AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0455040


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0455040 MtrunA17_Chr3g0101501 74.528 530 70 5 1 516 1 479 0.0 693
Msa0455040 MtrunA17_Chr3g0101501 38.677 393 177 10 42 400 161 523 1.22e-50 185
Msa0455040 MtrunA17_Chr3g0101501 89.157 83 9 0 587 669 491 573 1.98e-27 117
Msa0455040 MtrunA17_Chr3g0101561 55.556 171 47 5 1 155 1 158 3.67e-31 122
Msa0455040 MtrunA17_Chr3g0101551 49.708 171 58 4 1 156 1 158 1.16e-26 107
Msa0455040 MtrunA17_Chr3g0101531 52.586 116 35 2 12 116 24 130 1.88e-21 90.9
Msa0455040 MtrunA17_Chr3g0101511 53.774 106 38 1 22 116 1 106 8.27e-18 79.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 217 sgRNAs with CRISPR-Local

Find 577 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAGGAGTAATGGGGAATT+AGG 0.182122 3_3:-47246330 Msa0455040:CDS
AAGAGGTAAAACCATCTAAT+TGG 0.236209 3_3:+47243437 None:intergenic
AGATGAAAACGTTGAGGTTT+TGG 0.237410 3_3:-47245625 Msa0455040:CDS
GCACCGGTCCAATACCATTT+TGG 0.247957 3_3:+47243405 None:intergenic
ATATTAACTGTTACTTATAT+AGG 0.254676 3_3:-47242232 Msa0455040:CDS
ATTATCAATGCCCTGTTAAA+TGG 0.264026 3_3:-47239731 Msa0455040:three_prime_UTR
ACAAAAGTTTGCCATTTAAC+AGG 0.265206 3_3:+47239720 None:intergenic
GGTAATGGGCTTGGATTAAA+TGG 0.276370 3_3:-47245429 Msa0455040:CDS
GTGAGGAGTTGGTAAAGTTT+AGG 0.285312 3_3:-47244299 Msa0455040:CDS
AGCTGCAACATTGGATATCT+TGG 0.290276 3_3:-47240032 Msa0455040:CDS
TGAGGAGTTGGTAAAGTTTA+GGG 0.291130 3_3:-47244298 Msa0455040:CDS
TGTTGGAAAGGTCGAGGTTT+TGG 0.292214 3_3:-47245301 Msa0455040:CDS
AAAGATTCTCTAGGTTCTTC+TGG 0.293921 3_3:-47245243 Msa0455040:intron
CTAGGTATATAGAGCAGAAT+AGG 0.299651 3_3:-47239810 Msa0455040:three_prime_UTR
AGATATTCTGTTTCTTCTCT+TGG 0.301182 3_3:-47240058 Msa0455040:CDS
CTCAATGTACCGCTCCAATT+TGG 0.304740 3_3:+47243315 None:intergenic
AGAATAGAGGGGTTGGTAAT+GGG 0.305592 3_3:-47245350 Msa0455040:CDS
TAAAGGAAGAAAGGAGTAAT+GGG 0.312608 3_3:-47246338 Msa0455040:CDS
GGCTTGTGCTGCTGCAGAAC+TGG 0.321860 3_3:-47245325 Msa0455040:CDS
GCTAGGGAAGAAAAGTTAAA+AGG 0.323691 3_3:-47246459 Msa0455040:CDS
AAAGATGGCGTAGGTGCTTC+AGG 0.332452 3_3:-47246168 Msa0455040:intron
CTCTTCAAACCTAACCAAAA+TGG 0.334109 3_3:-47243419 Msa0455040:CDS
GTTTCGTGTGGTGGTGGTGG+TGG 0.338025 3_3:-47246255 Msa0455040:CDS
AGGAAATTGAAGAGAAGATT+AGG 0.342554 3_3:-47244407 Msa0455040:CDS
AGAGGAACTGGAACTAGAAT+TGG 0.346298 3_3:+47239979 None:intergenic
TGGCCAAGACTCTAGTGGTT+AGG 0.349610 3_3:-47245605 Msa0455040:CDS
TAGACGAGACGCTAGTGGTT+AGG 0.352615 3_3:-47245839 Msa0455040:CDS
GAATAATCAATTCAAGGGTT+GGG 0.353768 3_3:-47245532 Msa0455040:CDS
GAATGTCTTGAAAGCTGAAT+TGG 0.366498 3_3:-47244244 Msa0455040:CDS
GGAACACTTGTGCGACCATA+TGG 0.366637 3_3:-47242265 Msa0455040:CDS
AGGAAGGGTAAACAAAGTTT+TGG 0.369273 3_3:-47239786 Msa0455040:three_prime_UTR
AAAGGAGTAATGGGGAATTA+GGG 0.373435 3_3:-47246329 Msa0455040:CDS
AGCAAGATGTTGAACCAAAT+TGG 0.374669 3_3:-47243329 Msa0455040:CDS
AGTAACAGTTAATATTGAAC+TGG 0.379151 3_3:+47242240 None:intergenic
GAAATTTGATATGTTAATGT+TGG 0.381296 3_3:-47246394 Msa0455040:CDS
ATTACCAGTCTATTTACCTT+TGG 0.381583 3_3:+47239897 None:intergenic
CTTTGCTTCCCTGTCCCCTA+AGG 0.392415 3_3:+47244437 None:intergenic
CACCTGCAGCTCCAATTAGA+TGG 0.394345 3_3:-47243448 Msa0455040:intron
GTGGAGAATGGTAATGGGCT+TGG 0.402569 3_3:-47245438 Msa0455040:CDS
AAGAATCAATTTAAGAGCTT+GGG 0.403381 3_3:-47244372 Msa0455040:CDS
GAAAGGAGATTATGAAGCTT+GGG 0.403692 3_3:-47245692 Msa0455040:CDS
TGGAAGGTGTAGTGGTGAAG+TGG 0.405749 3_3:-47246304 Msa0455040:CDS
TGATATGTTAATGTTGGAAA+AGG 0.406052 3_3:-47246388 Msa0455040:CDS
AGAAGAGAAAGGTTGGTAAT+GGG 0.408122 3_3:-47246278 Msa0455040:CDS
AAACCTAACCAAAATGGTAT+TGG 0.415009 3_3:-47243413 Msa0455040:CDS
GAAGAATCAATTTAAGAGCT+TGG 0.416264 3_3:-47244373 Msa0455040:CDS
TATTTACCTTTGGCTGCCAT+TGG 0.417441 3_3:+47239907 None:intergenic
AAGAATAGAGGGGTTGGTAA+TGG 0.418976 3_3:-47245351 Msa0455040:CDS
CATGTGTCATTTCAGATACT+GGG 0.419560 3_3:-47240153 Msa0455040:intron
GACCGGACGATTGGCGGAAC+CGG 0.421193 3_3:-47246578 Msa0455040:CDS
GAATAGTCGATTCAAGAGTT+GGG 0.423182 3_3:-47245766 Msa0455040:CDS
GTACATTCGCTTCACGCTCA+TGG 0.423701 3_3:-47246631 Msa0455040:exon
CCTAGAGAATCTTTCTTGCC+TGG 0.427372 3_3:+47245252 None:intergenic
GGCCAAGACTCTAGTGGTTA+GGG 0.427558 3_3:-47245604 Msa0455040:CDS
ATAGAGCAGAATAGGGAGGA+AGG 0.427778 3_3:-47239802 Msa0455040:three_prime_UTR
CTCCGGTTCCGCCAATCGTC+CGG 0.428014 3_3:+47246576 None:intergenic
AGTAATGGGGAATTAGGGTT+TGG 0.430269 3_3:-47246324 Msa0455040:CDS
AGAATAATCAATTCAAGGGT+TGG 0.430618 3_3:-47245533 Msa0455040:CDS
GGAAAAGGTTAGTGTTGAAA+TGG 0.431642 3_3:-47246373 Msa0455040:CDS
TTTGAGGGGTTGAAGAATAG+AGG 0.435861 3_3:-47245363 Msa0455040:CDS
AACAGATTTGTTGGTGAACC+AGG 0.436737 3_3:-47245270 Msa0455040:CDS
AAGAAACTTTGCAACAAAAC+CGG 0.438112 3_3:-47240104 Msa0455040:CDS
AAATTCTTCAGAAGAGGAAC+TGG 0.438877 3_3:+47239967 None:intergenic
AATGTCTTGAAAGCTGAATT+GGG 0.440423 3_3:-47244243 Msa0455040:CDS
AGAATAGTCGATTCAAGAGT+TGG 0.440860 3_3:-47245767 Msa0455040:CDS
AGCAAACCTTGCAACAAGAT+TGG 0.440924 3_3:-47244508 Msa0455040:CDS
GGGGTTTCGTGTGGTGGTGG+TGG 0.441901 3_3:-47246258 Msa0455040:CDS
GGTAATGGGGTTTCGTGTGG+TGG 0.444977 3_3:-47246264 Msa0455040:CDS
TCAACAGTGAAGAGCCCTTA+GGG 0.445007 3_3:-47244452 Msa0455040:CDS
AAGAATAGTGGGGATGTTGA+TGG 0.446678 3_3:-47244192 Msa0455040:CDS
CTTGAGGTGGTGAAGAATAG+TGG 0.446970 3_3:-47244204 Msa0455040:CDS
TGAAGAGAGTAAAGGAAGAA+AGG 0.448784 3_3:-47246347 Msa0455040:CDS
AATATTGAACTGGGCCCATA+TGG 0.453077 3_3:+47242250 None:intergenic
ATTGAGGTGTTGAAGAATAG+AGG 0.455489 3_3:-47245651 Msa0455040:CDS
GCTGCAGTTGGGCACGCAAA+AGG 0.455909 3_3:-47245390 Msa0455040:CDS
AATGGGGTTTCGTGTGGTGG+TGG 0.456149 3_3:-47246261 Msa0455040:CDS
TCTTGGATTAGCTGCAACAT+TGG 0.456732 3_3:-47240041 Msa0455040:CDS
GTAAAGGAAGAAAGGAGTAA+TGG 0.457933 3_3:-47246339 Msa0455040:CDS
AGCTCCGAGATACGTTTATA+AGG 0.459337 3_3:-47246515 Msa0455040:CDS
ACAAGAGAATAATCAATTCA+AGG 0.461179 3_3:-47245538 Msa0455040:CDS
ATAGACTGGTAATATTAGAT+AGG 0.461403 3_3:-47239887 Msa0455040:three_prime_UTR
AGGTGAAAATGTCAAGGATT+CGG 0.464930 3_3:-47244142 Msa0455040:CDS
CTCATGAAGGTTGTGGAGAA+TGG 0.465265 3_3:-47245450 Msa0455040:CDS
TTGAAGAAACCCTAATTGCT+AGG 0.467341 3_3:-47246476 Msa0455040:CDS
GATGGGGAGGCTTGTGCTGT+TGG 0.469416 3_3:-47244174 Msa0455040:CDS
AGTTTAGGGAGAATAGTAAT+GGG 0.476515 3_3:-47244284 Msa0455040:CDS
GTGAAGAGCCCTTAGGGGAC+AGG 0.479138 3_3:-47244446 Msa0455040:CDS
GTGAAGGAAAAGAGAGGGGT+TGG 0.479471 3_3:-47246204 Msa0455040:CDS
GAATAGAGGGGTTGGTAATG+GGG 0.480773 3_3:-47245349 Msa0455040:CDS
AGACGAGACGCTAGTGGTTA+GGG 0.483500 3_3:-47245838 Msa0455040:CDS
TTGAGGTGGTGAAGAATAGT+GGG 0.483995 3_3:-47244203 Msa0455040:CDS
AGAATAGTGGGGATGTTGAT+GGG 0.484279 3_3:-47244191 Msa0455040:CDS
ACTGGAACTAGAATTGGAAC+TGG 0.488836 3_3:+47239985 None:intergenic
GGAAAGGAGATTATGAAGCT+TGG 0.489264 3_3:-47245693 Msa0455040:CDS
CACGCAAAAGGCAAATTTGA+GGG 0.490257 3_3:-47245378 Msa0455040:CDS
GGAAGGTGTAGTGGTGAAGT+GGG 0.491846 3_3:-47246303 Msa0455040:CDS
GTGGGGAAGAAGAGAAAGGT+TGG 0.493367 3_3:-47246285 Msa0455040:CDS
TTGAGGGGTTGAAGAATAGA+GGG 0.495709 3_3:-47245362 Msa0455040:CDS
AAAATTCTGCTCGGTTCAGC+CGG 0.496441 3_3:+47240085 None:intergenic
TAGGTATATAGAGCAGAATA+GGG 0.497565 3_3:-47239809 Msa0455040:three_prime_UTR
TTCCCTAACCACTAGAGTCT+TGG 0.500205 3_3:+47245602 None:intergenic
TGAAGACAGTCACGGGAGAA+AGG 0.502692 3_3:-47245485 Msa0455040:CDS
TTTGCTTCCCTGTCCCCTAA+GGG 0.502950 3_3:+47244438 None:intergenic
CAAGAGAATAATCAATTCAA+GGG 0.504303 3_3:-47245537 Msa0455040:CDS
AAGAAGAGAAAGGTTGGTAA+TGG 0.510838 3_3:-47246279 Msa0455040:CDS
TGAACACGGTCACGGGAGAA+AGG 0.520677 3_3:-47245719 Msa0455040:CDS
TAGAGCAGAATAGGGAGGAA+GGG 0.521716 3_3:-47239801 Msa0455040:three_prime_UTR
TGTTGCAAAGTTTCTTCGAA+CGG 0.521726 3_3:+47240111 None:intergenic
CTGACCTTATAAACGTATCT+CGG 0.522430 3_3:+47246511 None:intergenic
AATAATCAATTCAAGGGTTG+GGG 0.523511 3_3:-47245531 Msa0455040:CDS
GGTGATATTGATAAAGATGA+AGG 0.525847 3_3:-47242211 Msa0455040:intron
