Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0025740 | sp|Q9LZF1|HIP6_ARATH | 40.050 | 402 | 165 | 12 | 1 | 336 | 1 | 392 | 4.45e-59 | 197 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000550 | Msa0025740 | -0.804573 | 2.024131e-49 | -8.615850e-47 |
| Msa0012040 | Msa0025740 | 0.804676 | 1.926726e-49 | -8.615850e-47 |
| Msa0014800 | Msa0025740 | 0.804084 | 2.560210e-49 | -8.615850e-47 |
| Msa0015300 | Msa0025740 | 0.806627 | 7.504042e-50 | -8.615850e-47 |
| Msa0020410 | Msa0025740 | 0.830036 | 3.681776e-55 | -8.615850e-47 |
| Msa0023090 | Msa0025740 | 0.804157 | 2.471226e-49 | -8.615850e-47 |
| Msa0025730 | Msa0025740 | 0.810036 | 1.407408e-50 | -8.615850e-47 |
| Msa0025740 | Msa0026910 | 0.821132 | 4.751134e-53 | -8.615850e-47 |
| Msa0025740 | Msa0037880 | 0.834133 | 3.574429e-56 | -8.615850e-47 |
| Msa0025740 | Msa0043980 | 0.819188 | 1.324446e-52 | -8.615850e-47 |
| Msa0025740 | Msa0052860 | 0.819473 | 1.140284e-52 | -8.615850e-47 |
| Msa0025740 | Msa0056030 | 0.812361 | 4.406213e-51 | -8.615850e-47 |
| Msa0025740 | Msa0073460 | 0.929734 | 4.539163e-93 | -8.615850e-47 |
| Msa0025740 | Msa0084940 | 0.806886 | 6.614964e-50 | -8.615850e-47 |
| Msa0025740 | Msa0090100 | 0.804845 | 1.776546e-49 | -8.615850e-47 |
| Msa0025740 | Msa0092990 | 0.831518 | 1.594970e-55 | -8.615850e-47 |
| Msa0025740 | Msa0094920 | 0.804491 | 2.105926e-49 | -8.615850e-47 |
| Msa0025740 | Msa0104800 | 0.804073 | 2.573213e-49 | -8.615850e-47 |
| Msa0025740 | Msa0106850 | 0.803766 | 2.981155e-49 | -8.615850e-47 |
| Msa0025740 | Msa0108560 | 0.811169 | 8.008206e-51 | -8.615850e-47 |
| Msa0025740 | Msa0116080 | 0.807455 | 5.012547e-50 | -8.615850e-47 |
| Msa0025740 | Msa0120340 | 0.815819 | 7.603909e-52 | -8.615850e-47 |
| Msa0025740 | Msa0121620 | 0.920837 | 7.709660e-88 | -8.615850e-47 |
| Msa0025740 | Msa0145310 | 0.819488 | 1.131333e-52 | -8.615850e-47 |
| Msa0025740 | Msa0150800 | 0.814407 | 1.565067e-51 | -8.615850e-47 |
| Msa0025740 | Msa0151180 | 0.824365 | 8.397647e-54 | -8.615850e-47 |
| Msa0025740 | Msa0157100 | 0.809202 | 2.125674e-50 | -8.615850e-47 |
| Msa0025740 | Msa0165970 | 0.925229 | 2.432621e-90 | -8.615850e-47 |
| Msa0025740 | Msa0170570 | 0.825134 | 5.531896e-54 | -8.615850e-47 |
| Msa0025740 | Msa0173990 | 0.821829 | 3.278466e-53 | -8.615850e-47 |
| Msa0025740 | Msa0188630 | 0.805462 | 1.319493e-49 | -8.615850e-47 |
| Msa0025740 | Msa0188680 | -0.803432 | 3.496360e-49 | -8.615850e-47 |
| Msa0025740 | Msa0197610 | 0.806412 | 8.331762e-50 | -8.615850e-47 |
| Msa0025740 | Msa0205850 | 0.818093 | 2.346017e-52 | -8.615850e-47 |
| Msa0025740 | Msa0206010 | 0.804754 | 1.855742e-49 | -8.615850e-47 |
| Msa0025740 | Msa0217680 | 0.823458 | 1.370434e-53 | -8.615850e-47 |
| Msa0025740 | Msa0220580 | 0.804769 | 1.842862e-49 | -8.615850e-47 |
| Msa0025740 | Msa0223740 | 0.815704 | 8.066102e-52 | -8.615850e-47 |
| Msa0025740 | Msa0233610 | 0.811089 | 8.333291e-51 | -8.615850e-47 |
| Msa0025740 | Msa0236440 | 0.817292 | 3.556508e-52 | -8.615850e-47 |
| Msa0025740 | Msa0242430 | 0.813817 | 2.112072e-51 | -8.615850e-47 |
| Msa0025740 | Msa0260210 | 0.807676 | 4.499240e-50 | -8.615850e-47 |
| Msa0025740 | Msa0261110 | 0.816512 | 5.321641e-52 | -8.615850e-47 |
| Msa0025740 | Msa0269450 | 0.823546 | 1.306890e-53 | -8.615850e-47 |
| Msa0025740 | Msa0270220 | -0.812937 | 3.297224e-51 | -8.615850e-47 |
| Msa0025740 | Msa0274350 | 0.861459 | 1.011116e-63 | -8.615850e-47 |
| Msa0025740 | Msa0276920 | 0.817016 | 4.102392e-52 | -8.615850e-47 |
| Msa0025740 | Msa0280630 | 0.848622 | 5.451604e-60 | -8.615850e-47 |
| Msa0025740 | Msa0287410 | 0.828980 | 6.647790e-55 | -8.615850e-47 |
| Msa0025740 | Msa0291500 | 0.836961 | 6.885856e-57 | -8.615850e-47 |
| Msa0025740 | Msa0304290 | 0.809708 | 1.655925e-50 | -8.615850e-47 |
| Msa0025740 | Msa0304330 | 0.810484 | 1.126532e-50 | -8.615850e-47 |
| Msa0025740 | Msa0307560 | 0.805318 | 1.414523e-49 | -8.615850e-47 |
| Msa0025740 | Msa0307830 | -0.834703 | 2.570426e-56 | -8.615850e-47 |
| Msa0025740 | Msa0314250 | 0.867927 | 9.537516e-66 | -8.615850e-47 |
| Msa0025740 | Msa0317510 | 0.801337 | 9.444538e-49 | -8.615850e-47 |
| Msa0025740 | Msa0319170 | 0.812148 | 4.904625e-51 | -8.615850e-47 |
| Msa0025740 | Msa0319880 | 0.813210 | 2.873057e-51 | -8.615850e-47 |
| Msa0025740 | Msa0325850 | 0.801990 | 6.937873e-49 | -8.615850e-47 |
| Msa0025740 | Msa0326110 | 0.811451 | 6.954282e-51 | -8.615850e-47 |
| Msa0025740 | Msa0329350 | 0.836214 | 1.066936e-56 | -8.615850e-47 |
| Msa0025740 | Msa0347360 | 0.820622 | 6.222917e-53 | -8.615850e-47 |
| Msa0025740 | Msa0351810 | 0.823636 | 1.245178e-53 | -8.615850e-47 |
| Msa0025740 | Msa0365490 | 0.819761 | 9.801318e-53 | -8.615850e-47 |
| Msa0025740 | Msa0376910 | 0.805609 | 1.229129e-49 | -8.615850e-47 |
| Msa0025740 | Msa0379550 | 0.834138 | 3.563752e-56 | -8.615850e-47 |
| Msa0025740 | Msa0379640 | 0.828313 | 9.636680e-55 | -8.615850e-47 |
| Msa0025740 | Msa0389810 | 0.803786 | 2.951610e-49 | -8.615850e-47 |
| Msa0025740 | Msa0394340 | 0.808221 | 3.444431e-50 | -8.615850e-47 |
| Msa0025740 | Msa0399340 | 0.808449 | 3.080269e-50 | -8.615850e-47 |
| Msa0025740 | Msa0404030 | 0.802675 | 5.012732e-49 | -8.615850e-47 |
| Msa0025740 | Msa0416300 | 0.809094 | 2.242894e-50 | -8.615850e-47 |
| Msa0025740 | Msa0421600 | 0.820768 | 5.759980e-53 | -8.615850e-47 |
| Msa0025740 | Msa0426330 | 0.820507 | 6.613837e-53 | -8.615850e-47 |
| Msa0025740 | Msa0433360 | 0.820974 | 5.164823e-53 | -8.615850e-47 |
| Msa0025740 | Msa0435220 | 0.801408 | 9.133041e-49 | -8.615850e-47 |
| Msa0025740 | Msa0436760 | 0.816783 | 4.627592e-52 | -8.615850e-47 |
| Msa0025740 | Msa0444090 | 0.803214 | 3.879152e-49 | -8.615850e-47 |
| Msa0025740 | Msa0449830 | 0.802171 | 6.368109e-49 | -8.615850e-47 |
| Msa0025740 | Msa0458440 | 0.805207 | 1.492036e-49 | -8.615850e-47 |
| Msa0025740 | Msa0464900 | 0.838721 | 2.430166e-57 | -8.615850e-47 |
| Msa0025740 | Msa0466390 | 0.807012 | 6.220827e-50 | -8.615850e-47 |
| Msa0025740 | Msa0468130 | 0.804560 | 2.036842e-49 | -8.615850e-47 |
| Msa0025740 | Msa0470690 | 0.800745 | 1.247929e-48 | -8.615850e-47 |
| Msa0025740 | Msa0471900 | 0.801177 | 1.018402e-48 | -8.615850e-47 |
| Msa0025740 | Msa0475410 | 0.838733 | 2.413636e-57 | -8.615850e-47 |
| Msa0025740 | Msa0477130 | -0.809654 | 1.700377e-50 | -8.615850e-47 |
| Msa0025740 | Msa0484780 | 0.856947 | 2.279429e-62 | -8.615850e-47 |
| Msa0025740 | Msa0485120 | 0.802586 | 5.228776e-49 | -8.615850e-47 |
| Msa0025740 | Msa0489610 | 0.808746 | 2.661739e-50 | -8.615850e-47 |
| Msa0025740 | Msa0491520 | 0.813822 | 2.107172e-51 | -8.615850e-47 |
| Msa0025740 | Msa0493630 | 0.809988 | 1.441287e-50 | -8.615850e-47 |
| Msa0025740 | Msa0521430 | 0.810063 | 1.388275e-50 | -8.615850e-47 |
