558810 | Msa1013400 | 0.852322 | 4.981838e-61 | -8.615850e-47 |
| Msa0558810 | Msa1014420 | 0.849016 | 4.237762e-60 | -8.615850e-47 |
| Msa0558810 | Msa1019240 | 0.810509 | 1.112789e-50 | -8.615850e-47 |
| Msa0558810 | Msa1019260 | 0.812718 | 3.681386e-51 | -8.615850e-47 |
| Msa0558810 | Msa1024750 | 0.806800 | 6.897618e-50 | -8.615850e-47 |
| Msa0558810 | Msa1040400 | 0.840115 | 1.055779e-57 | -8.615850e-47 |
| Msa0558810 | Msa1040890 | 0.809529 | 1.809189e-50 | -8.615850e-47 |
| Msa0558810 | Msa1041210 | 0.805159 | 1.527372e-49 | -8.615850e-47 |
| Msa0558810 | Msa1041520 | 0.811985 | 5.322023e-51 | -8.615850e-47 |
| Msa0558810 | Msa1055410 | 0.871540 | 6.323184e-67 | -8.615850e-47 |
| Msa0558810 | Msa1063510 | 0.815442 | 9.227876e-52 | -8.615850e-47 |
| Msa0558810 | Msa1077030 | 0.809805 | 1.578114e-50 | -8.615850e-47 |
| Msa0558810 | Msa1081150 | 0.849794 | 2.572696e-60 | -8.615850e-47 |
| Msa0558810 | Msa1081560 | 0.836339 | 9.915885e-57 | -8.615850e-47 |
| Msa0558810 | Msa1083150 | 0.813411 | 2.594720e-51 | -8.615850e-47 |
| Msa0558810 | Msa1084470 | 0.813284 | 2.767090e-51 | -8.615850e-47 |
| Msa0558810 | Msa1089840 | 0.813841 | 2.087034e-51 | -8.615850e-47 |
| Msa0558810 | Msa1093330 | 0.818636 | 1.767498e-52 | -8.615850e-47 |
| Msa0558810 | Msa1093530 | 0.849544 | 3.020679e-60 | -8.615850e-47 |
| Msa0558810 | Msa1093840 | 0.802387 | 5.748301e-49 | -8.615850e-47 |
| Msa0558810 | Msa1101600 | 0.808404 | 3.148596e-50 | -8.615850e-47 |
| Msa0558810 | Msa1104140 | 0.842869 | 1.987159e-58 | -8.615850e-47 |
| Msa0558810 | Msa1104210 | 0.802404 | 5.702118e-49 | -8.615850e-47 |
| Msa0558810 | Msa1119200 | 0.831642 | 1.486912e-55 | -8.615850e-47 |
| Msa0558810 | Msa1121440 | 0.806210 | 9.186685e-50 | -8.615850e-47 |
| Msa0558810 | Msa1125760 | 0.853681 | 2.034308e-61 | -8.615850e-47 |
| Msa0558810 | Msa1126510 | 0.815622 | 8.412241e-52 | -8.615850e-47 |
| Msa0558810 | Msa1126770 | 0.805361 | 1.385310e-49 | -8.615850e-47 |
| Msa0558810 | Msa1127130 | 0.835630 | 1.500844e-56 | -8.615850e-47 |
| Msa0558810 | Msa1127890 | 0.827101 | 1.884055e-54 | -8.615850e-47 |
| Msa0558810 | Msa1133400 | 0.826555 | 2.543781e-54 | -8.615850e-47 |
| Msa0558810 | Msa1147900 | 0.826992 | 2.001102e-54 | -8.615850e-47 |
| Msa0558810 | Msa1147970 | 0.805542 | 1.269593e-49 | -8.615850e-47 |
| Msa0558810 | Msa1160590 | 0.812672 | 3.768121e-51 | -8.615850e-47 |
| Msa0558810 | Msa1165870 | 0.833881 | 4.134168e-56 | -8.615850e-47 |
| Msa0558810 | Msa1165940 | 0.804012 | 2.649876e-49 | -8.615850e-47 |
| Msa0558810 | Msa1166410 | 0.831122 | 1.996168e-55 | -8.615850e-47 |
| Msa0558810 | Msa1166860 | 0.800612 | 1.327965e-48 | -8.615850e-47 |
| Msa0558810 | Msa1171360 | 0.856163 | 3.873570e-62 | -8.615850e-47 |
| Msa0558810 | Msa1174100 | 0.820409 | 6.963566e-53 | -8.615850e-47 |
| Msa0558810 | Msa1179950 | 0.816692 | 4.851470e-52 | -8.615850e-47 |
| Msa0558810 | Msa1179980 | 0.805154 | 1.530899e-49 | -8.615850e-47 |
| Msa0558810 | Msa1187840 | 0.835378 | 1.737929e-56 | -8.615850e-47 |
| Msa0558810 | Msa1194030 | 0.808784 | 2.612044e-50 | -8.615850e-47 |
| Msa0558810 | Msa1201650 | 0.808841 | 2.539878e-50 | -8.615850e-47 |
| Msa0558810 | Msa1204250 | 0.818265 | 2.145002e-52 | -8.615850e-47 |
| Msa0558810 | Msa1207270 | 0.857039 | 2.140349e-62 | -8.615850e-47 |
| Msa0558810 | Msa1214890 | 0.823648 | 1.236711e-53 | -8.615850e-47 |
| Msa0558810 | Msa1217860 | 0.803081 | 4.133079e-49 | -8.615850e-47 |
| Msa0558810 | Msa1217940 | 0.812030 | 5.203368e-51 | -8.615850e-47 |
| Msa0558810 | Msa1218600 | 0.876541 | 1.287007e-68 | -8.615850e-47 |
| Msa0558810 | Msa1237940 | 0.852285 | 5.102356e-61 | -8.615850e-47 |
| Msa0558810 | Msa1249240 | 0.824750 | 6.816690e-54 | -8.615850e-47 |
| Msa0558810 | Msa1254510 | 0.806492 | 8.012942e-50 | -8.615850e-47 |
| Msa0558810 | Msa1254610 | 0.800596 | 1.338236e-48 | -8.615850e-47 |
| Msa0558810 | Msa1254710 | 0.825977 | 3.492532e-54 | -8.615850e-47 |
| Msa0558810 | Msa1255040 | -0.831751 | 1.397713e-55 | -8.615850e-47 |
| Msa0558810 | Msa1257510 | 0.836419 | 9.464408e-57 | -8.615850e-47 |
| Msa0558810 | Msa1265630 | 0.858059 | 1.068339e-62 | -8.615850e-47 |
| Msa0558810 | Msa1269300 | 0.814437 | 1.541214e-51 | -8.615850e-47 |
| Msa0558810 | Msa1270620 | 0.801164 | 1.024468e-48 | -8.615850e-47 |
| Msa0558810 | Msa1270690 | 0.804138 | 2.493974e-49 | -8.615850e-47 |
| Msa0558810 | Msa1281190 | 0.808106 | 3.644304e-50 | -8.615850e-47 |
| Msa0558810 | Msa1283170 | 0.821443 | 4.026086e-53 | -8.615850e-47 |
| Msa0558810 | Msa1295110 | 0.812902 | 3.355039e-51 | -8.615850e-47 |
| Msa0558810 | Msa1303250 | 0.802150 | 6.430230e-49 | -8.615850e-47 |
| Msa0558810 | Msa1305710 | 0.801871 | 7.336886e-49 | -8.615850e-47 |
| Msa0558810 | Msa1306990 | 0.806934 | 6.462021e-50 | -8.615850e-47 |
| Msa0558810 | Msa1307950 | 0.800672 | 1.291170e-48 | -8.615850e-47 |
| Msa0558810 | Msa1316780 | 0.823892 | 1.084180e-53 | -8.615850e-47 |
| Msa0558810 | Msa1316830 | 0.839412 | 1.609605e-57 | -8.615850e-47 |
| Msa0558810 | Msa1331910 | 0.813235 | 2.836597e-51 | -8.615850e-47 |
| Msa0558810 | Msa1331920 | 0.801238 | 9.895109e-49 | -8.615850e-47 |
| Msa0558810 | Msa1333110 | 0.815679 | 8.171357e-52 | -8.615850e-47 |
| Msa0558810 | Msa1353060 | 0.842504 | 2.483745e-58 | -8.615850e-47 |
| Msa0558810 | Msa1355700 | 0.835924 | 1.263990e-56 | -8.615850e-47 |
| Msa0558810 | Msa1356440 | 0.866676 | 2.395204e-65 | -8.615850e-47 |
| Msa0558810 | Msa1358250 | 0.834993 | 2.173708e-56 | -8.615850e-47 |
| Msa0558810 | Msa1360140 | 0.812124 | 4.963761e-51 | -8.615850e-47 |