GTTGAGGCACAGAAAGTCAA+TGG 0.526558 3_3:-47244333 Msa0455040:CDS
GGAACCGGAGCAATCTGAAC+CGG 0.528517 3_3:-47246563 Msa0455040:CDS
TTCGGCTGAAAGGAAAAGAT+TGG 0.530262 3_3:-47244124 Msa0455040:CDS
AAAATTGACAGTGGTGTTTG+TGG 0.531387 3_3:-47243353 Msa0455040:CDS
ATCAACAGTGAAGAGCCCTT+AGG 0.531966 3_3:-47244453 Msa0455040:CDS
GTTGGTAATGGGGTTTCGTG+TGG 0.532209 3_3:-47246267 Msa0455040:CDS
TTAGGGTTTGGAAGGTGTAG+TGG 0.533992 3_3:-47246312 Msa0455040:CDS
TTGAGGTGTTGAAGAATAGA+GGG 0.534176 3_3:-47245650 Msa0455040:CDS
TTCTGCTCTATATACCTAGC+TGG 0.534478 3_3:+47239814 None:intergenic
AGCGGAGCTCATGAAGGTTG+TGG 0.535387 3_3:-47245457 Msa0455040:CDS
AAGGTTGTGGAGAATGGTAA+TGG 0.536654 3_3:-47245444 Msa0455040:CDS
AAGCAACTGAAGAGAAGTTG+AGG 0.536823 3_3:-47245800 Msa0455040:CDS
AAGTTTAGGGAGAATAGTAA+TGG 0.537330 3_3:-47244285 Msa0455040:CDS
GCTAACCACTCTTGAAGTCC+AGG 0.539468 3_3:-47243384 Msa0455040:CDS
GTTTAGCCAATCTTGTTGCA+AGG 0.541391 3_3:+47244502 None:intergenic
GAAATCAAATTCTTCAGAAG+AGG 0.543191 3_3:+47239961 None:intergenic
CAATTAGGGTTTCTTCAACA+AGG 0.543284 3_3:+47246481 None:intergenic
GAAGAGAAAGGTTGGTAATG+GGG 0.545155 3_3:-47246277 Msa0455040:CDS
TGAAGAAACCCTAATTGCTA+GGG 0.547195 3_3:-47246475 Msa0455040:CDS
CAAAAGTTTGCCATTTAACA+GGG 0.547218 3_3:+47239721 None:intergenic
AAACCCACTGATATAATGTC+AGG 0.550200 3_3:-47244483 Msa0455040:CDS
ATTGAGGTGAACACGGTCAC+GGG 0.550434 3_3:-47245726 Msa0455040:CDS
ATGGGGAATTAGGGTTTGGA+AGG 0.550708 3_3:-47246320 Msa0455040:CDS
AATGGAGCTGAAGAGAGTAA+AGG 0.551886 3_3:-47246355 Msa0455040:CDS
TGAAGAGCCCTTAGGGGACA+GGG 0.551919 3_3:-47244445 Msa0455040:CDS
GAAGGCAGCGGCTGAAGAGA+AGG 0.552001 3_3:-47245571 Msa0455040:CDS
GCAGCCAAAGGTAAATAGAC+TGG 0.552108 3_3:-47239901 Msa0455040:exon
GGTTAGGGAAGCAATGTTGA+AGG 0.552460 3_3:-47245589 Msa0455040:CDS
AGGTTGTGGAGAATGGTAAT+GGG 0.553988 3_3:-47245443 Msa0455040:CDS
AGAAGATTAGGTTACTGCAC+AGG 0.554303 3_3:-47244395 Msa0455040:CDS
AGAAAGGTGTGGTGAGGAGT+TGG 0.555115 3_3:-47244310 Msa0455040:CDS
TGAAGTGGGGAAGAAGAGAA+AGG 0.557805 3_3:-47246289 Msa0455040:CDS
CCACTAGCGTCTCGTCTACA+CGG 0.558048 3_3:+47245844 None:intergenic
TCTGAACCGGATGACGATCT+CGG 0.558116 3_3:-47246550 Msa0455040:CDS
ATTAGATAGGAAAACATACT+TGG 0.558413 3_3:-47239874 Msa0455040:three_prime_UTR
TTTGGTGAAGGAAAAGAGAG+GGG 0.558869 3_3:-47246208 Msa0455040:CDS
GCTGCTGCAGAACTGGATGT+TGG 0.558942 3_3:-47245318 Msa0455040:CDS
CACAGAAAGTCAATGGAGAA+AGG 0.559886 3_3:-47244326 Msa0455040:CDS
GGAAGCAATGTTGAAGGCAG+CGG 0.560044 3_3:-47245583 Msa0455040:CDS
GCTTGGATTAAATGGTGGAA+AGG 0.560127 3_3:-47245421 Msa0455040:CDS
TCAAGACATTCCCATCGTCT+AGG 0.560666 3_3:+47244256 None:intergenic
ATGTCAAGGATTCGGCTGAA+AGG 0.565218 3_3:-47244134 Msa0455040:CDS
TTACCTGACATTATATCAGT+GGG 0.567901 3_3:+47244480 None:intergenic
AACGGTTCGAAATTGGGCCG+CGG 0.568883 3_3:+47246606 None:intergenic
GAATAGTGGGGATGTTGATG+GGG 0.569033 3_3:-47244190 Msa0455040:CDS
AGCAACTGAAGAGAAGTTGA+GGG 0.571040 3_3:-47245799 Msa0455040:CDS
GCTGAAAGGAAAAGATTGGC+TGG 0.571500 3_3:-47244120 Msa0455040:intron
ACTGGATGTTGGAAAGGTCG+AGG 0.571508 3_3:-47245307 Msa0455040:CDS
GCACGCAAAAGGCAAATTTG+AGG 0.572379 3_3:-47245379 Msa0455040:CDS
CAGCGGCTGAAGAGAAGGTG+AGG 0.574750 3_3:-47245566 Msa0455040:CDS
ATCAATTCAAGGGTTGGGGA+AGG 0.578074 3_3:-47245527 Msa0455040:CDS
CCAGGCAAGAAAGATTCTCT+AGG 0.578477 3_3:-47245252 Msa0455040:CDS
CAATGGAGAAAGGTGTGGTG+AGG 0.579211 3_3:-47244316 Msa0455040:CDS
TAACCAAAATGGTATTGGAC+CGG 0.579693 3_3:-47243408 Msa0455040:CDS
ATTACCTGACATTATATCAG+TGG 0.580124 3_3:+47244479 None:intergenic
GGGTTGAAGAATAGAGGGGT+TGG 0.584413 3_3:-47245357 Msa0455040:CDS
GAACACTTGTGCGACCATAT+GGG 0.585280 3_3:-47242264 Msa0455040:CDS
CACGGGAGAAAGGCGTGAAG+CGG 0.587340 3_3:-47245475 Msa0455040:CDS
TAGTGGGGATGTTGATGGGG+AGG 0.587822 3_3:-47244187 Msa0455040:CDS
TGTGCTGTTGGTGAACTCAA+AGG 0.590371 3_3:-47244162 Msa0455040:CDS
CACGGGAGAAAGGCATGGAA+AGG 0.595177 3_3:-47245709 Msa0455040:CDS
CGAGCTCCGAGATCGTCATC+CGG 0.596071 3_3:+47246544 None:intergenic
AGGGGAAGATGAAAACGTTG+AGG 0.597128 3_3:-47245631 Msa0455040:CDS
GGACAGGGAAGCAAAGCTGA+AGG 0.599361 3_3:-47244430 Msa0455040:CDS
AGCGGCTGAAGAGAAGGTGA+GGG 0.600067 3_3:-47245565 Msa0455040:CDS
TGAGGGGTTGAAGAATAGAG+GGG 0.604683 3_3:-47245361 Msa0455040:CDS
GATTGAGGTGAACACGGTCA+CGG 0.604889 3_3:-47245727 Msa0455040:CDS
GAATGAAAGTCACAAGCTTG+AGG 0.606112 3_3:-47244220 Msa0455040:CDS
TGCTGCCTGGACTTCAAGAG+TGG 0.606394 3_3:+47243379 None:intergenic
GCGTGAAGCGGAGCTCATGA+AGG 0.606657 3_3:-47245463 Msa0455040:CDS
GGTGAACAAAGCAAGAAAGA+TGG 0.608942 3_3:-47246183 Msa0455040:CDS
TGCAGAACTGGATGTTGGAA+AGG 0.609620 3_3:-47245313 Msa0455040:CDS
TATAAACGTATCTCGGAGCT+CGG 0.614929 3_3:+47246518 None:intergenic
CCGTGTAGACGAGACGCTAG+TGG 0.616681 3_3:-47245844 Msa0455040:CDS
ACCTAGCTGGCATTTATCTG+TGG 0.617047 3_3:+47239827 None:intergenic
GTTGAGGTGAAGACAGTCAC+GGG 0.618797 3_3:-47245492 Msa0455040:CDS
AAAGGAAGAAAGGAGTAATG+GGG 0.619788 3_3:-47246337 Msa0455040:CDS
TGAGGTGTTGAAGAATAGAG+GGG 0.620528 3_3:-47245649 Msa0455040:CDS
AATAGTCGATTCAAGAGTTG+GGG 0.622504 3_3:-47245765 Msa0455040:CDS
TCATCCGGTTCAGATTGCTC+CGG 0.623468 3_3:+47246559 None:intergenic
ATGGGATTGACCTAGACGAT+GGG 0.627000 3_3:-47244266 Msa0455040:CDS
ACTCAAAGGTGAAAATGTCA+AGG 0.630430 3_3:-47244148 Msa0455040:CDS
ACCACAGATAAATGCCAGCT+AGG 0.631843 3_3:-47239828 Msa0455040:three_prime_UTR
CAGGGAAGCAAAGCTGAAGG+AGG 0.633850 3_3:-47244427 Msa0455040:CDS
ACTTCAAGAGTGGTTAGCAC+CGG 0.635036 3_3:+47243389 None:intergenic
TAGAGGGGTTGGTAATGGGG+AGG 0.638423 3_3:-47245346 Msa0455040:CDS
AAAGGAGATTATGAAGCTTG+GGG 0.639917 3_3:-47245691 Msa0455040:CDS
CAAAGCAAGAAAGATGGCGT+AGG 0.641054 3_3:-47246177 Msa0455040:CDS
ACGCAAAAGGCAAATTTGAG+GGG 0.643882 3_3:-47245377 Msa0455040:CDS
ACGGTCACGGGAGAAAGGCA+TGG 0.645476 3_3:-47245714 Msa0455040:CDS
AATGGGCTTGGATTAAATGG+TGG 0.645914 3_3:-47245426 Msa0455040:CDS
GAAGGTGTAGTGGTGAAGTG+GGG 0.652743 3_3:-47246302 Msa0455040:CDS
ATGTGTCATTTCAGATACTG+GGG 0.657968 3_3:-47240152 Msa0455040:intron
AATGGGATTGACCTAGACGA+TGG 0.661668 3_3:-47244267 Msa0455040:CDS
GTAACAGTTAATATTGAACT+GGG 0.663288 3_3:+47242241 None:intergenic
ATGTCTTGAAAGCTGAATTG+GGG 0.663640 3_3:-47244242 Msa0455040:CDS
GTATATAGAGCAGAATAGGG+AGG 0.666554 3_3:-47239806 Msa0455040:three_prime_UTR
TGAAAGTCACAAGCTTGAGG+TGG 0.671518 3_3:-47244217 Msa0455040:CDS
GGTTGAGGTGAAGACAGTCA+CGG 0.672238 3_3:-47245493 Msa0455040:CDS
AAAGTCAATGGAGAAAGGTG+TGG 0.681382 3_3:-47244321 Msa0455040:CDS
CAACAGTGAAGAGCCCTTAG+GGG 0.692780 3_3:-47244451 Msa0455040:CDS
GCTTCACGCTCATGGAACCG+CGG 0.699483 3_3:-47246623 Msa0455040:exon
GATGTTGAACCAAATTGGAG+CGG 0.700803 3_3:-47243324 Msa0455040:intron
ATTTAATTGCAGATACTGAG+CGG 0.710150 3_3:-47244554 Msa0455040:intron
TGAGGTGGTGAAGAATAGTG+GGG 0.725161 3_3:-47244202 Msa0455040:CDS
GCAGCAACTAAAATTGACAG+TGG 0.729128 3_3:-47243362 Msa0455040:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAACTTATCTTTTTATAT+AGG + chr3_3:47242422-47242441 None:intergenic 10.0%
!! AATATTAGAAATTAATCTTA+AGG - chr3_3:47242507-47242526 Msa0455040:intron 10.0%
!! ATATTAGAAATTAATCTTAA+GGG - chr3_3:47242508-47242527 Msa0455040:intron 10.0%
!! AAAATAAATCTAAAAAAATC+GGG - chr3_3:47243394-47243413 Msa0455040:CDS 10.0%
!!! AGATTATAATTTTTTTGAAA+GGG + chr3_3:47243673-47243692 None:intergenic 10.0%
!!! AAGATTATAATTTTTTTGAA+AGG + chr3_3:47243674-47243693 None:intergenic 10.0%
!! TTTAAAAAACAAGATTAAAT+AGG + chr3_3:47244537-47244556 None:intergenic 10.0%
!!! TTTTTTTTTTGCTTATAATT+TGG - chr3_3:47244764-47244783 Msa0455040:intron 10.0%
!!! TTTTTTTTTGCTTATAATTT+GGG - chr3_3:47244765-47244784 Msa0455040:intron 10.0%
!!! TTTCGATATATATATTTTAT+TGG + chr3_3:47244807-47244826 None:intergenic 10.0%
!! AAATAAAAAATGTTGAATTA+CGG + chr3_3:47244842-47244861 None:intergenic 10.0%
!! CTATTATATTTATATTTATG+TGG - chr3_3:47246075-47246094 Msa0455040:intron 10.0%
!! AATTAGTAGTTAAGTTATAT+TGG - chr3_3:47240461-47240480 Msa0455040:intron 15.0%
!! ATTAGTAGTTAAGTTATATT+GGG - chr3_3:47240462-47240481 Msa0455040:intron 15.0%