| Msa0025740 | Msa0521540 | 0.801224 | 9.961831e-49 | -8.615850e-47 |
| Msa0025740 | Msa0530650 | 0.838737 | 2.407322e-57 | -8.615850e-47 |
| Msa0025740 | Msa0555200 | 0.843559 | 1.300917e-58 | -8.615850e-47 |
| Msa0025740 | Msa0556100 | 0.801098 | 1.057065e-48 | -8.615850e-47 |
| Msa0025740 | Msa0556860 | 0.831017 | 2.118353e-55 | -8.615850e-47 |
| Msa0025740 | Msa0562440 | 0.834398 | 3.067248e-56 | -8.615850e-47 |
| Msa0025740 | Msa0568820 | 0.806858 | 6.704996e-50 | -8.615850e-47 |
| Msa0025740 | Msa0575470 | 0.811946 | 5.429010e-51 | -8.615850e-47 |
| Msa0025740 | Msa0577220 | 0.841106 | 5.808605e-58 | -8.615850e-47 |
| Msa0025740 | Msa0579130 | 0.807256 | 5.522875e-50 | -8.615850e-47 |
| Msa0025740 | Msa0587190 | 0.829217 | 5.824373e-55 | -8.615850e-47 |
| Msa0025740 | Msa0588240 | 0.807530 | 4.831582e-50 | -8.615850e-47 |
| Msa0025740 | Msa0608710 | 0.865811 | 4.502478e-65 | -8.615850e-47 |
| Msa0025740 | Msa0610370 | 0.801819 | 7.521664e-49 | -8.615850e-47 |
| Msa0025740 | Msa0619070 | 0.803952 | 2.726430e-49 | -8.615850e-47 |
| Msa0025740 | Msa0626990 | 0.835106 | 2.034962e-56 | -8.615850e-47 |
| Msa0025740 | Msa0627350 | 0.839649 | 1.396299e-57 | -8.615850e-47 |
| Msa0025740 | Msa0628290 | 0.838519 | 2.741191e-57 | -8.615850e-47 |
| Msa0025740 | Msa0637070 | 0.828354 | 9.420961e-55 | -8.615850e-47 |
| Msa0025740 | Msa0638070 | 0.817521 | 3.158017e-52 | -8.615850e-47 |
| Msa0025740 | Msa0650900 | 0.800339 | 1.509828e-48 | -8.615850e-47 |
| Msa0025740 | Msa0651270 | 0.802869 | 4.572416e-49 | -8.615850e-47 |
| Msa0025740 | Msa0654620 | 0.801861 | 7.374770e-49 | -8.615850e-47 |
| Msa0025740 | Msa0660300 | 0.801819 | 7.521131e-49 | -8.615850e-47 |
| Msa0025740 | Msa0662650 | 0.819720 | 1.001599e-52 | -8.615850e-47 |
| Msa0025740 | Msa0663240 | 0.818560 | 1.839454e-52 | -8.615850e-47 |
| Msa0025740 | Msa0679550 | 0.829514 | 4.933362e-55 | -8.615850e-47 |
| Msa0025740 | Msa0682550 | 0.826305 | 2.918027e-54 | -8.615850e-47 |
| Msa0025740 | Msa0688070 | 0.805573 | 1.250340e-49 | -8.615850e-47 |
| Msa0025740 | Msa0688480 | 0.826499 | 2.623851e-54 | -8.615850e-47 |
| Msa0025740 | Msa0693380 | 0.819828 | 9.462437e-53 | -8.615850e-47 |
| Msa0025740 | Msa0694250 | 0.811901 | 5.551940e-51 | -8.615850e-47 |
| Msa0025740 | Msa0708860 | 0.820368 | 7.118521e-53 | -8.615850e-47 |
| Msa0025740 | Msa0711100 | 0.800493 | 1.404194e-48 | -8.615850e-47 |
| Msa0025740 | Msa0714960 | 0.828129 | 1.067541e-54 | -8.615850e-47 |
| Msa0025740 | Msa0715110 | 0.812062 | 5.122529e-51 | -8.615850e-47 |
| Msa0025740 | Msa0715470 | 0.824195 | 9.207282e-54 | -8.615850e-47 |
| Msa0025740 | Msa0731180 | 0.845337 | 4.326334e-59 | -8.615850e-47 |
| Msa0025740 | Msa0742390 | 0.832089 | 1.153399e-55 | -8.615850e-47 |
| Msa0025740 | Msa0750350 | 0.810059 | 1.391054e-50 | -8.615850e-47 |
| Msa0025740 | Msa0756540 | 0.804068 | 2.578921e-49 | -8.615850e-47 |
| Msa0025740 | Msa0757050 | 0.813064 | 3.091675e-51 | -8.615850e-47 |
| Msa0025740 | Msa0757080 | 0.807576 | 4.724061e-50 | -8.615850e-47 |
| Msa0025740 | Msa0767220 | 0.815217 | 1.035223e-51 | -8.615850e-47 |
| Msa0025740 | Msa0771580 | 0.826260 | 2.990904e-54 | -8.615850e-47 |
| Msa0025740 | Msa0771720 | 0.805798 | 1.121998e-49 | -8.615850e-47 |
| Msa0025740 | Msa0787240 | 0.813846 | 2.081214e-51 | -8.615850e-47 |
| Msa0025740 | Msa0790390 | -0.807547 | 4.792361e-50 | -8.615850e-47 |
| Msa0025740 | Msa0790660 | -0.842808 | 2.062240e-58 | -8.615850e-47 |
| Msa0025740 | Msa0795080 | 0.823158 | 1.610611e-53 | -8.615850e-47 |
| Msa0025740 | Msa0798030 | 0.813268 | 2.789586e-51 | -8.615850e-47 |
| Msa0025740 | Msa0816590 | 0.820165 | 7.921966e-53 | -8.615850e-47 |
| Msa0025740 | Msa0820850 | 0.803441 | 3.480671e-49 | -8.615850e-47 |
| Msa0025740 | Msa0827470 | 0.804401 | 2.198787e-49 | -8.615850e-47 |
| Msa0025740 | Msa0832150 | 0.804958 | 1.682189e-49 | -8.615850e-47 |
| Msa0025740 | Msa0860410 | 0.818436 | 1.962478e-52 | -8.615850e-47 |
| Msa0025740 | Msa0861920 | 0.802773 | 4.784768e-49 | -8.615850e-47 |
| Msa0025740 | Msa0866950 | 0.800599 | 1.336173e-48 | -8.615850e-47 |
| Msa0025740 | Msa0869120 | 0.844220 | 8.649163e-59 | -8.615850e-47 |
| Msa0025740 | Msa0876580 | 0.845721 | 3.403184e-59 | -8.615850e-47 |
| Msa0025740 | Msa0882510 | 0.802267 | 6.083974e-49 | -8.615850e-47 |
| Msa0025740 | Msa0899230 | 0.835323 | 1.794496e-56 | -8.615850e-47 |
| Msa0025740 | Msa0908170 | 0.824632 | 7.263932e-54 | -8.615850e-47 |
| Msa0025740 | Msa0910980 | -0.813524 | 2.449989e-51 | -8.615850e-47 |
| Msa0025740 | Msa0927670 | 0.835678 | 1.458774e-56 | -8.615850e-47 |
| Msa0025740 | Msa0933230 | 0.836253 | 1.042696e-56 | -8.615850e-47 |
| Msa0025740 | Msa0933310 | 0.818108 | 2.327766e-52 | -8.615850e-47 |
| Msa0025740 | Msa0946690 | -0.832746 | 7.928623e-56 | -8.615850e-47 |
| Msa0025740 | Msa0952020 | 0.822338 | 2.498370e-53 | -8.615850e-47 |
| Msa0025740 | Msa0958920 | 0.831170 | 1.942751e-55 | -8.615850e-47 |
| Msa0025740 | Msa0960160 | 0.859040 | 5.443357e-63 | -8.615850e-47 |
| Msa0025740 | Msa0960740 | 0.807920 | 3.992116e-50 | -8.615850e-47 |
| Msa0025740 | Msa0971020 | 0.824512 | 7.755492e-54 | -8.615850e-47 |
| Msa0025740 | Msa0971090 | 0.809844 | 1.547580e-50 | -8.615850e-47 |
| Msa0025740 | Msa0974630 | 0.830816 | 2.372530e-55 | -8.615850e-47 |
| Msa0025740 | Msa0982270 | 0.800447 | 1.435156e-48 | -8.615850e-47 |
| Msa0025740 | Msa0999040 | 0.850011 | 2.237253e-60 | -8.615850e-47 |
| Msa0025740 | Msa1021540 | 0.804772 | 1.840048e-49 | -8.615850e-47 |
| Msa0025740 | Msa1026410 | 0.808218 | 3.449757e-50 | -8.615850e-47 |
| Msa0025740 | Msa1029080 | -0.803724 | 3.040977e-49 | -8.615850e-47 |
| Msa0025740 | Msa1032440 | 0.819031 | 1.437851e-52 | -8.615850e-47 |
| Msa0025740 | Msa1039880 | 0.850551 | 1.578799e-60 | -8.615850e-47 |
| Msa0025740 | Msa1055680 | 0.809714 | 1.650771e-50 | -8.615850e-47 |
| Msa0025740 | Msa1063510 | 0.817400 | 3.362777e-52 | -8.615850e-47 |
| Msa0025740 | Msa1073070 | -0.818158 | 2.268230e-52 | -8.615850e-47 |
| Msa0025740 | Msa1077340 | 0.800876 | 1.173064e-48 | -8.615850e-47 |
| Msa0025740 | Msa1081590 | 0.809760 | 1.613926e-50 | -8.615850e-47 |
| Msa0025740 | Msa1082500 | 0.830422 | 2.962955e-55 | -8.615850e-47 |
| Msa0025740 | Msa1092090 | 0.831617 | 1.508111e-55 | -8.615850e-47 |
| Msa0025740 | Msa1102790 | 0.830454 | 2.910285e-55 | -8.615850e-47 |
| Msa0025740 | Msa1109350 | 0.802217 | 6.229796e-49 | -8.615850e-47 |
| Msa0025740 | Msa1118110 | 0.820355 | 7.166019e-53 | -8.615850e-47 |
| Msa0025740 | Msa1130270 | -0.808772 | 2.628126e-50 | -8.615850e-47 |
| Msa0025740 | Msa1151710 | 0.809182 | 2.147148e-50 | -8.615850e-47 |
| Msa0025740 | Msa1151720 | 0.802640 | 5.098140e-49 | -8.615850e-47 |
