AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0815750

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0815750 MtrunA17_Chr5g0434371 95.444 834 25 3 6 826 2 835 0.0 1631
Msa0815750 MtrunA17_Chr4g0063141 34.247 730 448 13 40 749 10 727 5.47e-131 412
Msa0815750 MtrunA17_Chr2g0277651 30.843 830 525 18 27 824 14 826 3.61e-117 375
Msa0815750 MtrunA17_Chr1g0148981 30.686 743 408 13 64 709 44 776 9.85e-103 340
Msa0815750 MtrunA17_Chr3g0138671 36.152 473 283 9 69 532 40 502 3.64e-90 297
Msa0815750 MtrunA17_Chr8g0356081 34.038 473 295 7 62 526 29 492 5.85e-83 280
Msa0815750 MtrunA17_Chr2g0286031 28.326 699 430 20 155 822 17 675 1.35e-74 256
Msa0815750 MtrunA17_Chr3g0138131 34.974 386 240 5 64 445 54 432 3.02e-65 226
Msa0815750 MtrunA17_Chr3g0138141 32.746 284 186 2 471 749 23 306 1.41e-38 149
Msa0815750 MtrunA17_Chr4g0063071 22.177 248 188 3 300 543 5 251 1.65e-17 83.6
Msa0815750 MtrunA17_Chr4g0062571 30.412 194 120 5 113 306 9 187 9.76e-17 80.5
Msa0815750 MtrunA17_Chr2g0284901 42.857 105 59 1 632 736 28 131 2.31e-16 82.8
Msa0815750 MtrunA17_Chr2g0284901 32.407 108 73 0 529 636 21 128 6.49e-12 68.6
Msa0815750 MtrunA17_Chr4g0062561 28.761 226 143 6 113 334 9 220 2.63e-16 84.0
Msa0815750 MtrunA17_Chr1g0181121 26.816 179 128 2 273 448 315 493 1.33e-15 81.3
Msa0815750 MtrunA17_Chr5g0418551 35.897 156 95 2 578 728 53 208 2.44e-15 76.6
Msa0815750 MtrunA17_Chr5g0418551 34.014 147 91 2 557 697 101 247 1.67e-13 71.2
Msa0815750 MtrunA17_Chr5g0418551 32.500 160 104 2 576 733 87 244 8.70e-13 69.3
Msa0815750 MtrunA17_Chr5g0405451 38.312 154 89 2 582 729 272 425 3.06e-15 79.0
Msa0815750 MtrunA17_Chr4g0073941 21.272 456 281 13 73 450 99 554 8.23e-15 78.6
Msa0815750 MtrunA17_Chr4g0001481 21.078 408 247 11 115 450 155 559 6.28e-14 75.9
Msa0815750 MtrunA17_Chr6g0461061 31.288 163 98 3 570 728 297 449 3.60e-13 73.2
Msa0815750 MtrunA17_Chr4g0028861 22.564 195 148 2 258 449 380 574 3.72e-13 73.2
Msa0815750 MtrunA17_Chr5g0406201 32.227 211 137 2 525 729 247 457 4.29e-13 72.8
Msa0815750 MtrunA17_Chr2g0326871 23.196 194 146 2 258 448 333 526 1.39e-12 71.6
Msa0815750 MtrunA17_Chr4g0073161 30.131 229 112 9 554 737 24 249 1.85e-12 70.9
Msa0815750 MtrunA17_Chr4g0049351 30.208 192 130 3 548 735 25 216 1.97e-12 70.9
Msa0815750 MtrunA17_Chr7g0274241 29.384 211 144 4 520 728 64 271 2.86e-12 69.7
Msa0815750 MtrunA17_Chr7g0228181 24.490 196 140 3 257 449 311 501 6.66e-12 69.3
Msa0815750 MtrunA17_Chr2g0286041 36.735 98 61 1 57 154 36 132 7.10e-12 63.5
Msa0815750 MtrunA17_Chr5g0443471 34.375 96 63 0 545 640 49 144 7.11e-12 68.6
Msa0815750 MtrunA17_Chr5g0443471 44.737 76 42 0 654 729 61 136 3.28e-11 66.6
Msa0815750 MtrunA17_Chr3g0127131 40.449 89 53 0 554 642 245 333 1.13e-11 67.4
Msa0815750 MtrunA17_Chr1g0211241 30.052 193 131 3 543 731 132 324 1.92e-11 67.8
Msa0815750 MtrunA17_Chr4g0042731 55.000 60 27 0 670 729 46 105 5.04e-11 65.9
Msa0815750 MtrunA17_Chr4g0064931 29.902 204 133 4 557 750 47 250 5.43e-11 66.2
Msa0815750 MtrunA17_Chr2g0303671 37.815 119 72 1 598 714 167 285 8.52e-11 64.3
Msa0815750 MtrunA17_Chr8g0380551 30.233 172 105 5 606 772 71 232 8.66e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0815750 AT3G02850.1 71.111 810 211 4 33 824 23 827 0.0 1207
Msa0815750 AT5G37500.1 66.749 806 252 7 33 824 12 815 0.0 1126
Msa0815750 AT5G37500.2 64.976 828 252 8 33 824 12 837 0.0 1114
Msa0815750 AT3G02850.2 72.230 731 181 3 27 740 17 742 0.0 1112
Msa0815750 AT5G37500.3 67.742 775 221 5 79 824 9 783 0.0 1102
Msa0815750 AT5G37500.4 67.801 705 195 5 33 707 12 714 0.0 989
Msa0815750 AT3G02850.3 73.519 574 130 3 27 583 17 585 0.0 885
Msa0815750 AT2G26650.1 35.162 711 428 12 35 730 10 702 2.04e-129 408
Msa0815750 AT2G25600.1 33.576 688 438 8 64 742 63 740 2.08e-119 382
Msa0815750 AT4G32500.1 32.551 682 439 8 64 735 61 731 2.08e-114 369
Msa0815750 AT4G22200.1 31.380 768 474 14 72 822 66 797 2.10e-113 364
Msa0815750 AT2G26650.2 35.073 613 370 9 130 730 1 597 6.07e-111 356
Msa0815750 AT5G46240.1 36.364 473 284 7 62 526 40 503 8.44e-94 309
Msa0815750 AT4G18290.1 36.076 474 284 8 62 526 40 503 9.18e-90 298
Msa0815750 AT4G18290.2 36.076 474 284 8 62 526 51 514 9.30e-90 299
Msa0815750 AT4G32650.2 36.876 461 266 10 72 520 77 524 9.90e-82 274
Msa0815750 AT4G32650.1 36.876 461 266 10 72 520 77 524 1.47e-81 275
Msa0815750 AT4G32650.3 36.876 461 266 10 72 520 77 524 1.49e-81 275
Msa0815750 AT4G22200.2 32.762 525 328 10 72 583 66 578 8.10e-79 266
Msa0815750 AT4G18950.2 46.591 88 47 0 642 729 42 129 2.66e-14 76.6
Msa0815750 AT4G18950.1 46.591 88 47 0 642 729 42 129 2.98e-14 76.6
Msa0815750 AT3G58760.6 42.593 108 56 3 654 761 60 161 6.18e-14 74.7
Msa0815750 AT3G58760.1 42.593 108 56 3 654 761 60 161 1.46e-13 74.3
Msa0815750 AT3G58760.2 42.593 108 56 3 654 761 123 224 1.47e-13 74.3
Msa0815750 AT3G58760.4 42.593 108 56 3 654 761 123 224 1.47e-13 74.3
Msa0815750 AT2G14255.1 29.612 206 141 3 534 735 12 217 2.10e-13 74.3
Msa0815750 AT3G58760.3 42.593 108 56 3 654 761 123 224 2.57e-13 73.9
Msa0815750 AT3G58760.5 42.593 108 56 3 654 761 123 224 2.57e-13 73.9
Msa0815750 AT2G03430.1 33.333 156 99 2 578 728 46 201 4.71e-13 70.1
Msa0815750 AT2G03430.1 32.653 147 94 2 557 698 94 240 1.58e-11 65.9
Msa0815750 AT2G03430.1 34.109 129 80 1 605 728 40 168 2.75e-11 65.1
Msa0815750 AT3G04710.3 32.778 180 113 4 553 728 320 495 4.76e-13 73.6
Msa0815750 AT3G04710.1 31.188 202 118 6 553 747 96 283 5.78e-13 72.4
Msa0815750 AT5G20350.1 30.093 216 147 3 520 731 5 220 1.35e-12 72.0
Msa0815750 AT2G24610.1 25.000 180 132 2 272 448 348 527 2.81e-12 70.9
Msa0815750 AT2G24610.2 25.000 180 132 2 272 448 363 542 3.21e-12 70.9
Msa0815750 AT5G66055.1 40.000 135 77 4 582 713 263 396 3.75e-12 69.7
Msa0815750 AT2G31820.1 28.571 175 119 4 575 743 254 428 4.48e-12 70.1
Msa0815750 AT2G28260.2 23.590 195 146 2 257 448 283 477 4.96e-12 70.1
Msa0815750 AT2G28260.1 23.590 195 146 2 257 448 323 517 5.19e-12 70.1
Msa0815750 AT5G57940.1 27.072 181 129 3 273 450 366 546 9.92e-12 69.3
Msa0815750 AT5G57940.2 27.072 181 129 3 273 450 366 546 9.92e-12 69.3
Msa0815750 AT3G04710.2 31.188 202 117 7 553 747 96 282 1.12e-11 68.6
Msa0815750 AT5G57940.3 27.072 181 129 3 273 450 359 539 1.12e-11 68.9
Msa0815750 AT2G31800.1 31.148 122 81 2 651 772 83 201 6.60e-11 66.2

Find 168 sgRNAs with CRISPR-Local

Find 808 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATTTCTTCTTTGTTCTTT+TGG 0.087746 5_3:+49422600 None:intergenic
ACCTTTGTCATTGATCTTCT+TGG 0.183191 5_3:-49428749 Msa0815750:CDS
CATGAGGAATTCTTTCTTCC+TGG 0.186483 5_3:-49425127 Msa0815750:CDS
TCCCATTTCTATTCGATCTA+AGG 0.234403 5_3:-49426463 Msa0815750:intron
GGGAACACTGTGCACTTCTT+TGG 0.240600 5_3:+49422639 None:intergenic
GGCTCAAATTTATATTGTTA+TGG 0.245724 5_3:-49429264 Msa0815750:CDS
TATTGACGTTAGCATGATTA+AGG 0.255569 5_3:-49422469 Msa0815750:CDS
TCACGTGAATTGATGATATA+AGG 0.255921 5_3:+49436899 None:intergenic
GTGTAGCCCTCTTGGGATTC+AGG 0.256246 5_3:+49427705 None:intergenic
AGTTCAGAGAAATTGATATT+TGG 0.258991 5_3:-49427641 Msa0815750:CDS
CAGATTCTAGCTTTCCAATA+TGG 0.267039 5_3:+49424225 None:intergenic
GATCAAAGACTGAAAAGTTT+AGG 0.268961 5_3:-49426617 Msa0815750:CDS
TATCAGTACCTGTAATTTCT+TGG 0.280875 5_3:+49422780 None:intergenic
CTTTCATCTTTCAGGTTACT+AGG 0.281282 5_3:-49425153 Msa0815750:intron
GAGATTCGGATTATCTTAAA+AGG 0.294278 5_3:-49423638 Msa0815750:CDS
GTTTCATTTGACATGGTTCT+TGG 0.295468 5_3:-49426681 Msa0815750:CDS
AGGAAGTGAGGTACCTATTA+TGG 0.297786 5_3:-49427890 Msa0815750:CDS
TTCTTCACCCCAATGGAGTT+TGG 0.299257 5_3:-49429226 Msa0815750:CDS
TGCATTAGGCAATCATATTA+TGG 0.301008 5_3:-49422416 Msa0815750:exon
CAAGGAGGCAAATTATTATA+TGG 0.303794 5_3:+49422382 None:intergenic
ATTTGATCTTGTTAATGTTA+TGG 0.305566 5_3:-49422328 Msa0815750:three_prime_UTR
GGATATCCGTGAACAAATAA+AGG 0.308926 5_3:-49426544 Msa0815750:CDS
TACCTTAGATCGAATAGAAA+TGG 0.310873 5_3:+49426461 None:intergenic
GAAGAAATGGAATAGTATTA+TGG 0.316456 5_3:-49422587 Msa0815750:CDS
CTAGAGCGCAACAGCTCATT+TGG 0.327681 5_3:-49424626 Msa0815750:CDS
ATCTTCTTGGATGTATGCCC+TGG 0.329468 5_3:-49428736 Msa0815750:CDS
TATATAATCTGATCCATAAT+AGG 0.329517 5_3:+49427877 None:intergenic
CACTGACGCTGCAGTCCTTC+AGG 0.339626 5_3:-49426490 Msa0815750:CDS
ATCAGTACCTGTAATTTCTT+GGG 0.340308 5_3:+49422781 None:intergenic
GCTCAAATTTATATTGTTAT+GGG 0.342845 5_3:-49429263 Msa0815750:CDS
CTATCCATGTGTAGCCCTCT+TGG 0.343434 5_3:+49427697 None:intergenic
ATAGGAGGAAATAACGGTTT+TGG 0.346170 5_3:+49436812 None:intergenic
CGTAATTTCACAGATAACTT+TGG 0.350102 5_3:-49423786 Msa0815750:intron
AATCTGATTGAGAAAGAGTT+AGG 0.352610 5_3:-49436527 Msa0815750:CDS
TCGTTATAAATCCTCATAAC+AGG 0.354309 5_3:-49436466 Msa0815750:intron
GAGATCATCTTCTTCTTCTT+CGG 0.354755 5_3:-49436615 Msa0815750:CDS
TCAATTACAGTACCTGTCTT+TGG 0.359155 5_3:+49423488 None:intergenic
GCCAGAGAATCTCTTTATAC+TGG 0.359937 5_3:-49429188 Msa0815750:CDS
TTTAGTCAATGAAATGCATT+AGG 0.371280 5_3:-49422430 Msa0815750:exon
CCAAAAGAACAAAGAAGAAA+TGG 0.374118 5_3:-49422600 Msa0815750:CDS
AGAATCTGATCTTGCTTTGA+AGG 0.374486 5_3:-49424210 Msa0815750:CDS
AAAATTTACCGCAGAGCAAT+AGG 0.375503 5_3:+49429067 None:intergenic