| Msa0558810 | Msa1363330 | 0.802687 | 4.984218e-49 | -8.615850e-47 |
| Msa0558810 | Msa1365150 | 0.816193 | 6.272817e-52 | -8.615850e-47 |
| Msa0558810 | Msa1366600 | 0.808451 | 3.077889e-50 | -8.615850e-47 |
| Msa0558810 | Msa1367880 | 0.821630 | 3.644686e-53 | -8.615850e-47 |
| Msa0558810 | Msa1368060 | 0.801436 | 9.014137e-49 | -8.615850e-47 |
| Msa0558810 | Msa1371640 | 0.824089 | 9.751218e-54 | -8.615850e-47 |
| Msa0558810 | Msa1374120 | 0.826899 | 2.105617e-54 | -8.615850e-47 |
| Msa0558810 | Msa1376200 | 0.835043 | 2.110484e-56 | -8.615850e-47 |
| Msa0558810 | Msa1379760 | 0.801467 | 8.881196e-49 | -8.615850e-47 |
| Msa0558810 | Msa1385670 | 0.806895 | 6.587012e-50 | -8.615850e-47 |
| Msa0558810 | Msa1386600 | 0.802981 | 4.333608e-49 | -8.615850e-47 |
| Msa0558810 | Msa1387420 | 0.813575 | 2.388087e-51 | -8.615850e-47 |
| Msa0558810 | Msa1392780 | 0.818210 | 2.207377e-52 | -8.615850e-47 |
| Msa0558810 | Msa1394290 | 0.866160 | 3.493075e-65 | -8.615850e-47 |
| Msa0558810 | Msa1394500 | 0.801961 | 7.032129e-49 | -8.615850e-47 |
| Msa0558810 | Msa1397810 | 0.802269 | 6.078465e-49 | -8.615850e-47 |
| Msa0558810 | Msa1403580 | -0.805892 | 1.071911e-49 | -8.615850e-47 |
| Msa0558810 | Msa1404190 | 0.815781 | 7.754471e-52 | -8.615850e-47 |
| Msa0558810 | Msa1416390 | 0.814318 | 1.638014e-51 | -8.615850e-47 |
| Msa0558810 | Msa1419870 | 0.807274 | 5.477082e-50 | -8.615850e-47 |
| Msa0558810 | Msa1423350 | 0.809013 | 2.334132e-50 | -8.615850e-47 |
| Msa0558810 | Msa1426030 | 0.805772 | 1.136157e-49 | -8.615850e-47 |
| Msa0558810 | Msa1432700 | 0.837826 | 4.132232e-57 | -8.615850e-47 |
| Msa0558810 | Msa1439960 | 0.810963 | 8.875482e-51 | -8.615850e-47 |
| Msa0558810 | Msa1440000 | 0.804918 | 1.715394e-49 | -8.615850e-47 |
| Msa0558810 | Msa1444310 | 0.857584 | 1.477552e-62 | -8.615850e-47 |
| Msa0558810 | Msa1450280 | 0.809488 | 1.845580e-50 | -8.615850e-47 |
| Msa0558810 | Msa1457920 | 0.863060 | 3.260095e-64 | -8.615850e-47 |
| Msa0558810 | Msa1461280 | 0.826299 | 2.927275e-54 | -8.615850e-47 |
| Msa0558810 | Msa1466300 | 0.817605 | 3.023284e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0558810 | MtrunA17_Chr8g0378681 | 68.563 | 334 | 19 | 3 | 1 | 248 | 1 | 334 | 1.16e-149 | 420 |
| Msa0558810 | MtrunA17_Chr4g0025631 | 64.983 | 297 | 48 | 5 | 2 | 248 | 87 | 377 | 3.75e-121 | 350 |
| Msa0558810 | MtrunA17_Chr4g0025631 | 65.217 | 69 | 17 | 2 | 1 | 63 | 1 | 68 | 1.33e-14 | 72.4 |
| Msa0558810 | MtrunA17_Chr1g0197131 | 81.955 | 133 | 24 | 0 | 116 | 248 | 1 | 133 | 3.46e-75 | 224 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0558810 | AT5G38720.1 | 65.101 | 149 | 51 | 1 | 101 | 248 | 158 | 306 | 9.41e-70 | 217 |
| Msa0558810 | AT5G38720.3 | 65.101 | 149 | 51 | 1 | 101 | 248 | 165 | 313 | 1.18e-69 | 217 |
| Msa0558810 | AT5G38720.2 | 65.101 | 149 | 51 | 1 | 101 | 248 | 177 | 325 | 6.24e-69 | 215 |
Find 55 sgRNAs with CRISPR-Local
Find 329 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGTTAGTAAAGGAGAAAA+AGG | 0.308720 | 4_1:+57819434 | Msa0558810:CDS |
| AGCTGCTGCAGAAAATAAAT+TGG | 0.319112 | 4_1:+57822871 | Msa0558810:CDS |
| GCAATCAACATCATTTAATA+AGG | 0.321323 | 4_1:-57823640 | None:intergenic |
| GACATTCATATTATTTCCTC+TGG | 0.367904 | 4_1:+57820392 | Msa0558810:CDS |
| GCGTTCCTTATGCCCATCAT+TGG | 0.384093 | 4_1:+57823836 | Msa0558810:three_prime_UTR |
| CCAACCCTGGTCTACTTTGA+TGG | 0.384521 | 4_1:-57820885 | None:intergenic |
| AAGAAAAGAACCTGCGACCT+TGG | 0.413836 | 4_1:-57823665 | None:intergenic |
| TCCACCTGCGTTTAGCGGCC+AGG | 0.422775 | 4_1:-57819168 | None:intergenic |
| GGAGATGATGACTGCTCAAA+TGG | 0.443319 | 4_1:+57820413 | Msa0558810:CDS |
| AAAAGAGAAGCTCAGAGAAA+TGG | 0.446445 | 4_1:+57822941 | Msa0558810:CDS |
| AAAGAGAGAACAAAATCATC+AGG | 0.460936 | 4_1:+57820367 | Msa0558810:CDS |
| TCCTTTACTAACTTTCATCA+TGG | 0.465522 | 4_1:-57819426 | None:intergenic |
| TCCATCCTCCTTCTGCAGCA+AGG | 0.468377 | 4_1:-57822772 | None:intergenic |
| AGGTTAACGCAATCCAATGA+TGG | 0.468471 | 4_1:-57823849 | None:intergenic |
| CATGTCAAGATGAACAATAA+TGG | 0.472762 | 4_1:+57819521 | Msa0558810:CDS |
| AAGTGGGATTGCTGTGGGCT+CGG | 0.474663 | 4_1:+57822841 | Msa0558810:CDS |
| GAGTTTCCACCTGCGTTTAG+CGG | 0.483197 | 4_1:-57819173 | None:intergenic |
| GTAAATGAACAAAATTTGTC+AGG | 0.484474 | 4_1:-57823738 | None:intergenic |
| GCAATCCAATGATGGGCATA+AGG | 0.492331 | 4_1:-57823841 | None:intergenic |
| CCATCCTCCTTCTGCAGCAA+GGG | 0.496362 | 4_1:-57822771 | None:intergenic |
| TTGATTGCAGCCAAGGTCGC+AGG | 0.505768 | 4_1:+57823655 | Msa0558810:three_prime_UTR |
| CGCTGAAAGTGGGATTGCTG+TGG | 0.507910 | 4_1:+57822835 | Msa0558810:CDS |
| CTCAGATACCTTGAGAAATG+AGG | 0.517485 | 4_1:-57819218 | None:intergenic |
| GCCATGATGAAAGTTAGTAA+AGG | 0.525855 | 4_1:+57819425 | Msa0558810:exon |
| AAAACTACTGACGCTGAAAG+TGG | 0.530432 | 4_1:+57822824 | Msa0558810:CDS |
| AATGATGTTGATTGCAGCCA+AGG | 0.532209 | 4_1:+57823648 | Msa0558810:exon |
| CCATCAAAGTAGACCAGGGT+TGG | 0.532437 | 4_1:+57820885 | Msa0558810:CDS |
| TGTTGCAAAACCTCCAACCC+TGG | 0.543861 | 4_1:-57820898 | None:intergenic |
| TTTCGCTCCCTCATTTCTCA+AGG | 0.544907 | 4_1:+57819210 | Msa0558810:five_prime_UTR |
| CCCTTGCTGCAGAAGGAGGA+TGG | 0.545811 | 4_1:+57822771 | Msa0558810:CDS |
| GGAACTGCAGAGCAAATTTG+AGG | 0.547063 | 4_1:+57823570 | Msa0558810:CDS |
| TCAAACCACAGAGTGGATCA+TGG | 0.547910 | 4_1:+57820858 | Msa0558810:intron |
| TCAAAGTAGACCAGGGTTGG+AGG | 0.548210 | 4_1:+57820888 | Msa0558810:CDS |
| AAAGAAGCCCTTGCTGCAGA+AGG | 0.553866 | 4_1:+57822764 | Msa0558810:CDS |
| GTTGATTTAGAAGTGCAAAA+CGG | 0.556656 | 4_1:+57819711 | Msa0558810:CDS |