| Msa0025740 | Msa1156170 | -0.800178 | 1.628021e-48 | -8.615850e-47 |
| Msa0025740 | Msa1172670 | 0.812489 | 4.131364e-51 | -8.615850e-47 |
| Msa0025740 | Msa1174040 | 0.807833 | 4.166944e-50 | -8.615850e-47 |
| Msa0025740 | Msa1176270 | 0.805979 | 1.027414e-49 | -8.615850e-47 |
| Msa0025740 | Msa1201120 | 0.824277 | 8.805653e-54 | -8.615850e-47 |
| Msa0025740 | Msa1201560 | 0.801639 | 8.188147e-49 | -8.615850e-47 |
| Msa0025740 | Msa1214890 | 0.814053 | 1.874065e-51 | -8.615850e-47 |
| Msa0025740 | Msa1217830 | 0.816053 | 6.742934e-52 | -8.615850e-47 |
| Msa0025740 | Msa1224480 | 0.809767 | 1.607600e-50 | -8.615850e-47 |
| Msa0025740 | Msa1233500 | 0.854994 | 8.491934e-62 | -8.615850e-47 |
| Msa0025740 | Msa1233890 | 0.801005 | 1.104072e-48 | -8.615850e-47 |
| Msa0025740 | Msa1247250 | 0.800455 | 1.429985e-48 | -8.615850e-47 |
| Msa0025740 | Msa1249920 | 0.802692 | 4.972177e-49 | -8.615850e-47 |
| Msa0025740 | Msa1255040 | -0.807600 | 4.670039e-50 | -8.615850e-47 |
| Msa0025740 | Msa1276440 | 0.861121 | 1.281830e-63 | -8.615850e-47 |
| Msa0025740 | Msa1296940 | 0.822388 | 2.432832e-53 | -8.615850e-47 |
| Msa0025740 | Msa1303160 | 0.804346 | 2.257975e-49 | -8.615850e-47 |
| Msa0025740 | Msa1306750 | 0.830038 | 3.676571e-55 | -8.615850e-47 |
| Msa0025740 | Msa1308590 | 0.812447 | 4.219797e-51 | -8.615850e-47 |
| Msa0025740 | Msa1314340 | 0.806631 | 7.488212e-50 | -8.615850e-47 |
| Msa0025740 | Msa1322190 | 0.821017 | 5.050054e-53 | -8.615850e-47 |
| Msa0025740 | Msa1331320 | 0.800599 | 1.336568e-48 | -8.615850e-47 |
| Msa0025740 | Msa1331910 | 0.802673 | 5.017947e-49 | -8.615850e-47 |
| Msa0025740 | Msa1340810 | 0.808470 | 3.049358e-50 | -8.615850e-47 |
| Msa0025740 | Msa1358610 | -0.809049 | 2.292783e-50 | -8.615850e-47 |
| Msa0025740 | Msa1362880 | 0.804421 | 2.177667e-49 | -8.615850e-47 |
| Msa0025740 | Msa1371240 | 0.811455 | 6.941153e-51 | -8.615850e-47 |
| Msa0025740 | Msa1372580 | 0.817291 | 3.558971e-52 | -8.615850e-47 |
| Msa0025740 | Msa1374470 | 0.801277 | 9.711969e-49 | -8.615850e-47 |
| Msa0025740 | Msa1388860 | 0.811761 | 5.955165e-51 | -8.615850e-47 |
| Msa0025740 | Msa1389400 | 0.800160 | 1.642006e-48 | -8.615850e-47 |
| Msa0025740 | Msa1403580 | -0.813444 | 2.551222e-51 | -8.615850e-47 |
| Msa0025740 | Msa1407470 | 0.800422 | 1.452290e-48 | -8.615850e-47 |
| Msa0025740 | Msa1411020 | 0.830191 | 3.373664e-55 | -8.615850e-47 |
| Msa0025740 | Msa1412070 | 0.806605 | 7.585297e-50 | -8.615850e-47 |
| Msa0025740 | Msa1412890 | 0.804495 | 2.101473e-49 | -8.615850e-47 |
| Msa0025740 | Msa1414690 | 0.804529 | 2.067439e-49 | -8.615850e-47 |
| Msa0025740 | Msa1420140 | 0.845805 | 3.228732e-59 | -8.615850e-47 |
| Msa0025740 | Msa1420490 | 0.813417 | 2.586426e-51 | -8.615850e-47 |
| Msa0025740 | Msa1423390 | 0.812092 | 5.045215e-51 | -8.615850e-47 |
| Msa0025740 | Msa1424290 | 0.826561 | 2.535566e-54 | -8.615850e-47 |
| Msa0025740 | Msa1424450 | 0.816775 | 4.648346e-52 | -8.615850e-47 |
| Msa0025740 | Msa1424680 | 0.815570 | 8.640263e-52 | -8.615850e-47 |
| Msa0025740 | Msa1425100 | 0.838073 | 3.571811e-57 | -8.615850e-47 |
| Msa0025740 | Msa1434350 | 0.831593 | 1.528595e-55 | -8.615850e-47 |
| Msa0025740 | Msa1439320 | 0.833058 | 6.631844e-56 | -8.615850e-47 |
| Msa0025740 | Msa1440000 | 0.804253 | 2.360438e-49 | -8.615850e-47 |
| Msa0025740 | Msa1440370 | 0.808965 | 2.389422e-50 | -8.615850e-47 |
| Msa0025740 | Msa1440810 | 0.810457 | 1.141803e-50 | -8.615850e-47 |
| Msa0025740 | Msa1443290 | -0.824027 | 1.008126e-53 | -8.615850e-47 |
| Msa0025740 | Msa1444740 | 0.859665 | 3.533902e-63 | -8.615850e-47 |
| Msa0025740 | Msa1453080 | 0.800455 | 1.429731e-48 | -8.615850e-47 |
| Msa0025740 | Msa1453560 | 0.803200 | 3.904884e-49 | -8.615850e-47 |
| Msa0025740 | Msa1460050 | 0.810645 | 1.040036e-50 | -8.615850e-47 |
| Msa0025740 | Msa1463600 | 0.807784 | 4.268842e-50 | -8.615850e-47 |
| Msa0025740 | Msa1466730 | 0.815671 | 8.204710e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0025740 | MtrunA17_Chr1g0180631 | 95.238 | 336 | 13 | 1 | 1 | 336 | 1 | 333 | 0.0 | 635 |
| Msa0025740 | MtrunA17_Chr7g0264601 | 46.974 | 347 | 133 | 9 | 29 | 336 | 15 | 349 | 1.28e-77 | 241 |
| Msa0025740 | MtrunA17_Chr4g0028461 | 39.739 | 307 | 134 | 3 | 30 | 336 | 69 | 324 | 1.39e-51 | 173 |
| Msa0025740 | MtrunA17_Chr2g0327311 | 41.081 | 185 | 88 | 4 | 26 | 204 | 64 | 233 | 1.71e-35 | 131 |
| Msa0025740 | MtrunA17_Chr8g0386231 | 40.556 | 180 | 94 | 2 | 25 | 203 | 49 | 216 | 2.13e-26 | 106 |
| Msa0025740 | MtrunA17_Chr3g0132051 | 33.143 | 175 | 100 | 2 | 29 | 202 | 36 | 194 | 1.71e-22 | 95.1 |
| Msa0025740 | MtrunA17_Chr3g0094841 | 31.313 | 198 | 111 | 3 | 29 | 224 | 28 | 202 | 2.13e-22 | 94.0 |
| Msa0025740 | MtrunA17_Chr5g0429111 | 32.184 | 174 | 95 | 3 | 30 | 203 | 56 | 206 | 1.55e-21 | 93.6 |
| Msa0025740 | MtrunA17_Chr8g0337951 | 26.144 | 306 | 153 | 7 | 30 | 335 | 32 | 264 | 3.62e-20 | 88.6 |
| Msa0025740 | MtrunA17_Chr3g0132061 | 30.682 | 176 | 106 | 2 | 29 | 203 | 36 | 196 | 4.84e-20 | 89.0 |
| Msa0025740 | MtrunA17_Chr3g0128091 | 26.852 | 324 | 148 | 8 | 26 | 335 | 35 | 283 | 3.92e-19 | 85.9 |
| Msa0025740 | MtrunA17_Chr2g0290471 | 33.520 | 179 | 103 | 3 | 26 | 203 | 33 | 196 | 5.43e-19 | 85.5 |
| Msa0025740 | MtrunA17_Chr6g0454851 | 48.485 | 66 | 34 | 0 | 26 | 91 | 17 | 82 | 4.55e-12 | 67.4 |
| Msa0025740 | MtrunA17_Chr4g0001151 | 35.075 | 134 | 71 | 2 | 29 | 161 | 170 | 288 | 8.12e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0025740 | AT5G03380.1 | 40.050 | 402 | 165 | 12 | 1 | 336 | 1 | 392 | 4.52e-60 | 197 |
| Msa0025740 | AT5G03380.2 | 40.431 | 371 | 148 | 11 | 32 | 336 | 2 | 365 | 8.13e-58 | 191 |
| Msa0025740 | AT5G03380.2 | 42.391 | 92 | 47 | 2 | 142 | 229 | 1 | 90 | 4.85e-11 | 63.5 |
| Msa0025740 | AT2G36950.1 | 41.713 | 362 | 128 | 13 | 30 | 336 | 53 | 386 | 5.28e-54 | 182 |
| Msa0025740 | AT2G28090.1 | 40.722 | 194 | 95 | 3 | 12 | 204 | 14 | 188 | 2.06e-30 | 116 |
| Msa0025740 | AT3G02960.1 | 32.386 | 176 | 96 | 4 | 29 | 203 | 38 | 191 | 6.01e-27 | 107 |
| Msa0025740 | AT1G29000.1 | 31.818 | 176 | 107 | 1 | 30 | 205 | 18 | 180 | 2.36e-22 | 95.5 |
| Msa0025740 | AT1G29000.2 | 31.818 | 176 | 107 | 1 | 30 | 205 | 18 | 180 | 2.36e-22 | 95.5 |
| Msa0025740 | AT5G24580.4 | 28.571 | 175 | 103 | 1 | 30 | 204 | 59 | 211 | 1.14e-18 | 85.5 |
| Msa0025740 | AT5G24580.1 | 28.571 | 175 | 103 | 1 | 30 | 204 | 59 | 211 | 1.14e-18 | 85.5 |
| Msa0025740 | AT5G24580.2 | 28.571 | 175 | 103 | 1 | 30 | 204 | 58 | 210 | 1.22e-18 | 85.5 |
| Msa0025740 | AT5G50740.2 | 39.416 | 137 | 67 | 2 | 29 | 164 | 29 | 150 | 1.62e-16 | 76.3 |
| Msa0025740 | AT5G50740.4 | 39.416 | 137 | 67 | 2 | 29 | 164 | 36 | 157 | 2.12e-16 | 76.3 |
| Msa0025740 | AT5G24580.3 | 26.857 | 175 | 103 | 2 | 30 | 204 | 59 | 208 | 1.89e-15 | 76.3 |