TATTATGGATCAGATTATAT+AGG 0.375807 5_3:-49427875 Msa0815750:CDS
ATCAAAGACTGAAAAGTTTA+GGG 0.382228 5_3:-49426616 Msa0815750:CDS
TATCCATGTGTAGCCCTCTT+GGG 0.383791 5_3:+49427698 None:intergenic
CCTGTAATTTCTTGGGGAAA+AGG 0.384238 5_3:+49422788 None:intergenic
GTAATTTCACAGATAACTTT+GGG 0.384971 5_3:-49423785 Msa0815750:intron
ATCTGAAGGATTAATCTTCA+TGG 0.398968 5_3:-49423547 Msa0815750:CDS
ATTATGGATCAGATTATATA+GGG 0.408607 5_3:-49427874 Msa0815750:CDS
CAGGGAAAAGAGTCTATTAG+AGG 0.414386 5_3:-49424275 Msa0815750:CDS
ATGAGGAATTCTTTCTTCCT+GGG 0.415335 5_3:-49425126 Msa0815750:CDS
TCTACGATAACAGCTAATTA+AGG 0.416749 5_3:+49436767 None:intergenic
CTGTAATTTCTTGGGGAAAA+GGG 0.418226 5_3:+49422789 None:intergenic
CTCTTTATACTGGATATTGT+AGG 0.426388 5_3:-49429178 Msa0815750:CDS
TGATTGAGAAAGAGTTAGGT+TGG 0.426558 5_3:-49436523 Msa0815750:CDS
AGCTAATTAAGGTCGTGTTA+TGG 0.440539 5_3:+49436778 None:intergenic
TTGGATCCCACGGATGGAAC+GGG 0.441874 5_3:+49422619 None:intergenic
AGCGGTTGCAAGAGGAGATT+CGG 0.443420 5_3:-49423652 Msa0815750:CDS
ATATAATGATTACCTCTAGA+AGG 0.448474 5_3:+49424462 None:intergenic
GTCTATTAGAGGTAAGCAAT+TGG 0.450472 5_3:-49424264 Msa0815750:CDS
TCAGACATCACATTCCATAT+TGG 0.453192 5_3:-49424239 Msa0815750:CDS
CATCATAAAAGTATATATCT+AGG 0.453405 5_3:+49424504 None:intergenic
TCCAGTATAAAGAGATTCTC+TGG 0.454674 5_3:+49429187 None:intergenic
CTTTGATCCCTTGACTATCA+AGG 0.455450 5_3:+49426632 None:intergenic
CTTCTTTACTTGTTAGAGAA+GGG 0.459052 5_3:-49423716 Msa0815750:CDS
AATAAAACTAACCTGTTATG+AGG 0.460875 5_3:+49436455 None:intergenic
CACGTGAATTGATGATATAA+GGG 0.460926 5_3:+49436900 None:intergenic
TATATCTAGGATATTTGAAA+AGG 0.461969 5_3:+49424517 None:intergenic
GTTATGGTTATAATGTGTAT+AGG 0.462986 5_3:+49436794 None:intergenic
GTTCTTGGTGCTTACTTGAT+CGG 0.463629 5_3:-49426666 Msa0815750:CDS
CTAGATTACAGCACATTACA+AGG 0.463779 5_3:+49422364 None:intergenic
GATATCCGTGAACAAATAAA+GGG 0.468529 5_3:-49426543 Msa0815750:CDS
GAATAGAAATAAACTTCATA+AGG 0.468958 5_3:-49426565 Msa0815750:CDS
CAAGAAGGAGATGAAGGAAG+AGG 0.481698 5_3:-49436672 Msa0815750:CDS
TTCAGATGCAGCAACATGTA+GGG 0.482589 5_3:+49423563 None:intergenic
TTATGATGGAAGATCACCTT+TGG 0.485561 5_3:-49424108 Msa0815750:intron
TGCTGCATGCAGAGGATATG+AGG 0.486498 5_3:-49423931 Msa0815750:CDS
GAAATCAATGATTGACAAGA+AGG 0.487811 5_3:-49436687 Msa0815750:exon
AACCTTGTAGATGAGGTCCC+AGG 0.492365 5_3:+49428718 None:intergenic
ACACTTCTTCTTATTCATGA+AGG 0.493130 5_3:-49423903 Msa0815750:CDS
CGTGGCCCTTTATTTGTTCA+CGG 0.497113 5_3:+49426538 None:intergenic
ACCTTAGATCGAATAGAAAT+GGG 0.498449 5_3:+49426462 None:intergenic
AAAACAGCAGCAGAACAGAT+AGG 0.501512 5_3:-49422537 Msa0815750:CDS
CCAGATAGATAGATAACGGC+AGG 0.501930 5_3:+49437039 None:intergenic
GAAGTAGGCATAGCTGATGA+TGG 0.503447 5_3:-49424671 Msa0815750:CDS
GATTGACAAGAAGGAGATGA+AGG 0.504967 5_3:-49436678 Msa0815750:CDS
TATACATGCAGTAAATTTGA+GGG 0.506151 5_3:-49426727 Msa0815750:CDS
AGATGAAGGAAGAGGATGAA+AGG 0.507355 5_3:-49436664 Msa0815750:CDS
CTAACAAGTTTGATTCGAGC+TGG 0.507916 5_3:-49424152 Msa0815750:CDS
ATCATAGGAATTTAACTATG+TGG 0.510460 5_3:+49422297 None:intergenic
GCTTCTTTACTTGTTAGAGA+AGG 0.513509 5_3:-49423717 Msa0815750:CDS
TTCTTTACTTGTTAGAGAAG+GGG 0.515946 5_3:-49423715 Msa0815750:CDS
CTCATCTTTCTTCACCCCAA+TGG 0.516595 5_3:-49429233 Msa0815750:CDS
GTGTCAATTACATTATTGCT+CGG 0.517673 5_3:-49427806 Msa0815750:CDS
CAGTGTTCCCGTTCCATCCG+TGG 0.517873 5_3:-49422626 Msa0815750:CDS
GAGTTGTTCGTGAGCGAGCG+AGG 0.522568 5_3:+49436957 None:intergenic
TGAAAGAGATTATGAAGTGC+AGG 0.522619 5_3:-49436591 Msa0815750:CDS
ATATACATGCAGTAAATTTG+AGG 0.522845 5_3:-49426728 Msa0815750:CDS
GCAAAGTTGTTATTAGAAGC+CGG 0.525156 5_3:-49423525 Msa0815750:CDS
CTACTTGAAGCAGTTAAGAA+TGG 0.526075 5_3:-49423753 Msa0815750:CDS
GTATAAAGAGATTCTCTGGC+AGG 0.526369 5_3:+49429191 None:intergenic
CTTCAGATGCAGCAACATGT+AGG 0.529295 5_3:+49423562 None:intergenic
CAAGAGGGCTACACATGGAT+AGG 0.535896 5_3:-49427696 Msa0815750:CDS
TCTTCTTGGATGTATGCCCT+GGG 0.537095 5_3:-49428735 Msa0815750:CDS
ACCATCATCTATCCTAAAAG+AGG 0.538159 5_3:+49423692 None:intergenic
TTCTTAACTGCTTCAAGTAG+CGG 0.540123 5_3:+49423756 None:intergenic
TTCGTGTTTGTGAACTGTGT+AGG 0.541275 5_3:-49424562 Msa0815750:CDS
CTACATGTTGCTGCATCTGA+AGG 0.541279 5_3:-49423561 Msa0815750:CDS
GTTTCAATGCAGGAGGAAGT+AGG 0.544137 5_3:-49424686 Msa0815750:intron
TTTGGATCCCACGGATGGAA+CGG 0.544164 5_3:+49422618 None:intergenic
TCGTGTTTGTGAACTGTGTA+GGG 0.545827 5_3:-49424561 Msa0815750:CDS
AGGATTGTTTATCAATCCGC+AGG 0.546342 5_3:+49424537 None:intergenic
TGTTGCATTATAACTTCCCC+AGG 0.548638 5_3:+49425109 None:intergenic
TCATAGGAATTTAACTATGT+GGG 0.551946 5_3:+49422298 None:intergenic
AGACTGAAAAGTTTAGGGAC+AGG 0.553258 5_3:-49426611 Msa0815750:CDS
TGATAAAATACAAGAGTCAC+CGG 0.555115 5_3:+49422509 None:intergenic
TCACAAACACGAACAGTATG+TGG 0.557670 5_3:+49424572 None:intergenic
CTCATCCGAGCTTCATCAAG+CGG 0.561492 5_3:+49422872 None:intergenic
CTTGATGAAGCTCGGATGAG+TGG 0.563533 5_3:-49422869 Msa0815750:CDS
GATTTATGTTTCATTTGACA+TGG 0.567202 5_3:-49426688 Msa0815750:CDS
ACCTTGTAGATGAGGTCCCA+GGG 0.570005 5_3:+49428719 None:intergenic
TAGAAGTGCAACAGTTTCCT+CGG 0.570596 5_3:+49424646 None:intergenic
ATGGTTATAATGTGTATAGG+AGG 0.572181 5_3:+49436797 None:intergenic
GCTGCCAGATAGATAGATAA+CGG 0.575147 5_3:+49437035 None:intergenic
GGTGTAGACATCAACGTCAA+AGG 0.575460 5_3:-49423882 Msa0815750:intron
AGTGTTCCCGTTCCATCCGT+GGG 0.575764 5_3:-49422625 Msa0815750:CDS
AGCTAAATAGTAGAATATGC+AGG 0.576332 5_3:+49427737 None:intergenic
ATACTCCGCTTGATGAAGCT+CGG 0.576832 5_3:-49422877 Msa0815750:CDS
ACAGGCTTGTGGACGGAGAG+AGG 0.578778 5_3:-49427910 Msa0815750:intron
GCCCTGGGACCTCATCTACA+AGG 0.578995 5_3:-49428720 Msa0815750:intron
ACACGAACAGTATGTGGCTG+AGG 0.585190 5_3:+49424578 None:intergenic
ATGTGTATAGGAGGAAATAA+CGG 0.587629 5_3:+49436806 None:intergenic
TTATGCTCAGCGGTTGCAAG+AGG 0.591981 5_3:-49423660 Msa0815750:CDS
CATGACAGCCTTGATAGTCA+AGG 0.595353 5_3:-49426640 Msa0815750:CDS
GAAGTAGAACCTTGTAGATG+AGG 0.595885 5_3:+49428711 None:intergenic
AAGTAGGCATAGCTGATGAT+GGG 0.598659 5_3:-49424670 Msa0815750:CDS
AATGCAGGTGGTATCGTGCA+TGG 0.599872 5_3:-49429285 Msa0815750:intron
TGAGGAATTCTTTCTTCCTG+GGG 0.600005 5_3:-49425125 Msa0815750:CDS
ATTAGCTCTTGAATGGTGTG+TGG 0.609110 5_3:+49422561 None:intergenic
TGAAAGGATTAATAATCAGA+CGG 0.609578 5_3:-49436648 Msa0815750:CDS
CAGGAAGAAAGAATTCCTCA+TGG 0.613827 5_3:+49425128 None:intergenic
ACGCTTGCAAACCATGCGAT+AGG 0.613853 5_3:+49429093 None:intergenic
ATGACAGCCTTGATAGTCAA+GGG 0.617477 5_3:-49426639 Msa0815750:CDS
CAGATGCAGCAACATGTAGG+GGG 0.623515 5_3:+49423565 None:intergenic
AATCCCAAGAGGGCTACACA+TGG 0.627575 5_3:-49427701 Msa0815750:CDS
TTTATGAACAGGCTTGTGGA+CGG 0.628660 5_3:-49427917 Msa0815750:intron
TCAGTACCTGTAATTTCTTG+GGG 0.633503 5_3:+49422782 None:intergenic
TTTCAAACTGCAAACGCACG+TGG 0.634475 5_3:+49426520 None:intergenic
GTGAACTGTGTAGGGTCCTG+CGG 0.635006 5_3:-49424553 Msa0815750:CDS
TAGAAATGGGAATATCCTGA+AGG 0.635657 5_3:+49426475 None:intergenic
TAGCATCTTGCTGCATGCAG+AGG 0.635817 5_3:-49423939 Msa0815750:CDS
TAATGAAGAGAATCACGAGA+AGG 0.635892 5_3:+49436858 None:intergenic
ATTGTTACTATGGCTACTGT+CGG 0.635977 5_3:-49427588 Msa0815750:intron
TGGATAGGAAGTTTGAAACT+CGG 0.642914 5_3:-49427681 Msa0815750:CDS
GATAAATTGAAATCATCTCG+AGG 0.643828 5_3:-49436560 Msa0815750:CDS
TCAGATGCAGCAACATGTAG+GGG 0.646383 5_3:+49423564 None:intergenic
AGTATTAGACAACCTTCTAG+AGG 0.656465 5_3:-49424474 Msa0815750:intron
TCCAAGAAGATCAATGACAA+AGG 0.659708 5_3:+49428748 None:intergenic
AGACAGTCAGACCTATCGCA+TGG 0.660632 5_3:-49429104 Msa0815750:CDS
CATAGCTGATGATGGGTCCG+AGG 0.664496 5_3:-49424663 Msa0815750:CDS
GTGGACGGAGAGAGGAAGTG+AGG 0.671596 5_3:-49427902 Msa0815750:CDS
ACACTACCTGAATCCCAAGA+GGG 0.677718 5_3:-49427711 Msa0815750:CDS
TCAGGTTACTAGGCTCCATG+AGG 0.679390 5_3:-49425143 Msa0815750:intron
TACACTACCTGAATCCCAAG+AGG 0.684427 5_3:-49427712 Msa0815750:CDS
AGATGCAGCAACATGTAGGG+GGG 0.701313 5_3:+49423566 None:intergenic
GGGGAAGTTATAATGCAACA+AGG 0.706358 5_3:-49425106 Msa0815750:CDS
AGCGTACTCCTATTGCTCTG+CGG 0.734479 5_3:-49429075 Msa0815750:intron
GATTACAGCACATTACAAGG+AGG 0.769661 5_3:+49422367 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAATAAATAAA+AGG + chr5_3:49424185-49424204 None:intergenic 0.0%
!!! ATTTATTTTTTTTTTTTTTT+AGG - chr5_3:49424188-49424207 Msa0815750:CDS 0.0%
!!! TTTATTTTTTTTTTTTTTTA+GGG - chr5_3:49424189-49424208 Msa0815750:CDS 0.0%
!!! AAATTTCAATATATTTTTGA+AGG + chr5_3:49422619-49422638 None:intergenic 10.0%
!!! ATATATTGAAATTTTTTCTT+AGG - chr5_3:49422625-49422644 Msa0815750:CDS 10.0%
!! AAATTTAAATAGTGTATATA+GGG - chr5_3:49423017-49423036 Msa0815750:intron 10.0%
!! AATAAATAAAAGGTTAAAAT+AGG + chr5_3:49424175-49424194 None:intergenic 10.0%
!! TATTAAAATAAAATAGTGTT+TGG - chr5_3:49424329-49424348 Msa0815750:intron 10.0%
!! TAAATATTATGTGAATTAAA+TGG - chr5_3:49424627-49424646 Msa0815750:CDS 10.0%
!!! TTATTAAATTTAAAAGTGTT+TGG + chr5_3:49425386-49425405 None:intergenic 10.0%
!!! TTATTTTGTTTAATGAATTT+GGG + chr5_3:49426338-49426357 None:intergenic 10.0%
!!! TTTATTTTGTTTAATGAATT+TGG + chr5_3:49426339-49426358 None:intergenic 10.0%