| TGCTGCAGAAGGAGGATGGA+CGG | 0.572937 | 4_1:+57822775 | Msa0558810:CDS |
| GAAGCCCTTGCTGCAGAAGG+AGG | 0.575071 | 4_1:+57822767 | Msa0558810:CDS |
| TGCGTTAACCTATGTTATTG+TGG | 0.579699 | 4_1:+57823861 | Msa0558810:three_prime_UTR |
| AAACTACTGACGCTGAAAGT+GGG | 0.579773 | 4_1:+57822825 | Msa0558810:CDS |
| GGTTAACGCAATCCAATGAT+GGG | 0.580909 | 4_1:-57823848 | None:intergenic |
| GCTGAAAGTGGGATTGCTGT+GGG | 0.581833 | 4_1:+57822836 | Msa0558810:CDS |
| GAATACCATCAAAGTAGACC+AGG | 0.581962 | 4_1:+57820880 | Msa0558810:CDS |
| TGATACATCCACAATAACAT+AGG | 0.582790 | 4_1:-57823869 | None:intergenic |
| TCAGATACCTTGAGAAATGA+GGG | 0.584663 | 4_1:-57819217 | None:intergenic |
| ACCTGGCCGCTAAACGCAGG+TGG | 0.586936 | 4_1:+57819167 | Msa0558810:five_prime_UTR |
| AGAACCTGGCCGCTAAACGC+AGG | 0.596545 | 4_1:+57819164 | Msa0558810:five_prime_UTR |
| GACGGTGGTTCAGCACCACA+AGG | 0.611340 | 4_1:+57822793 | Msa0558810:CDS |
| TGGTTCAGCACCACAAGGGT+AGG | 0.619462 | 4_1:+57822798 | Msa0558810:CDS |
| TGCAACAGTTGAGAGCTGCT+AGG | 0.650823 | 4_1:+57823608 | Msa0558810:CDS |
| TGAGCAGTCATCATCTCCAG+AGG | 0.681253 | 4_1:-57820408 | None:intergenic |
| ACTGCAGAGCAAATTTGAGG+AGG | 0.684181 | 4_1:+57823573 | Msa0558810:CDS |
| AGAGTTTATATCTACTTACG+AGG | 0.689415 | 4_1:+57820930 | Msa0558810:CDS |
| TGCAGAAGGAGGATGGACGG+TGG | 0.709610 | 4_1:+57822778 | Msa0558810:CDS |
| AATACCATCAAAGTAGACCA+GGG | 0.721380 | 4_1:+57820881 | Msa0558810:CDS |
| ACGGTGGTTCAGCACCACAA+GGG | 0.735362 | 4_1:+57822794 | Msa0558810:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATATTTATTGTTATACA+TGG | + | chr4_1:57820773-57820792 | Msa0558810:intron | 10.0% |
| !! | TCAATTTATAATAAAATTCA+TGG | - | chr4_1:57821110-57821129 | None:intergenic | 10.0% |
| !!! | TTTTAGTTTAAGAAATATTA+GGG | + | chr4_1:57823192-57823211 | Msa0558810:intron | 10.0% |
| !!! | AATGATTTTTTTTGTAATGT+CGG | + | chr4_1:57820516-57820535 | Msa0558810:intron | 15.0% |
| !! | TTAAATATACAATAGCATAT+GGG | - | chr4_1:57820757-57820776 | None:intergenic | 15.0% |
| !! | ATTAAATATACAATAGCATA+TGG | - | chr4_1:57820758-57820777 | None:intergenic | 15.0% |
| !!! | TAAAGGAAATTAATTTTGAA+AGG | - | chr4_1:57822398-57822417 | None:intergenic | 15.0% |
| !!! | CTTTTAGTTTAAGAAATATT+AGG | + | chr4_1:57823191-57823210 | Msa0558810:intron | 15.0% |
| !!! | ACAAATATTTTTGACAAAAT+TGG | - | chr4_1:57823768-57823787 | None:intergenic | 15.0% |
| !!! | GATTTTTTCATTATATTCTT+TGG | + | chr4_1:57823939-57823958 | Msa0558810:three_prime_UTR | 15.0% |
| !! | TTAAGCAAATATACATGTTA+TGG | - | chr4_1:57819259-57819278 | None:intergenic | 20.0% |
| !! | ATAGTTTACCCTAAATTATA+AGG | + | chr4_1:57819282-57819301 | Msa0558810:intron | 20.0% |
| !! | TAACTACACCTTATAATTTA+GGG | - | chr4_1:57819293-57819312 | None:intergenic | 20.0% |
| !! | TTAACTACACCTTATAATTT+AGG | - | chr4_1:57819294-57819313 | None:intergenic | 20.0% |
| !!! | TAGTTAAATTGCAAATTTTG+AGG | + | chr4_1:57819307-57819326 | Msa0558810:intron | 20.0% |
| !!! | AGTTAAATTGCAAATTTTGA+GGG | + | chr4_1:57819308-57819327 | Msa0558810:intron | 20.0% |
| !!! | AAATGTGTTATGTTTTTGTA+CGG | + | chr4_1:57819798-57819817 | Msa0558810:intron | 20.0% |
| !! | TTTGCTTAAGTAGAAATATT+TGG | - | chr4_1:57821036-57821055 | None:intergenic | 20.0% |
| !!! | TTGTATAATTACTAGTTCTA+TGG | + | chr4_1:57821171-57821190 | Msa0558810:intron | 20.0% |
| !!! | ACTTTACATGTTATTTTTCA+AGG | - | chr4_1:57821197-57821216 | None:intergenic | 20.0% |
| !!! | TAAAGTTATTTTCCTTCATA+AGG | + | chr4_1:57821211-57821230 | Msa0558810:intron | 20.0% |
| !! | ATAATTCAGTTTGTATTTGT+AGG | + | chr4_1:57821481-57821500 | Msa0558810:intron | 20.0% |
| !! | TAATTCAGTTTGTATTTGTA+GGG | + | chr4_1:57821482-57821501 | Msa0558810:intron | 20.0% |
| !!! | TTTTTGATGTTGATGTTTTT+TGG | + | chr4_1:57821625-57821644 | Msa0558810:intron | 20.0% |
| !!! | GTATTTTATGAGTAAGAATA+GGG | + | chr4_1:57821746-57821765 | Msa0558810:intron | 20.0% |
| !! | TCATAACTGAATATTGAATA+AGG | - | chr4_1:57822673-57822692 | None:intergenic | 20.0% |
| !!! | TAAATTTAAACGAACAGTTT+TGG | + | chr4_1:57823072-57823091 | Msa0558810:intron | 20.0% |
| !!! | AACAGTTTTGGTTTAAATAA+TGG | + | chr4_1:57823084-57823103 | Msa0558810:intron | 20.0% |
| !!! | AATAATGGAAGATGTTAATT+AGG | + | chr4_1:57823099-57823118 | Msa0558810:intron | 20.0% |
| !!! | ATAATGGAAGATGTTAATTA+GGG | + | chr4_1:57823100-57823119 | Msa0558810:intron | 20.0% |
| !! | TTAAGAAATATTAGGGTTAT+TGG | + | chr4_1:57823199-57823218 | Msa0558810:intron | 20.0% |
| !!! | AAATTATATGATTTTATGCG+AGG | + | chr4_1:57823411-57823430 | Msa0558810:intron | 20.0% |
| !!! | TATTTTTGACAAAATTGGAA+TGG | - | chr4_1:57823763-57823782 | None:intergenic | 20.0% |
| !!! | AATTTGAGTTATATTTTGCT+GGG | + | chr4_1:57823810-57823829 | Msa0558810:three_prime_UTR | 20.0% |
| !!! | AAATTTTGAGGGATCAAATT+GGG | + | chr4_1:57819319-57819338 | Msa0558810:intron | 25.0% |
| !!! | ATATGTATGTTTTGATTCAC+AGG | + | chr4_1:57819392-57819411 | Msa0558810:intron | 25.0% |
| ! | AAAGTTAGTAAAGGAGAAAA+AGG | + | chr4_1:57819434-57819453 | Msa0558810:CDS | 25.0% |
| !!! | AATGTGTTATGTTTTTGTAC+GGG | + | chr4_1:57819799-57819818 | Msa0558810:intron | 25.0% |
| ! | GAACTTCAACTGAAATAAAT+TGG | + | chr4_1:57819834-57819853 | Msa0558810:intron | 25.0% |
| !! | AAATAAATTGGTTGTTTCAG+TGG | + | chr4_1:57819846-57819865 | Msa0558810:intron | 25.0% |
| ! | AACAAGGACAAAAATTTAGT+TGG | + | chr4_1:57819930-57819949 | Msa0558810:intron | 25.0% |
| !! | ACTAATCATGTTCATGATTT+TGG | + | chr4_1:57820046-57820065 | Msa0558810:intron | 25.0% |
| ! | TCTGATATATTGAGGAAAAA+AGG | - | chr4_1:57820098-57820117 | None:intergenic | 25.0% |