| Msa0025740 | AT5G27690.1 | 34.951 | 103 | 59 | 2 | 106 | 208 | 5 | 99 | 5.38e-11 | 63.5 |
Find 100 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTGAGGAGGTGGATTATT+AGG | 0.166312 | 1_1:-49211749 | None:intergenic |
| TTCTTCTCTTCTTCTTTCTT+AGG | 0.200920 | 1_1:-49211413 | None:intergenic |
| AATTAATTAAATACCTCTTT+AGG | 0.230588 | 1_1:-49210868 | None:intergenic |
| CGTTAAATTACAAGAGAAAT+TGG | 0.275240 | 1_1:+49210687 | Msa0025740:CDS |
| AATAGGATATGTTAGATATT+AGG | 0.278926 | 1_1:-49210194 | None:intergenic |
| CAACATTATATGGAGAATAA+TGG | 0.281211 | 1_1:+49211659 | Msa0025740:CDS |
| CAATTTCTCTTGTAATTTAA+CGG | 0.310246 | 1_1:-49210686 | None:intergenic |
| TAATAATAATCAACATTATA+TGG | 0.312578 | 1_1:+49211649 | Msa0025740:CDS |
| TCCTTCATCAGCTTTCTTCT+CGG | 0.317840 | 1_1:-49210397 | None:intergenic |
| AGAGTGGGGAGAGAAGTATA+AGG | 0.321545 | 1_1:-49210129 | None:intergenic |
| GGCTGAGAAAGCAAAGAAAA+AGG | 0.352195 | 1_1:+49210708 | Msa0025740:CDS |
| CCATGTGTGTGATTGGTAAT+AGG | 0.370399 | 1_1:-49210211 | None:intergenic |
| TACCTCACCCACCGTTTCAT+TGG | 0.371572 | 1_1:+49210089 | Msa0025740:five_prime_UTR |
| AACATTATATGGAGAATAAT+GGG | 0.379007 | 1_1:+49211660 | Msa0025740:CDS |
| GAAGGTGGAGGTTAATAAAA+TGG | 0.389488 | 1_1:+49211520 | Msa0025740:CDS |
| TCCTCAGCTTTCTTCTCCTC+CGG | 0.392060 | 1_1:-49210808 | None:intergenic |
| TCAAACAAAGTGACAGTTAC+CGG | 0.394403 | 1_1:+49210652 | Msa0025740:CDS |
| GTGAGGTAATGGGATTGGTT+AGG | 0.394881 | 1_1:-49210074 | None:intergenic |
| TGAAACGGTGGGTGAGGTAA+TGG | 0.399876 | 1_1:-49210085 | None:intergenic |
| AGATACTCTATCAAATCCTT+TGG | 0.402024 | 1_1:-49211353 | None:intergenic |
| CCAAATCCTTGTCTCCATCT+AGG | 0.412236 | 1_1:-49211307 | None:intergenic |
| AGACGCCGGAGCCGAGAAAC+CGG | 0.413190 | 1_1:+49210759 | Msa0025740:CDS |
| TGAGGTAATGGGATTGGTTA+GGG | 0.418479 | 1_1:-49210073 | None:intergenic |
| GTTGAAACGGCGAACCTAGA+TGG | 0.423969 | 1_1:+49211293 | Msa0025740:CDS |
| CCTAGATGGAGACAAGGATT+TGG | 0.435138 | 1_1:+49211307 | Msa0025740:CDS |
| TCTGAGGAGGTGGATTATTA+GGG | 0.436820 | 1_1:-49211748 | None:intergenic |
| TTTAACGGCGTCAAATTTAC+CGG | 0.439390 | 1_1:-49210671 | None:intergenic |
| ACCTCTCCCATGTGTGTGAT+TGG | 0.439873 | 1_1:-49210218 | None:intergenic |
| AAGTATTAGACTGGCTCAGC+TGG | 0.441263 | 1_1:+49212008 | Msa0025740:three_prime_UTR |
| GAGTGGGGAGAGAAGTATAA+GGG | 0.443777 | 1_1:-49210128 | None:intergenic |
| TGAAGGTAGATCTGCTTTAA+CGG | 0.444200 | 1_1:-49210632 | None:intergenic |
| TTCTCTTCTTCTTTCTTAGG+TGG | 0.449970 | 1_1:-49211410 | None:intergenic |
| GAAACGGTGGGTGAGGTAAT+GGG | 0.452517 | 1_1:-49210084 | None:intergenic |
| ATTAGACTGGCTCAGCTGGC+TGG | 0.453921 | 1_1:+49212012 | Msa0025740:three_prime_UTR |
| CGGTGGAGATGCGGCGAAGG+TGG | 0.453941 | 1_1:+49211505 | Msa0025740:CDS |
| CTCCGCCGGTTTCTCGGCTC+CGG | 0.455657 | 1_1:-49210764 | None:intergenic |
| AAGTCGAGTTTGTAAACAAC+AGG | 0.458834 | 1_1:-49210456 | None:intergenic |
| GTAACTGTCACTTTGTTTGA+AGG | 0.460810 | 1_1:-49210649 | None:intergenic |
| TATTAGGATTGTGGTGTTGT+GGG | 0.465636 | 1_1:-49210178 | None:intergenic |
| TGAAAAGAAAGAGAAAGAAA+AGG | 0.465817 | 1_1:+49211454 | Msa0025740:CDS |
| ACAGGAGCAGGAGCAGGAAC+AGG | 0.469773 | 1_1:-49210438 | None:intergenic |
| TTTCTCTTACAAATCTGGAC+AGG | 0.492641 | 1_1:-49212040 | None:intergenic |
| GGGAGAGAAGTATAAGGGAG+AGG | 0.494183 | 1_1:-49210123 | None:intergenic |
| AAGTAGTAACTATGCTGGTA+TGG | 0.497316 | 1_1:+49211589 | Msa0025740:CDS |
| GAAGAAAGAAGAGAAGAAAG+TGG | 0.498576 | 1_1:+49211481 | Msa0025740:CDS |
| AACCAATGAAACGGTGGGTG+AGG | 0.500842 | 1_1:-49210091 | None:intergenic |
| GCTCCGATGTATTATTATGA+AGG | 0.510924 | 1_1:+49211563 | Msa0025740:CDS |
| TGGAGATGCGGCGAAGGTGG+AGG | 0.511085 | 1_1:+49211508 | Msa0025740:CDS |
| TTTCATCATCAACCTGGGTA+TGG | 0.520569 | 1_1:+49211617 | Msa0025740:CDS |
| AATATATATAACCAATGAAA+CGG | 0.528489 | 1_1:-49210100 | None:intergenic |
| CACATGAGAGAACAAGCATT+GGG | 0.529344 | 1_1:-49211788 | None:intergenic |
| TCACTGAACATCTGAGGAGG+TGG | 0.529922 | 1_1:-49211758 | None:intergenic |
| TTATTAGGGTGCATGTAATA+CGG | 0.531642 | 1_1:-49211734 | None:intergenic |
| TATAGAGATAAGTATTAGAC+TGG | 0.533091 | 1_1:+49211999 | Msa0025740:three_prime_UTR |
| ACCGAGAAGAAAGCTGATGA+AGG | 0.540526 | 1_1:+49210396 | Msa0025740:CDS |
| GGTACTTGAGGTGGCTGCAT+AGG | 0.542416 | 1_1:-49211713 | None:intergenic |
| TTATTAAACAGGAGTTGAAA+CGG | 0.544576 | 1_1:+49211280 | Msa0025740:intron |
| TCACATGAGAGAACAAGCAT+TGG | 0.545482 | 1_1:-49211789 | None:intergenic |
| GGTGGGTGAGGTAATGGGAT+TGG | 0.546089 | 1_1:-49210079 | None:intergenic |
| CATCAACCTGGGTATGGTGG+TGG | 0.547203 | 1_1:+49211623 | Msa0025740:CDS |
| AAAGAAAGAGAAAGAAAAGG+CGG | 0.548738 | 1_1:+49211457 | Msa0025740:CDS |
| CGAAGTGCTCGTCATTTCGC+TGG | 0.552259 | 1_1:+49210510 | Msa0025740:CDS |
| ATATTAGGATTGTGGTGTTG+TGG | 0.552797 | 1_1:-49210179 | None:intergenic |
| TATGTTAGATATTAGGATTG+TGG | 0.552830 | 1_1:-49210187 | None:intergenic |
| AGTTTGTAAACAACAGGAGC+AGG | 0.553378 | 1_1:-49210450 | None:intergenic |
| GGTCAAAGTAGTAACTATGC+TGG | 0.556121 | 1_1:+49211584 | Msa0025740:CDS |
| AAGGATTTGGTAACAGTGAA+AGG | 0.556405 | 1_1:+49211320 | Msa0025740:CDS |
| GGACGGTGGAGATGCGGCGA+AGG | 0.557262 | 1_1:+49211502 | Msa0025740:CDS |
| GATCAATTTCATCATCAACC+TGG | 0.560641 | 1_1:+49211611 | Msa0025740:CDS |
| CCTATTACCAATCACACACA+TGG | 0.561709 | 1_1:+49210211 | Msa0025740:exon |
| AGAATCATTATGAAGTTCAA+AGG | 0.563915 | 1_1:+49211031 | Msa0025740:CDS |
| TAAACAACAGGAGCAGGAGC+AGG | 0.567749 | 1_1:-49210444 | None:intergenic |
| TAATACATCGGAGCTTGTAT+CGG | 0.568277 | 1_1:-49211554 | None:intergenic |
| GAAGAGAAGAAAGTGGACGG+TGG | 0.569092 | 1_1:+49211488 | Msa0025740:CDS |
| GAAAGTGGACGGTGGAGATG+CGG | 0.575166 | 1_1:+49211496 | Msa0025740:CDS |
| CATCATCAACCTGGGTATGG+TGG | 0.581791 | 1_1:+49211620 | Msa0025740:CDS |
| GAAAGGAACAATGGAACCAA+AGG | 0.586961 | 1_1:+49211337 | Msa0025740:CDS |
| TATATAACCAATGAAACGGT+GGG | 0.588620 | 1_1:-49210096 | None:intergenic |
| AAAGAAGAGAAGAAAGTGGA+CGG | 0.599132 | 1_1:+49211485 | Msa0025740:CDS |
| ATCAATTTCATCATCAACCT+GGG | 0.600796 | 1_1:+49211612 | Msa0025740:CDS |
| GGTAACAGTGAAAGGAACAA+TGG | 0.605375 | 1_1:+49211328 | Msa0025740:CDS |
| CGCCGGAGCCGAGAAACCGG+CGG | 0.606076 | 1_1:+49210762 | Msa0025740:CDS |
| ACCAATCACACACATGGGAG+AGG | 0.606723 | 1_1:+49210217 | Msa0025740:exon |
| TGCATGTAATACGGTACTTG+AGG | 0.613430 | 1_1:-49211725 | None:intergenic |
| TTCTCATCACTGAACATCTG+AGG | 0.619062 | 1_1:-49211764 | None:intergenic |
| ATATATAACCAATGAAACGG+TGG | 0.620687 | 1_1:-49210097 | None:intergenic |
| AAACTCGACTTACATTGTGA+AGG | 0.624408 | 1_1:+49210468 | Msa0025740:CDS |
| TGACCTTCATAATAATACAT+CGG | 0.624646 | 1_1:-49211566 | None:intergenic |