!!! TTTATTTGTTTTTACTTTAA+GGG + chr5_3:49427359-49427378 None:intergenic 10.0%
!!! ATTTATTTGTTTTTACTTTA+AGG + chr5_3:49427360-49427379 None:intergenic 10.0%
!!! AAAATTGTATTTTTCATATT+TGG - chr5_3:49428412-49428431 Msa0815750:intron 10.0%
!! TATTTATAATATCAGAAAAA+TGG + chr5_3:49428683-49428702 None:intergenic 10.0%
!!! TTTAATATTTGTATTTTGTT+TGG - chr5_3:49429475-49429494 Msa0815750:intron 10.0%
!! GTTAATAAACTAAAACAAAA+CGG + chr5_3:49422954-49422973 None:intergenic 15.0%
!! TTATTAACTATAATTAGTAG+TGG - chr5_3:49422966-49422985 Msa0815750:intron 15.0%
!! GAAATTTAAATAGTGTATAT+AGG - chr5_3:49423016-49423035 Msa0815750:intron 15.0%
!!! ATCAAATTTTTTAATGAGAT+TGG - chr5_3:49423083-49423102 Msa0815750:intron 15.0%
!! TTAGTTCAATTTAAAAAATG+AGG - chr5_3:49423161-49423180 Msa0815750:intron 15.0%
!! TCGTTGAAATAAAAAATTAT+AGG - chr5_3:49423445-49423464 Msa0815750:intron 15.0%
!!! TTTTTTTTTTTTTTTGTGTG+TGG + chr5_3:49423956-49423975 None:intergenic 15.0%
!! TAAATATAAAATGACGTAAA+AGG - chr5_3:49424376-49424395 Msa0815750:intron 15.0%
!! AAATATAAAATGACGTAAAA+GGG - chr5_3:49424377-49424396 Msa0815750:intron 15.0%
!! TAAATTAACAAGGTTAAAAT+TGG - chr5_3:49424779-49424798 Msa0815750:intron 15.0%
!! TATTATATGAATTATGAACA+AGG + chr5_3:49425093-49425112 None:intergenic 15.0%
!! TAAATATAAAATGACGTAAA+AGG + chr5_3:49424376-49424395 None:intergenic 15.0%
!! TTCTACATTACTATAATTAT+GGG + chr5_3:49425963-49425982 None:intergenic 15.0%
!! ATTCTACATTACTATAATTA+TGG + chr5_3:49425964-49425983 None:intergenic 15.0%
!!! TTATTTGTTTTTACTTTAAG+GGG + chr5_3:49427358-49427377 None:intergenic 15.0%
!!! TTTTATTTGAATTGTCAAAA+TGG - chr5_3:49427392-49427411 Msa0815750:intron 15.0%
!!! TTTTAATTAATATATGCCAT+AGG - chr5_3:49427709-49427728 Msa0815750:CDS 15.0%
!!! CTTTTTTAGTTTTAACATTT+TGG + chr5_3:49428114-49428133 None:intergenic 15.0%
!!! ATGTTTTTCTTAGAATAATT+AGG + chr5_3:49428359-49428378 None:intergenic 15.0%
!! ATTTATTTATTTATCCATTC+AGG - chr5_3:49428383-49428402 Msa0815750:intron 15.0%
!! TTTATTTATTTATCCATTCA+GGG - chr5_3:49428384-49428403 Msa0815750:intron 15.0%
!!! ATTTTCTGAAAAAATAGTAA+GGG - chr5_3:49428457-49428476 Msa0815750:intron 15.0%
!!! GTATTTTATGTTTGATATTA+CGG - chr5_3:49429804-49429823 Msa0815750:intron 15.0%
!!! GTATTTTATGTTTGATATTA+CGG - chr5_3:49429804-49429823 Msa0815750:intron 15.0%
!!! ACACAATATAATTTTTATGA+TGG - chr5_3:49430410-49430429 Msa0815750:intron 15.0%
!!! ATTGTTTTTCATTTGATTTA+TGG - chr5_3:49430530-49430549 Msa0815750:intron 15.0%
!! AGTTAAAGAAAAAGTAAAAT+GGG + chr5_3:49430852-49430871 None:intergenic 15.0%
!! AAGTTAAAGAAAAAGTAAAA+TGG + chr5_3:49430853-49430872 None:intergenic 15.0%
!! TTTAACATCTATATAAAGTT+AGG - chr5_3:49430915-49430934 Msa0815750:intron 15.0%
!!! ATTAGTATTATCTATACTTT+TGG - chr5_3:49433387-49433406 Msa0815750:intron 15.0%
!!! TAGATATATACTTTTATGAT+GGG - chr5_3:49434835-49434854 Msa0815750:intron 15.0%
!! ATATATATAGAATATGCTAT+AGG - chr5_3:49436364-49436383 Msa0815750:intron 15.0%
!!! AAAAAAAAAACGATAAGTTT+TGG + chr5_3:49436414-49436433 None:intergenic 15.0%
!! AAAATGAAAAGATAAAAAGA+AGG + chr5_3:49436594-49436613 None:intergenic 15.0%
!!! AATTTTTTAATGAGATTGGA+TGG - chr5_3:49423087-49423106 Msa0815750:intron 20.0%
!! ATATGATAAACCACTTATAA+AGG - chr5_3:49423234-49423253 Msa0815750:intron 20.0%
!!! GTAAGTTGAGTTATATTTTA+CGG + chr5_3:49423329-49423348 None:intergenic 20.0%
!! ATTCAATATAATTGTAAGTG+TGG + chr5_3:49423573-49423592 None:intergenic 20.0%
!! TAGTTTATTATGGTTTGAAA+TGG - chr5_3:49423717-49423736 Msa0815750:CDS 20.0%
!! AAAAAAATCTTACGTTAAAG+TGG - chr5_3:49423969-49423988 Msa0815750:intron 20.0%
!!! GTGGGTATTTTTTTATTATA+AGG + chr5_3:49424981-49425000 None:intergenic 20.0%
!! AAGAAGAAAAATTACTCATA+GGG + chr5_3:49425511-49425530 None:intergenic 20.0%
!!! AAAGTATCCTAATTGATTTT+GGG + chr5_3:49425624-49425643 None:intergenic 20.0%
!!! AAAAGTATCCTAATTGATTT+TGG + chr5_3:49425625-49425644 None:intergenic 20.0%
!! ATTTACATGTGATTTATTGA+CGG - chr5_3:49425701-49425720 Msa0815750:intron 20.0%
!! ATTCATAGAGAATATATTTG+AGG - chr5_3:49425760-49425779 Msa0815750:intron 20.0%
!! TTCATAGAGAATATATTTGA+GGG - chr5_3:49425761-49425780 Msa0815750:intron 20.0%
!!! ATATTATTATGTCAGTTTTG+AGG + chr5_3:49425875-49425894 None:intergenic 20.0%
!! TCTACATTACTATAATTATG+GGG + chr5_3:49425962-49425981 None:intergenic 20.0%
!!! TTTTTGTGTTTAAACCTTTT+CGG - chr5_3:49425999-49426018 Msa0815750:intron 20.0%
!! TATCATTTCTCATTTATCTT+AGG + chr5_3:49426027-49426046 None:intergenic 20.0%
!! TCAACATAATTAGTACAATT+TGG + chr5_3:49427103-49427122 None:intergenic 20.0%
!!! TATTTGTTTTTACTTTAAGG+GGG + chr5_3:49427357-49427376 None:intergenic 20.0%
!! TTATAAACTTACAAACAAAG+TGG + chr5_3:49427505-49427524 None:intergenic 20.0%
!!! TATCTACTGAACATTTTTAA+AGG - chr5_3:49428194-49428213 Msa0815750:intron 20.0%
!!! GATTTTCTGAAAAAATAGTA+AGG - chr5_3:49428456-49428475 Msa0815750:intron 20.0%
!! TACATACAATGAAATACAAT+AGG - chr5_3:49428629-49428648 Msa0815750:intron 20.0%
!! ACATACAATGAAATACAATA+GGG - chr5_3:49428630-49428649 Msa0815750:intron 20.0%
!! TAGTTAAATAAAAATGTGCA+TGG - chr5_3:49428989-49429008 Msa0815750:intron 20.0%
!! ATCAAACATAAAATACACAA+TGG + chr5_3:49429800-49429819 None:intergenic 20.0%
!! ATTTAAGTCTTCATTTATGA+GGG + chr5_3:49430011-49430030 None:intergenic 20.0%
!! AATTTAAGTCTTCATTTATG+AGG + chr5_3:49430012-49430031 None:intergenic 20.0%
!! GCTCAAATTTATATTGTTAT+GGG - chr5_3:49430074-49430093 Msa0815750:intron 20.0%
!! ATATTTGATATATGCTGAAA+TGG - chr5_3:49430487-49430506 Msa0815750:intron 20.0%
!! TATTTGATATATGCTGAAAT+GGG - chr5_3:49430488-49430507 Msa0815750:intron 20.0%
!!! TCATTTTTGAAACAATGTTT+AGG + chr5_3:49430727-49430746 None:intergenic 20.0%
!! GTTAAAGAAAAAGTAAAATG+GGG + chr5_3:49430851-49430870 None:intergenic 20.0%
!! TAAACTATATTTGTGACTAT+AGG + chr5_3:49431040-49431059 None:intergenic 20.0%
!! TATATAATCTGATCCATAAT+AGG + chr5_3:49431463-49431482 None:intergenic 20.0%
!! TATTATGGATCAGATTATAT+AGG - chr5_3:49431462-49431481 Msa0815750:intron 20.0%
!! ATTATGGATCAGATTATATA+GGG - chr5_3:49431463-49431482 Msa0815750:intron 20.0%
!!! ATAATGATTTTCATTTTGTC+TGG - chr5_3:49431816-49431835 Msa0815750:intron 20.0%
!! TAAATCATCATAATACAACT+TGG + chr5_3:49432128-49432147 None:intergenic 20.0%
!! TGATAAGATAGTATACAATT+TGG + chr5_3:49432525-49432544 None:intergenic 20.0%
!! GAATAGAAATAAACTTCATA+AGG - chr5_3:49432772-49432791 Msa0815750:intron 20.0%
!!! ATCTAAAACCTTAAAACTAA+GGG - chr5_3:49433449-49433468 Msa0815750:intron 20.0%
!!! TATTTTGTTATTTAGACTCA+AGG - chr5_3:49433510-49433529 Msa0815750:intron 20.0%
!! TGATTTAAATGTTTGTTTGT+AGG - chr5_3:49433717-49433736 Msa0815750:intron 20.0%
!!! TATATCTAGGATATTTGAAA+AGG + chr5_3:49434823-49434842 None:intergenic 20.0%
!!! CATCATAAAAGTATATATCT+AGG + chr5_3:49434836-49434855 None:intergenic 20.0%
!!! CTAGATATATACTTTTATGA+TGG - chr5_3:49434834-49434853 Msa0815750:intron 20.0%
!!! CTAATATCTCATATTTTACA+GGG - chr5_3:49435044-49435063 Msa0815750:intron 20.0%
!!! TTCAGGTGAAAATTTAAAAT+TGG - chr5_3:49435940-49435959 Msa0815750:intron 20.0%
!! ATTTCATATTTCACCTATAA+CGG + chr5_3:49436289-49436308 None:intergenic 20.0%
!! TATCTGAAAAAAATGATAGA+TGG + chr5_3:49436670-49436689 None:intergenic 20.0%
!! ATTTGATCTTGTTAATGTTA+TGG - chr5_3:49437009-49437028 Msa0815750:five_prime_UTR 20.0%
! GAAGGATTTGAAAAAATGAA+AGG + chr5_3:49422464-49422483 None:intergenic 25.0%
! GTTATGGTTATAATGTGTAT+AGG + chr5_3:49422546-49422565 None:intergenic 25.0%
! TGAAAGGATTAATAATCAGA+CGG - chr5_3:49422689-49422708 Msa0815750:intron 25.0%
! AATAAAACTAACCTGTTATG+AGG + chr5_3:49422885-49422904 None:intergenic 25.0%
! TTAACTATAATTAGTAGTGG+TGG - chr5_3:49422969-49422988 Msa0815750:intron 25.0%
! ATACATATCACCTTTATAAG+TGG + chr5_3:49423247-49423266 None:intergenic 25.0%
! TATAGTTACTTAATTAGCTG+AGG - chr5_3:49423282-49423301 Msa0815750:intron 25.0%
! ATAGTTACTTAATTAGCTGA+GGG - chr5_3:49423283-49423302 Msa0815750:intron 25.0%
!! TTTATTATGGTTTGAAATGG+CGG - chr5_3:49423720-49423739 Msa0815750:CDS 25.0%
! TTGATAGAATAAGACATGTT+TGG - chr5_3:49424057-49424076 Msa0815750:intron 25.0%
! AATAAGACATGTTTGGTAAA+AGG - chr5_3:49424064-49424083 Msa0815750:intron 25.0%
! AAAAAACACTATAAGCTAGT+GGG + chr5_3:49424095-49424114 None:intergenic 25.0%
!!! TTTTTTTTTTAGGGTGTGTT+TGG - chr5_3:49424198-49424217 Msa0815750:CDS 25.0%
!! TTTTATTATAAGGCTGTGTT+TGG + chr5_3:49424971-49424990 None:intergenic 25.0%
! AACCATGTTGTCATATATTA+TGG - chr5_3:49425025-49425044 Msa0815750:intron 25.0%
! AACCATAATATATGACAACA+TGG + chr5_3:49425030-49425049 None:intergenic 25.0%
! GAAGAAGAAAAATTACTCAT+AGG + chr5_3:49425512-49425531 None:intergenic 25.0%
!! GAGTAATTTTTCTTCTTCTT+TGG - chr5_3:49425514-49425533 Msa0815750:intron 25.0%
!!! CTTTTTTCCCAAAATCAATT+AGG - chr5_3:49425614-49425633 Msa0815750:intron 25.0%
!!! CTATAATTATGGGGTATTTT+GGG + chr5_3:49425953-49425972 None:intergenic 25.0%
!!! ACTATAATTATGGGGTATTT+TGG + chr5_3:49425954-49425973 None:intergenic 25.0%
! AGATTCTCTATTACTAGTAA+TGG + chr5_3:49426653-49426672 None:intergenic 25.0%
! AAAACAGATGTTTAAATCTG+TGG + chr5_3:49426684-49426703 None:intergenic 25.0%
!!! TGTTTTTTTGGTTTTGTTTC+CGG - chr5_3:49426992-49427011 Msa0815750:intron 25.0%