| !! | TTTTTCCTCAATATATCAGA+TGG | + | chr4_1:57820098-57820117 | Msa0558810:intron | 25.0% |
| !!! | AGAAAGTGCTTTTTATTACA+AGG | - | chr4_1:57820210-57820229 | None:intergenic | 25.0% |
| !!! | TTGTAATAAAAAGCACTTTC+TGG | + | chr4_1:57820209-57820228 | Msa0558810:intron | 25.0% |
| !! | ATACAAGTTTCTTTGTTTGT+AGG | + | chr4_1:57820290-57820309 | Msa0558810:intron | 25.0% |
| ! | AGCTAAGAAAAAAAGAAGAA+AGG | + | chr4_1:57820325-57820344 | Msa0558810:CDS | 25.0% |
| ! | TAAGAAAAAAAGAAGAAAGG+AGG | + | chr4_1:57820328-57820347 | Msa0558810:CDS | 25.0% |
| !!! | TGCATTATTTAGTTTTTGAC+TGG | + | chr4_1:57820828-57820847 | Msa0558810:intron | 25.0% |
| !!! | GCATTATTTAGTTTTTGACT+GGG | + | chr4_1:57820829-57820848 | Msa0558810:intron | 25.0% |
| !!! | CATTATTTAGTTTTTGACTG+GGG | + | chr4_1:57820830-57820849 | Msa0558810:intron | 25.0% |
| ! | CATAGGCAAAATAAATAACT+TGG | - | chr4_1:57821263-57821282 | None:intergenic | 25.0% |
| !! | GTTACTGATTATGTTGTATA+AGG | + | chr4_1:57821338-57821357 | Msa0558810:intron | 25.0% |
| !! | AAAGTTTTTCTGTTGCTAAT+GGG | + | chr4_1:57821417-57821436 | Msa0558810:intron | 25.0% |
| ! | GAGAGTAATTGATAGAAATA+TGG | + | chr4_1:57821724-57821743 | Msa0558810:intron | 25.0% |
| !! | GGTATTTTATGAGTAAGAAT+AGG | + | chr4_1:57821745-57821764 | Msa0558810:intron | 25.0% |
| ! | AGAATAATGCAAAATCATGA+AGG | + | chr4_1:57821790-57821809 | Msa0558810:intron | 25.0% |
| !! | AAATACAAGGAGAACATTTT+GGG | - | chr4_1:57821929-57821948 | None:intergenic | 25.0% |
| !! | TAATGTTTTCAGCAAATACA+AGG | - | chr4_1:57821942-57821961 | None:intergenic | 25.0% |
| !! | ATATTTGTGTGTTTTTCTCT+TGG | + | chr4_1:57822124-57822143 | Msa0558810:intron | 25.0% |
| ! | CAAAATTAATTTCCTTTAGC+AGG | + | chr4_1:57822400-57822419 | Msa0558810:intron | 25.0% |
| ! | TGGATACTGAATATTGAATA+TGG | - | chr4_1:57822535-57822554 | None:intergenic | 25.0% |
| ! | TTGAGATGAGAGATTATAAA+GGG | - | chr4_1:57822595-57822614 | None:intergenic | 25.0% |
| !! | TTTGAGATGAGAGATTATAA+AGG | - | chr4_1:57822596-57822615 | None:intergenic | 25.0% |
| !! | ATTAATAAGCCGTTTAGTTT+GGG | - | chr4_1:57822620-57822639 | None:intergenic | 25.0% |
| !!! | GTTTCCATGCAATTATTTTT+CGG | + | chr4_1:57822720-57822739 | Msa0558810:intron | 25.0% |
| ! | TCATCTACGATATGAATATA+TGG | - | chr4_1:57822993-57823012 | None:intergenic | 25.0% |
| ! | TAATGGAAGATGTTAATTAG+GGG | + | chr4_1:57823101-57823120 | Msa0558810:intron | 25.0% |
| ! | TCATAGAAACCAAGATATTA+GGG | - | chr4_1:57823284-57823303 | None:intergenic | 25.0% |
| ! | ATCATAGAAACCAAGATATT+AGG | - | chr4_1:57823285-57823304 | None:intergenic | 25.0% |
| !! | TTTTGTGAATCTTAACTTAC+TGG | - | chr4_1:57823322-57823341 | None:intergenic | 25.0% |
| ! | GCAATCAACATCATTTAATA+AGG | - | chr4_1:57823643-57823662 | None:intergenic | 25.0% |
| ! | GTAAATGAACAAAATTTGTC+AGG | - | chr4_1:57823741-57823760 | None:intergenic | 25.0% |
| !!! | CAATTTGAGTTATATTTTGC+TGG | + | chr4_1:57823809-57823828 | Msa0558810:three_prime_UTR | 25.0% |
| !! | CATTATCATATCTTTTTCCT+CGG | + | chr4_1:57823890-57823909 | Msa0558810:three_prime_UTR | 25.0% |
| !! | CAAATTTTGAGGGATCAAAT+TGG | + | chr4_1:57819318-57819337 | Msa0558810:intron | 30.0% |
| TCCTTTACTAACTTTCATCA+TGG | - | chr4_1:57819429-57819448 | None:intergenic | 30.0% | |
| ! | AATCTTTTTCTTCTTTTCCC+CGG | - | chr4_1:57819468-57819487 | None:intergenic | 30.0% |
| CATGTCAAGATGAACAATAA+TGG | + | chr4_1:57819521-57819540 | Msa0558810:CDS | 30.0% | |
| !! | GCACATTCTCTGAAATAAAT+TGG | + | chr4_1:57819575-57819594 | Msa0558810:intron | 30.0% |
| AAATTGGTTGTTTGTTTCAG+TGG | + | chr4_1:57819591-57819610 | Msa0558810:intron | 30.0% | |
| ! | TCATAGAATGCAGCTTTTAA+AGG | + | chr4_1:57819615-57819634 | Msa0558810:intron | 30.0% |
| ! | CATAGAATGCAGCTTTTAAA+GGG | + | chr4_1:57819616-57819635 | Msa0558810:intron | 30.0% |
| !!! | TTCTTTCTTTTTCGGCTAAT+AGG | - | chr4_1:57819657-57819676 | None:intergenic | 30.0% |
| ! | TGTCCTTGTTCTTTCTTTTT+CGG | - | chr4_1:57819665-57819684 | None:intergenic | 30.0% |
| ! | GTTGATTTAGAAGTGCAAAA+CGG | + | chr4_1:57819711-57819730 | Msa0558810:CDS | 30.0% |
| TCCTGAAATGGAGATTATAA+AGG | + | chr4_1:57819870-57819889 | Msa0558810:intron | 30.0% | |
| CCTGAAATGGAGATTATAAA+GGG | + | chr4_1:57819871-57819890 | Msa0558810:intron | 30.0% | |
| TGGAGATTATAAAGGGAAAA+AGG | + | chr4_1:57819878-57819897 | Msa0558810:intron | 30.0% | |
| TAGTCGAAAAAGGAAAAACA+AGG | + | chr4_1:57819914-57819933 | Msa0558810:intron | 30.0% | |
| ! | GTTGATTTAGAAGAGCAAAA+TGG | + | chr4_1:57819977-57819996 | Msa0558810:intron | 30.0% |
| ! | ACATTGCGATTCTAAAGAAA+AGG | + | chr4_1:57820130-57820149 | Msa0558810:intron | 30.0% |
| GAAAATGAATGTATGACTTC+AGG | - | chr4_1:57820267-57820286 | None:intergenic | 30.0% | |
| CAAACAAAGAAACTTGTATG+AGG | - | chr4_1:57820289-57820308 | None:intergenic | 30.0% | |
| ! | TCTCTCTTTTCTGATGATTT+TGG | - | chr4_1:57820356-57820375 | None:intergenic | 30.0% |
| AAAGAGAGAACAAAATCATC+AGG | + | chr4_1:57820367-57820386 | Msa0558810:CDS | 30.0% | |
| GACATTCATATTATTTCCTC+TGG | + | chr4_1:57820392-57820411 | Msa0558810:CDS | 30.0% | |
| AATTACTGTATGTATATGCG+TGG | - | chr4_1:57820585-57820604 | None:intergenic | 30.0% | |
| AGAGTTTATATCTACTTACG+AGG | + | chr4_1:57820930-57820949 | Msa0558810:CDS | 30.0% | |
| ATCTACTTACGAGGAAAAAT+TGG | + | chr4_1:57820939-57820958 | Msa0558810:CDS | 30.0% | |
| TCTTCCTTAAAGCAAAATAG+AGG | + | chr4_1:57820984-57821003 | Msa0558810:intron | 30.0% | |
| !! | AGTTATTTTCCTTCATAAGG+AGG | + | chr4_1:57821214-57821233 | Msa0558810:intron | 30.0% |
| !! | GTTATTTTCCTTCATAAGGA+GGG | + | chr4_1:57821215-57821234 | Msa0558810:intron | 30.0% |