| ATGAATATGAACCATGGTGG+TGG | 0.625142 | 1_1:+49211686 | Msa0025740:CDS |
| TTATAACCACCACCATACCC+AGG | 0.654821 | 1_1:-49211629 | None:intergenic |
| TCATCACTGAACATCTGAGG+AGG | 0.657828 | 1_1:-49211761 | None:intergenic |
| ATGTAATACGGTACTTGAGG+TGG | 0.661458 | 1_1:-49211722 | None:intergenic |
| GAGTGTGTATACATTATGCA+CGG | 0.664534 | 1_1:+49211825 | Msa0025740:three_prime_UTR |
| ACCGGAGGAGAAGAAAGCTG+AGG | 0.672813 | 1_1:+49210807 | Msa0025740:CDS |
| AAGATCAGATTGCACTGTGA+CGG | 0.678394 | 1_1:+49210989 | Msa0025740:CDS |
| GGCGAACCTAGATGGAGACA+AGG | 0.682048 | 1_1:+49211301 | Msa0025740:CDS |
| CTATTACCAATCACACACAT+GGG | 0.698797 | 1_1:+49210212 | Msa0025740:exon |
| GCATAGGATAACCACCACCA+TGG | 0.719423 | 1_1:-49211697 | None:intergenic |
| GGGTATATGAATATGAACCA+TGG | 0.726468 | 1_1:+49211680 | Msa0025740:CDS |
| TATATGAATATGAACCATGG+TGG | 0.771270 | 1_1:+49211683 | Msa0025740:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTAATTAATACAAAGT+CGG | - | chr1_1:49210934-49210953 | None:intergenic | 10.0% |
| !! | TAATAATAATCAACATTATA+TGG | + | chr1_1:49211649-49211668 | Msa0025740:CDS | 10.0% |
| !!! | AAATTTTGTTTATTTGTTTA+TGG | + | chr1_1:49212156-49212175 | Msa0025740:three_prime_UTR | 10.0% |
| !! | AAATTTAATTAATACAAAGT+CGG | - | chr1_1:49210934-49210953 | None:intergenic | 10.0% |
| !! | TAATAATAATCAACATTATA+TGG | + | chr1_1:49211649-49211668 | Msa0025740:CDS | 10.0% |
| !!! | AAATTTTGTTTATTTGTTTA+TGG | + | chr1_1:49212156-49212175 | Msa0025740:three_prime_UTR | 10.0% |
| !! | AATATATATAACCAATGAAA+CGG | - | chr1_1:49210103-49210122 | None:intergenic | 15.0% |
| !! | ATATACTAATACTAATGAAA+AGG | - | chr1_1:49210261-49210280 | None:intergenic | 15.0% |
| !! | AGAATATTCATTAACAAATT+TGG | + | chr1_1:49210589-49210608 | Msa0025740:intron | 15.0% |
| !! | AATTAATTAAATACCTCTTT+AGG | - | chr1_1:49210871-49210890 | None:intergenic | 15.0% |
| !!! | ATTTATTAATTTTCAGAGTA+CGG | + | chr1_1:49210958-49210977 | Msa0025740:intron | 15.0% |
| !!! | GGTTATTTTATTTGAAATTT+AGG | - | chr1_1:49211067-49211086 | None:intergenic | 15.0% |
| !!! | TTAATTAATTGTTAATTTGG+TGG | + | chr1_1:49211248-49211267 | Msa0025740:intron | 15.0% |
| !! | AATATATATAACCAATGAAA+CGG | - | chr1_1:49210103-49210122 | None:intergenic | 15.0% |
| !! | ATATACTAATACTAATGAAA+AGG | - | chr1_1:49210261-49210280 | None:intergenic | 15.0% |
| !! | AGAATATTCATTAACAAATT+TGG | + | chr1_1:49210589-49210608 | Msa0025740:intron | 15.0% |
| !! | AATTAATTAAATACCTCTTT+AGG | - | chr1_1:49210871-49210890 | None:intergenic | 15.0% |
| !!! | ATTTATTAATTTTCAGAGTA+CGG | + | chr1_1:49210958-49210977 | Msa0025740:intron | 15.0% |
| !!! | GGTTATTTTATTTGAAATTT+AGG | - | chr1_1:49211067-49211086 | None:intergenic | 15.0% |
| !!! | TTAATTAATTGTTAATTTGG+TGG | + | chr1_1:49211248-49211267 | Msa0025740:intron | 15.0% |
| !! | AATAGGATATGTTAGATATT+AGG | - | chr1_1:49210197-49210216 | None:intergenic | 20.0% |
| !!! | AACAAATTTGGAATATATTC+AGG | + | chr1_1:49210601-49210620 | Msa0025740:intron | 20.0% |
| !! | CAATTTCTCTTGTAATTTAA+CGG | - | chr1_1:49210689-49210708 | None:intergenic | 20.0% |
| !! | AACATTATATGGAGAATAAT+GGG | + | chr1_1:49211660-49211679 | Msa0025740:CDS | 20.0% |
| !!! | CATATAGAGAAATTTTATGT+TGG | + | chr1_1:49211958-49211977 | Msa0025740:three_prime_UTR | 20.0% |
| !! | AATAGGATATGTTAGATATT+AGG | - | chr1_1:49210197-49210216 | None:intergenic | 20.0% |
| !!! | AACAAATTTGGAATATATTC+AGG | + | chr1_1:49210601-49210620 | Msa0025740:intron | 20.0% |
| !! | CAATTTCTCTTGTAATTTAA+CGG | - | chr1_1:49210689-49210708 | None:intergenic | 20.0% |
| !! | AACATTATATGGAGAATAAT+GGG | + | chr1_1:49211660-49211679 | Msa0025740:CDS | 20.0% |
| !!! | CATATAGAGAAATTTTATGT+TGG | + | chr1_1:49211958-49211977 | Msa0025740:three_prime_UTR | 20.0% |
| ! | TATGTTAGATATTAGGATTG+TGG | - | chr1_1:49210190-49210209 | None:intergenic | 25.0% |
| ! | AGGAATATTGAATATGCTAT+TGG | - | chr1_1:49210294-49210313 | None:intergenic | 25.0% |
| ! | AATAGCATATTCAATATTCC+TGG | + | chr1_1:49210293-49210312 | Msa0025740:intron | 25.0% |
| ! | ACACAAAAAGAAAATATTCC+AGG | - | chr1_1:49210314-49210333 | None:intergenic | 25.0% |
| ! | CGTTAAATTACAAGAGAAAT+TGG | + | chr1_1:49210687-49210706 | Msa0025740:CDS | 25.0% |
| ! | AGAATCATTATGAAGTTCAA+AGG | + | chr1_1:49211031-49211050 | Msa0025740:CDS | 25.0% |
| ! | TTATTAAACAGGAGTTGAAA+CGG | + | chr1_1:49211280-49211299 | Msa0025740:intron | 25.0% |
| ! | TGAAAAGAAAGAGAAAGAAA+AGG | + | chr1_1:49211454-49211473 | Msa0025740:CDS | 25.0% |
| ! | TGACCTTCATAATAATACAT+CGG | - | chr1_1:49211569-49211588 | None:intergenic | 25.0% |
| ! | CAACATTATATGGAGAATAA+TGG | + | chr1_1:49211659-49211678 | Msa0025740:CDS | 25.0% |
| ! | TATAGAGATAAGTATTAGAC+TGG | + | chr1_1:49211999-49212018 | Msa0025740:three_prime_UTR | 25.0% |
| !! | TTCTTTTTCTCTTACAAATC+TGG | - | chr1_1:49212048-49212067 | None:intergenic | 25.0% |
| ! | TATGTTAGATATTAGGATTG+TGG | - | chr1_1:49210190-49210209 | None:intergenic | 25.0% |
| ! | AGGAATATTGAATATGCTAT+TGG | - | chr1_1:49210294-49210313 | None:intergenic | 25.0% |
| ! | AATAGCATATTCAATATTCC+TGG | + | chr1_1:49210293-49210312 | Msa0025740:intron | 25.0% |
| ! | ACACAAAAAGAAAATATTCC+AGG | - | chr1_1:49210314-49210333 | None:intergenic | 25.0% |
| ! | CGTTAAATTACAAGAGAAAT+TGG | + | chr1_1:49210687-49210706 | Msa0025740:CDS | 25.0% |
| ! | AGAATCATTATGAAGTTCAA+AGG | + | chr1_1:49211031-49211050 | Msa0025740:CDS | 25.0% |
| ! | TTATTAAACAGGAGTTGAAA+CGG | + | chr1_1:49211280-49211299 | Msa0025740:intron | 25.0% |
| ! | TGAAAAGAAAGAGAAAGAAA+AGG | + | chr1_1:49211454-49211473 | Msa0025740:CDS | 25.0% |
| ! | TGACCTTCATAATAATACAT+CGG | - | chr1_1:49211569-49211588 | None:intergenic | 25.0% |
| ! | CAACATTATATGGAGAATAA+TGG | + | chr1_1:49211659-49211678 | Msa0025740:CDS | 25.0% |
| ! | TATAGAGATAAGTATTAGAC+TGG | + | chr1_1:49211999-49212018 | Msa0025740:three_prime_UTR | 25.0% |
| !! | TTCTTTTTCTCTTACAAATC+TGG | - | chr1_1:49212048-49212067 | None:intergenic | 25.0% |
| TATATAACCAATGAAACGGT+GGG | - | chr1_1:49210099-49210118 | None:intergenic | 30.0% | |
| ATATATAACCAATGAAACGG+TGG | - | chr1_1:49210100-49210119 | None:intergenic | 30.0% | |
| ! | AGATTTTGTGTTTGAAGAGT+GGG | - | chr1_1:49210147-49210166 | None:intergenic | 30.0% |
| ! | AAGATTTTGTGTTTGAAGAG+TGG | - | chr1_1:49210148-49210167 | None:intergenic | 30.0% |
| !!! | TCTTTAGGTTTTTTCTCTTC+AGG | - | chr1_1:49210856-49210875 | None:intergenic | 30.0% |
| TGAAGAGAAAAAACCTAAAG+AGG | + | chr1_1:49210855-49210874 | Msa0025740:CDS | 30.0% | |
| ! | TATTAATTTTCAGAGTACGG+TGG | + | chr1_1:49210961-49210980 | Msa0025740:intron | 30.0% |
| GGCTAATGATGTTATTAAAC+AGG | + | chr1_1:49211269-49211288 | Msa0025740:intron | 30.0% | |