!!! TTTTTTATGTTTAAACCAAT+TGG - chr3_3:47240491-47240510 Msa0455040:intron 15.0%
!!! AAAATTAGCAATATTTTACA+AGG - chr3_3:47241735-47241754 Msa0455040:intron 15.0%
!!! AAATTAGCAATATTTTACAA+GGG - chr3_3:47241736-47241755 Msa0455040:intron 15.0%
!!! GTTTATCAAAATATCTTTTT+GGG + chr3_3:47242708-47242727 None:intergenic 15.0%
!! TAATAATTAAATTGTTCTTG+TGG + chr3_3:47242740-47242759 None:intergenic 15.0%
!! AAAAAAAACCCATATAAAAA+TGG + chr3_3:47243599-47243618 None:intergenic 15.0%
!!! ATTATAATTTTTTTGAAAGG+GGG + chr3_3:47243671-47243690 None:intergenic 15.0%
!!! GATTATAATTTTTTTGAAAG+GGG + chr3_3:47243672-47243691 None:intergenic 15.0%
!!! TGAAAGTTGAATTTTATTTA+TGG - chr3_3:47243772-47243791 Msa0455040:intron 15.0%
!!! ATATTAACTGTTACTTATAT+AGG - chr3_3:47244150-47244169 Msa0455040:CDS 15.0%
!! AAAACTAAAACATAAGAATT+TGG + chr3_3:47244725-47244744 None:intergenic 15.0%
!! GAACAAAAAAAAAATCTTAA+CGG - chr3_3:47245168-47245187 Msa0455040:intron 15.0%
!! AACAAAAAAAAAATCTTAAC+GGG - chr3_3:47245169-47245188 Msa0455040:intron 15.0%
!!! TATTTTATTGCATAACTTAA+TGG - chr3_3:47245566-47245585 Msa0455040:CDS 15.0%
!!! ATTTTATTGCATAACTTAAT+GGG - chr3_3:47245567-47245586 Msa0455040:CDS 15.0%
!!! TTCTTCTTTTTGTTTTTTAT+GGG + chr3_3:47245782-47245801 None:intergenic 15.0%
!!! TTTCTTCTTTTTGTTTTTTA+TGG + chr3_3:47245783-47245802 None:intergenic 15.0%
!! GAAATTTGATATGTTAATGT+TGG - chr3_3:47239988-47240007 Msa0455040:CDS 20.0%
!! TATTATTGAGTATGTATGTT+TGG - chr3_3:47240341-47240360 Msa0455040:intron 20.0%
!! TGATAATTCTTCATCAAATA+CGG + chr3_3:47240416-47240435 None:intergenic 20.0%
!! GAATGAAAAATACAAAATTG+AGG - chr3_3:47240715-47240734 Msa0455040:intron 20.0%
!! TAGAATACTATGTAGTTTAT+TGG - chr3_3:47241564-47241583 Msa0455040:intron 20.0%
!! TTGATGTAACTAGTAATATA+AGG - chr3_3:47241626-47241645 Msa0455040:intron 20.0%
!!! TTATCTTTTTATATAGGACT+AGG + chr3_3:47242416-47242435 None:intergenic 20.0%
!! AATATTGTGTTAAAGTATAG+TGG + chr3_3:47242539-47242558 None:intergenic 20.0%
!!! GGTTTATCAAAATATCTTTT+TGG + chr3_3:47242709-47242728 None:intergenic 20.0%
!!! AAGATATTTTGATAAACCAA+TGG - chr3_3:47242711-47242730 Msa0455040:intron 20.0%
!! ATTAACAATAGCAACATATT+TGG - chr3_3:47243097-47243116 Msa0455040:intron 20.0%
!! TTAACAATAGCAACATATTT+GGG - chr3_3:47243098-47243117 Msa0455040:intron 20.0%
!!! AAATTAGGGTTTTTTTCTAT+TGG - chr3_3:47243546-47243565 Msa0455040:intron 20.0%
!!! AATTAGGGTTTTTTTCTATT+GGG - chr3_3:47243547-47243566 Msa0455040:intron 20.0%
!! GTACATGCTAATATATTAAT+CGG + chr3_3:47243852-47243871 None:intergenic 20.0%
!!! TTTTTGCTTATATTATGTGA+CGG + chr3_3:47244464-47244483 None:intergenic 20.0%
!!! GTCTTTTTTGCTTATATTTT+GGG + chr3_3:47244504-47244523 None:intergenic 20.0%
!!! TGTCTTTTTTGCTTATATTT+TGG + chr3_3:47244505-47244524 None:intergenic 20.0%
!!! GAATAAACAAAAGTTTTTCT+TGG + chr3_3:47244572-47244591 None:intergenic 20.0%
!!! GATGTAAAAACAATTTTCAT+TGG + chr3_3:47244659-47244678 None:intergenic 20.0%
!!! ATAGTTTTTTGTGTTTTCTT+TGG + chr3_3:47244699-47244718 None:intergenic 20.0%
!!! TATTCTAGATTATTCTAAGA+CGG - chr3_3:47244915-47244934 Msa0455040:intron 20.0%
!!! TTTTTTGTTCTTAGAAATTG+AGG + chr3_3:47245158-47245177 None:intergenic 20.0%
!! ATGCATTAAAGAAAAAGTTA+TGG + chr3_3:47245366-47245385 None:intergenic 20.0%
!! AATTCTTATATCTCTAATCT+AGG + chr3_3:47245400-47245419 None:intergenic 20.0%
!! AGTTGAGATTAGATAAAATA+TGG - chr3_3:47245461-47245480 Msa0455040:CDS 20.0%
!! AATAATTGAGGAAAAAGATT+TGG - chr3_3:47245534-47245553 Msa0455040:CDS 20.0%
!! AAAAACAAAAAGAAGAAAGT+AGG - chr3_3:47245785-47245804 Msa0455040:CDS 20.0%
!! ATATCTTTCCTATAAAAACT+AGG - chr3_3:47245820-47245839 Msa0455040:CDS 20.0%
!! ATTTATATTTATGTGGGATT+TGG - chr3_3:47246082-47246101 Msa0455040:intron 20.0%
!! TTTATATTTATGTGGGATTT+GGG - chr3_3:47246083-47246102 Msa0455040:intron 20.0%
!!! AAACAAAGTTTTGGTTTTTT+TGG - chr3_3:47246605-47246624 Msa0455040:CDS 20.0%
! TGATATGTTAATGTTGGAAA+AGG - chr3_3:47239994-47240013 Msa0455040:CDS 25.0%
! GATAATTCTTCATCAAATAC+GGG + chr3_3:47240415-47240434 None:intergenic 25.0%
! ACAAGAGAATAATCAATTCA+AGG - chr3_3:47240844-47240863 Msa0455040:intron 25.0%
! CAAGAGAATAATCAATTCAA+GGG - chr3_3:47240845-47240864 Msa0455040:intron 25.0%
! ACATTAAAGAATGCATACAT+AGG + chr3_3:47241193-47241212 None:intergenic 25.0%
!!! GTGATCAAGATAATTTGTTT+AGG - chr3_3:47241255-47241274 Msa0455040:intron 25.0%
! CACAAAACTATTGTCTTAAA+TGG + chr3_3:47241281-47241300 None:intergenic 25.0%
! TATGTCACAATTACAATTAG+TGG - chr3_3:47241327-47241346 Msa0455040:intron 25.0%
! AGTGAATTTGATGGAAAAAA+TGG - chr3_3:47241401-47241420 Msa0455040:intron 25.0%
!! TGGAAAAAATGGTGAATTTT+TGG - chr3_3:47241412-47241431 Msa0455040:intron 25.0%
!! GGAAAAAATGGTGAATTTTT+GGG - chr3_3:47241413-47241432 Msa0455040:intron 25.0%
! TTCTATAACCAAACTGAAAA+AGG + chr3_3:47241549-47241568 None:intergenic 25.0%
! CAATTAATTACTTCCAGAAT+AGG + chr3_3:47241787-47241806 None:intergenic 25.0%
!! TTCTGGAAGTAATTAATTGT+TGG - chr3_3:47241788-47241807 Msa0455040:intron 25.0%
! AAGAATCAATTTAAGAGCTT+GGG - chr3_3:47242010-47242029 Msa0455040:intron 25.0%
! GAAATATGCAAACTAATCTT+AGG - chr3_3:47242465-47242484 Msa0455040:intron 25.0%
!!! TTTTGGGTTTTGATTAAGTT+GGG + chr3_3:47242692-47242711 None:intergenic 25.0%
!!! TTTTTGGGTTTTGATTAAGT+TGG + chr3_3:47242693-47242712 None:intergenic 25.0%
! AACTTCAAATCAAACCAAAA+TGG - chr3_3:47242813-47242832 Msa0455040:intron 25.0%
!!! AAAACTGTTTTTGTTTGGTT+TGG + chr3_3:47242898-47242917 None:intergenic 25.0%
! TAACAATAGCAACATATTTG+GGG - chr3_3:47243099-47243118 Msa0455040:intron 25.0%
!! TTCAACGAATTATGTTACTT+TGG + chr3_3:47243259-47243278 None:intergenic 25.0%
! CTAAAAAAATCGGGAAAAAT+CGG - chr3_3:47243403-47243422 Msa0455040:CDS 25.0%
! AAATAGATCTAGAAAGAAAC+TGG - chr3_3:47243476-47243495 Msa0455040:intron 25.0%
! TAGAAAAAAACCCTAATTTC+TGG + chr3_3:47243545-47243564 None:intergenic 25.0%
! GTAACAGTTAATATTGAACT+GGG + chr3_3:47244144-47244163 None:intergenic 25.0%
! AGTAACAGTTAATATTGAAC+TGG + chr3_3:47244145-47244164 None:intergenic 25.0%
! TATGTTAGCAGAATAAAGAT+TGG + chr3_3:47244405-47244424 None:intergenic 25.0%
!!! AAACAATTTTCATTGGCTAT+TGG + chr3_3:47244652-47244671 None:intergenic 25.0%
!!! ATGAGTTTTTTTTCTCTTTG+TGG - chr3_3:47245334-47245353 Msa0455040:CDS 25.0%
!! TCCTAATCTCAAGTATTTTA+CGG - chr3_3:47245419-47245438 Msa0455040:CDS 25.0%
!! GTGCATTTTCTATGAAATTT+AGG - chr3_3:47245620-47245639 Msa0455040:CDS 25.0%
!! TTTTTATGGGAAGCTAAATA+AGG + chr3_3:47245769-47245788 None:intergenic 25.0%
! TATAAAAACTAGGTAGGTTA+CGG - chr3_3:47245830-47245849 Msa0455040:CDS 25.0%
!! TAACTTAATTGCCATTTACT+AGG - chr3_3:47245897-47245916 Msa0455040:intron 25.0%
! ATATTATGAGAACACAGTTT+AGG - chr3_3:47245929-47245948 Msa0455040:intron 25.0%
! TATTATGAGAACACAGTTTA+GGG - chr3_3:47245930-47245949 Msa0455040:intron 25.0%
! AAAATATTTCAAGCAAAGCT+TGG + chr3_3:47245967-47245986 None:intergenic 25.0%
! TTATATTTATGTGGGATTTG+GGG - chr3_3:47246084-47246103 Msa0455040:intron 25.0%
! TTCATCATAAATCAGGAAAT+CGG + chr3_3:47246163-47246182 None:intergenic 25.0%
! ACTAATCTTCATCATAAATC+AGG + chr3_3:47246170-47246189 None:intergenic 25.0%
! TATCTGTTAAAAATTCTGCT+CGG + chr3_3:47246309-47246328 None:intergenic 25.0%
! AACAAGAAGATAAAAACCAA+TGG - chr3_3:47246459-47246478 Msa0455040:CDS 25.0%
! ATAGACTGGTAATATTAGAT+AGG - chr3_3:47246495-47246514 Msa0455040:CDS 25.0%
! ATTAGATAGGAAAACATACT+TGG - chr3_3:47246508-47246527 Msa0455040:CDS 25.0%
!!! CACATAAACTTTTTGTTGTA+TGG - chr3_3:47246531-47246550 Msa0455040:CDS 25.0%
!!! TTGGTTTTTTTGGTTATGTT+AGG - chr3_3:47246615-47246634 Msa0455040:CDS 25.0%
!!! TGGTTTTTTTGGTTATGTTA+GGG - chr3_3:47246616-47246635 Msa0455040:exon 25.0%
TAAAGGAAGAAAGGAGTAAT+GGG - chr3_3:47240044-47240063 Msa0455040:CDS 30.0%
ATTGAGTATGTATGTTTGGT+TGG - chr3_3:47240345-47240364 Msa0455040:intron 30.0%
AGAATAATCAATTCAAGGGT+TGG - chr3_3:47240849-47240868 Msa0455040:intron 30.0%
GAATAATCAATTCAAGGGTT+GGG - chr3_3:47240850-47240869 Msa0455040:intron 30.0%