| ! | TAAGGTATTTAACGATGCTT+TGG | + | chr4_1:57821356-57821375 | Msa0558810:intron | 30.0% |
| ! | CAAAGTTTTTCTGTTGCTAA+TGG | + | chr4_1:57821416-57821435 | Msa0558810:intron | 30.0% |
| ! | AAGTTTTTCTGTTGCTAATG+GGG | + | chr4_1:57821418-57821437 | Msa0558810:intron | 30.0% |
| AACTTCTAATACTGTGTCTA+TGG | - | chr4_1:57821546-57821565 | None:intergenic | 30.0% | |
| TATTCAAATTATACGCATGC+AGG | - | chr4_1:57821587-57821606 | None:intergenic | 30.0% | |
| !!! | ATGTTGATGTTTTTTGGCTT+AGG | + | chr4_1:57821631-57821650 | Msa0558810:intron | 30.0% |
| GCATAAAAAGTGACTTTATC+TGG | + | chr4_1:57821656-57821675 | Msa0558810:intron | 30.0% | |
| ATCAATTACTCTCTTTCTTG+AGG | - | chr4_1:57821717-57821736 | None:intergenic | 30.0% | |
| TCAGGATTTCTGAATTAGTT+AGG | - | chr4_1:57821873-57821892 | None:intergenic | 30.0% | |
| ! | AATACAAGGAGAACATTTTG+GGG | - | chr4_1:57821928-57821947 | None:intergenic | 30.0% |
| ! | CAAATACAAGGAGAACATTT+TGG | - | chr4_1:57821930-57821949 | None:intergenic | 30.0% |
| !!! | AGCTAGCTAAATAGTTTTAG+AGG | + | chr4_1:57822061-57822080 | Msa0558810:intron | 30.0% |
| !!! | TAGCTAAATAGTTTTAGAGG+TGG | + | chr4_1:57822064-57822083 | Msa0558810:intron | 30.0% |
| !! | AGAAAGGTGTTAGAACTTTA+GGG | - | chr4_1:57822355-57822374 | None:intergenic | 30.0% |
| AGTTAGTAAGTCTGTTAGTT+TGG | - | chr4_1:57822483-57822502 | None:intergenic | 30.0% | |
| !! | ATTATAAAGGGCATTGTTGT+GGG | - | chr4_1:57822583-57822602 | None:intergenic | 30.0% |
| !! | TTAATAAGCCGTTTAGTTTG+GGG | - | chr4_1:57822619-57822638 | None:intergenic | 30.0% |
| GATTAATAAGCCGTTTAGTT+TGG | - | chr4_1:57822621-57822640 | None:intergenic | 30.0% | |
| AACACTTAAGTATCACAAAG+TGG | - | chr4_1:57822643-57822662 | None:intergenic | 30.0% | |
| CCAAAATAAGTAACAGATGT+GGG | - | chr4_1:57822701-57822720 | None:intergenic | 30.0% | |
| ACCAAAATAAGTAACAGATG+TGG | - | chr4_1:57822702-57822721 | None:intergenic | 30.0% | |
| TTGACCGAAAAATAATTGCA+TGG | - | chr4_1:57822727-57822746 | None:intergenic | 30.0% | |
| !! | AATTATTTTTCGGTCAATGC+AGG | + | chr4_1:57822730-57822749 | Msa0558810:intron | 30.0% |
| !! | AACTCCTGTTTGTTTCTTTT+TGG | - | chr4_1:57822897-57822916 | None:intergenic | 30.0% |
| AAAAAGAAACAAACAGGAGT+TGG | + | chr4_1:57822896-57822915 | Msa0558810:CDS | 30.0% | |
| AATGGAAGATGTTAATTAGG+GGG | + | chr4_1:57823102-57823121 | Msa0558810:intron | 30.0% | |
| ! | CATGCTAATGCAAATTTTGA+TGG | - | chr4_1:57823138-57823157 | None:intergenic | 30.0% |
| ATGATCGTTATCTTGTTGAT+TGG | + | chr4_1:57823378-57823397 | Msa0558810:intron | 30.0% | |
| TGATACATCCACAATAACAT+AGG | - | chr4_1:57823872-57823891 | None:intergenic | 30.0% | |
| TCAGATACCTTGAGAAATGA+GGG | - | chr4_1:57819220-57819239 | None:intergenic | 35.0% | |
| GCCATGATGAAAGTTAGTAA+AGG | + | chr4_1:57819425-57819444 | Msa0558810:exon | 35.0% | |
| ! | GTAAAGGAGAAAAAGGCATA+CGG | + | chr4_1:57819441-57819460 | Msa0558810:CDS | 35.0% |
| TTTATTTCAGAGAATGTGCG+AGG | - | chr4_1:57819574-57819593 | None:intergenic | 35.0% | |
| TAGCCGAAAAAGAAAGAACA+AGG | + | chr4_1:57819659-57819678 | Msa0558810:CDS | 35.0% | |
| CCCTTTATAATCTCCATTTC+AGG | - | chr4_1:57819874-57819893 | None:intergenic | 35.0% | |
| AAGCTACTACTAGTCGAAAA+AGG | + | chr4_1:57819904-57819923 | Msa0558810:intron | 35.0% | |
| !! | AAATGGTGAGTTGATGGTTA+CGG | + | chr4_1:57819994-57820013 | Msa0558810:intron | 35.0% |
| CTACTCCATCTGATATATTG+AGG | - | chr4_1:57820106-57820125 | None:intergenic | 35.0% | |
| CAATATATCAGATGGAGTAG+TGG | + | chr4_1:57820106-57820125 | Msa0558810:intron | 35.0% | |
| ! | TTGCGATTCTAAAGAAAAGG+AGG | + | chr4_1:57820133-57820152 | Msa0558810:intron | 35.0% |
| TCTAAAGAAAAGGAGGTTCA+AGG | + | chr4_1:57820140-57820159 | Msa0558810:intron | 35.0% | |
| ATTAGAATCTCTACGCTTCT+TGG | - | chr4_1:57820169-57820188 | None:intergenic | 35.0% | |
| AATACCATCAAAGTAGACCA+GGG | + | chr4_1:57820881-57820900 | Msa0558810:CDS | 35.0% | |
| TTACGAGGAAAAATTGGAAG+AGG | + | chr4_1:57820945-57820964 | Msa0558810:CDS | 35.0% | |
| ! | CCAACCTCTATTTTGCTTTA+AGG | - | chr4_1:57820991-57821010 | None:intergenic | 35.0% |
| CCTTAAAGCAAAATAGAGGT+TGG | + | chr4_1:57820988-57821007 | Msa0558810:intron | 35.0% | |
| AGGGTTATCTGACTATAATC+AGG | - | chr4_1:57821065-57821084 | None:intergenic | 35.0% | |
| ! | TCAGATAACCCTTTTATCAG+TGG | + | chr4_1:57821073-57821092 | Msa0558810:intron | 35.0% |
| ! | CAGATAACCCTTTTATCAGT+GGG | + | chr4_1:57821074-57821093 | Msa0558810:intron | 35.0% |
| ! | AGATAACCCTTTTATCAGTG+GGG | + | chr4_1:57821075-57821094 | Msa0558810:intron | 35.0% |
| CATTATCCCCACTGATAAAA+GGG | - | chr4_1:57821084-57821103 | None:intergenic | 35.0% | |
| TCATTATCCCCACTGATAAA+AGG | - | chr4_1:57821085-57821104 | None:intergenic | 35.0% | |
| !! | TTGGTGCTAAATATGCTGTT+AGG | + | chr4_1:57821449-57821468 | Msa0558810:intron | 35.0% |
| CTAAATATGCTGTTAGGATG+TGG | + | chr4_1:57821455-57821474 | Msa0558810:intron | 35.0% | |
| ! | TCAACATCAAAAAGCACGTA+AGG | - | chr4_1:57821618-57821637 | None:intergenic | 35.0% |
| CATTATTCTTCTGCAATCAG+GGG | - | chr4_1:57821779-57821798 | None:intergenic | 35.0% | |
| GCATTATTCTTCTGCAATCA+GGG | - | chr4_1:57821780-57821799 | None:intergenic | 35.0% | |
| TGCATTATTCTTCTGCAATC+AGG | - | chr4_1:57821781-57821800 | None:intergenic | 35.0% | |
| TGAGATAGTTGGAAGAAACA+TGG | - | chr4_1:57821840-57821859 | None:intergenic | 35.0% | |
| ACTATTGTTAGATGTCCATC+AGG | - | chr4_1:57821904-57821923 | None:intergenic | 35.0% | |
| ! | ATACAAGGAGAACATTTTGG+GGG | - | chr4_1:57821927-57821946 | None:intergenic | 35.0% |
| GGTAATCATGTATCACAGAT+TGG | - | chr4_1:57821978-57821997 | None:intergenic | 35.0% | |