| AGATACTCTATCAAATCCTT+TGG | - | chr1_1:49211356-49211375 | None:intergenic | 30.0% | |
| TTCTTCTCTTCTTCTTTCTT+AGG | - | chr1_1:49211416-49211435 | None:intergenic | 30.0% | |
| AGAAGAGAAGAAAGAAAAAG+AGG | + | chr1_1:49211424-49211443 | Msa0025740:CDS | 30.0% | |
| GAAGAGAAGAAAGAAAAAGA+GGG | + | chr1_1:49211425-49211444 | Msa0025740:CDS | 30.0% | |
| AAAGAAAGAGAAAGAAAAGG+CGG | + | chr1_1:49211457-49211476 | Msa0025740:CDS | 30.0% | |
| ATCAATTTCATCATCAACCT+GGG | + | chr1_1:49211612-49211631 | Msa0025740:CDS | 30.0% | |
| TATATGAATATGAACCATGG+TGG | + | chr1_1:49211683-49211702 | Msa0025740:CDS | 30.0% | |
| TTATTAGGGTGCATGTAATA+CGG | - | chr1_1:49211737-49211756 | None:intergenic | 30.0% | |
| TATATAACCAATGAAACGGT+GGG | - | chr1_1:49210099-49210118 | None:intergenic | 30.0% | |
| ATATATAACCAATGAAACGG+TGG | - | chr1_1:49210100-49210119 | None:intergenic | 30.0% | |
| ! | AGATTTTGTGTTTGAAGAGT+GGG | - | chr1_1:49210147-49210166 | None:intergenic | 30.0% |
| ! | AAGATTTTGTGTTTGAAGAG+TGG | - | chr1_1:49210148-49210167 | None:intergenic | 30.0% |
| !!! | TCTTTAGGTTTTTTCTCTTC+AGG | - | chr1_1:49210856-49210875 | None:intergenic | 30.0% |
| TGAAGAGAAAAAACCTAAAG+AGG | + | chr1_1:49210855-49210874 | Msa0025740:CDS | 30.0% | |
| ! | TATTAATTTTCAGAGTACGG+TGG | + | chr1_1:49210961-49210980 | Msa0025740:intron | 30.0% |
| GGCTAATGATGTTATTAAAC+AGG | + | chr1_1:49211269-49211288 | Msa0025740:intron | 30.0% | |
| AGATACTCTATCAAATCCTT+TGG | - | chr1_1:49211356-49211375 | None:intergenic | 30.0% | |
| TTCTTCTCTTCTTCTTTCTT+AGG | - | chr1_1:49211416-49211435 | None:intergenic | 30.0% | |
| AGAAGAGAAGAAAGAAAAAG+AGG | + | chr1_1:49211424-49211443 | Msa0025740:CDS | 30.0% | |
| GAAGAGAAGAAAGAAAAAGA+GGG | + | chr1_1:49211425-49211444 | Msa0025740:CDS | 30.0% | |
| AAAGAAAGAGAAAGAAAAGG+CGG | + | chr1_1:49211457-49211476 | Msa0025740:CDS | 30.0% | |
| ATCAATTTCATCATCAACCT+GGG | + | chr1_1:49211612-49211631 | Msa0025740:CDS | 30.0% | |
| TATATGAATATGAACCATGG+TGG | + | chr1_1:49211683-49211702 | Msa0025740:CDS | 30.0% | |
| TTATTAGGGTGCATGTAATA+CGG | - | chr1_1:49211737-49211756 | None:intergenic | 30.0% | |
| ! | GATTTTGTGTTTGAAGAGTG+GGG | - | chr1_1:49210146-49210165 | None:intergenic | 35.0% |
| !! | TATTAGGATTGTGGTGTTGT+GGG | - | chr1_1:49210181-49210200 | None:intergenic | 35.0% |
| ! | ATATTAGGATTGTGGTGTTG+TGG | - | chr1_1:49210182-49210201 | None:intergenic | 35.0% |
| CTATTACCAATCACACACAT+GGG | + | chr1_1:49210212-49210231 | Msa0025740:exon | 35.0% | |
| AAGTCGAGTTTGTAAACAAC+AGG | - | chr1_1:49210459-49210478 | None:intergenic | 35.0% | |
| AAACTCGACTTACATTGTGA+AGG | + | chr1_1:49210468-49210487 | Msa0025740:CDS | 35.0% | |
| TGAAGGTAGATCTGCTTTAA+CGG | - | chr1_1:49210635-49210654 | None:intergenic | 35.0% | |
| !! | GTAACTGTCACTTTGTTTGA+AGG | - | chr1_1:49210652-49210671 | None:intergenic | 35.0% |
| TCAAACAAAGTGACAGTTAC+CGG | + | chr1_1:49210652-49210671 | Msa0025740:CDS | 35.0% | |
| TTTAACGGCGTCAAATTTAC+CGG | - | chr1_1:49210674-49210693 | None:intergenic | 35.0% | |
| AAAATCCGACGAGAAAAAAC+CGG | + | chr1_1:49210789-49210808 | Msa0025740:CDS | 35.0% | |
| !!! | TCTTCAGGTTTTTTCTCTTC+AGG | - | chr1_1:49210841-49210860 | None:intergenic | 35.0% |
| ! | AAGGATTTGGTAACAGTGAA+AGG | + | chr1_1:49211320-49211339 | Msa0025740:CDS | 35.0% |
| TTCTCTTCTTCTTTCTTAGG+TGG | - | chr1_1:49211413-49211432 | None:intergenic | 35.0% | |
| GAAGAAAGAAGAGAAGAAAG+TGG | + | chr1_1:49211481-49211500 | Msa0025740:CDS | 35.0% | |
| AAAGAAGAGAAGAAAGTGGA+CGG | + | chr1_1:49211485-49211504 | Msa0025740:CDS | 35.0% | |
| GAAGGTGGAGGTTAATAAAA+TGG | + | chr1_1:49211520-49211539 | Msa0025740:CDS | 35.0% | |
| TAATACATCGGAGCTTGTAT+CGG | - | chr1_1:49211557-49211576 | None:intergenic | 35.0% | |
| GCTCCGATGTATTATTATGA+AGG | + | chr1_1:49211563-49211582 | Msa0025740:CDS | 35.0% | |
| AAGTAGTAACTATGCTGGTA+TGG | + | chr1_1:49211589-49211608 | Msa0025740:CDS | 35.0% | |
| GATCAATTTCATCATCAACC+TGG | + | chr1_1:49211611-49211630 | Msa0025740:CDS | 35.0% | |
| GGGTATATGAATATGAACCA+TGG | + | chr1_1:49211680-49211699 | Msa0025740:CDS | 35.0% | |
| GAGTGTGTATACATTATGCA+CGG | + | chr1_1:49211825-49211844 | Msa0025740:three_prime_UTR | 35.0% | |
| TTTCTCTTACAAATCTGGAC+AGG | - | chr1_1:49212043-49212062 | None:intergenic | 35.0% | |
| ! | GATTTTGTGTTTGAAGAGTG+GGG | - | chr1_1:49210146-49210165 | None:intergenic | 35.0% |
| !! | TATTAGGATTGTGGTGTTGT+GGG | - | chr1_1:49210181-49210200 | None:intergenic | 35.0% |
| ! | ATATTAGGATTGTGGTGTTG+TGG | - | chr1_1:49210182-49210201 | None:intergenic | 35.0% |
| CTATTACCAATCACACACAT+GGG | + | chr1_1:49210212-49210231 | Msa0025740:exon | 35.0% | |
| AAGTCGAGTTTGTAAACAAC+AGG | - | chr1_1:49210459-49210478 | None:intergenic | 35.0% | |
| AAACTCGACTTACATTGTGA+AGG | + | chr1_1:49210468-49210487 | Msa0025740:CDS | 35.0% | |
| TGAAGGTAGATCTGCTTTAA+CGG | - | chr1_1:49210635-49210654 | None:intergenic | 35.0% | |
| !! | GTAACTGTCACTTTGTTTGA+AGG | - | chr1_1:49210652-49210671 | None:intergenic | 35.0% |
| TCAAACAAAGTGACAGTTAC+CGG | + | chr1_1:49210652-49210671 | Msa0025740:CDS | 35.0% | |
| TTTAACGGCGTCAAATTTAC+CGG | - | chr1_1:49210674-49210693 | None:intergenic | 35.0% | |
| AAAATCCGACGAGAAAAAAC+CGG | + | chr1_1:49210789-49210808 | Msa0025740:CDS | 35.0% | |
| !!! | TCTTCAGGTTTTTTCTCTTC+AGG | - | chr1_1:49210841-49210860 | None:intergenic | 35.0% |
| ! | AAGGATTTGGTAACAGTGAA+AGG | + | chr1_1:49211320-49211339 | Msa0025740:CDS | 35.0% |
| TTCTCTTCTTCTTTCTTAGG+TGG | - | chr1_1:49211413-49211432 | None:intergenic | 35.0% | |
| GAAGAAAGAAGAGAAGAAAG+TGG | + | chr1_1:49211481-49211500 | Msa0025740:CDS | 35.0% | |
| AAAGAAGAGAAGAAAGTGGA+CGG | + | chr1_1:49211485-49211504 | Msa0025740:CDS | 35.0% | |
| GAAGGTGGAGGTTAATAAAA+TGG | + | chr1_1:49211520-49211539 | Msa0025740:CDS | 35.0% | |
| TAATACATCGGAGCTTGTAT+CGG | - | chr1_1:49211557-49211576 | None:intergenic | 35.0% | |
| GCTCCGATGTATTATTATGA+AGG | + | chr1_1:49211563-49211582 | Msa0025740:CDS | 35.0% | |
| AAGTAGTAACTATGCTGGTA+TGG | + | chr1_1:49211589-49211608 | Msa0025740:CDS | 35.0% | |
| GATCAATTTCATCATCAACC+TGG | + | chr1_1:49211611-49211630 | Msa0025740:CDS | 35.0% | |
| GGGTATATGAATATGAACCA+TGG | + | chr1_1:49211680-49211699 | Msa0025740:CDS | 35.0% | |
| GAGTGTGTATACATTATGCA+CGG | + | chr1_1:49211825-49211844 | Msa0025740:three_prime_UTR | 35.0% | |
| TTTCTCTTACAAATCTGGAC+AGG | - | chr1_1:49212043-49212062 | None:intergenic | 35.0% | |
| ! | CCATGTGTGTGATTGGTAAT+AGG | - | chr1_1:49210214-49210233 | None:intergenic | 40.0% |
| CCTATTACCAATCACACACA+TGG | + | chr1_1:49210211-49210230 | Msa0025740:exon | 40.0% | |
| TCCTTCATCAGCTTTCTTCT+CGG | - | chr1_1:49210400-49210419 | None:intergenic | 40.0% | |
| AGTTTGTAAACAACAGGAGC+AGG | - | chr1_1:49210453-49210472 | None:intergenic | 40.0% | |