!!! TCCATGTTATCTTTTTGTTT+TGG - chr5_3:49427054-49427073 Msa0815750:intron 25.0%
! TCCAAAACAAAAAGATAACA+TGG + chr5_3:49427058-49427077 None:intergenic 25.0%
!! ATATTTGGAATCTTTGTGAT+AGG + chr5_3:49427169-49427188 None:intergenic 25.0%
! AAAAAACCAAGTTCAATCTT+TGG + chr5_3:49427419-49427438 None:intergenic 25.0%
! CAAGTGTATAAATGTCAAAA+TGG + chr5_3:49427660-49427679 None:intergenic 25.0%
!!! ATTTCATAAGATTAGTCTCT+TGG - chr5_3:49427909-49427928 Msa0815750:CDS 25.0%
! AAACAAAATATTACACACCT+TGG - chr5_3:49428011-49428030 Msa0815750:intron 25.0%
! GTTCAGTAGATAATTCTTAA+AGG + chr5_3:49428186-49428205 None:intergenic 25.0%
! TTTCTTCTATACGAGTAAAT+AGG + chr5_3:49428765-49428784 None:intergenic 25.0%
! TTACTCGTATAGAAGAAATA+TGG - chr5_3:49428767-49428786 Msa0815750:intron 25.0%
!! ATTATCTCTTTTAAGCAAAC+TGG - chr5_3:49428910-49428929 Msa0815750:intron 25.0%
!! TTATCTCTTTTAAGCAAACT+GGG - chr5_3:49428911-49428930 Msa0815750:intron 25.0%
! TCTTCATATTAATGTGACAA+GGG + chr5_3:49429031-49429050 None:intergenic 25.0%
! TTCTTCATATTAATGTGACA+AGG + chr5_3:49429032-49429051 None:intergenic 25.0%
!!! TAATATGTGTATGCTATTTC+TGG + chr5_3:49429116-49429135 None:intergenic 25.0%
! CATTGCTAGTAAAATATGAA+AGG + chr5_3:49429255-49429274 None:intergenic 25.0%
!! CTTTCATATTTTACTAGCAA+TGG - chr5_3:49429253-49429272 Msa0815750:CDS 25.0%
! TACAACAAACACAACTTTAA+TGG + chr5_3:49429577-49429596 None:intergenic 25.0%
!!! TTTTGGGTTAAAATTTGCAT+TGG - chr5_3:49429654-49429673 Msa0815750:intron 25.0%
! AGACATTTATCAATACTTGA+GGG + chr5_3:49429859-49429878 None:intergenic 25.0%
! AAGACATTTATCAATACTTG+AGG + chr5_3:49429860-49429879 None:intergenic 25.0%
! AGACATTTATCAATACTTGA+GGG + chr5_3:49429859-49429878 None:intergenic 25.0%
! AAGACATTTATCAATACTTG+AGG + chr5_3:49429860-49429879 None:intergenic 25.0%
! ATGATATTAATGAACAATGC+AGG - chr5_3:49430037-49430056 Msa0815750:intron 25.0%
! GGCTCAAATTTATATTGTTA+TGG - chr5_3:49430073-49430092 Msa0815750:intron 25.0%
! TATCAGCTATACAACAATAA+CGG + chr5_3:49430470-49430489 None:intergenic 25.0%
!! GAAATGTATTCTGGAAATTT+AGG + chr5_3:49430663-49430682 None:intergenic 25.0%
! AGGATCATAGTAAATTATAG+AGG + chr5_3:49430707-49430726 None:intergenic 25.0%
! ATGTCAACTATTAGAATTAG+AGG - chr5_3:49430816-49430835 Msa0815750:intron 25.0%
!!! ACTTTTTCTTTAACTTTCCA+TGG - chr5_3:49430857-49430876 Msa0815750:intron 25.0%
!! AAATTCTGCCTTTTAATAAC+AGG + chr5_3:49431202-49431221 None:intergenic 25.0%
! AGTTCAGAGAAATTGATATT+TGG - chr5_3:49431696-49431715 Msa0815750:intron 25.0%
!!! GTATTTTGCTATTGTTACTA+TGG - chr5_3:49431739-49431758 Msa0815750:intron 25.0%
! GCTTTCAGTATTTAAATAGA+TGG - chr5_3:49431880-49431899 Msa0815750:intron 25.0%
! ACTAGCATAGATAAAATTAG+AGG - chr5_3:49431905-49431924 Msa0815750:intron 25.0%
! CTAGCATAGATAAAATTAGA+GGG - chr5_3:49431906-49431925 Msa0815750:intron 25.0%
! TAGCATAGATAAAATTAGAG+GGG - chr5_3:49431907-49431926 Msa0815750:intron 25.0%
! ATATGTCTAAGTTCTACAAT+TGG + chr5_3:49431950-49431969 None:intergenic 25.0%
! TAGACATATCTTTAATGTGA+TGG - chr5_3:49431961-49431980 Msa0815750:intron 25.0%
! TTGAAAGAAACTCTGAATAA+AGG - chr5_3:49432022-49432041 Msa0815750:intron 25.0%
! TATAGTCTGAAGAAAATTGT+TGG - chr5_3:49432051-49432070 Msa0815750:intron 25.0%
! GTTCACTAAATCTGTTTAAA+TGG + chr5_3:49432082-49432101 None:intergenic 25.0%
! AAACAGATTTAGTGAACATT+TGG - chr5_3:49432085-49432104 Msa0815750:intron 25.0%
! ATATACATGCAGTAAATTTG+AGG - chr5_3:49432609-49432628 Msa0815750:intron 25.0%
! TATACATGCAGTAAATTTGA+GGG - chr5_3:49432610-49432629 Msa0815750:intron 25.0%
! GATTTATGTTTCATTTGACA+TGG - chr5_3:49432649-49432668 Msa0815750:intron 25.0%
! ATCAAAGACTGAAAAGTTTA+GGG - chr5_3:49432721-49432740 Msa0815750:intron 25.0%
! TTGTAGAAAGTGAAACAAAT+AGG + chr5_3:49432969-49432988 None:intergenic 25.0%
! GAAAATTCATCTTTGTTCTT+TGG - chr5_3:49433133-49433152 Msa0815750:intron 25.0%
!! TGTCATTTCATACTGATATA+TGG + chr5_3:49433368-49433387 None:intergenic 25.0%
!! AGTATTATCTATACTTTTGG+TGG - chr5_3:49433390-49433409 Msa0815750:intron 25.0%
!! GATCTAAAACCTTAAAACTA+AGG - chr5_3:49433448-49433467 Msa0815750:intron 25.0%
!! TCTAAAACCTTAAAACTAAG+GGG - chr5_3:49433450-49433469 Msa0815750:intron 25.0%
! GTAGAAAACAATAAATCCAA+TGG + chr5_3:49433608-49433627 None:intergenic 25.0%
! TTTATCCTTGAAAGAATTCA+AGG - chr5_3:49433652-49433671 Msa0815750:intron 25.0%
! TTATCCTTGAAAGAATTCAA+GGG - chr5_3:49433653-49433672 Msa0815750:intron 25.0%
! ATGCATAATTATATACTGAG+TGG + chr5_3:49433873-49433892 None:intergenic 25.0%
! TGGATTGATAAAAAAGAACT+TGG - chr5_3:49434040-49434059 Msa0815750:intron 25.0%
!! TAAAAAAGAACTTGGTAGTA+TGG - chr5_3:49434048-49434067 Msa0815750:intron 25.0%
!! AAAAAAGAACTTGGTAGTAT+GGG - chr5_3:49434049-49434068 Msa0815750:intron 25.0%
! TTTATGTTCTTTCATCTTTC+AGG - chr5_3:49434176-49434195 Msa0815750:intron 25.0%
! ATATCAGAAACCTGAAATAT+GGG + chr5_3:49434353-49434372 None:intergenic 25.0%
! AATATCAGAAACCTGAAATA+TGG + chr5_3:49434354-49434373 None:intergenic 25.0%
! AAAGAAAATTCAGCATTATC+CGG + chr5_3:49434445-49434464 None:intergenic 25.0%
!! TTCTCATAAACACTTTTACA+AGG + chr5_3:49434479-49434498 None:intergenic 25.0%
! TTCTTCATAATATCTTCCAT+AGG - chr5_3:49434525-49434544 Msa0815750:intron 25.0%
! ATATAATGATTACCTCTAGA+AGG + chr5_3:49434878-49434897 None:intergenic 25.0%
! ATGGTAGATACTCTATTAAA+GGG + chr5_3:49434919-49434938 None:intergenic 25.0%
!! ATGTACTAAGTTACTCATTT+TGG - chr5_3:49434984-49435003 Msa0815750:intron 25.0%
! CCTGTAAAATATGAGATATT+AGG + chr5_3:49435046-49435065 None:intergenic 25.0%
!! CCTAATATCTCATATTTTAC+AGG - chr5_3:49435043-49435062 Msa0815750:intron 25.0%
!! TTTATAACAGCATTTGTTAG+TGG + chr5_3:49435342-49435361 None:intergenic 25.0%
! AAACAACAAAGGTTCTTATT+AGG + chr5_3:49435372-49435391 None:intergenic 25.0%
!! GAGGATCAAACTTAAATTTT+AGG - chr5_3:49435507-49435526 Msa0815750:intron 25.0%
! GTAATTTCACAGATAACTTT+GGG - chr5_3:49435552-49435571 Msa0815750:intron 25.0%
!! CTTAAAAGGCTTTTATCTTA+TGG - chr5_3:49435713-49435732 Msa0815750:intron 25.0%
! ATTACTAATGTTTCCAAGAA+GGG - chr5_3:49435898-49435917 Msa0815750:intron 25.0%
! GTTATAGGTGAAATATGAAA+TGG - chr5_3:49436288-49436307 Msa0815750:intron 25.0%
! TAAAAATCTGATAAAGCTAC+TGG - chr5_3:49436494-49436513 Msa0815750:CDS 25.0%
! GAAGAAATGGAATAGTATTA+TGG - chr5_3:49436750-49436769 Msa0815750:five_prime_UTR 25.0%
! TTTAGTCAATGAAATGCATT+AGG - chr5_3:49436907-49436926 Msa0815750:five_prime_UTR 25.0%
CAGAAAAACAAAACTGTAGT+TGG + chr5_3:49422347-49422366 None:intergenic 30.0%
! CACGTGAATTGATGATATAA+GGG + chr5_3:49422440-49422459 None:intergenic 30.0%
! TCACGTGAATTGATGATATA+AGG + chr5_3:49422441-49422460 None:intergenic 30.0%
!!! GTTTTGGAGAGAAATGAAAA+AGG + chr5_3:49422512-49422531 None:intergenic 30.0%
ATGTGTATAGGAGGAAATAA+CGG + chr5_3:49422534-49422553 None:intergenic 30.0%
ATGGTTATAATGTGTATAGG+AGG + chr5_3:49422543-49422562 None:intergenic 30.0%
TCTACGATAACAGCTAATTA+AGG + chr5_3:49422573-49422592 None:intergenic 30.0%
GAAATCAATGATTGACAAGA+AGG - chr5_3:49422650-49422669 Msa0815750:CDS 30.0%
GATAAATTGAAATCATCTCG+AGG - chr5_3:49422777-49422796 Msa0815750:intron 30.0%
AATCTGATTGAGAAAGAGTT+AGG - chr5_3:49422810-49422829 Msa0815750:CDS 30.0%
TCGTTATAAATCCTCATAAC+AGG - chr5_3:49422871-49422890 Msa0815750:CDS 30.0%
TGTGTTTCAGACTATAACTT+AGG + chr5_3:49423389-49423408 None:intergenic 30.0%
ACATCAACACTCTTTATTGA+AGG - chr5_3:49423483-49423502 Msa0815750:intron 30.0%
!!! TGGTTAGTATTGGTGTATTT+TGG - chr5_3:49423683-49423702 Msa0815750:CDS 30.0%
!!! TAGTATTGGTGTATTTTGGT+TGG - chr5_3:49423687-49423706 Msa0815750:CDS 30.0%
!!! AGTATTGGTGTATTTTGGTT+GGG - chr5_3:49423688-49423707 Msa0815750:CDS 30.0%
!!! TTTTTTTGTGTGTGGTTTTG+TGG + chr5_3:49423948-49423967 None:intergenic 30.0%
CAAAAAACACTATAAGCTAG+TGG + chr5_3:49424096-49424115 None:intergenic 30.0%
! AAAAACTAGCTTATAGCTGA+TGG - chr5_3:49424271-49424290 Msa0815750:CDS 30.0%
AGATCAAAATGTGATGTGTT+TGG + chr5_3:49424897-49424916 None:intergenic 30.0%
AAAAAATACCCACATTCTTG+TGG - chr5_3:49424988-49425007 Msa0815750:intron 30.0%
GTGTAGAAAATCTTATGCAT+AGG - chr5_3:49425723-49425742 Msa0815750:intron 30.0%
ATTTATCTTAGGAACCGAAA+AGG + chr5_3:49426016-49426035 None:intergenic 30.0%
AAATGTCAAAATTGTTAGGC+CGG + chr5_3:49426202-49426221 None:intergenic 30.0%
GGCAAAATGTCAAAATTGTT+AGG + chr5_3:49426206-49426225 None:intergenic 30.0%
ATAAGACAACCTTACTTAGA+AGG - chr5_3:49426384-49426403 Msa0815750:intron 30.0%
! GAAGGTAACGTATCTAAAAT+TGG - chr5_3:49426402-49426421 Msa0815750:intron 30.0%
GAAGTAGTTAGGAATATGTT+GGG + chr5_3:49426433-49426452 None:intergenic 30.0%
TGAAGTAGTTAGGAATATGT+TGG + chr5_3:49426434-49426453 None:intergenic 30.0%
AACCATGAAATTCATTTCCT+TGG - chr5_3:49426561-49426580 Msa0815750:CDS 30.0%
TAATTGTATTGAGATGTCCA+AGG + chr5_3:49426581-49426600 None:intergenic 30.0%
! ATTTGAAGCTGAAATTCATG+GGG + chr5_3:49426734-49426753 None:intergenic 30.0%
! CATTTGAAGCTGAAATTCAT+GGG + chr5_3:49426735-49426754 None:intergenic 30.0%
! TAGGAACTCTTTTGGATTTA+CGG + chr5_3:49426794-49426813 None:intergenic 30.0%
CAAATTACTTCCTTAACCAT+GGG - chr5_3:49426901-49426920 Msa0815750:intron 30.0%
!!! TGTTAATTTTTAGAGCCTTG+AGG - chr5_3:49426940-49426959 Msa0815750:intron 30.0%