| ATACAGATGAGAGCCAATAA+TGG | + | chr4_1:57822001-57822020 | Msa0558810:intron | 35.0% | |
| ! | ATTTCTTTAGAGACATCCAC+GGG | - | chr4_1:57822100-57822119 | None:intergenic | 35.0% |
| ! | GATTTCTTTAGAGACATCCA+CGG | - | chr4_1:57822101-57822120 | None:intergenic | 35.0% |
| GAGTGAACTCATAGATAACT+TGG | + | chr4_1:57822185-57822204 | Msa0558810:intron | 35.0% | |
| ! | GCTCATTAAAGTACCCATTT+CGG | - | chr4_1:57822256-57822275 | None:intergenic | 35.0% |
| AGCCATGGAACAAACAAAAA+GGG | + | chr4_1:57822273-57822292 | Msa0558810:intron | 35.0% | |
| !! | TTCCCTTTTTGTTTGTTCCA+TGG | - | chr4_1:57822278-57822297 | None:intergenic | 35.0% |
| GTATGCAAAATGAAGCTTGA+AGG | - | chr4_1:57822325-57822344 | None:intergenic | 35.0% | |
| !! | GAGAAAGGTGTTAGAACTTT+AGG | - | chr4_1:57822356-57822375 | None:intergenic | 35.0% |
| ACCTTTCTCTTCCTTAAGTT+GGG | + | chr4_1:57822367-57822386 | Msa0558810:intron | 35.0% | |
| GTGAGATGAGAGATTATGAA+GGG | - | chr4_1:57822457-57822476 | None:intergenic | 35.0% | |
| TGTGAGATGAGAGATTATGA+AGG | - | chr4_1:57822458-57822477 | None:intergenic | 35.0% | |
| TCAATATTCAGTATCCAAGC+AGG | + | chr4_1:57822538-57822557 | Msa0558810:intron | 35.0% | |
| !! | GATTATAAAGGGCATTGTTG+TGG | - | chr4_1:57822584-57822603 | None:intergenic | 35.0% |
| ATCTCAAACCCCAAACTAAA+CGG | + | chr4_1:57822608-57822627 | Msa0558810:intron | 35.0% | |
| !! | CCCACATCTGTTACTTATTT+TGG | + | chr4_1:57822698-57822717 | Msa0558810:intron | 35.0% |
| AGCTGCTGCAGAAAATAAAT+TGG | + | chr4_1:57822871-57822890 | Msa0558810:CDS | 35.0% | |
| TTGGCCAAAAAGAAACAAAC+AGG | + | chr4_1:57822890-57822909 | Msa0558810:CDS | 35.0% | |
| !!! | GAGCTTCTCTTTTTTGAAAG+CGG | - | chr4_1:57822934-57822953 | None:intergenic | 35.0% |
| AAAAGAGAAGCTCAGAGAAA+TGG | + | chr4_1:57822941-57822960 | Msa0558810:CDS | 35.0% | |
| ATGGAAGATGTTAATTAGGG+GGG | + | chr4_1:57823103-57823122 | Msa0558810:intron | 35.0% | |
| GAGAAACATCACAGAAGATA+AGG | - | chr4_1:57823257-57823276 | None:intergenic | 35.0% | |
| TTCTCACTTCCCTAATATCT+TGG | + | chr4_1:57823272-57823291 | Msa0558810:intron | 35.0% | |
| ATCTTAACTTACTGGCAGAA+GGG | - | chr4_1:57823314-57823333 | None:intergenic | 35.0% | |
| AATCTTAACTTACTGGCAGA+AGG | - | chr4_1:57823315-57823334 | None:intergenic | 35.0% | |
| TGCGTTAACCTATGTTATTG+TGG | + | chr4_1:57823861-57823880 | Msa0558810:three_prime_UTR | 35.0% | |
| ACATGACAAAAAGATAACCG+AGG | - | chr4_1:57823910-57823929 | None:intergenic | 35.0% | |
| CTCAGATACCTTGAGAAATG+AGG | - | chr4_1:57819221-57819240 | None:intergenic | 40.0% | |
| CTTGTACACAGTATATACGC+AGG | - | chr4_1:57819754-57819773 | None:intergenic | 40.0% | |
| TGTTTCAGTGGATCCTGAAA+TGG | + | chr4_1:57819858-57819877 | Msa0558810:intron | 40.0% | |
| AAATCAACTTCTCCGTCTTC+TGG | - | chr4_1:57819965-57819984 | None:intergenic | 40.0% | |
| ! | AGAGCAAAATGGTGAGTTGA+TGG | + | chr4_1:57819988-57820007 | Msa0558810:intron | 40.0% |
| !! | AATGGTGAGTTGATGGTTAC+GGG | + | chr4_1:57819995-57820014 | Msa0558810:intron | 40.0% |
| GCGTGGCAACTATTGTAAAT+TGG | - | chr4_1:57820568-57820587 | None:intergenic | 40.0% | |
| ATGTCTACATGCTCACTGAT+AGG | - | chr4_1:57820685-57820704 | None:intergenic | 40.0% | |
| ! | TCTTTCAACCTGTTGACTAC+TGG | + | chr4_1:57820720-57820739 | Msa0558810:intron | 40.0% |
| GAATACCATCAAAGTAGACC+AGG | + | chr4_1:57820880-57820899 | Msa0558810:CDS | 40.0% | |
| TCTCACTCTATGACTAGCAT+AGG | - | chr4_1:57821280-57821299 | None:intergenic | 40.0% | |
| ATGCTAGTCATAGAGTGAGA+AGG | + | chr4_1:57821280-57821299 | Msa0558810:intron | 40.0% | |
| TGCTAATGGGGTATGTTAGT+TGG | + | chr4_1:57821430-57821449 | Msa0558810:intron | 40.0% | |
| AATATGCTGTTAGGATGTGG+AGG | + | chr4_1:57821458-57821477 | Msa0558810:intron | 40.0% | |
| TGGAAGAAACATGGCATGTT+GGG | - | chr4_1:57821831-57821850 | None:intergenic | 40.0% | |
| TTGGAAGAAACATGGCATGT+TGG | - | chr4_1:57821832-57821851 | None:intergenic | 40.0% | |
| GTTAGTTGAGCTGAGATAGT+TGG | - | chr4_1:57821851-57821870 | None:intergenic | 40.0% | |
| CTGAAAACATTATTCCGCCA+AGG | + | chr4_1:57821950-57821969 | Msa0558810:intron | 40.0% | |
| TGTATCACAGATTGGAACCT+TGG | - | chr4_1:57821970-57821989 | None:intergenic | 40.0% | |
| ! | ATTGGCTCTCATCTGTATCT+TGG | - | chr4_1:57821999-57822018 | None:intergenic | 40.0% |
| TTGACCATGACATCCGAAAT+GGG | + | chr4_1:57822240-57822259 | Msa0558810:intron | 40.0% | |
| ATGGGTACTTTAATGAGCCA+TGG | + | chr4_1:57822258-57822277 | Msa0558810:intron | 40.0% | |
| GAGCCATGGAACAAACAAAA+AGG | + | chr4_1:57822272-57822291 | Msa0558810:intron | 40.0% | |
| AGGAGGAATAGGTCTGTATT+GGG | - | chr4_1:57822305-57822324 | None:intergenic | 40.0% | |
| AAGGAGGAATAGGTCTGTAT+TGG | - | chr4_1:57822306-57822325 | None:intergenic | 40.0% | |
| ATGAAGCTTGAAGGAGGAAT+AGG | - | chr4_1:57822316-57822335 | None:intergenic | 40.0% | |
| TGCAAAATGAAGCTTGAAGG+AGG | - | chr4_1:57822322-57822341 | None:intergenic | 40.0% | |
| CACCTTTCTCTTCCTTAAGT+TGG | + | chr4_1:57822366-57822385 | Msa0558810:intron | 40.0% | |
| ATTTCCTTTAGCAGGACGAA+TGG | + | chr4_1:57822408-57822427 | Msa0558810:intron | 40.0% | |
| !! | ATTATGAAGGGCATTGTCGT+GGG | - | chr4_1:57822445-57822464 | None:intergenic | 40.0% |
| ! | TAGTTTTCTTCCTACCCTTG+TGG | - | chr4_1:57822811-57822830 | None:intergenic | 40.0% |
| AAAACTACTGACGCTGAAAG+TGG | + | chr4_1:57822824-57822843 | Msa0558810:CDS | 40.0% | |
| AAACTACTGACGCTGAAAGT+GGG | + | chr4_1:57822825-57822844 | Msa0558810:CDS | 40.0% | |
| AAGATGTTAATTAGGGGGGT+TGG | + | chr4_1:57823107-57823126 | Msa0558810:intron | 40.0% | |
| AGATGTTAATTAGGGGGGTT+GGG | + | chr4_1:57823108-57823127 | Msa0558810:intron | 40.0% | |