| GGCTGAGAAAGCAAAGAAAA+AGG | + | chr1_1:49210708-49210727 | Msa0025740:CDS | 40.0% | |
| AAGATCAGATTGCACTGTGA+CGG | + | chr1_1:49210989-49211008 | Msa0025740:CDS | 40.0% | |
| GGTAACAGTGAAAGGAACAA+TGG | + | chr1_1:49211328-49211347 | Msa0025740:CDS | 40.0% | |
| GAAAGGAACAATGGAACCAA+AGG | + | chr1_1:49211337-49211356 | Msa0025740:CDS | 40.0% | |
| GAGAAGAAAGAAAAAGAGGG+TGG | + | chr1_1:49211428-49211447 | Msa0025740:CDS | 40.0% | |
| AAGAAAGAAAAAGAGGGTGG+AGG | + | chr1_1:49211431-49211450 | Msa0025740:CDS | 40.0% | |
| GGTCAAAGTAGTAACTATGC+TGG | + | chr1_1:49211584-49211603 | Msa0025740:CDS | 40.0% | |
| TTTCATCATCAACCTGGGTA+TGG | + | chr1_1:49211617-49211636 | Msa0025740:CDS | 40.0% | |
| ATGAATATGAACCATGGTGG+TGG | + | chr1_1:49211686-49211705 | Msa0025740:CDS | 40.0% | |
| ATGTAATACGGTACTTGAGG+TGG | - | chr1_1:49211725-49211744 | None:intergenic | 40.0% | |
| TGCATGTAATACGGTACTTG+AGG | - | chr1_1:49211728-49211747 | None:intergenic | 40.0% | |
| !! | TCTGAGGAGGTGGATTATTA+GGG | - | chr1_1:49211751-49211770 | None:intergenic | 40.0% |
| !! | ATCTGAGGAGGTGGATTATT+AGG | - | chr1_1:49211752-49211771 | None:intergenic | 40.0% |
| TTCTCATCACTGAACATCTG+AGG | - | chr1_1:49211767-49211786 | None:intergenic | 40.0% | |
| CACATGAGAGAACAAGCATT+GGG | - | chr1_1:49211791-49211810 | None:intergenic | 40.0% | |
| TCACATGAGAGAACAAGCAT+TGG | - | chr1_1:49211792-49211811 | None:intergenic | 40.0% | |
| ! | CCATGTGTGTGATTGGTAAT+AGG | - | chr1_1:49210214-49210233 | None:intergenic | 40.0% |
| CCTATTACCAATCACACACA+TGG | + | chr1_1:49210211-49210230 | Msa0025740:exon | 40.0% | |
| TCCTTCATCAGCTTTCTTCT+CGG | - | chr1_1:49210400-49210419 | None:intergenic | 40.0% | |
| AGTTTGTAAACAACAGGAGC+AGG | - | chr1_1:49210453-49210472 | None:intergenic | 40.0% | |
| GGCTGAGAAAGCAAAGAAAA+AGG | + | chr1_1:49210708-49210727 | Msa0025740:CDS | 40.0% | |
| AAGATCAGATTGCACTGTGA+CGG | + | chr1_1:49210989-49211008 | Msa0025740:CDS | 40.0% | |
| GGTAACAGTGAAAGGAACAA+TGG | + | chr1_1:49211328-49211347 | Msa0025740:CDS | 40.0% | |
| GAAAGGAACAATGGAACCAA+AGG | + | chr1_1:49211337-49211356 | Msa0025740:CDS | 40.0% | |
| GAGAAGAAAGAAAAAGAGGG+TGG | + | chr1_1:49211428-49211447 | Msa0025740:CDS | 40.0% | |
| AAGAAAGAAAAAGAGGGTGG+AGG | + | chr1_1:49211431-49211450 | Msa0025740:CDS | 40.0% | |
| GGTCAAAGTAGTAACTATGC+TGG | + | chr1_1:49211584-49211603 | Msa0025740:CDS | 40.0% | |
| TTTCATCATCAACCTGGGTA+TGG | + | chr1_1:49211617-49211636 | Msa0025740:CDS | 40.0% | |
| ATGAATATGAACCATGGTGG+TGG | + | chr1_1:49211686-49211705 | Msa0025740:CDS | 40.0% | |
| ATGTAATACGGTACTTGAGG+TGG | - | chr1_1:49211725-49211744 | None:intergenic | 40.0% | |
| TGCATGTAATACGGTACTTG+AGG | - | chr1_1:49211728-49211747 | None:intergenic | 40.0% | |
| !! | TCTGAGGAGGTGGATTATTA+GGG | - | chr1_1:49211751-49211770 | None:intergenic | 40.0% |
| !! | ATCTGAGGAGGTGGATTATT+AGG | - | chr1_1:49211752-49211771 | None:intergenic | 40.0% |
| TTCTCATCACTGAACATCTG+AGG | - | chr1_1:49211767-49211786 | None:intergenic | 40.0% | |
| CACATGAGAGAACAAGCATT+GGG | - | chr1_1:49211791-49211810 | None:intergenic | 40.0% | |
| TCACATGAGAGAACAAGCAT+TGG | - | chr1_1:49211792-49211811 | None:intergenic | 40.0% | |
| !! | GTGAGGTAATGGGATTGGTT+AGG | - | chr1_1:49210077-49210096 | None:intergenic | 45.0% |
| ! | GAGTGGGGAGAGAAGTATAA+GGG | - | chr1_1:49210131-49210150 | None:intergenic | 45.0% |
| ! | AGAGTGGGGAGAGAAGTATA+AGG | - | chr1_1:49210132-49210151 | None:intergenic | 45.0% |
| ACCGAGAAGAAAGCTGATGA+AGG | + | chr1_1:49210396-49210415 | Msa0025740:CDS | 45.0% | |
| !!! | TTTTTTCTCCGCCGGTTTCT+CGG | - | chr1_1:49210773-49210792 | None:intergenic | 45.0% |
| CCAAATCCTTGTCTCCATCT+AGG | - | chr1_1:49211310-49211329 | None:intergenic | 45.0% | |
| CCTAGATGGAGACAAGGATT+TGG | + | chr1_1:49211307-49211326 | Msa0025740:CDS | 45.0% | |
| TTATAACCACCACCATACCC+AGG | - | chr1_1:49211632-49211651 | None:intergenic | 45.0% | |
| TCATCACTGAACATCTGAGG+AGG | - | chr1_1:49211764-49211783 | None:intergenic | 45.0% | |
| ! | AAGTATTAGACTGGCTCAGC+TGG | + | chr1_1:49212008-49212027 | Msa0025740:three_prime_UTR | 45.0% |
| !! | GTGAGGTAATGGGATTGGTT+AGG | - | chr1_1:49210077-49210096 | None:intergenic | 45.0% |
| ! | GAGTGGGGAGAGAAGTATAA+GGG | - | chr1_1:49210131-49210150 | None:intergenic | 45.0% |
| ! | AGAGTGGGGAGAGAAGTATA+AGG | - | chr1_1:49210132-49210151 | None:intergenic | 45.0% |
| ACCGAGAAGAAAGCTGATGA+AGG | + | chr1_1:49210396-49210415 | Msa0025740:CDS | 45.0% | |
| !!! | TTTTTTCTCCGCCGGTTTCT+CGG | - | chr1_1:49210773-49210792 | None:intergenic | 45.0% |
| CCAAATCCTTGTCTCCATCT+AGG | - | chr1_1:49211310-49211329 | None:intergenic | 45.0% | |
| CCTAGATGGAGACAAGGATT+TGG | + | chr1_1:49211307-49211326 | Msa0025740:CDS | 45.0% | |
| TTATAACCACCACCATACCC+AGG | - | chr1_1:49211632-49211651 | None:intergenic | 45.0% | |
| TCATCACTGAACATCTGAGG+AGG | - | chr1_1:49211764-49211783 | None:intergenic | 45.0% | |
| ! | AAGTATTAGACTGGCTCAGC+TGG | + | chr1_1:49212008-49212027 | Msa0025740:three_prime_UTR | 45.0% |
| !!! | TTTTAAAATATTAATGAATT+AGG | - | chr1_1:49211088-49211107 | None:intergenic | 5.0% |
| !! | TAATTAATTAATTGTTAATT+TGG | + | chr1_1:49211245-49211264 | Msa0025740:intron | 5.0% |
| !!! | TTTTAAAATATTAATGAATT+AGG | - | chr1_1:49211088-49211107 | None:intergenic | 5.0% |
| !! | TAATTAATTAATTGTTAATT+TGG | + | chr1_1:49211245-49211264 | Msa0025740:intron | 5.0% |
| GAAACGGTGGGTGAGGTAAT+GGG | - | chr1_1:49210087-49210106 | None:intergenic | 50.0% | |
| TGAAACGGTGGGTGAGGTAA+TGG | - | chr1_1:49210088-49210107 | None:intergenic | 50.0% | |
| TACCTCACCCACCGTTTCAT+TGG | + | chr1_1:49210089-49210108 | Msa0025740:five_prime_UTR | 50.0% | |
| AACCAATGAAACGGTGGGTG+AGG | - | chr1_1:49210094-49210113 | None:intergenic | 50.0% | |
| ! | GGGAGAGAAGTATAAGGGAG+AGG | - | chr1_1:49210126-49210145 | None:intergenic | 50.0% |
| ACCAATCACACACATGGGAG+AGG | + | chr1_1:49210217-49210236 | Msa0025740:exon | 50.0% | |
| ACCTCTCCCATGTGTGTGAT+TGG | - | chr1_1:49210221-49210240 | None:intergenic | 50.0% | |
| TAAACAACAGGAGCAGGAGC+AGG | - | chr1_1:49210447-49210466 | None:intergenic | 50.0% | |
| !!! | TCGTCGGATTTTTTCTCCGC+CGG | - | chr1_1:49210781-49210800 | None:intergenic | 50.0% |
| ATCCGACGAGAAAAAACCGG+AGG | + | chr1_1:49210792-49210811 | Msa0025740:CDS | 50.0% | |
| !!! | CTCCTCCGGTTTTTTCTCGT+CGG | - | chr1_1:49210797-49210816 | None:intergenic | 50.0% |
| TCCTCAGCTTTCTTCTCCTC+CGG | - | chr1_1:49210811-49210830 | None:intergenic | 50.0% | |
| GTTGAAACGGCGAACCTAGA+TGG | + | chr1_1:49211293-49211312 | Msa0025740:CDS | 50.0% | |
| GAAGAGAAGAAAGTGGACGG+TGG | + | chr1_1:49211488-49211507 | Msa0025740:CDS | 50.0% | |
| CATCATCAACCTGGGTATGG+TGG | + | chr1_1:49211620-49211639 | Msa0025740:CDS | 50.0% | |