CAAAAAGATAACATGGAAAG+TGG + chr5_3:49427051-49427070 None:intergenic 30.0%
TGAATTGCATAGCAGATATT+TGG + chr5_3:49427184-49427203 None:intergenic 30.0%
TATATTAATTGGCTGTACAG+AGG + chr5_3:49427332-49427351 None:intergenic 30.0%
TTAAGGGGGTCTATATTAAT+TGG + chr5_3:49427343-49427362 None:intergenic 30.0%
TAAACTTACAAACAAAGTGG+AGG + chr5_3:49427502-49427521 None:intergenic 30.0%
TTCTGTTCGATGTATATAGA+AGG - chr5_3:49427844-49427863 Msa0815750:CDS 30.0%
TCTGTTCGATGTATATAGAA+GGG - chr5_3:49427845-49427864 Msa0815750:CDS 30.0%
TCAGCCTAAAGATATATTGA+GGG + chr5_3:49428068-49428087 None:intergenic 30.0%
TTCAGCCTAAAGATATATTG+AGG + chr5_3:49428069-49428088 None:intergenic 30.0%
TAAAGGTCTAAGAGACATTA+AGG - chr5_3:49428211-49428230 Msa0815750:intron 30.0%
AAAGGTCTAAGAGACATTAA+GGG - chr5_3:49428212-49428231 Msa0815750:intron 30.0%
AAAATCCACCAATGACATTT+AGG - chr5_3:49428319-49428338 Msa0815750:intron 30.0%
!!! ACAATTTTTTTCTCCCTGAA+TGG + chr5_3:49428400-49428419 None:intergenic 30.0%
TATTTCACGTAGCTAATACT+AGG - chr5_3:49428811-49428830 Msa0815750:intron 30.0%
!! TTGTACCAATCCTTTTTAAG+TGG - chr5_3:49429350-49429369 Msa0815750:intron 30.0%
!! AAAAGAGGTACCACTTAAAA+AGG + chr5_3:49429363-49429382 None:intergenic 30.0%
!! TAAAGTTGTGTTTGTTGTAG+TGG - chr5_3:49429578-49429597 Msa0815750:intron 30.0%
!!! AGTATGTAGAGTTTAGCTTT+TGG - chr5_3:49429637-49429656 Msa0815750:intron 30.0%
!!! GTATGTAGAGTTTAGCTTTT+GGG - chr5_3:49429638-49429657 Msa0815750:intron 30.0%
TTCAAGGTTTAGTATGTGTT+TGG + chr5_3:49429720-49429739 None:intergenic 30.0%
ATATTAATGAACAATGCAGG+TGG - chr5_3:49430040-49430059 Msa0815750:intron 30.0%
AAAAAATCCAAACTCCATTG+GGG + chr5_3:49430121-49430140 None:intergenic 30.0%
GAAAAAATCCAAACTCCATT+GGG + chr5_3:49430122-49430141 None:intergenic 30.0%
CTCTTTATACTGGATATTGT+AGG - chr5_3:49430159-49430178 Msa0815750:intron 30.0%
TATCTCTCACCTTATAATGT+CGG - chr5_3:49430369-49430388 Msa0815750:intron 30.0%
CCTATTAAACCGACATTATA+AGG + chr5_3:49430381-49430400 None:intergenic 30.0%
!! CCTTATAATGTCGGTTTAAT+AGG - chr5_3:49430378-49430397 Msa0815750:intron 30.0%
ATACCTACAGAAAAGAAACA+AGG + chr5_3:49430559-49430578 None:intergenic 30.0%
AAATAGTTGGTCAATTGAAC+TGG + chr5_3:49430953-49430972 None:intergenic 30.0%
ACAGACTATCAACAAATAGT+TGG + chr5_3:49430966-49430985 None:intergenic 30.0%
TCTGTCACAATACTTTATGT+TGG - chr5_3:49430981-49431000 Msa0815750:intron 30.0%
CTGTCACAATACTTTATGTT+GGG - chr5_3:49430982-49431001 Msa0815750:intron 30.0%
TGTCACAATACTTTATGTTG+GGG - chr5_3:49430983-49431002 Msa0815750:intron 30.0%
! TTGGGGTGATAGAAATTTTT+GGG - chr5_3:49431000-49431019 Msa0815750:intron 30.0%
GCACAAGTTAAGATTAATGT+TGG - chr5_3:49431260-49431279 Msa0815750:intron 30.0%
!!! TGTGCAATTTTTCAGGAATT+TGG - chr5_3:49431496-49431515 Msa0815750:intron 30.0%
GTGTCAATTACATTATTGCT+CGG - chr5_3:49431531-49431550 Msa0815750:intron 30.0%
AGCTAAATAGTAGAATATGC+AGG + chr5_3:49431603-49431622 None:intergenic 30.0%
GACAGTAATTTCATAACAGA+TGG + chr5_3:49432322-49432341 None:intergenic 30.0%
GAATCGATGCAAATAATACA+TGG + chr5_3:49432482-49432501 None:intergenic 30.0%
GTATACTATCTTATCACTCT+TGG - chr5_3:49432529-49432548 Msa0815750:intron 30.0%
! TTCTTTTCTTTCACAGGATA+TGG - chr5_3:49432584-49432603 Msa0815750:intron 30.0%
GATCAAAGACTGAAAAGTTT+AGG - chr5_3:49432720-49432739 Msa0815750:intron 30.0%
GATATCCGTGAACAAATAAA+GGG - chr5_3:49432794-49432813 Msa0815750:intron 30.0%
ACCTTAGATCGAATAGAAAT+GGG + chr5_3:49432878-49432897 None:intergenic 30.0%
TACCTTAGATCGAATAGAAA+TGG + chr5_3:49432879-49432898 None:intergenic 30.0%
AAGGTAATAAGAGAAAGAAG+AGG - chr5_3:49432893-49432912 Msa0815750:intron 30.0%
ACAACCATAAATGATGCTAA+AGG + chr5_3:49432920-49432939 None:intergenic 30.0%
GAACAAATATCAACAAGCAT+TGG + chr5_3:49433014-49433033 None:intergenic 30.0%
! TTTGTTCTCAATTTGTTCAC+TGG - chr5_3:49433027-49433046 Msa0815750:intron 30.0%
ACATATAGAGATGAAACGTA+GGG + chr5_3:49433084-49433103 None:intergenic 30.0%
AACATATAGAGATGAAACGT+AGG + chr5_3:49433085-49433104 None:intergenic 30.0%
! AAAAACGTTCCTCTTTTTAG+TGG - chr5_3:49433288-49433307 Msa0815750:intron 30.0%
ATTTCATACTGATATATGGC+AGG + chr5_3:49433364-49433383 None:intergenic 30.0%
! ACATTGATCTTTTCGTCAAT+CGG - chr5_3:49433552-49433571 Msa0815750:intron 30.0%
ACAATAAATCCAATGGACAA+GGG + chr5_3:49433601-49433620 None:intergenic 30.0%
AACAATAAATCCAATGGACA+AGG + chr5_3:49433602-49433621 None:intergenic 30.0%
! CTGACTTTTTGCAAATCAAA+CGG + chr5_3:49433680-49433699 None:intergenic 30.0%
!! GTTTGATTTGCAAAAAGTCA+GGG - chr5_3:49433679-49433698 Msa0815750:intron 30.0%
TTTGTTGAGTAACAAGTGTT+TGG + chr5_3:49433785-49433804 None:intergenic 30.0%
! AGTGGTAAAGACTGTTATTT+AGG + chr5_3:49433855-49433874 None:intergenic 30.0%
TTCAACCTTGAAAGTAAAAG+TGG + chr5_3:49434017-49434036 None:intergenic 30.0%
TTACTTTCAAGGTTGAACTT+TGG - chr5_3:49434020-49434039 Msa0815750:intron 30.0%
TAGAAACTCTCGTTAAACAA+AGG + chr5_3:49434109-49434128 None:intergenic 30.0%
! CAACTATATTTTGTCTGTGA+TGG - chr5_3:49434267-49434286 Msa0815750:intron 30.0%
GAAATTGAAAAATAGCGAAG+TGG + chr5_3:49434322-49434341 None:intergenic 30.0%
! TCTATGTTTTCCCATATTTC+AGG - chr5_3:49434340-49434359 Msa0815750:intron 30.0%
! AAAAGGGTATGAATACTAGT+AGG + chr5_3:49434407-49434426 None:intergenic 30.0%
CATGGTAGATACTCTATTAA+AGG + chr5_3:49434920-49434939 None:intergenic 30.0%
! CATAATGCATTTTGAACTCA+TGG + chr5_3:49434938-49434957 None:intergenic 30.0%
! CCATCATAATCTGTCTTTTT+GGG + chr5_3:49435218-49435237 None:intergenic 30.0%
! TCCATCATAATCTGTCTTTT+TGG + chr5_3:49435219-49435238 None:intergenic 30.0%
TGCTATACGAAAAACAACAA+AGG + chr5_3:49435383-49435402 None:intergenic 30.0%
ACACTTCTTCTTATTCATGA+AGG - chr5_3:49435434-49435453 Msa0815750:intron 30.0%
! AAATTTAAGTTTGATCCTCG+AGG + chr5_3:49435506-49435525 None:intergenic 30.0%
CGTAATTTCACAGATAACTT+TGG - chr5_3:49435551-49435570 Msa0815750:intron 30.0%
! CTTCTTTACTTGTTAGAGAA+GGG - chr5_3:49435621-49435640 Msa0815750:intron 30.0%
! TTCTTTACTTGTTAGAGAAG+GGG - chr5_3:49435622-49435641 Msa0815750:intron 30.0%
GAGATTCGGATTATCTTAAA+AGG - chr5_3:49435699-49435718 Msa0815750:intron 30.0%
! AAGGCTTTTATCTTATGGAA+TGG - chr5_3:49435718-49435737 Msa0815750:intron 30.0%
ATCTGAAGGATTAATCTTCA+TGG - chr5_3:49435790-49435809 Msa0815750:intron 30.0%
CATTACTAATGTTTCCAAGA+AGG - chr5_3:49435897-49435916 Msa0815750:intron 30.0%
TTACTAATGTTTCCAAGAAG+GGG - chr5_3:49435899-49435918 Msa0815750:intron 30.0%
!! ACCTTTTCATACTTGTTTTC+AGG - chr5_3:49435923-49435942 Msa0815750:intron 30.0%
ACCTGAAAACAAGTATGAAA+AGG + chr5_3:49435927-49435946 None:intergenic 30.0%
GTTGTCATCGTAAGATTTAT+AGG + chr5_3:49436068-49436087 None:intergenic 30.0%
!! CTTGATTTGCTATCATATAC+TGG - chr5_3:49436159-49436178 Msa0815750:intron 30.0%
!!! CGATAAGTTTTGGAATGAAA+AGG + chr5_3:49436404-49436423 None:intergenic 30.0%
ATCAGTACCTGTAATTTCTT+GGG + chr5_3:49436559-49436578 None:intergenic 30.0%
TATCAGTACCTGTAATTTCT+TGG + chr5_3:49436560-49436579 None:intergenic 30.0%
! CCATTTCTTCTTTGTTCTTT+TGG + chr5_3:49436740-49436759 None:intergenic 30.0%
CCAAAAGAACAAAGAAGAAA+TGG - chr5_3:49436737-49436756 Msa0815750:five_prime_UTR 30.0%
!!! TGTTTTGATTAGCTCTTGAA+TGG + chr5_3:49436786-49436805 None:intergenic 30.0%
TGATAAAATACAAGAGTCAC+CGG + chr5_3:49436831-49436850 None:intergenic 30.0%
! TGTATTTTATCAGAAGATGC+TGG - chr5_3:49436839-49436858 Msa0815750:five_prime_UTR 30.0%
TATTGACGTTAGCATGATTA+AGG - chr5_3:49436868-49436887 Msa0815750:five_prime_UTR 30.0%
TGCATTAGGCAATCATATTA+TGG - chr5_3:49436921-49436940 Msa0815750:five_prime_UTR 30.0%
CAAGGAGGCAAATTATTATA+TGG + chr5_3:49436958-49436977 None:intergenic 30.0%
TAATGAAGAGAATCACGAGA+AGG + chr5_3:49422482-49422501 None:intergenic 35.0%
! ATAGGAGGAAATAACGGTTT+TGG + chr5_3:49422528-49422547 None:intergenic 35.0%
AGCTAATTAAGGTCGTGTTA+TGG + chr5_3:49422562-49422581 None:intergenic 35.0%
GAGATCATCTTCTTCTTCTT+CGG - chr5_3:49422722-49422741 Msa0815750:intron 35.0%
TGAAAGAGATTATGAAGTGC+AGG - chr5_3:49422746-49422765 Msa0815750:intron 35.0%
TGATTGAGAAAGAGTTAGGT+TGG - chr5_3:49422814-49422833 Msa0815750:CDS 35.0%
! CAATCAACTCAGCATTTTAG+TGG + chr5_3:49423116-49423135 None:intergenic 35.0%
!! TCTTTATTGAAGGTGTTGCT+CGG - chr5_3:49423493-49423512 Msa0815750:intron 35.0%
TGGGTGGTAGTAGTTTATTA+TGG - chr5_3:49423707-49423726 Msa0815750:CDS 35.0%
GTAATCGTTCGTTCATTACT+TGG + chr5_3:49423922-49423941 None:intergenic 35.0%
ATATGACAACATGGTTAACG+TGG + chr5_3:49425021-49425040 None:intergenic 35.0%
! TTGAAAAGCTAGCTTATAGC+TGG + chr5_3:49425432-49425451 None:intergenic 35.0%
AATTACTCATAGGGTGTGTT+TGG + chr5_3:49425502-49425521 None:intergenic 35.0%
AGCCATTATAAACTCACAAC+CGG - chr5_3:49426153-49426172 Msa0815750:intron 35.0%
GATACGTTACCTTCTAAGTA+AGG + chr5_3:49426396-49426415 None:intergenic 35.0%
GCATTAGTGATGAAGTAGTT+AGG + chr5_3:49426444-49426463 None:intergenic 35.0%
! TAAGTTGCACTGAGTTTGTT+TGG + chr5_3:49426486-49426505 None:intergenic 35.0%
GCAGATAGTTTAGCAAGTTA+TGG + chr5_3:49426511-49426530 None:intergenic 35.0%
CATATCTTCAGAGAAGGTAA+TGG + chr5_3:49426538-49426557 None:intergenic 35.0%
GTTTCTCATATCTTCAGAGA+AGG + chr5_3:49426544-49426563 None:intergenic 35.0%
GTCCAAGGAAATGAATTTCA+TGG + chr5_3:49426566-49426585 None:intergenic 35.0%