AATAATCAATTCAAGGGTTG+GGG - chr3_3:47240851-47240870 Msa0455040:intron 30.0%
! ACCAACAAATCTGTTCTTTT+TGG + chr3_3:47241107-47241126 None:intergenic 30.0%
!!! GCAATTTTTGTTGTTTCTTC+AGG + chr3_3:47241218-47241237 None:intergenic 30.0%
ATACTATGTAGTTTATTGGC+AGG - chr3_3:47241568-47241587 Msa0455040:intron 30.0%
! AGTAGAAATCTGAGTTTTTG+TGG - chr3_3:47241684-47241703 Msa0455040:intron 30.0%
ATTTAATTGCAGATACTGAG+CGG - chr3_3:47241828-47241847 Msa0455040:intron 30.0%
TTACCTGACATTATATCAGT+GGG + chr3_3:47241905-47241924 None:intergenic 30.0%
ATTACCTGACATTATATCAG+TGG + chr3_3:47241906-47241925 None:intergenic 30.0%
AGGAAATTGAAGAGAAGATT+AGG - chr3_3:47241975-47241994 Msa0455040:intron 30.0%
GAAGAATCAATTTAAGAGCT+TGG - chr3_3:47242009-47242028 Msa0455040:intron 30.0%
!! ACTACATGATTTTGATGTTG+AGG - chr3_3:47242033-47242052 Msa0455040:intron 30.0%
AAGTTTAGGGAGAATAGTAA+TGG - chr3_3:47242097-47242116 Msa0455040:intron 30.0%
AGTTTAGGGAGAATAGTAAT+GGG - chr3_3:47242098-47242117 Msa0455040:intron 30.0%
AATGTCTTGAAAGCTGAATT+GGG - chr3_3:47242139-47242158 Msa0455040:intron 30.0%
ACTAAACACTAACCTCTATT+TGG - chr3_3:47242376-47242395 Msa0455040:intron 30.0%
!! GGTGTTATACTTTTCAACTA+AGG + chr3_3:47242671-47242690 None:intergenic 30.0%
AATCAAACCAAAATGGCTTT+CGG - chr3_3:47242820-47242839 Msa0455040:intron 30.0%
!!! GACAGAAAACTGTTTTTGTT+TGG + chr3_3:47242903-47242922 None:intergenic 30.0%
AAGAGGTAAAACCATCTAAT+TGG + chr3_3:47242948-47242967 None:intergenic 30.0%
AAACCTAACCAAAATGGTAT+TGG - chr3_3:47242969-47242988 Msa0455040:intron 30.0%
! CATATTTGGGGTGTAAAAAT+AGG - chr3_3:47243111-47243130 Msa0455040:intron 30.0%
ACAAACAAATGCTGTAAACT+AGG - chr3_3:47243209-47243228 Msa0455040:intron 30.0%
ACATAATTCGTTGAACTCAT+AGG - chr3_3:47243264-47243283 Msa0455040:intron 30.0%
!! TTTATTTTTCCCGATTGTTC+CGG + chr3_3:47243382-47243401 None:intergenic 30.0%
! TTCTGAAGATGATGATGTAA+AGG - chr3_3:47243428-47243447 Msa0455040:CDS 30.0%
CTAGATCTATTTCATCTTGT+TGG + chr3_3:47243468-47243487 None:intergenic 30.0%
AAGAAGATGACCAGAAATTA+GGG - chr3_3:47243532-47243551 Msa0455040:intron 30.0%
GGTGATATTGATAAAGATGA+AGG - chr3_3:47244171-47244190 Msa0455040:CDS 30.0%
!! GACTATTTTATGTGCTATTG+AGG - chr3_3:47244224-47244243 Msa0455040:CDS 30.0%
TTCACAAGCAAATTTCCATA+GGG + chr3_3:47244365-47244384 None:intergenic 30.0%
ATTCACAAGCAAATTTCCAT+AGG + chr3_3:47244366-47244385 None:intergenic 30.0%
!! TTTTCATTGGCTATTGGTTA+TGG + chr3_3:47244646-47244665 None:intergenic 30.0%
TGTTCTTAGAAATTGAGGTT+GGG + chr3_3:47245153-47245172 None:intergenic 30.0%
TTGTTCTTAGAAATTGAGGT+TGG + chr3_3:47245154-47245173 None:intergenic 30.0%
ATGATATGCTTGGGTAAATA+TGG - chr3_3:47245489-47245508 Msa0455040:CDS 30.0%
CTTCAAATGACAATAGTTAC+AGG + chr3_3:47245669-47245688 None:intergenic 30.0%
! ATAGTAGTTGTGTAATGGAA+CGG + chr3_3:47245711-47245730 None:intergenic 30.0%
TTAGGATAGTAGTTGTGTAA+TGG + chr3_3:47245716-47245735 None:intergenic 30.0%
ACTATCCTAATCATTCTGTT+TGG - chr3_3:47245726-47245745 Msa0455040:CDS 30.0%
AATCACCAAACAGAATGATT+AGG + chr3_3:47245734-47245753 None:intergenic 30.0%
AACAAAAAGAAGAAAGTAGG+TGG - chr3_3:47245788-47245807 Msa0455040:CDS 30.0%
CTTTCCTATAAAAACTAGGT+AGG - chr3_3:47245824-47245843 Msa0455040:CDS 30.0%
!! GTAACCTACCTAGTTTTTAT+AGG + chr3_3:47245831-47245850 None:intergenic 30.0%
! TTTTCAGCACACTCTTTTAT+TGG - chr3_3:47246034-47246053 Msa0455040:intron 30.0%
AAGAAACTTTGCAACAAAAC+CGG - chr3_3:47246278-47246297 Msa0455040:CDS 30.0%
! AGATATTCTGTTTCTTCTCT+TGG - chr3_3:47246324-47246343 Msa0455040:CDS 30.0%
GAAATCAAATTCTTCAGAAG+AGG + chr3_3:47246424-47246443 None:intergenic 30.0%
ATTACCAGTCTATTTACCTT+TGG + chr3_3:47246488-47246507 None:intergenic 30.0%
TAGGTATATAGAGCAGAATA+GGG - chr3_3:47246573-47246592 Msa0455040:CDS 30.0%
ATTATCAATGCCCTGTTAAA+TGG - chr3_3:47246651-47246670 Msa0455040:five_prime_UTR 30.0%
CTGACCTTATAAACGTATCT+CGG + chr3_3:47239874-47239893 None:intergenic 35.0%
CAATTAGGGTTTCTTCAACA+AGG + chr3_3:47239904-47239923 None:intergenic 35.0%
TTGAAGAAACCCTAATTGCT+AGG - chr3_3:47239906-47239925 Msa0455040:exon 35.0%
TGAAGAAACCCTAATTGCTA+GGG - chr3_3:47239907-47239926 Msa0455040:exon 35.0%
! CTTTTCTTCCCTAGCAATTA+GGG + chr3_3:47239918-47239937 None:intergenic 35.0%
! ACTTTTCTTCCCTAGCAATT+AGG + chr3_3:47239919-47239938 None:intergenic 35.0%
GCTAGGGAAGAAAAGTTAAA+AGG - chr3_3:47239923-47239942 Msa0455040:CDS 35.0%
! GGAAAAGGTTAGTGTTGAAA+TGG - chr3_3:47240009-47240028 Msa0455040:CDS 35.0%
TGAAGAGAGTAAAGGAAGAA+AGG - chr3_3:47240035-47240054 Msa0455040:CDS 35.0%
GTAAAGGAAGAAAGGAGTAA+TGG - chr3_3:47240043-47240062 Msa0455040:CDS 35.0%
AAAGGAAGAAAGGAGTAATG+GGG - chr3_3:47240045-47240064 Msa0455040:CDS 35.0%
! AAAGGAGTAATGGGGAATTA+GGG - chr3_3:47240053-47240072 Msa0455040:CDS 35.0%
!! AAGAAGAGAAAGGTTGGTAA+TGG - chr3_3:47240103-47240122 Msa0455040:CDS 35.0%
!! AGAAGAGAAAGGTTGGTAAT+GGG - chr3_3:47240104-47240123 Msa0455040:CDS 35.0%
!! TTTTGAAGGTGGAAGAGTTT+TGG - chr3_3:47240156-47240175 Msa0455040:intron 35.0%
! TTTTGGTGAAGGAAAAGAGA+GGG - chr3_3:47240173-47240192 Msa0455040:intron 35.0%
AAACCAATTGGAATTACTCC+AGG - chr3_3:47240503-47240522 Msa0455040:intron 35.0%
AACCAATTGGAATTACTCCA+GGG - chr3_3:47240504-47240523 Msa0455040:intron 35.0%
! AGAATAGTCGATTCAAGAGT+TGG - chr3_3:47240615-47240634 Msa0455040:intron 35.0%
! GAATAGTCGATTCAAGAGTT+GGG - chr3_3:47240616-47240635 Msa0455040:intron 35.0%
! AATAGTCGATTCAAGAGTTG+GGG - chr3_3:47240617-47240636 Msa0455040:intron 35.0%
!!! CATGCTCAATTTTGAGATTG+AGG - chr3_3:47240640-47240659 Msa0455040:intron 35.0%
!!! TTTTGAGATTGAGGTGAACA+CGG - chr3_3:47240649-47240668 Msa0455040:intron 35.0%
GAAAGGAGATTATGAAGCTT+GGG - chr3_3:47240690-47240709 Msa0455040:intron 35.0%
AAAGGAGATTATGAAGCTTG+GGG - chr3_3:47240691-47240710 Msa0455040:intron 35.0%
!! ATTGAGGTGTTGAAGAATAG+AGG - chr3_3:47240731-47240750 Msa0455040:intron 35.0%
!! TTGAGGTGTTGAAGAATAGA+GGG - chr3_3:47240732-47240751 Msa0455040:intron 35.0%
! AGATGAAAACGTTGAGGTTT+TGG - chr3_3:47240757-47240776 Msa0455040:intron 35.0%
GCCAAAAAGAACAGATTTGT+TGG - chr3_3:47241103-47241122 Msa0455040:intron 35.0%
AAAGATTCTCTAGGTTCTTC+TGG - chr3_3:47241139-47241158 Msa0455040:intron 35.0%
TGTGCTCTGTAATGACATTA+AGG - chr3_3:47241297-47241316 Msa0455040:intron 35.0%
AGTCAAGAATAGTTGTAGAG+TGG - chr3_3:47241350-47241369 Msa0455040:intron 35.0%
AAGAATAGTTGTAGAGTGGA+TGG - chr3_3:47241354-47241373 Msa0455040:intron 35.0%
! ATGTGCTGATATTTGCCTTA+AGG - chr3_3:47241468-47241487 Msa0455040:intron 35.0%
! AAAGAGTCCTGTCTTTTACT+TGG - chr3_3:47241493-47241512 Msa0455040:intron 35.0%
ATTTCAAAAGACATGAGCCA+AGG + chr3_3:47241602-47241621 None:intergenic 35.0%
! ATATAAGGCTCAGCATGTTT+TGG - chr3_3:47241641-47241660 Msa0455040:intron 35.0%
! GAAATCTGAGTTTTTGTGGA+TGG - chr3_3:47241688-47241707 Msa0455040:intron 35.0%
CCACGTTCATGAAAATTAAG+TGG + chr3_3:47241714-47241733 None:intergenic 35.0%
! CCACTTAATTTTCATGAACG+TGG - chr3_3:47241711-47241730 Msa0455040:intron 35.0%
AAACCCACTGATATAATGTC+AGG - chr3_3:47241899-47241918 Msa0455040:intron 35.0%
!! TGAGGAGTTGGTAAAGTTTA+GGG - chr3_3:47242084-47242103 Msa0455040:intron 35.0%
GAATGTCTTGAAAGCTGAAT+TGG - chr3_3:47242138-47242157 Msa0455040:intron 35.0%
ATGTCTTGAAAGCTGAATTG+GGG - chr3_3:47242140-47242159 Msa0455040:intron 35.0%
ACTCAAAGGTGAAAATGTCA+AGG - chr3_3:47242234-47242253 Msa0455040:CDS 35.0%
AGGTGAAAATGTCAAGGATT+CGG - chr3_3:47242240-47242259 Msa0455040:CDS 35.0%
TCTAATATCTCGCCAAATAG+AGG + chr3_3:47242391-47242410 None:intergenic 35.0%
GCTTAAAGCTAACAAAGCTT+TGG + chr3_3:47242631-47242650 None:intergenic 35.0%
TTCATGCTTAAGCTACTTCT+GGG + chr3_3:47242779-47242798 None:intergenic 35.0%
AAGTAGCTTAAGCATGAACT+GGG - chr3_3:47242781-47242800 Msa0455040:intron 35.0%
ATCAAACCAAAATGGCTTTC+GGG - chr3_3:47242821-47242840 Msa0455040:intron 35.0%
!!! CATTTTGGTTAGGTTTGAAG+AGG + chr3_3:47242965-47242984 None:intergenic 35.0%
CTCTTCAAACCTAACCAAAA+TGG - chr3_3:47242963-47242982 Msa0455040:intron 35.0%
! TAACCAAAATGGTATTGGAC+CGG - chr3_3:47242974-47242993 Msa0455040:intron 35.0%