| GCTGTGTTAGTCATATAAGC+AGG | + | chr4_1:57823223-57823242 | Msa0558810:intron | 40.0% | |
| ! | TGATTTAAGACAGCGTCTAG+GGG | - | chr4_1:57823475-57823494 | None:intergenic | 40.0% |
| ! | CTGATTTAAGACAGCGTCTA+GGG | - | chr4_1:57823476-57823495 | None:intergenic | 40.0% |
| ! | TGTTTTGCTTGCAGAGCTAA+TGG | + | chr4_1:57823549-57823568 | Msa0558810:intron | 40.0% |
| ! | AATGATGTTGATTGCAGCCA+AGG | + | chr4_1:57823648-57823667 | Msa0558810:exon | 40.0% |
| ! | TGAGTTATATTTTGCTGGGC+TGG | + | chr4_1:57823814-57823833 | Msa0558810:three_prime_UTR | 40.0% |
| GGTTAACGCAATCCAATGAT+GGG | - | chr4_1:57823851-57823870 | None:intergenic | 40.0% | |
| AGGTTAACGCAATCCAATGA+TGG | - | chr4_1:57823852-57823871 | None:intergenic | 40.0% | |
| TTTCGCTCCCTCATTTCTCA+AGG | + | chr4_1:57819210-57819229 | Msa0558810:five_prime_UTR | 45.0% | |
| GAGGGATCAAATTGGGAGTT+AGG | + | chr4_1:57819326-57819345 | Msa0558810:intron | 45.0% | |
| TGGAAGACAACACCAGAAGA+CGG | + | chr4_1:57819950-57819969 | Msa0558810:intron | 45.0% | |
| GGAGATGATGACTGCTCAAA+TGG | + | chr4_1:57820413-57820432 | Msa0558810:CDS | 45.0% | |
| ATGCTCACTGATAGGCAGTA+GGG | - | chr4_1:57820677-57820696 | None:intergenic | 45.0% | |
| ! | ACCTGTTGACTACTGGAATG+TGG | + | chr4_1:57820727-57820746 | Msa0558810:intron | 45.0% |
| ACCACATTCCAGTAGTCAAC+AGG | - | chr4_1:57820731-57820750 | None:intergenic | 45.0% | |
| GGAATACTCAAACCACAGAG+TGG | + | chr4_1:57820851-57820870 | Msa0558810:intron | 45.0% | |
| TCAAACCACAGAGTGGATCA+TGG | + | chr4_1:57820858-57820877 | Msa0558810:intron | 45.0% | |
| GTATTCCATGATCCACTCTG+TGG | - | chr4_1:57820866-57820885 | None:intergenic | 45.0% | |
| TTCCTTCATAAGGAGGGCTA+AGG | + | chr4_1:57821221-57821240 | Msa0558810:intron | 45.0% | |
| TCCTTCATAAGGAGGGCTAA+GGG | + | chr4_1:57821222-57821241 | Msa0558810:intron | 45.0% | |
| AGCATCAAGTGCTAAGCACA+TGG | - | chr4_1:57821384-57821403 | None:intergenic | 45.0% | |
| GAAACATGGCATGTTGGGTA+AGG | - | chr4_1:57821826-57821845 | None:intergenic | 45.0% | |
| TAGATGTCCATCAGGACTGT+TGG | - | chr4_1:57821896-57821915 | None:intergenic | 45.0% | |
| ATCACAGATTGGAACCTTGG+CGG | - | chr4_1:57821967-57821986 | None:intergenic | 45.0% | |
| TTGTGAGCAATGAAGGTCTG+TGG | - | chr4_1:57822037-57822056 | None:intergenic | 45.0% | |
| GCTATCGTTGTGAGCAATGA+AGG | - | chr4_1:57822044-57822063 | None:intergenic | 45.0% | |
| CATTTCGGATGTCATGGTCA+AGG | - | chr4_1:57822241-57822260 | None:intergenic | 45.0% | |
| CTTGACCATGACATCCGAAA+TGG | + | chr4_1:57822239-57822258 | Msa0558810:intron | 45.0% | |
| AGTACCCATTTCGGATGTCA+TGG | - | chr4_1:57822247-57822266 | None:intergenic | 45.0% | |
| GCCCAACTTAAGGAAGAGAA+AGG | - | chr4_1:57822371-57822390 | None:intergenic | 45.0% | |
| GAAAGGTGAAGCCCAACTTA+AGG | - | chr4_1:57822381-57822400 | None:intergenic | 45.0% | |
| !! | GATTATGAAGGGCATTGTCG+TGG | - | chr4_1:57822446-57822465 | None:intergenic | 45.0% |
| !! | CATTGTTGTGGGAGAGTACT+AGG | - | chr4_1:57822572-57822591 | None:intergenic | 45.0% |
| GATGTTAATTAGGGGGGTTG+GGG | + | chr4_1:57823109-57823128 | Msa0558810:intron | 45.0% | |
| ATGTTAATTAGGGGGGTTGG+GGG | + | chr4_1:57823110-57823129 | Msa0558810:intron | 45.0% | |
| CGAGGCTCATTCATGCTTTA+CGG | + | chr4_1:57823429-57823448 | Msa0558810:intron | 45.0% | |
| ! | GCTGATTTAAGACAGCGTCT+AGG | - | chr4_1:57823477-57823496 | None:intergenic | 45.0% |
| GGAACTGCAGAGCAAATTTG+AGG | + | chr4_1:57823570-57823589 | Msa0558810:CDS | 45.0% | |
| ACTGCAGAGCAAATTTGAGG+AGG | + | chr4_1:57823573-57823592 | Msa0558810:CDS | 45.0% | |
| AAGAAAAGAACCTGCGACCT+TGG | - | chr4_1:57823668-57823687 | None:intergenic | 45.0% | |
| ! | AAGGTCGCAGGTTCTTTTCT+TGG | + | chr4_1:57823667-57823686 | Msa0558810:three_prime_UTR | 45.0% |
| ! | AGGTCGCAGGTTCTTTTCTT+GGG | + | chr4_1:57823668-57823687 | Msa0558810:three_prime_UTR | 45.0% |
| !! | GCAATCCAATGATGGGCATA+AGG | - | chr4_1:57823844-57823863 | None:intergenic | 45.0% |
| !!! | ATAAAATCATATAATTTTTA+AGG | - | chr4_1:57823408-57823427 | None:intergenic | 5.0% |
| GAGTTTCCACCTGCGTTTAG+CGG | - | chr4_1:57819176-57819195 | None:intergenic | 50.0% | |
| ! | GGAGAAAAAGGCATACGGAC+CGG | + | chr4_1:57819446-57819465 | Msa0558810:CDS | 50.0% |
| ! | GAGAAAAAGGCATACGGACC+GGG | + | chr4_1:57819447-57819466 | Msa0558810:CDS | 50.0% |
| ! | AGAAAAAGGCATACGGACCG+GGG | + | chr4_1:57819448-57819467 | Msa0558810:CDS | 50.0% |
| !! | TGAGTTGATGGTTACGGGTG+TGG | + | chr4_1:57820000-57820019 | Msa0558810:intron | 50.0% |
| TGAGCAGTCATCATCTCCAG+AGG | - | chr4_1:57820411-57820430 | None:intergenic | 50.0% | |
| AGTAGGGTGGATGTTGGCAA+AGG | - | chr4_1:57820661-57820680 | None:intergenic | 50.0% | |
| ATAGGCAGTAGGGTGGATGT+TGG | - | chr4_1:57820667-57820686 | None:intergenic | 50.0% | |
| CATGCTCACTGATAGGCAGT+AGG | - | chr4_1:57820678-57820697 | None:intergenic | 50.0% | |
| CCAACCCTGGTCTACTTTGA+TGG | - | chr4_1:57820888-57820907 | None:intergenic | 50.0% | |
| CCATCAAAGTAGACCAGGGT+TGG | + | chr4_1:57820885-57820904 | Msa0558810:CDS | 50.0% | |
| TCAAAGTAGACCAGGGTTGG+AGG | + | chr4_1:57820888-57820907 | Msa0558810:CDS | 50.0% | |
| TGTTGCAAAACCTCCAACCC+TGG | - | chr4_1:57820901-57820920 | None:intergenic | 50.0% | |
| GAGTGAGAAGGCAGCTATTG+AGG | + | chr4_1:57821292-57821311 | Msa0558810:intron | 50.0% | |
| ACATGGCATGTTGGGTAAGG+AGG | - | chr4_1:57821823-57821842 | None:intergenic | 50.0% | |
| ATCCTGACCAACAGTCCTGA+TGG | + | chr4_1:57821886-57821905 | Msa0558810:intron | 50.0% | |
| TGAGAGCCAATAATGGCCTC+TGG | + | chr4_1:57822008-57822027 | Msa0558810:intron | 50.0% | |
| GAGAGCCAATAATGGCCTCT+GGG | + | chr4_1:57822009-57822028 | Msa0558810:intron | 50.0% | |