! CATCTGTTTCTTAAAGACCA+CGG - chr5_3:49426604-49426623 Msa0815750:CDS 35.0%
CAGATGTTTAAATCTGTGGT+TGG + chr5_3:49426680-49426699 None:intergenic 35.0%
! GCATTTGAAGCTGAAATTCA+TGG + chr5_3:49426736-49426755 None:intergenic 35.0%
TGAATCAGTACCAAGATTCT+GGG - chr5_3:49426756-49426775 Msa0815750:intron 35.0%
! AACTCTTTTGGATTTACGGT+TGG + chr5_3:49426790-49426809 None:intergenic 35.0%
!! GGCATTTTTAGGAACTCTTT+TGG + chr5_3:49426802-49426821 None:intergenic 35.0%
CCATGGTTAAGGAAGTAATT+TGG + chr5_3:49426903-49426922 None:intergenic 35.0%
CCAAATTACTTCCTTAACCA+TGG - chr5_3:49426900-49426919 Msa0815750:intron 35.0%
ATCTCTCATACTTCTATGTC+CGG + chr5_3:49427014-49427033 None:intergenic 35.0%
!!! TTTTGTTTTGGAATCTCCCT+TGG - chr5_3:49427066-49427085 Msa0815750:intron 35.0%
TTTGGTATGTCAGAAACCAA+GGG + chr5_3:49427085-49427104 None:intergenic 35.0%
ATTTGGTATGTCAGAAACCA+AGG + chr5_3:49427086-49427105 None:intergenic 35.0%
! TTGATAGCAACTTTGCATTG+AGG - chr5_3:49427134-49427153 Msa0815750:intron 35.0%
TGATAGCAACTTTGCATTGA+GGG - chr5_3:49427135-49427154 Msa0815750:intron 35.0%
GGAATCTTTGTGATAGGAAT+TGG + chr5_3:49427163-49427182 None:intergenic 35.0%
! CATTTTGAACACTCCTTTTC+AGG + chr5_3:49427207-49427226 None:intergenic 35.0%
!! CTGAAAAGGAGTGTTCAAAA+TGG - chr5_3:49427205-49427224 Msa0815750:intron 35.0%
!! AAAAGGAGTGTTCAAAATGG+AGG - chr5_3:49427208-49427227 Msa0815750:intron 35.0%
TATGAACATTTGGACTTGGA+TGG + chr5_3:49427234-49427253 None:intergenic 35.0%
TTGCTATGAACATTTGGACT+TGG + chr5_3:49427238-49427257 None:intergenic 35.0%
!! GCAGATTTGCTATGAACATT+TGG + chr5_3:49427244-49427263 None:intergenic 35.0%
TGTTCATAGCAAATCTGCAT+TGG - chr5_3:49427246-49427265 Msa0815750:intron 35.0%
GTTCATAGCAAATCTGCATT+GGG - chr5_3:49427247-49427266 Msa0815750:intron 35.0%
AATGGACCAAAGATTGAACT+TGG - chr5_3:49427410-49427429 Msa0815750:intron 35.0%
!!! GTGGATGATAACTGCTTTTT+TGG - chr5_3:49428041-49428060 Msa0815750:intron 35.0%
CAGCCTAAAGATATATTGAG+GGG + chr5_3:49428067-49428086 None:intergenic 35.0%
AAGGTCTAAGAGACATTAAG+GGG - chr5_3:49428213-49428232 Msa0815750:intron 35.0%
! AAGCATTCCGTTTTCCTTTT+TGG - chr5_3:49428265-49428284 Msa0815750:intron 35.0%
! TTTTGGGCCAAAAAGGAAAA+CGG + chr5_3:49428275-49428294 None:intergenic 35.0%
!! CTATGTATTTTGGGCCAAAA+AGG + chr5_3:49428282-49428301 None:intergenic 35.0%
!! AAGAAGCACCTAAATGTCAT+TGG + chr5_3:49428330-49428349 None:intergenic 35.0%
CTCGTATAGAAGAAATATGG+TGG - chr5_3:49428770-49428789 Msa0815750:intron 35.0%
TATAGAAGAAATATGGTGGC+AGG - chr5_3:49428774-49428793 Msa0815750:intron 35.0%
AATGTCATATGGATCCATGT+TGG + chr5_3:49429158-49429177 None:intergenic 35.0%
TGAAGCTCACTAATGTCATA+TGG + chr5_3:49429169-49429188 None:intergenic 35.0%
! ATATGCTTTTATGCAACCCA+TGG + chr5_3:49429196-49429215 None:intergenic 35.0%
CACACATATGTGGTATAGTT+CGG - chr5_3:49429227-49429246 Msa0815750:CDS 35.0%
AGGTACCACTTAAAAAGGAT+TGG + chr5_3:49429358-49429377 None:intergenic 35.0%
CAACTTTAATGGTTTAACCG+AGG + chr5_3:49429566-49429585 None:intergenic 35.0%
CGAAAAAATCCAAACTCCAT+TGG + chr5_3:49430123-49430142 None:intergenic 35.0%
!!! ATGGAGTTTGGATTTTTTCG+TGG - chr5_3:49430123-49430142 Msa0815750:intron 35.0%
TCCAGTATAAAGAGATTCTC+TGG + chr5_3:49430153-49430172 None:intergenic 35.0%
! AGGACAAATAGCTTTTCTTG+TGG - chr5_3:49430179-49430198 Msa0815750:intron 35.0%
AAAATTTACCGCAGAGCAAT+AGG + chr5_3:49430273-49430292 None:intergenic 35.0%
CATAGTCTATCCAAGATCTA+TGG - chr5_3:49430436-49430455 Msa0815750:intron 35.0%
!! CTATACAACAATAACGGATG+CGG + chr5_3:49430464-49430483 None:intergenic 35.0%
!! CTTCCTTGTTTCTTTTCTGT+AGG - chr5_3:49430553-49430572 Msa0815750:intron 35.0%
ACCTTTGTCATTGATCTTCT+TGG - chr5_3:49430588-49430607 Msa0815750:intron 35.0%
TCCAAGAAGATCAATGACAA+AGG + chr5_3:49430592-49430611 None:intergenic 35.0%
CTCAAGTGAGAAATGTATTC+TGG + chr5_3:49430672-49430691 None:intergenic 35.0%
CAGAATACATTTCTCACTTG+AGG - chr5_3:49430670-49430689 Msa0815750:intron 35.0%
TCTCACTTGAGGAATTGTAT+TGG - chr5_3:49430681-49430700 Msa0815750:intron 35.0%
GTTGACATTTCATTGCAAAC+TGG + chr5_3:49430804-49430823 None:intergenic 35.0%
ACTTTCCATGGAAATTTCAC+TGG - chr5_3:49430869-49430888 Msa0815750:intron 35.0%
CTTTCCATGGAAATTTCACT+GGG - chr5_3:49430870-49430889 Msa0815750:intron 35.0%
TAATCCCAGTGAAATTTCCA+TGG + chr5_3:49430877-49430896 None:intergenic 35.0%
! GTTGGGGTGATAGAAATTTT+TGG - chr5_3:49430999-49431018 Msa0815750:intron 35.0%
ATAGTTTAACCCCATAGCAA+TGG - chr5_3:49431052-49431071 Msa0815750:intron 35.0%
TTGCGAAGCCTGTTATTAAA+AGG - chr5_3:49431191-49431210 Msa0815750:intron 35.0%
CTTAGCTAAATAAATTGCGC+AGG + chr5_3:49431241-49431260 None:intergenic 35.0%
! GTTAAGATTAATGTTGGCTG+TGG - chr5_3:49431266-49431285 Msa0815750:intron 35.0%
AAACCAGAAGTCATGACAAA+GGG + chr5_3:49431350-49431369 None:intergenic 35.0%
AAAACCAGAAGTCATGACAA+AGG + chr5_3:49431351-49431370 None:intergenic 35.0%
TGAAAGTTTCCAGTTCATTG+AGG - chr5_3:49431390-49431409 Msa0815750:intron 35.0%
AAAGGTTAACCTCAATGAAC+TGG + chr5_3:49431402-49431421 None:intergenic 35.0%
! GAGGTTAACCTTTTATGAAC+AGG - chr5_3:49431409-49431428 Msa0815750:intron 35.0%
! AGAGAGTTGTGCAATTTTTC+AGG - chr5_3:49431489-49431508 Msa0815750:intron 35.0%
! TGGATAGGAAGTTTGAAACT+CGG - chr5_3:49431656-49431675 Msa0815750:intron 35.0%
ATTGTTACTATGGCTACTGT+CGG - chr5_3:49431749-49431768 Msa0815750:intron 35.0%
TTCTTCCTCTACTCTTTGTT+TGG - chr5_3:49431992-49432011 Msa0815750:intron 35.0%
! TCTTCCTCTACTCTTTGTTT+GGG - chr5_3:49431993-49432012 Msa0815750:intron 35.0%
!! TAACAGATGGTGTTGTGATT+TGG + chr5_3:49432309-49432328 None:intergenic 35.0%
CTGTTATGAAATTACTGTCC+TGG - chr5_3:49432323-49432342 Msa0815750:intron 35.0%
TACATGGATCTACATAGAAG+CGG + chr5_3:49432466-49432485 None:intergenic 35.0%
! GCAACTTTCTTTTCTTTCAC+AGG - chr5_3:49432578-49432597 Msa0815750:intron 35.0%
GTTTCATTTGACATGGTTCT+TGG - chr5_3:49432656-49432675 Msa0815750:intron 35.0%
GGATATCCGTGAACAAATAA+AGG - chr5_3:49432793-49432812 Msa0815750:intron 35.0%
TAGAAATGGGAATATCCTGA+AGG + chr5_3:49432865-49432884 None:intergenic 35.0%
TCCCATTTCTATTCGATCTA+AGG - chr5_3:49432874-49432893 Msa0815750:intron 35.0%
AGGTCCTTTAGCATCATTTA+TGG - chr5_3:49432913-49432932 Msa0815750:intron 35.0%
GCATCATTTATGGTTGTCTA+TGG - chr5_3:49432923-49432942 Msa0815750:intron 35.0%
! CAAATTTCTGCTGGAGTTTT+AGG - chr5_3:49433159-49433178 Msa0815750:intron 35.0%
TGGAAAATGTGAACAGAAGA+TGG + chr5_3:49433185-49433204 None:intergenic 35.0%
!!! ACATTTTCCATGAAAGCATC+TGG - chr5_3:49433195-49433214 Msa0815750:intron 35.0%
! AGAGGAACGTTTTTGATGTA+TGG + chr5_3:49433282-49433301 None:intergenic 35.0%
ACTGATATATGGCAGGAAAT+GGG + chr5_3:49433357-49433376 None:intergenic 35.0%
TACTGATATATGGCAGGAAA+TGG + chr5_3:49433358-49433377 None:intergenic 35.0%
!!! TGTTGATCCCCTTAGTTTTA+AGG + chr5_3:49433460-49433479 None:intergenic 35.0%
! ATCTTTTCGTCAATCGGAAA+TGG - chr5_3:49433558-49433577 Msa0815750:intron 35.0%
!! CGTTTGATTTGCAAAAAGTC+AGG - chr5_3:49433678-49433697 Msa0815750:intron 35.0%
TTTGCAAAAAGTCAGGGTAA+TGG - chr5_3:49433685-49433704 Msa0815750:intron 35.0%
CTTGTTACTCAACAAACTGT+AGG - chr5_3:49433789-49433808 Msa0815750:intron 35.0%
ACTCAACAAACTGTAGGAAT+AGG - chr5_3:49433795-49433814 Msa0815750:intron 35.0%
AACTGTAGGAATAGGTGTAT+AGG - chr5_3:49433803-49433822 Msa0815750:intron 35.0%
!!! TACTGCCACTTTTACTTTCA+AGG - chr5_3:49434009-49434028 Msa0815750:intron 35.0%
TTATTCAGCATGCAGAAAAG+AGG + chr5_3:49434075-49434094 None:intergenic 35.0%
!! CTTTCATCTTTCAGGTTACT+AGG - chr5_3:49434184-49434203 Msa0815750:intron 35.0%
ATGAGGAATTCTTTCTTCCT+GGG - chr5_3:49434211-49434230 Msa0815750:intron 35.0%
GCATGAATCGGGTAATAAAA+GGG + chr5_3:49434423-49434442 None:intergenic 35.0%
! TTTTATTACCCGATTCATGC+CGG - chr5_3:49434423-49434442 Msa0815750:intron 35.0%
! TCCTGCATTGAAACAGTTTT+GGG + chr5_3:49434645-49434664 None:intergenic 35.0%
AGTATTAGACAACCTTCTAG+AGG - chr5_3:49434863-49434882 Msa0815750:intron 35.0%
AAATGCATTATGCTACTCTC+CGG - chr5_3:49434946-49434965 Msa0815750:intron 35.0%
GTCTATTAGAGGTAAGCAAT+TGG - chr5_3:49435073-49435092 Msa0815750:intron 35.0%
TCAGACATCACATTCCATAT+TGG - chr5_3:49435098-49435117 Msa0815750:intron 35.0%
!! CAGATTCTAGCTTTCCAATA+TGG + chr5_3:49435115-49435134 None:intergenic 35.0%
AGAATCTGATCTTGCTTTGA+AGG - chr5_3:49435127-49435146 Msa0815750:intron 35.0%
! GTCAATAGAACAGCTTTTGA+TGG - chr5_3:49435149-49435168 Msa0815750:intron 35.0%
CCCAAAAAGACAGATTATGA+TGG - chr5_3:49435215-49435234 Msa0815750:intron 35.0%
! TTATGATGGAAGATCACCTT+TGG - chr5_3:49435229-49435248 Msa0815750:intron 35.0%
ACCTATATAGATATTCCTCG+AGG - chr5_3:49435488-49435507 Msa0815750:intron 35.0%
TCCTCGAGGAATATCTATAT+AGG + chr5_3:49435492-49435511 None:intergenic 35.0%
TTCTTAACTGCTTCAAGTAG+CGG + chr5_3:49435584-49435603 None:intergenic 35.0%
CTACTTGAAGCAGTTAAGAA+TGG - chr5_3:49435584-49435603 Msa0815750:intron 35.0%
! GCTTCTTTACTTGTTAGAGA+AGG - chr5_3:49435620-49435639 Msa0815750:intron 35.0%
ACCATCATCTATCCTAAAAG+AGG + chr5_3:49435648-49435667 None:intergenic 35.0%
!!! TCTTTTAGGATAGATGATGG+TGG - chr5_3:49435647-49435666 Msa0815750:intron 35.0%
!!! TGGTAGTTTTTTATGCTCAG+CGG - chr5_3:49435667-49435686 Msa0815750:intron 35.0%