AAAATTGACAGTGGTGTTTG+TGG - chr3_3:47243029-47243048 Msa0455040:intron 35.0%
AGCAAGATGTTGAACCAAAT+TGG - chr3_3:47243053-47243072 Msa0455040:intron 35.0%
!! AGAAACTGGTTTGAAAACTG+TGG - chr3_3:47243490-47243509 Msa0455040:intron 35.0%
GAAGAAGATGACCAGAAATT+AGG - chr3_3:47243531-47243550 Msa0455040:intron 35.0%
CCCATATAAAAATGGTTCAG+CGG + chr3_3:47243591-47243610 None:intergenic 35.0%
!! CCGCTGAACCATTTTTATAT+GGG - chr3_3:47243588-47243607 Msa0455040:intron 35.0%
! ACATAGTTGGTACGCTATTT+CGG + chr3_3:47243881-47243900 None:intergenic 35.0%
ACATAATTCGCAGTTCGATT+CGG + chr3_3:47243968-47243987 None:intergenic 35.0%
AACTGCGAATTATGTGACTA+TGG - chr3_3:47243973-47243992 Msa0455040:intron 35.0%
ACTGCGAATTATGTGACTAT+GGG - chr3_3:47243974-47243993 Msa0455040:intron 35.0%
GATCTCTAACACTTGAAGAT+TGG - chr3_3:47244046-47244065 Msa0455040:intron 35.0%
! TCATGTGTTATTGCGTATAG+TGG + chr3_3:47244330-47244349 None:intergenic 35.0%
TGAATGTAGTATCTTCCCTA+TGG - chr3_3:47244347-47244366 Msa0455040:CDS 35.0%
! AGGGAGTATACTACTATGTA+GGG + chr3_3:47244441-47244460 None:intergenic 35.0%
! TGCTTATATTATGTGACGGA+GGG + chr3_3:47244460-47244479 None:intergenic 35.0%
TTGCTTATATTATGTGACGG+AGG + chr3_3:47244461-47244480 None:intergenic 35.0%
! TTGCTTATAATTTGGGACGA+AGG - chr3_3:47244772-47244791 Msa0455040:intron 35.0%
! TGCTTATAATTTGGGACGAA+GGG - chr3_3:47244773-47244792 Msa0455040:intron 35.0%
! AGCCATCTTTTATCCAATGT+GGG + chr3_3:47245064-47245083 None:intergenic 35.0%
! AAGCCATCTTTTATCCAATG+TGG + chr3_3:47245065-47245084 None:intergenic 35.0%
TGGCTTGAACATGTGTTTAA+CGG - chr3_3:47245079-47245098 Msa0455040:intron 35.0%
TTGAACATGTGTTTAACGGT+GGG - chr3_3:47245083-47245102 Msa0455040:intron 35.0%
TATGCTTCCTTGAAATCTCA+AGG - chr3_3:47245286-47245305 Msa0455040:CDS 35.0%
GCCGTAAAATACTTGAGATT+AGG + chr3_3:47245423-47245442 None:intergenic 35.0%
TATGGAACAGATGATATGCT+TGG - chr3_3:47245479-47245498 Msa0455040:CDS 35.0%
ATGGAACAGATGATATGCTT+GGG - chr3_3:47245480-47245499 Msa0455040:CDS 35.0%
ACGGGAATAAAAAGCTAACA+TGG + chr3_3:47245692-47245711 None:intergenic 35.0%
! TAGTAGTTGTGTAATGGAAC+GGG + chr3_3:47245710-47245729 None:intergenic 35.0%
! TAATTGCCATTTACTAGGAG+AGG - chr3_3:47245902-47245921 Msa0455040:intron 35.0%
!! TCATGTGTCATTTCAGATAC+TGG - chr3_3:47246228-47246247 Msa0455040:CDS 35.0%
!! CATGTGTCATTTCAGATACT+GGG - chr3_3:47246229-47246248 Msa0455040:CDS 35.0%
!! ATGTGTCATTTCAGATACTG+GGG - chr3_3:47246230-47246249 Msa0455040:CDS 35.0%
ACTGGGGAAAAAAGTTCATT+TGG - chr3_3:47246246-47246265 Msa0455040:CDS 35.0%
TGTTGCAAAGTTTCTTCGAA+CGG + chr3_3:47246274-47246293 None:intergenic 35.0%
AAATTCTTCAGAAGAGGAAC+TGG + chr3_3:47246418-47246437 None:intergenic 35.0%
CTAGGTATATAGAGCAGAAT+AGG - chr3_3:47246572-47246591 Msa0455040:CDS 35.0%
! AGGAAGGGTAAACAAAGTTT+TGG - chr3_3:47246596-47246615 Msa0455040:CDS 35.0%
CCGAAAAACGGTTCGAAATT+GGG + chr3_3:47239785-47239804 None:intergenic 40.0%
!! CCCAATTTCGAACCGTTTTT+CGG - chr3_3:47239782-47239801 Msa0455040:three_prime_UTR 40.0%
TCCGAAAAACGGTTCGAAAT+TGG + chr3_3:47239786-47239805 None:intergenic 40.0%
TATAAACGTATCTCGGAGCT+CGG + chr3_3:47239867-47239886 None:intergenic 40.0%
AGCTCCGAGATACGTTTATA+AGG - chr3_3:47239867-47239886 Msa0455040:three_prime_UTR 40.0%
AATGGAGCTGAAGAGAGTAA+AGG - chr3_3:47240027-47240046 Msa0455040:CDS 40.0%
! GAAAGGAGTAATGGGGAATT+AGG - chr3_3:47240052-47240071 Msa0455040:CDS 40.0%
! AGTAATGGGGAATTAGGGTT+TGG - chr3_3:47240058-47240077 Msa0455040:CDS 40.0%
!! GAAGAGAAAGGTTGGTAATG+GGG - chr3_3:47240105-47240124 Msa0455040:CDS 40.0%
!! GTTTTGGTGAAGGAAAAGAG+AGG - chr3_3:47240172-47240191 Msa0455040:intron 40.0%
TTTGGTGAAGGAAAAGAGAG+GGG - chr3_3:47240174-47240193 Msa0455040:intron 40.0%
GGTGAACAAAGCAAGAAAGA+TGG - chr3_3:47240199-47240218 Msa0455040:intron 40.0%
ACCAATTGGAATTACTCCAG+GGG - chr3_3:47240505-47240524 Msa0455040:intron 40.0%
AAGCAACTGAAGAGAAGTTG+AGG - chr3_3:47240582-47240601 Msa0455040:intron 40.0%
AGCAACTGAAGAGAAGTTGA+GGG - chr3_3:47240583-47240602 Msa0455040:intron 40.0%
GGAAAGGAGATTATGAAGCT+TGG - chr3_3:47240689-47240708 Msa0455040:intron 40.0%
!! TGAGGTGTTGAAGAATAGAG+GGG - chr3_3:47240733-47240752 Msa0455040:intron 40.0%
!!! AAGGCTCAATTTTGAGGTTG+AGG - chr3_3:47240874-47240893 Msa0455040:intron 40.0%
AAGGTTGTGGAGAATGGTAA+TGG - chr3_3:47240938-47240957 Msa0455040:intron 40.0%
AGGTTGTGGAGAATGGTAAT+GGG - chr3_3:47240939-47240958 Msa0455040:intron 40.0%
!! GGTAATGGGCTTGGATTAAA+TGG - chr3_3:47240953-47240972 Msa0455040:intron 40.0%
! AATGGGCTTGGATTAAATGG+TGG - chr3_3:47240956-47240975 Msa0455040:intron 40.0%
! GCTTGGATTAAATGGTGGAA+AGG - chr3_3:47240961-47240980 Msa0455040:intron 40.0%
!!! AAGGTTTTGAAAGCTGCAGT+TGG - chr3_3:47240980-47240999 Msa0455040:intron 40.0%
!!! AGGTTTTGAAAGCTGCAGTT+GGG - chr3_3:47240981-47241000 Msa0455040:intron 40.0%
CACGCAAAAGGCAAATTTGA+GGG - chr3_3:47241004-47241023 Msa0455040:intron 40.0%
ACGCAAAAGGCAAATTTGAG+GGG - chr3_3:47241005-47241024 Msa0455040:intron 40.0%
TTTGAGGGGTTGAAGAATAG+AGG - chr3_3:47241019-47241038 Msa0455040:intron 40.0%
TTGAGGGGTTGAAGAATAGA+GGG - chr3_3:47241020-47241039 Msa0455040:intron 40.0%
!! AAGAATAGAGGGGTTGGTAA+TGG - chr3_3:47241031-47241050 Msa0455040:intron 40.0%
!! AGAATAGAGGGGTTGGTAAT+GGG - chr3_3:47241032-47241051 Msa0455040:intron 40.0%
!! AACAGATTTGTTGGTGAACC+AGG - chr3_3:47241112-47241131 Msa0455040:intron 40.0%
TTCTCTAGGTTCTTCTGGTA+TGG - chr3_3:47241144-47241163 Msa0455040:intron 40.0%
!!! AGTGGATGGTGTTTTAACCA+TGG - chr3_3:47241368-47241387 Msa0455040:intron 40.0%
AGATGGTGCAGTGAATTTGA+TGG - chr3_3:47241392-47241411 Msa0455040:intron 40.0%
TTTGTTGCACAAAACTCAGC+AGG - chr3_3:47241444-47241463 Msa0455040:intron 40.0%
CAATGTGCCAAGTAAAAGAC+AGG + chr3_3:47241503-47241522 None:intergenic 40.0%
!!! TACCTGTGCCTTTTTCAGTT+TGG - chr3_3:47241538-47241557 Msa0455040:intron 40.0%
! AACCAAACTGAAAAAGGCAC+AGG + chr3_3:47241543-47241562 None:intergenic 40.0%
CTGCTCTTCATTTCCTATTC+TGG - chr3_3:47241771-47241790 Msa0455040:intron 40.0%
AGCAAACCTTGCAACAAGAT+TGG - chr3_3:47241874-47241893 Msa0455040:intron 40.0%
GTTTAGCCAATCTTGTTGCA+AGG + chr3_3:47241883-47241902 None:intergenic 40.0%
AGAAGATTAGGTTACTGCAC+AGG - chr3_3:47241987-47242006 Msa0455040:intron 40.0%
CACAGAAAGTCAATGGAGAA+AGG - chr3_3:47242056-47242075 Msa0455040:intron 40.0%
AAAGTCAATGGAGAAAGGTG+TGG - chr3_3:47242061-47242080 Msa0455040:intron 40.0%
!! GTGAGGAGTTGGTAAAGTTT+AGG - chr3_3:47242083-47242102 Msa0455040:intron 40.0%
GAATGAAAGTCACAAGCTTG+AGG - chr3_3:47242162-47242181 Msa0455040:intron 40.0%
TTGAGGTGGTGAAGAATAGT+GGG - chr3_3:47242179-47242198 Msa0455040:intron 40.0%
! AAGAATAGTGGGGATGTTGA+TGG - chr3_3:47242190-47242209 Msa0455040:intron 40.0%
! AGAATAGTGGGGATGTTGAT+GGG - chr3_3:47242191-47242210 Msa0455040:intron 40.0%
TTCGGCTGAAAGGAAAAGAT+TGG - chr3_3:47242258-47242277 Msa0455040:CDS 40.0%
GGTGAACCAAAGAAGAAAGA+TGG - chr3_3:47242283-47242302 Msa0455040:intron 40.0%
CCTTGACCATCTTTCTTCTT+TGG + chr3_3:47242292-47242311 None:intergenic 40.0%
CCAAAGAAGAAAGATGGTCA+AGG - chr3_3:47242289-47242308 Msa0455040:intron 40.0%
AAAGATGGTCAAGGTTCTTC+AGG - chr3_3:47242298-47242317 Msa0455040:intron 40.0%
!! AACAAAGCTTTGGCTTGAGA+GGG + chr3_3:47242621-47242640 None:intergenic 40.0%
!! TAACAAAGCTTTGGCTTGAG+AGG + chr3_3:47242622-47242641 None:intergenic 40.0%
ATTGTTCTTGTGGTCACCAT+TGG + chr3_3:47242730-47242749 None:intergenic 40.0%
GTTCATGCTTAAGCTACTTC+TGG + chr3_3:47242780-47242799 None:intergenic 40.0%
GAAGTAGCTTAAGCATGAAC+TGG - chr3_3:47242780-47242799 Msa0455040:intron 40.0%
TTTGAAGATATGCCACCTTC+TGG + chr3_3:47242875-47242894 None:intergenic 40.0%
!!! GGTCCAATACCATTTTGGTT+AGG + chr3_3:47242975-47242994 None:intergenic 40.0%
!!! TGTCAATTTTAGTTGCTGCC+TGG + chr3_3:47243019-47243038 None:intergenic 40.0%
GCAGCAACTAAAATTGACAG+TGG - chr3_3:47243020-47243039 Msa0455040:intron 40.0%
GATGTTGAACCAAATTGGAG+CGG - chr3_3:47243058-47243077 Msa0455040:intron 40.0%
!! TATGTTACTTTGGTCTGTCC+AGG + chr3_3:47243249-47243268 None:intergenic 40.0%