| AGAGCCAATAATGGCCTCTG+GGG | + | chr4_1:57822010-57822029 | Msa0558810:intron | 50.0% | |
| ! | AGGTGGCTTCTATTTTCCCG+TGG | + | chr4_1:57822081-57822100 | Msa0558810:intron | 50.0% |
| GTGGCACATGTTTCAGCAAG+AGG | + | chr4_1:57822160-57822179 | Msa0558810:intron | 50.0% | |
| TAGGCCATTCGTCCTGCTAA+AGG | - | chr4_1:57822415-57822434 | None:intergenic | 50.0% | |
| !! | CATTGTCGTGGGAGAGTACT+AGG | - | chr4_1:57822434-57822453 | None:intergenic | 50.0% |
| ACTAGGTCTTTCGTCCTGCT+TGG | - | chr4_1:57822555-57822574 | None:intergenic | 50.0% | |
| AAAGAAGCCCTTGCTGCAGA+AGG | + | chr4_1:57822764-57822783 | Msa0558810:CDS | 50.0% | |
| GCTGAAAGTGGGATTGCTGT+GGG | + | chr4_1:57822836-57822855 | Msa0558810:CDS | 50.0% | |
| TCTAGGGGTGAGGGAAAATG+GGG | - | chr4_1:57823460-57823479 | None:intergenic | 50.0% | |
| GTCTAGGGGTGAGGGAAAAT+GGG | - | chr4_1:57823461-57823480 | None:intergenic | 50.0% | |
| TGCAACAGTTGAGAGCTGCT+AGG | + | chr4_1:57823608-57823627 | Msa0558810:CDS | 50.0% | |
| ! | GGTCGCAGGTTCTTTTCTTG+GGG | + | chr4_1:57823669-57823688 | Msa0558810:three_prime_UTR | 50.0% |
| ! | GTCGCAGGTTCTTTTCTTGG+GGG | + | chr4_1:57823670-57823689 | Msa0558810:three_prime_UTR | 50.0% |
| ! | AGGTTCTTTTCTTGGGGGAG+CGG | + | chr4_1:57823675-57823694 | Msa0558810:three_prime_UTR | 50.0% |
| GCGTTCCTTATGCCCATCAT+TGG | + | chr4_1:57823836-57823855 | Msa0558810:three_prime_UTR | 50.0% | |
| CTCACTGATAGGCAGTAGGG+TGG | - | chr4_1:57820674-57820693 | None:intergenic | 55.0% | |
| GCCCTTAGCCCTCCTTATGA+AGG | - | chr4_1:57821226-57821245 | None:intergenic | 55.0% | |
| GTCCATCAGGACTGTTGGTC+AGG | - | chr4_1:57821891-57821910 | None:intergenic | 55.0% | |
| TGGACCCCAGAGGCCATTAT+TGG | - | chr4_1:57822017-57822036 | None:intergenic | 55.0% | |
| TCTTGGTCATTGCTGCAGCG+TGG | + | chr4_1:57822141-57822160 | Msa0558810:intron | 55.0% | |
| CCATCCTCCTTCTGCAGCAA+GGG | - | chr4_1:57822774-57822793 | None:intergenic | 55.0% | |
| TCCATCCTCCTTCTGCAGCA+AGG | - | chr4_1:57822775-57822794 | None:intergenic | 55.0% | |
| TGCTGCAGAAGGAGGATGGA+CGG | + | chr4_1:57822775-57822794 | Msa0558810:CDS | 55.0% | |
| ACGGTGGTTCAGCACCACAA+GGG | + | chr4_1:57822794-57822813 | Msa0558810:CDS | 55.0% | |
| TGGTTCAGCACCACAAGGGT+AGG | + | chr4_1:57822798-57822817 | Msa0558810:CDS | 55.0% | |
| CGCTGAAAGTGGGATTGCTG+TGG | + | chr4_1:57822835-57822854 | Msa0558810:CDS | 55.0% | |
| AAGTGGGATTGCTGTGGGCT+CGG | + | chr4_1:57822841-57822860 | Msa0558810:CDS | 55.0% | |
| CGTCTAGGGGTGAGGGAAAA+TGG | - | chr4_1:57823462-57823481 | None:intergenic | 55.0% | |
| AAGACAGCGTCTAGGGGTGA+GGG | - | chr4_1:57823469-57823488 | None:intergenic | 55.0% | |
| TAAGACAGCGTCTAGGGGTG+AGG | - | chr4_1:57823470-57823489 | None:intergenic | 55.0% | |
| TTGATTGCAGCCAAGGTCGC+AGG | + | chr4_1:57823655-57823674 | Msa0558810:three_prime_UTR | 55.0% | |
| AGAACCTGGCCGCTAAACGC+AGG | + | chr4_1:57819164-57819183 | Msa0558810:five_prime_UTR | 60.0% | |
| TGAAGGTCTGTGGACCCCAG+AGG | - | chr4_1:57822027-57822046 | None:intergenic | 60.0% | |
| GAAGCCCTTGCTGCAGAAGG+AGG | + | chr4_1:57822767-57822786 | Msa0558810:CDS | 60.0% | |
| CCCTTGCTGCAGAAGGAGGA+TGG | + | chr4_1:57822771-57822790 | Msa0558810:CDS | 60.0% | |
| TGCAGAAGGAGGATGGACGG+TGG | + | chr4_1:57822778-57822797 | Msa0558810:CDS | 60.0% | |
| GACGGTGGTTCAGCACCACA+AGG | + | chr4_1:57822793-57822812 | Msa0558810:CDS | 60.0% | |
| ACCTGGCCGCTAAACGCAGG+TGG | + | chr4_1:57819167-57819186 | Msa0558810:five_prime_UTR | 65.0% | |
| TCCACCTGCGTTTAGCGGCC+AGG | - | chr4_1:57819171-57819190 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 57819163 | 57823967 | 57819163 | ID=Msa0558810;Name=Msa0558810 |
| chr4_1 | mRNA | 57819163 | 57823967 | 57819163 | ID=Msa0558810-mRNA-1;Parent=Msa0558810;Name=Msa0558810-mRNA-1;_AED=0.41;_eAED=0.41;_QI=83|0.66|0.85|1|0.83|0.71|7|319|248 |
| chr4_1 | exon | 57819163 | 57819231 | 57819163 | ID=Msa0558810-mRNA-1:exon:17570;Parent=Msa0558810-mRNA-1 |
| chr4_1 | exon | 57819414 | 57819542 | 57819414 | ID=Msa0558810-mRNA-1:exon:17571;Parent=Msa0558810-mRNA-1 |
| chr4_1 | exon | 57819628 | 57819732 | 57819628 | ID=Msa0558810-mRNA-1:exon:17572;Parent=Msa0558810-mRNA-1 |
| chr4_1 | exon | 57820312 | 57820443 | 57820312 | ID=Msa0558810-mRNA-1:exon:17573;Parent=Msa0558810-mRNA-1 |
| chr4_1 | exon | 57820869 | 57820966 | 57820869 | ID=Msa0558810-mRNA-1:exon:17574;Parent=Msa0558810-mRNA-1 |
| chr4_1 | exon | 57822752 | 57822962 | 57822752 | ID=Msa0558810-mRNA-1:exon:17575;Parent=Msa0558810-mRNA-1 |
| chr4_1 | exon | 57823563 | 57823967 | 57823563 | ID=Msa0558810-mRNA-1:exon:17576;Parent=Msa0558810-mRNA-1 |
| chr4_1 | five_prime_UTR | 57819163 | 57819231 | 57819163 | ID=Msa0558810-mRNA-1:five_prime_utr;Parent=Msa0558810-mRNA-1 |
| chr4_1 | five_prime_UTR | 57819414 | 57819427 | 57819414 | ID=Msa0558810-mRNA-1:five_prime_utr;Parent=Msa0558810-mRNA-1 |
| chr4_1 | CDS | 57819428 | 57819542 | 57819428 | ID=Msa0558810-mRNA-1:cds;Parent=Msa0558810-mRNA-1 |
| chr4_1 | CDS | 57819628 | 57819732 | 57819628 | ID=Msa0558810-mRNA-1:cds;Parent=Msa0558810-mRNA-1 |
| chr4_1 | CDS | 57820312 | 57820443 | 57820312 | ID=Msa0558810-mRNA-1:cds;Parent=Msa0558810-mRNA-1 |
| chr4_1 | CDS | 57820869 | 57820966 | 57820869 | ID=Msa0558810-mRNA-1:cds;Parent=Msa0558810-mRNA-1 |
| chr4_1 | CDS | 57822752 | 57822962 | 57822752 | ID=Msa0558810-mRNA-1:cds;Parent=Msa0558810-mRNA-1 |
| chr4_1 | CDS | 57823563 | 57823648 | 57823563 | ID=Msa0558810-mRNA-1:cds;Parent=Msa0558810-mRNA-1 |
| chr4_1 | three_prime_UTR | 57823649 | 57823967 | 57823649 | ID=Msa0558810-mRNA-1:three_prime_utr;Parent=Msa0558810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