! GCAAAGTTGTTATTAGAAGC+CGG - chr5_3:49435812-49435831 Msa0815750:intron 35.0%
TTTGGTAAAAACACTAGCTC+CGG + chr5_3:49435834-49435853 None:intergenic 35.0%
!! CTAGTGTTTTTACCAAAGAC+AGG - chr5_3:49435837-49435856 Msa0815750:intron 35.0%
TCAATTACAGTACCTGTCTT+TGG + chr5_3:49435852-49435871 None:intergenic 35.0%
! ATTCTAGAAAACAGTAGCGT+CGG + chr5_3:49436040-49436059 None:intergenic 35.0%
TCCAAAACAGAACATCAACA+TGG - chr5_3:49436191-49436210 Msa0815750:intron 35.0%
! ACCATGTTGATGTTCTGTTT+TGG + chr5_3:49436195-49436214 None:intergenic 35.0%
! TTTTGTAACCAGGGGAAAAA+TGG + chr5_3:49436330-49436349 None:intergenic 35.0%
! AGCCAAGTATTTTGTAACCA+GGG + chr5_3:49436339-49436358 None:intergenic 35.0%
TTCATTTCACGCAAAACAGA+TGG - chr5_3:49436433-49436452 Msa0815750:intron 35.0%
TCATTTCACGCAAAACAGAT+GGG - chr5_3:49436434-49436453 Msa0815750:intron 35.0%
CTGTAATTTCTTGGGGAAAA+GGG + chr5_3:49436551-49436570 None:intergenic 35.0%
TCAGTACCTGTAATTTCTTG+GGG + chr5_3:49436558-49436577 None:intergenic 35.0%
CTAGATTACAGCACATTACA+AGG + chr5_3:49436976-49436995 None:intergenic 35.0%
GCTGCCAGATAGATAGATAA+CGG + chr5_3:49422305-49422324 None:intergenic 40.0%
GATTGACAAGAAGGAGATGA+AGG - chr5_3:49422659-49422678 Msa0815750:intron 40.0%
AGATGAAGGAAGAGGATGAA+AGG - chr5_3:49422673-49422692 Msa0815750:intron 40.0%
CACACAGGCAAATTTATGAG+CGG - chr5_3:49423050-49423069 Msa0815750:intron 40.0%
!! CTGAGTTGATTGATATCGAC+AGG - chr5_3:49423124-49423143 Msa0815750:intron 40.0%
ACTTAATTAGCTGAGGGTGA+TGG - chr5_3:49423289-49423308 Msa0815750:intron 40.0%
GTGTTGTATCGAATGTCTGT+CGG - chr5_3:49423633-49423652 Msa0815750:CDS 40.0%
! TGTCGGTGTTTCATAAGTGA+AGG - chr5_3:49423650-49423669 Msa0815750:CDS 40.0%
TGTTTCATAAGTGAAGGTGG+TGG - chr5_3:49423656-49423675 Msa0815750:CDS 40.0%
! TGGTGGTGTTTGGTTAGTAT+TGG - chr5_3:49423673-49423692 Msa0815750:CDS 40.0%
!!! ATTGGTGTATTTTGGTTGGG+TGG - chr5_3:49423691-49423710 Msa0815750:CDS 40.0%
! GAATGAAAGGGGTTAGTACA+TGG - chr5_3:49423750-49423769 Msa0815750:CDS 40.0%
! TGGCATGTGCTGTTAATCTT+TGG - chr5_3:49423778-49423797 Msa0815750:intron 40.0%
CGATCACATCACATGAATTG+CGG + chr5_3:49423810-49423829 None:intergenic 40.0%
TTTCCATTGCTCCTATGACT+AGG - chr5_3:49423845-49423864 Msa0815750:intron 40.0%
TTATCAGGCGTATCTTGTCT+CGG - chr5_3:49423869-49423888 Msa0815750:intron 40.0%
CTTGTCTCGGTAATGATCTT+TGG - chr5_3:49423882-49423901 Msa0815750:intron 40.0%
CACTCACAGCTAGTTATGTA+TGG + chr5_3:49424693-49424712 None:intergenic 40.0%
TAACTAGCTGTGAGTGAGAT+TGG - chr5_3:49424697-49424716 Msa0815750:intron 40.0%
TGGTTGTCGTAAGCAATTAG+TGG - chr5_3:49424717-49424736 Msa0815750:intron 40.0%
GGTTGTCGTAAGCAATTAGT+GGG - chr5_3:49424718-49424737 Msa0815750:intron 40.0%
TAAGCAATTAGTGGGAACGA+GGG - chr5_3:49424726-49424745 Msa0815750:intron 40.0%
GACAGTTACCACAAGAATGT+GGG + chr5_3:49424999-49425018 None:intergenic 40.0%
! GGATACTTTTATCGAGTCGA+CGG - chr5_3:49425635-49425654 Msa0815750:intron 40.0%
GCCATTATAAACTCACAACC+GGG - chr5_3:49426154-49426173 Msa0815750:intron 40.0%
CCATTATAAACTCACAACCG+GGG - chr5_3:49426155-49426174 Msa0815750:intron 40.0%
ACTTCATCACTAATGCAGCT+AGG - chr5_3:49426448-49426467 Msa0815750:intron 40.0%
CTTCATCACTAATGCAGCTA+GGG - chr5_3:49426449-49426468 Msa0815750:intron 40.0%
TTCATCACTAATGCAGCTAG+GGG - chr5_3:49426450-49426469 Msa0815750:intron 40.0%
! CGTGGTCTTTAAGAAACAGA+TGG + chr5_3:49426606-49426625 None:intergenic 40.0%
CTGAATCAGTACCAAGATTC+TGG - chr5_3:49426755-49426774 Msa0815750:intron 40.0%
! CAATTGGCTCAAGGTGAATA+CGG + chr5_3:49426866-49426885 None:intergenic 40.0%
!!! GTCAACAGCAGCTGTTTTTT+TGG - chr5_3:49426980-49426999 Msa0815750:intron 40.0%
GATAGCAACTTTGCATTGAG+GGG - chr5_3:49427136-49427155 Msa0815750:intron 40.0%
GCTATGCAATTCACCTGAAA+AGG - chr5_3:49427191-49427210 Msa0815750:intron 40.0%
TGCAACAACTGTTCAATGCA+TGG + chr5_3:49427296-49427315 None:intergenic 40.0%
AACGCAGGGTTTGAAAAAAG+TGG + chr5_3:49427452-49427471 None:intergenic 40.0%
AAGACTGAGACATCTTCCTA+TGG + chr5_3:49427728-49427747 None:intergenic 40.0%
! ATTAGTCTCTTGGATCCGAT+CGG - chr5_3:49427919-49427938 Msa0815750:intron 40.0%
TGGCCCCTCAATATATCTTT+AGG - chr5_3:49428061-49428080 Msa0815750:intron 40.0%
TGGCCCAAAATACATAGTAG+CGG - chr5_3:49428285-49428304 Msa0815750:intron 40.0%
!! GTGCCGCTACTATGTATTTT+GGG + chr5_3:49428291-49428310 None:intergenic 40.0%
!! TGTGCCGCTACTATGTATTT+TGG + chr5_3:49428292-49428311 None:intergenic 40.0%
!!! GTCATTGGTGGATTTTCCAA+AGG + chr5_3:49428315-49428334 None:intergenic 40.0%
AAGCACCTAAATGTCATTGG+TGG + chr5_3:49428327-49428346 None:intergenic 40.0%
TTAGTGAGCTTCAACTACCA+TGG - chr5_3:49429176-49429195 Msa0815750:CDS 40.0%
TAGTGAGCTTCAACTACCAT+GGG - chr5_3:49429177-49429196 Msa0815750:CDS 40.0%
CAATTCAGCTCACACATATG+TGG - chr5_3:49429217-49429236 Msa0815750:CDS 40.0%
TACTAGCAATGGTAAGATGC+TGG - chr5_3:49429264-49429283 Msa0815750:CDS 40.0%
ACTAGCAATGGTAAGATGCT+GGG - chr5_3:49429265-49429284 Msa0815750:CDS 40.0%
TACTGCAGCTTCTATGCAAA+CGG + chr5_3:49429621-49429640 None:intergenic 40.0%
CTGATTCTTGAGTGCAAACT+GGG - chr5_3:49429692-49429711 Msa0815750:intron 40.0%
CATCAAACTGGTGTACTCAT+TGG + chr5_3:49429743-49429762 None:intergenic 40.0%
GAGTACACCAGTTTGATGTT+CGG - chr5_3:49429745-49429764 Msa0815750:intron 40.0%
AACATGACCGAACATCAAAC+TGG + chr5_3:49429755-49429774 None:intergenic 40.0%
GTATAAAGAGATTCTCTGGC+AGG + chr5_3:49430149-49430168 None:intergenic 40.0%
GCCAGAGAATCTCTTTATAC+TGG - chr5_3:49430149-49430168 Msa0815750:intron 40.0%
TATATGCTGAAATGGGATGC+TGG - chr5_3:49430495-49430514 Msa0815750:intron 40.0%
GAAGTAGAACCTTGTAGATG+AGG + chr5_3:49430629-49430648 None:intergenic 40.0%
AACTGCTGTGAAAGAAGAAC+AGG + chr5_3:49430761-49430780 None:intergenic 40.0%
TCTTCTTTCACAGCAGTTCA+AGG - chr5_3:49430763-49430782 Msa0815750:intron 40.0%
! TTGTTGTGTTTCTGTTTCGC+TGG - chr5_3:49431094-49431113 Msa0815750:intron 40.0%
!!! TTGGCTGTGGTTTTGAAACA+TGG - chr5_3:49431279-49431298 Msa0815750:intron 40.0%
! ACCTTTTATGAACAGGCTTG+TGG - chr5_3:49431416-49431435 Msa0815750:intron 40.0%
TCCACAAGCCTGTTCATAAA+AGG + chr5_3:49431420-49431439 None:intergenic 40.0%
TTTATGAACAGGCTTGTGGA+CGG - chr5_3:49431420-49431439 Msa0815750:intron 40.0%
! AGGAAGTGAGGTACCTATTA+TGG - chr5_3:49431447-49431466 Msa0815750:intron 40.0%
GTTTCCCAAACAAAGAGTAG+AGG + chr5_3:49432000-49432019 None:intergenic 40.0%
TTATGCTTACCAAGTGGAGT+TGG + chr5_3:49432161-49432180 None:intergenic 40.0%
CAAGACTTATGCTTACCAAG+TGG + chr5_3:49432167-49432186 None:intergenic 40.0%
TTTGGTCTGTGTGAAAACAG+TGG + chr5_3:49432291-49432310 None:intergenic 40.0%
ATGAAATTACTGTCCTGGTG+TGG - chr5_3:49432328-49432347 Msa0815750:intron 40.0%
AACAGCTGTGTCATGAACTA+AGG + chr5_3:49432385-49432404 None:intergenic 40.0%
! TTTGCTGCTGCAGTTTTTCT+AGG - chr5_3:49432411-49432430 Msa0815750:intron 40.0%
! CATAGAAGCGGTTCTGATAA+CGG + chr5_3:49432454-49432473 None:intergenic 40.0%
!! GTTCTTGGTGCTTACTTGAT+CGG - chr5_3:49432671-49432690 Msa0815750:intron 40.0%
! ATGACAGCCTTGATAGTCAA+GGG - chr5_3:49432698-49432717 Msa0815750:intron 40.0%
CTTTGATCCCTTGACTATCA+AGG + chr5_3:49432708-49432727 None:intergenic 40.0%
AGACTGAAAAGTTTAGGGAC+AGG - chr5_3:49432726-49432745 Msa0815750:intron 40.0%
!! TATCAACAAGCATTGGAAGC+AGG + chr5_3:49433007-49433026 None:intergenic 40.0%
CTACAAACCAGATGCTTTCA+TGG + chr5_3:49433205-49433224 None:intergenic 40.0%
!! GAAGAGCATCCACTAAAAAG+AGG + chr5_3:49433300-49433319 None:intergenic 40.0%
CTGATATATGGCAGGAAATG+GGG + chr5_3:49433356-49433375 None:intergenic 40.0%
!! ATACTTTTGGTGGCTAAAGC+TGG - chr5_3:49433400-49433419 Msa0815750:intron 40.0%
!! GGAAGCTCTCTTTTGCTTTT+TGG - chr5_3:49433421-49433440 Msa0815750:intron 40.0%
ACACGCGCAAGAAATGATAA+CGG + chr5_3:49434138-49434157 None:intergenic 40.0%
CAGGAAGAAAGAATTCCTCA+TGG + chr5_3:49434212-49434231 None:intergenic 40.0%
CATGAGGAATTCTTTCTTCC+TGG - chr5_3:49434210-49434229 Msa0815750:intron 40.0%
TGAGGAATTCTTTCTTCCTG+GGG - chr5_3:49434212-49434231 Msa0815750:intron 40.0%
TGTTGCATTATAACTTCCCC+AGG + chr5_3:49434231-49434250 None:intergenic 40.0%
GGGGAAGTTATAATGCAACA+AGG - chr5_3:49434231-49434250 Msa0815750:intron 40.0%
AGTCATAGCTTCTGAGTAAC+TGG - chr5_3:49434374-49434393 Msa0815750:intron 40.0%
GGCATGAATCGGGTAATAAA+AGG + chr5_3:49434424-49434443 None:intergenic 40.0%
TCTTCCATAGGTCAACAAAG+AGG - chr5_3:49434537-49434556 Msa0815750:intron 40.0%
GTTTCCTCTTTGTTGACCTA+TGG + chr5_3:49434544-49434563 None:intergenic 40.0%
! CTCCTGCATTGAAACAGTTT+TGG + chr5_3:49434646-49434665 None:intergenic 40.0%
CAAAACTGTTTCAATGCAGG+AGG - chr5_3:49434644-49434663 Msa0815750:intron 40.0%
AAGTAGGCATAGCTGATGAT+GGG - chr5_3:49434667-49434686 Msa0815750:intron 40.0%
! TAGAAGTGCAACAGTTTCCT+CGG + chr5_3:49434694-49434713 None:intergenic 40.0%
TCACAAACACGAACAGTATG+TGG + chr5_3:49434768-49434787 None:intergenic 40.0%
TTCGTGTTTGTGAACTGTGT+AGG - chr5_3:49434775-49434794 Msa0815750:intron 40.0%
TCGTGTTTGTGAACTGTGTA+GGG - chr5_3:49434776-49434795 Msa0815750:intron 40.0%
AGGATTGTTTATCAATCCGC+AGG + chr5_3:49434803-49434822 None:intergenic 40.0%
CAGGGAAAAGAGTCTATTAG+AGG - chr5_3:49435062-49435081 Msa0815750:intron 40.0%