!!! GCGAATTTTGAAGCGAATTC+TGG + chr3_3:47243346-47243365 None:intergenic 40.0%
TGATGTAAAGGATGCAGTTG+CGG - chr3_3:47243440-47243459 Msa0455040:CDS 40.0%
!! GCCGCTGAACCATTTTTATA+TGG - chr3_3:47243587-47243606 Msa0455040:intron 40.0%
TTCAAAGAATCGGGTACGTA+GGG + chr3_3:47243910-47243929 None:intergenic 40.0%
GATAAGACCCACATCTATCA+TGG - chr3_3:47244088-47244107 Msa0455040:intron 40.0%
AATATTGAACTGGGCCCATA+TGG + chr3_3:47244135-47244154 None:intergenic 40.0%
! AGAAACCCCTTTCAGCTTTT+TGG - chr3_3:47244280-47244299 Msa0455040:CDS 40.0%
AGCAGTCCAAAAAGCTGAAA+GGG + chr3_3:47244289-47244308 None:intergenic 40.0%
! GAGGGAGTATACTACTATGT+AGG + chr3_3:47244442-47244461 None:intergenic 40.0%
AGTCTCCTTCGAGATCTATT+GGG - chr3_3:47244944-47244963 Msa0455040:intron 40.0%
GATAGCAGAAACCTAATAGC+AGG + chr3_3:47244973-47244992 None:intergenic 40.0%
TTGGTGTGTGGATAAATGGT+GGG + chr3_3:47245002-47245021 None:intergenic 40.0%
ATTGGTGTGTGGATAAATGG+TGG + chr3_3:47245003-47245022 None:intergenic 40.0%
ACACCAATCCCAATAGTGTT+GGG - chr3_3:47245015-47245034 Msa0455040:intron 40.0%
TGTGTTTAAGAGTCCCACAT+TGG - chr3_3:47245048-47245067 Msa0455040:intron 40.0%
GTCCCACATTGGATAAAAGA+TGG - chr3_3:47245059-47245078 Msa0455040:intron 40.0%
CTTGAACATGTGTTTAACGG+TGG - chr3_3:47245082-47245101 Msa0455040:intron 40.0%
TGAACATGTGTTTAACGGTG+GGG - chr3_3:47245084-47245103 Msa0455040:intron 40.0%
! CAAAATCGGCTTATGAGGTA+AGG + chr3_3:47245115-47245134 None:intergenic 40.0%
!! TACCTCATAAGCCGATTTTG+TGG - chr3_3:47245115-47245134 Msa0455040:intron 40.0%
!! ACCTCATAAGCCGATTTTGT+GGG - chr3_3:47245116-47245135 Msa0455040:intron 40.0%
CTAACACAACCCCACAAAAT+CGG + chr3_3:47245129-47245148 None:intergenic 40.0%
CTTCCTTGAAATCTCAAGGA+CGG - chr3_3:47245290-47245309 Msa0455040:CDS 40.0%
TTCCTTGAAATCTCAAGGAC+GGG - chr3_3:47245291-47245310 Msa0455040:CDS 40.0%
ATGACAATAGTTACAGGTCC+TGG + chr3_3:47245663-47245682 None:intergenic 40.0%
! TCGGCAACACACTCTTTTAT+TGG + chr3_3:47246130-47246149 None:intergenic 40.0%
ATAAATCAGGAAATCGGACG+AGG + chr3_3:47246157-47246176 None:intergenic 40.0%
!! TCTTGGATTAGCTGCAACAT+TGG - chr3_3:47246341-47246360 Msa0455040:CDS 40.0%
AGCTGCAACATTGGATATCT+TGG - chr3_3:47246350-47246369 Msa0455040:CDS 40.0%
ACTGGAACTAGAATTGGAAC+TGG + chr3_3:47246400-47246419 None:intergenic 40.0%
AGAGGAACTGGAACTAGAAT+TGG + chr3_3:47246406-47246425 None:intergenic 40.0%
TAAAAACCAATGGCAGCCAA+AGG - chr3_3:47246469-47246488 Msa0455040:CDS 40.0%
TATTTACCTTTGGCTGCCAT+TGG + chr3_3:47246478-47246497 None:intergenic 40.0%
TTCTGCTCTATATACCTAGC+TGG + chr3_3:47246571-47246590 None:intergenic 40.0%
GTATATAGAGCAGAATAGGG+AGG - chr3_3:47246576-47246595 Msa0455040:CDS 40.0%
!! TTTCGAACCGTTTTTCGGAC+CGG - chr3_3:47239787-47239806 Msa0455040:three_prime_UTR 45.0%
ATGGGGAATTAGGGTTTGGA+AGG - chr3_3:47240062-47240081 Msa0455040:CDS 45.0%
! TTAGGGTTTGGAAGGTGTAG+TGG - chr3_3:47240070-47240089 Msa0455040:CDS 45.0%
TGAAGTGGGGAAGAAGAGAA+AGG - chr3_3:47240093-47240112 Msa0455040:CDS 45.0%
!! AGGTGGAAGAGTTTTGGTGA+AGG - chr3_3:47240162-47240181 Msa0455040:intron 45.0%
CAAAGCAAGAAAGATGGCGT+AGG - chr3_3:47240205-47240224 Msa0455040:intron 45.0%
TCCCCTGGAGTAATTCCAAT+TGG + chr3_3:47240509-47240528 None:intergenic 45.0%
ACACGGTCAAAATTATCCCC+TGG + chr3_3:47240524-47240543 None:intergenic 45.0%
AGGGGAAGATGAAAACGTTG+AGG - chr3_3:47240751-47240770 Msa0455040:intron 45.0%
TTCCCTAACCACTAGAGTCT+TGG + chr3_3:47240783-47240802 None:intergenic 45.0%
GGTTAGGGAAGCAATGTTGA+AGG - chr3_3:47240559-47240578 Msa0455040:intron 45.0%
ATCAATTCAAGGGTTGGGGA+AGG - chr3_3:47240855-47240874 Msa0455040:intron 45.0%
! TTGGGGAAGGCTCAATTTTG+AGG - chr3_3:47240868-47240887 Msa0455040:intron 45.0%
CTCATGAAGGTTGTGGAGAA+TGG - chr3_3:47240932-47240951 Msa0455040:intron 45.0%
GCACGCAAAAGGCAAATTTG+AGG - chr3_3:47241003-47241022 Msa0455040:intron 45.0%
TGAGGGGTTGAAGAATAGAG+GGG - chr3_3:47241021-47241040 Msa0455040:intron 45.0%
!! GAATAGAGGGGTTGGTAATG+GGG - chr3_3:47241033-47241052 Msa0455040:intron 45.0%
TGCAGAACTGGATGTTGGAA+AGG - chr3_3:47241069-47241088 Msa0455040:intron 45.0%
! TGTTGGAAAGGTCGAGGTTT+TGG - chr3_3:47241081-47241100 Msa0455040:intron 45.0%
CCTAGAGAATCTTTCTTGCC+TGG + chr3_3:47241133-47241152 None:intergenic 45.0%
CCAGGCAAGAAAGATTCTCT+AGG - chr3_3:47241130-47241149 Msa0455040:intron 45.0%
!!! GGTGTTTTAACCATGGCAGA+TGG - chr3_3:47241375-47241394 Msa0455040:intron 45.0%
GACAGGACTCTTTCACCTTA+AGG + chr3_3:47241486-47241505 None:intergenic 45.0%
ATTGGCAGGTTATCCTTCCT+TGG - chr3_3:47241582-47241601 Msa0455040:intron 45.0%
CAAAAGACATGAGCCAAGGA+AGG + chr3_3:47241598-47241617 None:intergenic 45.0%
ATCAACAGTGAAGAGCCCTT+AGG - chr3_3:47241929-47241948 Msa0455040:intron 45.0%
TCAACAGTGAAGAGCCCTTA+GGG - chr3_3:47241930-47241949 Msa0455040:intron 45.0%
GTTGAGGCACAGAAAGTCAA+TGG - chr3_3:47242049-47242068 Msa0455040:intron 45.0%
AATGGGATTGACCTAGACGA+TGG - chr3_3:47242115-47242134 Msa0455040:intron 45.0%
ATGGGATTGACCTAGACGAT+GGG - chr3_3:47242116-47242135 Msa0455040:intron 45.0%
TCAAGACATTCCCATCGTCT+AGG + chr3_3:47242129-47242148 None:intergenic 45.0%
TGAAAGTCACAAGCTTGAGG+TGG - chr3_3:47242165-47242184 Msa0455040:intron 45.0%
CTTGAGGTGGTGAAGAATAG+TGG - chr3_3:47242178-47242197 Msa0455040:intron 45.0%
TGAGGTGGTGAAGAATAGTG+GGG - chr3_3:47242180-47242199 Msa0455040:intron 45.0%
! GAATAGTGGGGATGTTGATG+GGG - chr3_3:47242192-47242211 Msa0455040:intron 45.0%
! TGTGCTGTTGGTGAACTCAA+AGG - chr3_3:47242220-47242239 Msa0455040:CDS 45.0%
ATGTCAAGGATTCGGCTGAA+AGG - chr3_3:47242248-47242267 Msa0455040:CDS 45.0%
GCTGAAAGGAAAAGATTGGC+TGG - chr3_3:47242262-47242281 Msa0455040:CDS 45.0%
TGGTCAAGGTTCTTCAGGTA+TGG - chr3_3:47242303-47242322 Msa0455040:intron 45.0%
!! ACAAAGCTTTGGCTTGAGAG+GGG + chr3_3:47242620-47242639 None:intergenic 45.0%
GCGACAGTTGTAATTCACAC+TGG + chr3_3:47242847-47242866 None:intergenic 45.0%
! AGATATGCCACCTTCTGGTT+GGG + chr3_3:47242870-47242889 None:intergenic 45.0%
AAGATATGCCACCTTCTGGT+TGG + chr3_3:47242871-47242890 None:intergenic 45.0%
AACCATCTAATTGGAGCTGC+AGG + chr3_3:47242939-47242958 None:intergenic 45.0%
ACTTCAAGAGTGGTTAGCAC+CGG + chr3_3:47242996-47243015 None:intergenic 45.0%
CTCAATGTACCGCTCCAATT+TGG + chr3_3:47243070-47243089 None:intergenic 45.0%
CAAATTGGAGCGGTACATTG+AGG - chr3_3:47243068-47243087 Msa0455040:intron 45.0%
TGGGGTGTAAAAATAGGACC+TGG - chr3_3:47243117-47243136 Msa0455040:intron 45.0%
GGGGTGTAAAAATAGGACCT+GGG - chr3_3:47243118-47243137 Msa0455040:intron 45.0%
AATAGGACCTGGGATACTAG+AGG - chr3_3:47243128-47243147 Msa0455040:intron 45.0%
GATACTAGAGGCAAACGAAC+AGG - chr3_3:47243140-47243159 Msa0455040:intron 45.0%
TAGGAGAGAACACACTTTCC+TGG - chr3_3:47243228-47243247 Msa0455040:intron 45.0%
CTCATAGGAGAACTGCGAAT+TGG - chr3_3:47243279-47243298 Msa0455040:intron 45.0%
GTGGAATCGCAGATACAGTA+AGG - chr3_3:47243509-47243528 Msa0455040:intron 45.0%
!!! GTTTTTTTCTATTGGGCCGC+TGG - chr3_3:47243554-47243573 Msa0455040:intron 45.0%
TCAAAGAATCGGGTACGTAG+GGG + chr3_3:47243909-47243928 None:intergenic 45.0%
GTTCAAAGAATCGGGTACGT+AGG + chr3_3:47243911-47243930 None:intergenic 45.0%
TACGCCACGTTCAAAGAATC+GGG + chr3_3:47243919-47243938 None:intergenic 45.0%
GTACGCCACGTTCAAAGAAT+CGG + chr3_3:47243920-47243939 None:intergenic 45.0%
CAGAAGGGGTCTCAACAAAA+CGG - chr3_3:47244011-47244030 Msa0455040:intron 45.0%
AGAAGGGGTCTCAACAAAAC+GGG - chr3_3:47244012-47244031 Msa0455040:intron 45.0%
! ATGTGGGTCTTATCAGACAC+GGG + chr3_3:47244082-47244101 None:intergenic 45.0%
! GATGTGGGTCTTATCAGACA+CGG + chr3_3:47244083-47244102 None:intergenic 45.0%
CCTTGAGCCATGATAGATGT+GGG + chr3_3:47244098-47244117 None:intergenic 45.0%
CCACATCTATCATGGCTCAA+GGG - chr3_3:47244096-47244115 Msa0455040:intron 45.0%
GAACACTTGTGCGACCATAT+GGG - chr3_3:47244118-47244137 Msa0455040:intron 45.0%
TGAGTGCCAACGTTCATTAG+AGG - chr3_3:47244251-47244270 Msa0455040:CDS 45.0%
! AGAGTGCCTCTAATGAACGT+TGG + chr3_3:47244260-47244279 None:intergenic 45.0%
GCAGTCCAAAAAGCTGAAAG+GGG + chr3_3:47244288-47244307 None:intergenic 45.0%
GAGCAGTCCAAAAAGCTGAA+AGG + chr3_3:47244290-47244309 None:intergenic 45.0%