| GCATAGGATAACCACCACCA+TGG | - | chr1_1:49211700-49211719 | None:intergenic | 50.0% | |
| TCACTGAACATCTGAGGAGG+TGG | - | chr1_1:49211761-49211780 | None:intergenic | 50.0% | |
| GAAACGGTGGGTGAGGTAAT+GGG | - | chr1_1:49210087-49210106 | None:intergenic | 50.0% | |
| TGAAACGGTGGGTGAGGTAA+TGG | - | chr1_1:49210088-49210107 | None:intergenic | 50.0% | |
| TACCTCACCCACCGTTTCAT+TGG | + | chr1_1:49210089-49210108 | Msa0025740:five_prime_UTR | 50.0% | |
| AACCAATGAAACGGTGGGTG+AGG | - | chr1_1:49210094-49210113 | None:intergenic | 50.0% | |
| ! | GGGAGAGAAGTATAAGGGAG+AGG | - | chr1_1:49210126-49210145 | None:intergenic | 50.0% |
| ACCAATCACACACATGGGAG+AGG | + | chr1_1:49210217-49210236 | Msa0025740:exon | 50.0% | |
| ACCTCTCCCATGTGTGTGAT+TGG | - | chr1_1:49210221-49210240 | None:intergenic | 50.0% | |
| TAAACAACAGGAGCAGGAGC+AGG | - | chr1_1:49210447-49210466 | None:intergenic | 50.0% | |
| !!! | TCGTCGGATTTTTTCTCCGC+CGG | - | chr1_1:49210781-49210800 | None:intergenic | 50.0% |
| ATCCGACGAGAAAAAACCGG+AGG | + | chr1_1:49210792-49210811 | Msa0025740:CDS | 50.0% | |
| !!! | CTCCTCCGGTTTTTTCTCGT+CGG | - | chr1_1:49210797-49210816 | None:intergenic | 50.0% |
| TCCTCAGCTTTCTTCTCCTC+CGG | - | chr1_1:49210811-49210830 | None:intergenic | 50.0% | |
| GTTGAAACGGCGAACCTAGA+TGG | + | chr1_1:49211293-49211312 | Msa0025740:CDS | 50.0% | |
| GAAGAGAAGAAAGTGGACGG+TGG | + | chr1_1:49211488-49211507 | Msa0025740:CDS | 50.0% | |
| CATCATCAACCTGGGTATGG+TGG | + | chr1_1:49211620-49211639 | Msa0025740:CDS | 50.0% | |
| GCATAGGATAACCACCACCA+TGG | - | chr1_1:49211700-49211719 | None:intergenic | 50.0% | |
| TCACTGAACATCTGAGGAGG+TGG | - | chr1_1:49211761-49211780 | None:intergenic | 50.0% | |
| !! | GGTGGGTGAGGTAATGGGAT+TGG | - | chr1_1:49210082-49210101 | None:intergenic | 55.0% |
| ! | CGAAGTGCTCGTCATTTCGC+TGG | + | chr1_1:49210510-49210529 | Msa0025740:CDS | 55.0% |
| CCACCGCCAAAAAAAGACGC+CGG | + | chr1_1:49210745-49210764 | Msa0025740:CDS | 55.0% | |
| !!! | GCTCCGGCGTCTTTTTTTGG+CGG | - | chr1_1:49210751-49210770 | None:intergenic | 55.0% |
| !!! | TCGGCTCCGGCGTCTTTTTT+TGG | - | chr1_1:49210754-49210773 | None:intergenic | 55.0% |
| ACCGGAGGAGAAGAAAGCTG+AGG | + | chr1_1:49210807-49210826 | Msa0025740:CDS | 55.0% | |
| GGCGAACCTAGATGGAGACA+AGG | + | chr1_1:49211301-49211320 | Msa0025740:CDS | 55.0% | |
| GAAAGTGGACGGTGGAGATG+CGG | + | chr1_1:49211496-49211515 | Msa0025740:CDS | 55.0% | |
| CATCAACCTGGGTATGGTGG+TGG | + | chr1_1:49211623-49211642 | Msa0025740:CDS | 55.0% | |
| GGTACTTGAGGTGGCTGCAT+AGG | - | chr1_1:49211716-49211735 | None:intergenic | 55.0% | |
| ! | ATTAGACTGGCTCAGCTGGC+TGG | + | chr1_1:49212012-49212031 | Msa0025740:three_prime_UTR | 55.0% |
| !! | GGTGGGTGAGGTAATGGGAT+TGG | - | chr1_1:49210082-49210101 | None:intergenic | 55.0% |
| ! | CGAAGTGCTCGTCATTTCGC+TGG | + | chr1_1:49210510-49210529 | Msa0025740:CDS | 55.0% |
| CCACCGCCAAAAAAAGACGC+CGG | + | chr1_1:49210745-49210764 | Msa0025740:CDS | 55.0% | |
| !!! | GCTCCGGCGTCTTTTTTTGG+CGG | - | chr1_1:49210751-49210770 | None:intergenic | 55.0% |
| !!! | TCGGCTCCGGCGTCTTTTTT+TGG | - | chr1_1:49210754-49210773 | None:intergenic | 55.0% |
| ACCGGAGGAGAAGAAAGCTG+AGG | + | chr1_1:49210807-49210826 | Msa0025740:CDS | 55.0% | |
| GGCGAACCTAGATGGAGACA+AGG | + | chr1_1:49211301-49211320 | Msa0025740:CDS | 55.0% | |
| GAAAGTGGACGGTGGAGATG+CGG | + | chr1_1:49211496-49211515 | Msa0025740:CDS | 55.0% | |
| CATCAACCTGGGTATGGTGG+TGG | + | chr1_1:49211623-49211642 | Msa0025740:CDS | 55.0% | |
| GGTACTTGAGGTGGCTGCAT+AGG | - | chr1_1:49211716-49211735 | None:intergenic | 55.0% | |
| ! | ATTAGACTGGCTCAGCTGGC+TGG | + | chr1_1:49212012-49212031 | Msa0025740:three_prime_UTR | 55.0% |
| ACAGGAGCAGGAGCAGGAAC+AGG | - | chr1_1:49210441-49210460 | None:intergenic | 60.0% | |
| !!! | CCGGCGTCTTTTTTTGGCGG+TGG | - | chr1_1:49210748-49210767 | None:intergenic | 60.0% |
| ACAGGAGCAGGAGCAGGAAC+AGG | - | chr1_1:49210441-49210460 | None:intergenic | 60.0% | |
| !!! | CCGGCGTCTTTTTTTGGCGG+TGG | - | chr1_1:49210748-49210767 | None:intergenic | 60.0% |
| AGACGCCGGAGCCGAGAAAC+CGG | + | chr1_1:49210759-49210778 | Msa0025740:CDS | 65.0% | |
| TGGAGATGCGGCGAAGGTGG+AGG | + | chr1_1:49211508-49211527 | Msa0025740:CDS | 65.0% | |
| AGACGCCGGAGCCGAGAAAC+CGG | + | chr1_1:49210759-49210778 | Msa0025740:CDS | 65.0% | |
| TGGAGATGCGGCGAAGGTGG+AGG | + | chr1_1:49211508-49211527 | Msa0025740:CDS | 65.0% | |
| !! | CTCCGCCGGTTTCTCGGCTC+CGG | - | chr1_1:49210767-49210786 | None:intergenic | 70.0% |
| GGACGGTGGAGATGCGGCGA+AGG | + | chr1_1:49211502-49211521 | Msa0025740:CDS | 70.0% | |
| CGGTGGAGATGCGGCGAAGG+TGG | + | chr1_1:49211505-49211524 | Msa0025740:CDS | 70.0% | |
| !! | CTCCGCCGGTTTCTCGGCTC+CGG | - | chr1_1:49210767-49210786 | None:intergenic | 70.0% |
| GGACGGTGGAGATGCGGCGA+AGG | + | chr1_1:49211502-49211521 | Msa0025740:CDS | 70.0% | |
| CGGTGGAGATGCGGCGAAGG+TGG | + | chr1_1:49211505-49211524 | Msa0025740:CDS | 70.0% | |
| CGCCGGAGCCGAGAAACCGG+CGG | + | chr1_1:49210762-49210781 | Msa0025740:CDS | 75.0% | |
| CGCCGGAGCCGAGAAACCGG+CGG | + | chr1_1:49210762-49210781 | Msa0025740:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 49210074 | 49212196 | 49210074 | ID=Msa0025740;Name=Msa0025740 |
| chr1_1 | mRNA | 49210074 | 49212196 | 49210074 | ID=Msa0025740-mRNA-1;Parent=Msa0025740;Name=Msa0025740-mRNA-1;_AED=0.01;_eAED=0.01;_QI=156|1|1|1|1|1|5|385|336 |
| chr1_1 | exon | 49210074 | 49210238 | 49210074 | ID=Msa0025740-mRNA-1:exon:14205;Parent=Msa0025740-mRNA-1 |
| chr1_1 | exon | 49210384 | 49210531 | 49210384 | ID=Msa0025740-mRNA-1:exon:14206;Parent=Msa0025740-mRNA-1 |
| chr1_1 | exon | 49210623 | 49210876 | 49210623 | ID=Msa0025740-mRNA-1:exon:14207;Parent=Msa0025740-mRNA-1 |
| chr1_1 | exon | 49210974 | 49211052 | 49210974 | ID=Msa0025740-mRNA-1:exon:14208;Parent=Msa0025740-mRNA-1 |
| chr1_1 | exon | 49211291 | 49212196 | 49211291 | ID=Msa0025740-mRNA-1:exon:14209;Parent=Msa0025740-mRNA-1 |
| chr1_1 | five_prime_UTR | 49210074 | 49210229 | 49210074 | ID=Msa0025740-mRNA-1:five_prime_utr;Parent=Msa0025740-mRNA-1 |
| chr1_1 | CDS | 49210230 | 49210238 | 49210230 | ID=Msa0025740-mRNA-1:cds;Parent=Msa0025740-mRNA-1 |
| chr1_1 | CDS | 49210384 | 49210531 | 49210384 | ID=Msa0025740-mRNA-1:cds;Parent=Msa0025740-mRNA-1 |
| chr1_1 | CDS | 49210623 | 49210876 | 49210623 | ID=Msa0025740-mRNA-1:cds;Parent=Msa0025740-mRNA-1 |
| chr1_1 | CDS | 49210974 | 49211052 | 49210974 | ID=Msa0025740-mRNA-1:cds;Parent=Msa0025740-mRNA-1 |
| chr1_1 | CDS | 49211291 | 49211811 | 49211291 | ID=Msa0025740-mRNA-1:cds;Parent=Msa0025740-mRNA-1 |
| chr1_1 | three_prime_UTR | 49211812 | 49212196 | 49211812 | ID=Msa0025740-mRNA-1:three_prime_utr;Parent=Msa0025740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