GAGTCTCCTTCGAGATCTAT+TGG - chr3_3:47244943-47244962 Msa0455040:intron 45.0%
AGCAGAAACCTAATAGCAGG+TGG + chr3_3:47244970-47244989 None:intergenic 45.0%
! GGGATTGGTGTGTGGATAAA+TGG + chr3_3:47245006-47245025 None:intergenic 45.0%
! ACACTATTGGGATTGGTGTG+TGG + chr3_3:47245014-47245033 None:intergenic 45.0%
CACACCAATCCCAATAGTGT+TGG - chr3_3:47245014-47245033 Msa0455040:intron 45.0%
ATGCCCAACACTATTGGGAT+TGG + chr3_3:47245021-47245040 None:intergenic 45.0%
ACCTCATGCCCAACACTATT+GGG + chr3_3:47245026-47245045 None:intergenic 45.0%
GAACATGTGTTTAACGGTGG+GGG - chr3_3:47245085-47245104 Msa0455040:intron 45.0%
!! CCTCATAAGCCGATTTTGTG+GGG - chr3_3:47245117-47245136 Msa0455040:intron 45.0%
TTCCCGTCCTTGAGATTTCA+AGG + chr3_3:47245296-47245315 None:intergenic 45.0%
AACTCATTAGCCAGCTTCCA+TGG + chr3_3:47245321-47245340 None:intergenic 45.0%
CCTCAATTATTCACCCGACA+GGG + chr3_3:47245525-47245544 None:intergenic 45.0%
TCCTCAATTATTCACCCGAC+AGG + chr3_3:47245526-47245545 None:intergenic 45.0%
AGTTACAGGTCCTGGTACTA+GGG + chr3_3:47245655-47245674 None:intergenic 45.0%
TAGTTACAGGTCCTGGTACT+AGG + chr3_3:47245656-47245675 None:intergenic 45.0%
ATCCAGCCTCTCCTAGTAAA+TGG + chr3_3:47245911-47245930 None:intergenic 45.0%
AAAATTCTGCTCGGTTCAGC+CGG + chr3_3:47246300-47246319 None:intergenic 45.0%
GCAGCCAAAGGTAAATAGAC+TGG - chr3_3:47246481-47246500 Msa0455040:CDS 45.0%
ACCACAGATAAATGCCAGCT+AGG - chr3_3:47246554-47246573 Msa0455040:CDS 45.0%
ACCTAGCTGGCATTTATCTG+TGG + chr3_3:47246558-47246577 None:intergenic 45.0%
ATAGAGCAGAATAGGGAGGA+AGG - chr3_3:47246580-47246599 Msa0455040:CDS 45.0%
TAGAGCAGAATAGGGAGGAA+GGG - chr3_3:47246581-47246600 Msa0455040:CDS 45.0%
!! AAAAATAAATCTAAAAAAAT+CGG - chr3_3:47243393-47243412 Msa0455040:CDS 5.0%
!! TATTATATTTATATTTATGT+GGG - chr3_3:47246076-47246095 Msa0455040:intron 5.0%
GTACATTCGCTTCACGCTCA+TGG - chr3_3:47239751-47239770 Msa0455040:three_prime_UTR 50.0%
CAATCGTCCGGTCCGAAAAA+CGG + chr3_3:47239797-47239816 None:intergenic 50.0%
TCATCCGGTTCAGATTGCTC+CGG + chr3_3:47239826-47239845 None:intergenic 50.0%
TCTGAACCGGATGACGATCT+CGG - chr3_3:47239832-47239851 Msa0455040:three_prime_UTR 50.0%
! TGGAAGGTGTAGTGGTGAAG+TGG - chr3_3:47240078-47240097 Msa0455040:CDS 50.0%
! GGAAGGTGTAGTGGTGAAGT+GGG - chr3_3:47240079-47240098 Msa0455040:CDS 50.0%
! GAAGGTGTAGTGGTGAAGTG+GGG - chr3_3:47240080-47240099 Msa0455040:CDS 50.0%
GTGGGGAAGAAGAGAAAGGT+TGG - chr3_3:47240097-47240116 Msa0455040:CDS 50.0%
!! GTTGGTAATGGGGTTTCGTG+TGG - chr3_3:47240115-47240134 Msa0455040:CDS 50.0%
!!! GGTGGTGGTGGTGATTTTGA+AGG - chr3_3:47240142-47240161 Msa0455040:intron 50.0%
!! GGTGGTGGTGATTTTGAAGG+TGG - chr3_3:47240145-47240164 Msa0455040:intron 50.0%
GTGAAGGAAAAGAGAGGGGT+TGG - chr3_3:47240178-47240197 Msa0455040:intron 50.0%
AAAGATGGCGTAGGTGCTTC+AGG - chr3_3:47240214-47240233 Msa0455040:intron 50.0%
TAGACGAGACGCTAGTGGTT+AGG - chr3_3:47240543-47240562 Msa0455040:intron 50.0%
AGACGAGACGCTAGTGGTTA+GGG - chr3_3:47240544-47240563 Msa0455040:intron 50.0%
GATTGAGGTGAACACGGTCA+CGG - chr3_3:47240655-47240674 Msa0455040:intron 50.0%
ATTGAGGTGAACACGGTCAC+GGG - chr3_3:47240656-47240675 Msa0455040:intron 50.0%
!! GGTTTTGGCCAAGACTCTAG+TGG - chr3_3:47240772-47240791 Msa0455040:intron 50.0%
TGGCCAAGACTCTAGTGGTT+AGG - chr3_3:47240777-47240796 Msa0455040:intron 50.0%
GGCCAAGACTCTAGTGGTTA+GGG - chr3_3:47240778-47240797 Msa0455040:intron 50.0%
GGAAGCAATGTTGAAGGCAG+CGG - chr3_3:47240799-47240818 Msa0455040:intron 50.0%
GGTTGAGGTGAAGACAGTCA+CGG - chr3_3:47240889-47240908 Msa0455040:intron 50.0%
GTTGAGGTGAAGACAGTCAC+GGG - chr3_3:47240890-47240909 Msa0455040:intron 50.0%
TGAAGACAGTCACGGGAGAA+AGG - chr3_3:47240897-47240916 Msa0455040:intron 50.0%
!! GTGGAGAATGGTAATGGGCT+TGG - chr3_3:47240944-47240963 Msa0455040:intron 50.0%
GGGTTGAAGAATAGAGGGGT+TGG - chr3_3:47241025-47241044 Msa0455040:intron 50.0%
ACTGGATGTTGGAAAGGTCG+AGG - chr3_3:47241075-47241094 Msa0455040:intron 50.0%
ATTCACTGCACCATCTGCCA+TGG + chr3_3:47241388-47241407 None:intergenic 50.0%
CAACAGTGAAGAGCCCTTAG+GGG - chr3_3:47241931-47241950 Msa0455040:intron 50.0%
TTTGCTTCCCTGTCCCCTAA+GGG + chr3_3:47241947-47241966 None:intergenic 50.0%
! CAATGGAGAAAGGTGTGGTG+AGG - chr3_3:47242066-47242085 Msa0455040:intron 50.0%
! AGAAAGGTGTGGTGAGGAGT+TGG - chr3_3:47242072-47242091 Msa0455040:intron 50.0%
! GATATGCCACCTTCTGGTTG+GGG + chr3_3:47242869-47242888 None:intergenic 50.0%
TCTAATTGGAGCTGCAGGTG+TGG + chr3_3:47242934-47242953 None:intergenic 50.0%
CACCTGCAGCTCCAATTAGA+TGG - chr3_3:47242934-47242953 Msa0455040:intron 50.0%
!! GCACCGGTCCAATACCATTT+TGG + chr3_3:47242980-47242999 None:intergenic 50.0%
GCTAACCACTCTTGAAGTCC+AGG - chr3_3:47242998-47243017 Msa0455040:intron 50.0%
TCGTTTGCCTCTAGTATCCC+AGG + chr3_3:47243138-47243157 None:intergenic 50.0%
ACTAGAGGCAAACGAACAGG+CGG - chr3_3:47243143-47243162 Msa0455040:intron 50.0%
ATTCGCAGTCTCAAGCGTAC+CGG - chr3_3:47243360-47243379 Msa0455040:CDS 50.0%
CTCAAGCGTACCGGAACAAT+CGG - chr3_3:47243369-47243388 Msa0455040:CDS 50.0%
TCAAGCGTACCGGAACAATC+GGG - chr3_3:47243370-47243389 Msa0455040:CDS 50.0%
ATTGGGCCGCTGGACTTATA+TGG - chr3_3:47243564-47243583 Msa0455040:intron 50.0%
TTGGGCCGCTGGACTTATAT+GGG - chr3_3:47243565-47243584 Msa0455040:intron 50.0%
! TGGTACGCTATTTCGGTTCG+CGG + chr3_3:47243874-47243893 None:intergenic 50.0%
! CGTAGGGGGGTATACATAGT+TGG + chr3_3:47243894-47243913 None:intergenic 50.0%
AAAGAATCGGGTACGTAGGG+GGG + chr3_3:47243907-47243926 None:intergenic 50.0%
CAAAGAATCGGGTACGTAGG+GGG + chr3_3:47243908-47243927 None:intergenic 50.0%
CGTACCCGATTCTTTGAACG+TGG - chr3_3:47243912-47243931 Msa0455040:intron 50.0%
!! TTCGATTCGGTACGTGGTAC+GGG + chr3_3:47243955-47243974 None:intergenic 50.0%
!! GTTCGATTCGGTACGTGGTA+CGG + chr3_3:47243956-47243975 None:intergenic 50.0%
!! CGTTTTGTTGAGACCCCTTC+TGG + chr3_3:47244013-47244032 None:intergenic 50.0%
GAAGGGGTCTCAACAAAACG+GGG - chr3_3:47244013-47244032 Msa0455040:intron 50.0%
CCCACATCTATCATGGCTCA+AGG - chr3_3:47244095-47244114 Msa0455040:intron 50.0%
CCCTTGAGCCATGATAGATG+TGG + chr3_3:47244099-47244118 None:intergenic 50.0%
GGAACACTTGTGCGACCATA+TGG - chr3_3:47244117-47244136 Msa0455040:intron 50.0%
CTATTGGGCCACCTGCTATT+AGG - chr3_3:47244959-47244978 Msa0455040:intron 50.0%
! GTGTGTGGATAAATGGTGGG+TGG + chr3_3:47244999-47245018 None:intergenic 50.0%
! TCCCAATAGTGTTGGGCATG+AGG - chr3_3:47245022-47245041 Msa0455040:intron 50.0%
CACCTCATGCCCAACACTAT+TGG + chr3_3:47245027-47245046 None:intergenic 50.0%
! CAATAGTGTTGGGCATGAGG+TGG - chr3_3:47245025-47245044 Msa0455040:intron 50.0%
! CCCCACAAAATCGGCTTATG+AGG + chr3_3:47245120-47245139 None:intergenic 50.0%
TCTCAAGGACGGGAAAACCA+TGG - chr3_3:47245301-47245320 Msa0455040:CDS 50.0%
ATGGTGACTCAACTCCCTGT+CGG - chr3_3:47245508-47245527 Msa0455040:CDS 50.0%
CCCTGTCGGGTGAATAATTG+AGG - chr3_3:47245522-47245541 Msa0455040:CDS 50.0%
GTACTGCATACCCTAGTACC+AGG - chr3_3:47245642-47245661 Msa0455040:CDS 50.0%
! TGCCATTTACTAGGAGAGGC+TGG - chr3_3:47245906-47245925 Msa0455040:intron 50.0%
AACGGTTCGAAATTGGGCCG+CGG + chr3_3:47239779-47239798 None:intergenic 55.0%
!! CGTTTTTCGGACCGGACGAT+TGG - chr3_3:47239795-47239814 Msa0455040:three_prime_UTR 55.0%
! TTTTCGGACCGGACGATTGG+CGG - chr3_3:47239798-47239817 Msa0455040:three_prime_UTR 55.0%
GGAACCGGAGCAATCTGAAC+CGG - chr3_3:47239819-47239838 Msa0455040:three_prime_UTR 55.0%
!! GGTAATGGGGTTTCGTGTGG+TGG - chr3_3:47240118-47240137 Msa0455040:CDS 55.0%
AATGGGGTTTCGTGTGGTGG+TGG - chr3_3:47240121-47240140 Msa0455040:CDS 55.0%
TGGCGTAGGTGCTTCAGGTA+TGG - chr3_3:47240219-47240238 Msa0455040:intron 55.0%
CCACTAGCGTCTCGTCTACA+CGG + chr3_3:47240541-47240560 None:intergenic 55.0%
TGAACACGGTCACGGGAGAA+AGG - chr3_3:47240663-47240682 Msa0455040:intron 55.0%
! CACGGGAGAAAGGCATGGAA+AGG - chr3_3:47240673-47240692 Msa0455040:intron 55.0%
AGCGGCTGAAGAGAAGGTGA+GGG - chr3_3:47240817-47240836 Msa0455040:intron 55.0%
AGCGGAGCTCATGAAGGTTG+TGG - chr3_3:47240925-47240944 Msa0455040:intron 55.0%
!! TAGAGGGGTTGGTAATGGGG+AGG - chr3_3:47241036-47241055 Msa0455040:intron 55.0%
GCTGCTGCAGAACTGGATGT+TGG - chr3_3:47241064-47241083 Msa0455040:intron 55.0%
TGAAGAGCCCTTAGGGGACA+GGG - chr3_3:47241937-47241956 Msa0455040:intron 55.0%
CTTTGCTTCCCTGTCCCCTA+AGG + chr3_3:47241948-47241967 None:intergenic 55.0%
GGACAGGGAAGCAAAGCTGA+AGG - chr3_3:47241952-47241971 Msa0455040:intron 55.0%
CAGGGAAGCAAAGCTGAAGG+AGG - chr3_3:47241955-47241974 Msa0455040:intron 55.0%
! TAGTGGGGATGTTGATGGGG+AGG - chr3_3:47242195-47242214 Msa0455040:intron 55.0%
! CACTGGCCCGAAAGCCATTT+TGG + chr3_3:47242830-47242849 None:intergenic 55.0%
TGCTGCCTGGACTTCAAGAG+TGG + chr3_3:47243006-47243025 None:intergenic 55.0%
TACGCCAACGTACCGCGAAT+CGG + chr3_3:47243315-47243334 None:intergenic 55.0%
AGCGGCCCATATAAGTCCAG+CGG + chr3_3:47243573-47243592 None:intergenic 55.0%
TTCGGTACGTGGTACGGGTT+CGG + chr3_3:47243950-47243969 None:intergenic 55.0%
!! TCGCAGTTCGATTCGGTACG+TGG + chr3_3:47243961-47243980 None:intergenic 55.0%
GACAGACCCACAAGCCAGAA+GGG - chr3_3:47243996-47244015 Msa0455040:intron 55.0%
ACAGACCCACAAGCCAGAAG+GGG - chr3_3:47243997-47244016 Msa0455040:intron 55.0%
!! TGAGACCCCTTCTGGCTTGT+GGG + chr3_3:47244005-47244024 None:intergenic 55.0%
!! TTGAGACCCCTTCTGGCTTG+TGG + chr3_3:47244006-47244025 None:intergenic 55.0%
GGTCTCAACAAAACGGGGAG+AGG - chr3_3:47244018-47244037 Msa0455040:intron 55.0%
GGTGGCCCAATAGATCTCGA+AGG + chr3_3:47244952-47244971 None:intergenic 55.0%
GACGGGAAAACCATGGAAGC+TGG - chr3_3:47245308-47245327 Msa0455040:CDS 55.0%
TGGTGACTCAACTCCCTGTC+GGG - chr3_3:47245509-47245528 Msa0455040:CDS 55.0%
! GGAAATCGGACGAGGAGTGT+CGG + chr3_3:47246149-47246168 None:intergenic 55.0%
GCTTCACGCTCATGGAACCG+CGG - chr3_3:47239759-47239778 Msa0455040:three_prime_UTR 60.0%
CGAGCTCCGAGATCGTCATC+CGG + chr3_3:47239841-47239860 None:intergenic 60.0%
!! GTTTCGTGTGGTGGTGGTGG+TGG - chr3_3:47240127-47240146 Msa0455040:CDS 60.0%
CCGTGTAGACGAGACGCTAG+TGG - chr3_3:47240538-47240557 Msa0455040:intron 60.0%
ACGGTCACGGGAGAAAGGCA+TGG - chr3_3:47240668-47240687 Msa0455040:intron 60.0%
GAAGGCAGCGGCTGAAGAGA+AGG - chr3_3:47240811-47240830 Msa0455040:intron 60.0%
CAGCGGCTGAAGAGAAGGTG+AGG - chr3_3:47240816-47240835 Msa0455040:intron 60.0%
! CACGGGAGAAAGGCGTGAAG+CGG - chr3_3:47240907-47240926 Msa0455040:intron 60.0%
GCGTGAAGCGGAGCTCATGA+AGG - chr3_3:47240919-47240938 Msa0455040:intron 60.0%
GCTGCAGTTGGGCACGCAAA+AGG - chr3_3:47240992-47241011 Msa0455040:intron 60.0%
! GGCTTGTGCTGCTGCAGAAC+TGG - chr3_3:47241057-47241076 Msa0455040:intron 60.0%
GTGAAGAGCCCTTAGGGGAC+AGG - chr3_3:47241936-47241955 Msa0455040:intron 60.0%
GATGGGGAGGCTTGTGCTGT+TGG - chr3_3:47242208-47242227 Msa0455040:intron 60.0%
CAACTGTCGCCCCAACCAGA+AGG - chr3_3:47242857-47242876 Msa0455040:intron 60.0%
!! CGAACCGATTCGCGGTACGT+TGG - chr3_3:47243308-47243327 Msa0455040:intron 60.0%
TTCGCGGTACGTTGGCGTAC+TGG - chr3_3:47243316-47243335 Msa0455040:intron 60.0%
TCGGTACGTGGTACGGGTTC+GGG + chr3_3:47243949-47243968 None:intergenic 60.0%
GGACAGACCCACAAGCCAGA+AGG - chr3_3:47243995-47244014 Msa0455040:intron 60.0%
GACCGGACGATTGGCGGAAC+CGG - chr3_3:47239804-47239823 Msa0455040:three_prime_UTR 65.0%
CTCCGGTTCCGCCAATCGTC+CGG + chr3_3:47239809-47239828 None:intergenic 65.0%
!! GGGGTTTCGTGTGGTGGTGG+TGG - chr3_3:47240124-47240143 Msa0455040:CDS 65.0%
!! TCGTGTGGTGGTGGTGGTGG+TGG - chr3_3:47240130-47240149 Msa0455040:CDS 65.0%
CTGTCGCCCCAACCAGAAGG+TGG - chr3_3:47242860-47242879 Msa0455040:intron 65.0%
!! GGTTCGCGCGAACCGATTCG+CGG - chr3_3:47243300-47243319 Msa0455040:intron 65.0%
GTGGTACGGGTTCGGGTACG+CGG + chr3_3:47243942-47243961 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 47239730 47246674 47239730 ID=Msa0455040;Name=Msa0455040
chr3_3 mRNA 47239730 47246674 47239730 ID=Msa0455040-mRNA-1;Parent=Msa0455040;Name=Msa0455040-mRNA-1;_AED=0.11;_eAED=0.11;_QI=40|0.4|0.33|0.66|1|1|6|180|669
chr3_3 exon 47239730 47240160 47239730 ID=Msa0455040-mRNA-1:exon:8798;Parent=Msa0455040-mRNA-1
chr3_3 exon 47242212 47242287 47242212 ID=Msa0455040-mRNA-1:exon:8797;Parent=Msa0455040-mRNA-1
chr3_3 exon 47243325 47243461 47243325 ID=Msa0455040-mRNA-1:exon:8796;Parent=Msa0455040-mRNA-1
chr3_3 exon 47244121 47244564 47244121 ID=Msa0455040-mRNA-1:exon:8795;Parent=Msa0455040-mRNA-1
chr3_3 exon 47245244 47245879 47245244 ID=Msa0455040-mRNA-1:exon:8794;Parent=Msa0455040-mRNA-1
chr3_3 exon 47246169 47246674 47246169 ID=Msa0455040-mRNA-1:exon:8793;Parent=Msa0455040-mRNA-1
chr3_3 five_prime_UTR 47246635 47246674 47246635 ID=Msa0455040-mRNA-1:five_prime_utr;Parent=Msa0455040-mRNA-1
chr3_3 CDS 47246169 47246634 47246169 ID=Msa0455040-mRNA-1:cds;Parent=Msa0455040-mRNA-1
chr3_3 CDS 47245244 47245879 47245244 ID=Msa0455040-mRNA-1:cds;Parent=Msa0455040-mRNA-1
chr3_3 CDS 47244121 47244564 47244121 ID=Msa0455040-mRNA-1:cds;Parent=Msa0455040-mRNA-1
chr3_3 CDS 47243325 47243461 47243325 ID=Msa0455040-mRNA-1:cds;Parent=Msa0455040-mRNA-1
chr3_3 CDS 47242212 47242287 47242212 ID=Msa0455040-mRNA-1:cds;Parent=Msa0455040-mRNA-1
chr3_3 CDS 47239910 47240160 47239910 ID=Msa0455040-mRNA-1:cds;Parent=Msa0455040-mRNA-1
chr3_3 three_prime_UTR 47239730 47239909 47239730 ID=Msa0455040-mRNA-1:three_prime_utr;Parent=Msa0455040-mRNA-1
Gene Sequence

>Msa0455040

ATGGAACCGCGGCCCAATTTCGAACCGTTTTTCGGACCGGACGATTGGCGGAACCGGAGCAATCTGAACCGGATGACGATCTCGGAGCTCGTATCCGAGCTCCGAGATACGTTTATAAGGTCAGATTTCGACCTTGTTGAAGAAACCCTAATTGCTAGGGAAGAAAAGTTAAAAGGTGAGATTGATGAGAAGAAGAATGAAATTGAGTTGTTAAAAGAGAAATTTGATATGTTAATGTTGGAAAAGGTTAGTGTTGAAATGGAGCTGAAGAGAGTAAAGGAAGAAAGGAGTAATGGGGAATTAGGGTTTGGAAGGTGTAGTGGTGAAGTGGGGAAGAAGAGAAAGGTTGGTAATGGGGTTTCGTGTGGTGGTGGTGGTGGTGGTGATTTTGAAGGTGGAAGAGTTTTGGTGAAGGAAAAGAGAGGGGTTGGTGAACAAAGCAAGAAAGATGGCGTAGGTGCTTCAGGGGATAATTTTGACCGTGTAGACGAGACGCTAGTGGTTAGGGAAGCAATGTTGAAGCAAGCAACTGAAGAGAAGTTGAGGGAACTACTAGAGAATAGTCGATTCAAGAGTTGGGGCATGCTCAATTTTGAGATTGAGGTGAACACGGTCACGGGAGAAAGGCATGGAAAGGAGATTATGAAGCTTGGGGAGAATGAAAAATACAAAATTGAGGTGTTGAAGAATAGAGGGGAAGATGAAAACGTTGAGGTTTTGGCCAAGACTCTAGTGGTTAGGGAAGCAATGTTGAAGGCAGCGGCTGAAGAGAAGGTGAGGGAATTACAAGAGAATAATCAATTCAAGGGTTGGGGAAGGCTCAATTTTGAGGTTGAGGTGAAGACAGTCACGGGAGAAAGGCGTGAAGCGGAGCTCATGAAGGTTGTGGAGAATGGTAATGGGCTTGGATTAAATGGTGGAAAGGTTTTGAAAGCTGCAGTTGGGCACGCAAAAGGCAAATTTGAGGGGTTGAAGAATAGAGGGGTTGGTAATGGGGAGGCTTGTGCTGCTGCAGAACTGGATGTTGGAAAGGTCGAGGTTTTGGCCAAAAAGAACAGATTTGTTGGTGAACCAGGCAAGAAAGATTCTCTAGGTTCTTCTGATACTGAGCGGCTAAGTTCATCAAGAGCAGTAAAAGCAAACCTTGCAACAAGATTGGCTAAACCCACTGATATAATGTCAGGTAATGATATCAACAGTGAAGAGCCCTTAGGGGACAGGGAAGCAAAGCTGAAGGAGGAAATTGAAGAGAAGATTAGGTTACTGCACAGGAAGAATCAATTTAAGAGCTTGGGACTACATGATTTTGATGTTGAGGCACAGAAAGTCAATGGAGAAAGGTGTGGTGAGGAGTTGGTAAAGTTTAGGGAGAATAGTAATGGGATTGACCTAGACGATGGGAATGTCTTGAAAGCTGAATTGGGGAATGAAAGTCACAAGCTTGAGGTGGTGAAGAATAGTGGGGATGTTGATGGGGAGGCTTGTGCTGTTGGTGAACTCAAAGGTGAAAATGTCAAGGATTCGGCTGAAAGGAAAAGATTGGCTGCTCCAATTAGATGGTTTTACCTCTTCAAACCTAACCAAAATGGTATTGGACCGGTGCTAACCACTCTTGAAGTCCAGGCAGCAACTAAAATTGACAGTGGTGTTTGTGGCAGCAAGATGTTGAACCAAATTGGAGCGGGAACACTTGTGCGACCATATGGGCCCAGTTCAATATTAACTGTTACTTATATAGGTGATATTGATAAAGATGAAGATACTGGGGAAAAAAGTTCATTTGGAGCCGTTCGAAGAAACTTTGCAACAAAACCGGCTGAACCGAGCAGAATTTTTAACAGATATTCTGTTTCTTCTCTTGGATTAGCTGCAACATTGGATATCTTGGAAGACTTAAGTAGTGATAGTTCTTCCAGTTCCAATTCTAGTTCCAGTTCCTCTTCTGAAGAATTTGATTTCACATTTCTTAACAGCAACAAGAAGATAAAAACCAATGGCAGCCAAAGGTAA

Protein sequence

>Msa0455040

MEPRPNFEPFFGPDDWRNRSNLNRMTISELVSELRDTFIRSDFDLVEETLIAREEKLKGEIDEKKNEIELLKEKFDMLMLEKVSVEMELKRVKEERSNGELGFGRCSGEVGKKRKVGNGVSCGGGGGGDFEGGRVLVKEKRGVGEQSKKDGVGASGDNFDRVDETLVVREAMLKQATEEKLRELLENSRFKSWGMLNFEIEVNTVTGERHGKEIMKLGENEKYKIEVLKNRGEDENVEVLAKTLVVREAMLKAAAEEKVRELQENNQFKGWGRLNFEVEVKTVTGERREAELMKVVENGNGLGLNGGKVLKAAVGHAKGKFEGLKNRGVGNGEACAAAELDVGKVEVLAKKNRFVGEPGKKDSLGSSDTERLSSSRAVKANLATRLAKPTDIMSGNDINSEEPLGDREAKLKEEIEEKIRLLHRKNQFKSLGLHDFDVEAQKVNGERCGEELVKFRENSNGIDLDDGNVLKAELGNESHKLEVVKNSGDVDGEACAVGELKGENVKDSAERKRLAAPIRWFYLFKPNQNGIGPVLTTLEVQAATKIDSGVCGSKMLNQIGAGTLVRPYGPSSILTVTYIGDIDKDEDTGEKSSFGAVRRNFATKPAEPSRIFNRYSVSSLGLAATLDILEDLSSDSSSSSNSSSSSSSEEFDFTFLNSNKKIKTNGSQR*