! CTAACAAGTTTGATTCGAGC+TGG - chr5_3:49435185-49435204 Msa0815750:intron 40.0%
ATGGAAGATCACCTTTGGTA+AGG - chr5_3:49435234-49435253 Msa0815750:intron 40.0%
!!! GCCTCTTTTAGGATAGATGA+TGG - chr5_3:49435644-49435663 Msa0815750:intron 40.0%
TTCAGATGCAGCAACATGTA+GGG + chr5_3:49435777-49435796 None:intergenic 40.0%
TATGAAAAGGTTCCCCTTCT+TGG + chr5_3:49435914-49435933 None:intergenic 40.0%
ACCTAGCACACTAGTGAATT+GGG + chr5_3:49435966-49435985 None:intergenic 40.0%
AACCTAGCACACTAGTGAAT+TGG + chr5_3:49435967-49435986 None:intergenic 40.0%
! TTCTAGAAAACAGTAGCGTC+GGG + chr5_3:49436039-49436058 None:intergenic 40.0%
TATAGCCAACTCCACTTAGT+GGG + chr5_3:49436107-49436126 None:intergenic 40.0%
ATATAGCCAACTCCACTTAG+TGG + chr5_3:49436108-49436127 None:intergenic 40.0%
!! CTATAACGGACAATCTTGGT+CGG + chr5_3:49436275-49436294 None:intergenic 40.0%
!! TCACCTATAACGGACAATCT+TGG + chr5_3:49436279-49436298 None:intergenic 40.0%
TCCCCTGGTTACAAAATACT+TGG - chr5_3:49436334-49436353 Msa0815750:intron 40.0%
! GCCAAGTATTTTGTAACCAG+GGG + chr5_3:49436338-49436357 None:intergenic 40.0%
! CAGCCAAGTATTTTGTAACC+AGG + chr5_3:49436340-49436359 None:intergenic 40.0%
CATTTCACGCAAAACAGATG+GGG - chr5_3:49436435-49436454 Msa0815750:intron 40.0%
CCTGTAATTTCTTGGGGAAA+AGG + chr5_3:49436552-49436571 None:intergenic 40.0%
! CCTTTTCCCCAAGAAATTAC+AGG - chr5_3:49436549-49436568 Msa0815750:CDS 40.0%
! CTTTGTTCTTTTGGATCCCA+CGG + chr5_3:49436731-49436750 None:intergenic 40.0%
! ATTAGCTCTTGAATGGTGTG+TGG + chr5_3:49436779-49436798 None:intergenic 40.0%
AAAACAGCAGCAGAACAGAT+AGG - chr5_3:49436800-49436819 Msa0815750:five_prime_UTR 40.0%
! GCAGAACAGATAGGATTTTC+CGG - chr5_3:49436809-49436828 Msa0815750:five_prime_UTR 40.0%
GATTACAGCACATTACAAGG+AGG + chr5_3:49436973-49436992 None:intergenic 40.0%
CAAGAAGGAGATGAAGGAAG+AGG - chr5_3:49422665-49422684 Msa0815750:intron 45.0%
CGCTCATAAATTTGCCTGTG+TGG + chr5_3:49423052-49423071 None:intergenic 45.0%
! AATTAGCTGAGGGTGATGGT+CGG - chr5_3:49423293-49423312 Msa0815750:intron 45.0%
CGGTGTTTCATAAGTGAAGG+TGG - chr5_3:49423653-49423672 Msa0815750:CDS 45.0%
! TAAGTGAAGGTGGTGGTGTT+TGG - chr5_3:49423663-49423682 Msa0815750:CDS 45.0%
TGGCGGCAAGTTTGAATGAA+AGG - chr5_3:49423737-49423756 Msa0815750:CDS 45.0%
GGCGGCAAGTTTGAATGAAA+GGG - chr5_3:49423738-49423757 Msa0815750:CDS 45.0%
GCGGCAAGTTTGAATGAAAG+GGG - chr5_3:49423739-49423758 Msa0815750:CDS 45.0%
AAGCCTAGTCATAGGAGCAA+TGG + chr5_3:49423851-49423870 None:intergenic 45.0%
CTCCTATGACTAGGCTTATC+AGG - chr5_3:49423854-49423873 Msa0815750:intron 45.0%
TATAGCTGATGGCTGATAGC+TGG - chr5_3:49424282-49424301 Msa0815750:intron 45.0%
GTAAGCAATTAGTGGGAACG+AGG - chr5_3:49424725-49424744 Msa0815750:intron 45.0%
GGACAGTTACCACAAGAATG+TGG + chr5_3:49425000-49425019 None:intergenic 45.0%
CCCCGGTTGTGAGTTTATAA+TGG + chr5_3:49426158-49426177 None:intergenic 45.0%
! GACATTTTGCCAGTTGAGCT+AGG - chr5_3:49426215-49426234 Msa0815750:intron 45.0%
TCATCACTAATGCAGCTAGG+GGG - chr5_3:49426451-49426470 Msa0815750:intron 45.0%
! GTTGCACTGAGTTTGTTTGG+TGG + chr5_3:49426483-49426502 None:intergenic 45.0%
GGCTTTCAAAGATGCTTGCA+TGG + chr5_3:49426632-49426651 None:intergenic 45.0%
CGTATTCACCTTGAGCCAAT+TGG - chr5_3:49426864-49426883 Msa0815750:intron 45.0%
! TCCTTAACCATGGGAGCTTT+TGG - chr5_3:49426910-49426929 Msa0815750:intron 45.0%
! CCTTAACCATGGGAGCTTTT+GGG - chr5_3:49426911-49426930 Msa0815750:intron 45.0%
! CTTAACCATGGGAGCTTTTG+GGG - chr5_3:49426912-49426931 Msa0815750:intron 45.0%
GACAGAGTTTGTGTTCCTCA+AGG + chr5_3:49426958-49426977 None:intergenic 45.0%
TTAGTCTCTTGGATCCGATC+GGG - chr5_3:49427920-49427939 Msa0815750:intron 45.0%
TGTTCAATGCATCTCCCGAT+CGG + chr5_3:49427937-49427956 None:intergenic 45.0%
TATCATCCACGAGTTCACCA+AGG + chr5_3:49428031-49428050 None:intergenic 45.0%
CGGAATGCTTCTCATTAACG+AGG + chr5_3:49428255-49428274 None:intergenic 45.0%
TCCCCACATGCAGTAAATGA+GGG - chr5_3:49429073-49429092 Msa0815750:intron 45.0%
TCCCTCATTTACTGCATGTG+GGG + chr5_3:49429077-49429096 None:intergenic 45.0%
GTCCCTCATTTACTGCATGT+GGG + chr5_3:49429078-49429097 None:intergenic 45.0%
TGTCCCTCATTTACTGCATG+TGG + chr5_3:49429079-49429098 None:intergenic 45.0%
GCAGTAAATGAGGGACATTC+TGG - chr5_3:49429082-49429101 Msa0815750:CDS 45.0%
TTGAGACACTGATGCCAACA+TGG - chr5_3:49429141-49429160 Msa0815750:CDS 45.0%
AGGTCAAACAGCAGTTGAAC+CGG + chr5_3:49429546-49429565 None:intergenic 45.0%
! GTTCAACTGCTGTTTGACCT+CGG - chr5_3:49429546-49429565 Msa0815750:intron 45.0%
CCAGTTTGCACTCAAGAATC+AGG + chr5_3:49429694-49429713 None:intergenic 45.0%
CCTGATTCTTGAGTGCAAAC+TGG - chr5_3:49429691-49429710 Msa0815750:intron 45.0%
!! CTGGTGTACTCATTGGTTCA+AGG + chr5_3:49429736-49429755 None:intergenic 45.0%
CTCATCTTTCTTCACCCCAA+TGG - chr5_3:49430104-49430123 Msa0815750:intron 45.0%
TTCTTCACCCCAATGGAGTT+TGG - chr5_3:49430111-49430130 Msa0815750:intron 45.0%
ATCTTCTTGGATGTATGCCC+TGG - chr5_3:49430601-49430620 Msa0815750:intron 45.0%
TCTTCTTGGATGTATGCCCT+GGG - chr5_3:49430602-49430621 Msa0815750:intron 45.0%
! ACACATGTGCCATTGCTATG+GGG + chr5_3:49431064-49431083 None:intergenic 45.0%
! GACACATGTGCCATTGCTAT+GGG + chr5_3:49431065-49431084 None:intergenic 45.0%
! TGACACATGTGCCATTGCTA+TGG + chr5_3:49431066-49431085 None:intergenic 45.0%
TAGCAATGGCACATGTGTCA+TGG - chr5_3:49431066-49431085 Msa0815750:intron 45.0%
AAGCCCTTTGTCATGACTTC+TGG - chr5_3:49431344-49431363 Msa0815750:intron 45.0%
TACACTACCTGAATCCCAAG+AGG - chr5_3:49431625-49431644 Msa0815750:intron 45.0%
ACACTACCTGAATCCCAAGA+GGG - chr5_3:49431626-49431645 Msa0815750:intron 45.0%
TATCCATGTGTAGCCCTCTT+GGG + chr5_3:49431642-49431661 None:intergenic 45.0%
TTACTATGGCTACTGTCGGT+AGG - chr5_3:49431753-49431772 Msa0815750:intron 45.0%
TCTTCACCCAACCTATGTAG+TGG - chr5_3:49431848-49431867 Msa0815750:intron 45.0%
CTTCACCCAACCTATGTAGT+GGG - chr5_3:49431849-49431868 Msa0815750:intron 45.0%
TCCTTGTAACCAACTCCACT+TGG - chr5_3:49432149-49432168 Msa0815750:intron 45.0%
! ACCAAGTGGAGTTGGTTACA+AGG + chr5_3:49432153-49432172 None:intergenic 45.0%
TTGATATGTCTCACCACACC+AGG + chr5_3:49432344-49432363 None:intergenic 45.0%
! CATGACAGCCTTGATAGTCA+AGG - chr5_3:49432697-49432716 Msa0815750:intron 45.0%
! CGTGGCCCTTTATTTGTTCA+CGG + chr5_3:49432802-49432821 None:intergenic 45.0%
TTTCAAACTGCAAACGCACG+TGG + chr5_3:49432820-49432839 None:intergenic 45.0%
CTTTGGCGACAAATTTCTGC+TGG - chr5_3:49433150-49433169 Msa0815750:intron 45.0%
GGGGATCAACACTTTCTAAC+TGG - chr5_3:49433469-49433488 Msa0815750:intron 45.0%
! TTTTATGCGCCCTTGTCCAT+TGG - chr5_3:49433589-49433608 Msa0815750:intron 45.0%
CGGACCCTTGAATTCTTTCA+AGG + chr5_3:49433660-49433679 None:intergenic 45.0%
TTTCTTGCGCGTGTAATGTC+AGG - chr5_3:49434144-49434163 Msa0815750:intron 45.0%
!! TTTTGTCTGTGATGGTGTGC+TGG - chr5_3:49434275-49434294 Msa0815750:intron 45.0%
AGCATTATCCGGCATGAATC+GGG + chr5_3:49434434-49434453 None:intergenic 45.0%
CAGCATTATCCGGCATGAAT+CGG + chr5_3:49434435-49434454 None:intergenic 45.0%
GCCCAAAACTGTTTCAATGC+AGG - chr5_3:49434641-49434660 Msa0815750:intron 45.0%
GTTTCAATGCAGGAGGAAGT+AGG - chr5_3:49434651-49434670 Msa0815750:intron 45.0%
GAAGTAGGCATAGCTGATGA+TGG - chr5_3:49434666-49434685 Msa0815750:intron 45.0%
CGTTTCAAGCTCCTTACCAA+AGG + chr5_3:49435248-49435267 None:intergenic 45.0%
CACATCGTAGATGAAGAGGA+TGG + chr5_3:49435302-49435321 None:intergenic 45.0%
CATCCTCTTCATCTACGATG+TGG - chr5_3:49435300-49435319 Msa0815750:intron 45.0%
TCACCACATCGTAGATGAAG+AGG + chr5_3:49435306-49435325 None:intergenic 45.0%
GGTGTAGACATCAACGTCAA+AGG - chr5_3:49435455-49435474 Msa0815750:intron 45.0%
! TTAGAGAAGGGGCCTCTTTT+AGG - chr5_3:49435633-49435652 Msa0815750:intron 45.0%
TCAGATGCAGCAACATGTAG+GGG + chr5_3:49435776-49435795 None:intergenic 45.0%
CTTCAGATGCAGCAACATGT+AGG + chr5_3:49435778-49435797 None:intergenic 45.0%
CTACATGTTGCTGCATCTGA+AGG - chr5_3:49435776-49435795 Msa0815750:intron 45.0%
CCACTTAGTGGGATAAGACT+TGG + chr5_3:49436096-49436115 None:intergenic 45.0%
! CCAAGTCTTATCCCACTAAG+TGG - chr5_3:49436093-49436112 Msa0815750:intron 45.0%
CTTATCCCACTAAGTGGAGT+TGG - chr5_3:49436099-49436118 Msa0815750:intron 45.0%
CGACCAAGATTGTCCGTTAT+AGG - chr5_3:49436273-49436292 Msa0815750:intron 45.0%
!! TTCCTTCTCCATTTTTCCCC+TGG - chr5_3:49436319-49436338 Msa0815750:intron 45.0%
AACCAGGGGAAAAATGGAGA+AGG + chr5_3:49436324-49436343 None:intergenic 45.0%
ATACTCCGCTTGATGAAGCT+CGG - chr5_3:49436460-49436479 Msa0815750:intron 45.0%
!! ATAATAAAATTAAATTAACA+AGG - chr5_3:49424769-49424788 Msa0815750:intron 5.0%
!!! TCATTATATTTATATTTTTT+TGG - chr5_3:49426111-49426130 Msa0815750:intron 5.0%
!! ATAATAATATTATTATGTTA+TGG - chr5_3:49428953-49428972 Msa0815750:intron 5.0%
!! AAAAAAATAAAAATAAAAAG+AGG + chr5_3:49429378-49429397 None:intergenic 5.0%
!! TATTATTATTTAATTATTAC+CGG - chr5_3:49429524-49429543 Msa0815750:intron 5.0%
!! TAAAATAAAAGTTATATATA+TGG + chr5_3:49433904-49433923 None:intergenic 5.0%
!! ATAATAATTATATGATTTAT+GGG + chr5_3:49436132-49436151 None:intergenic 5.0%
!! AATAATAATTATATGATTTA+TGG + chr5_3:49436133-49436152 None:intergenic 5.0%
TAGGGTGAGTTCTTCCACAC+AGG - chr5_3:49423035-49423054 Msa0815750:intron 50.0%
! ATTAGCTGAGGGTGATGGTC+GGG - chr5_3:49423294-49423313 Msa0815750:intron 50.0%
! GGGGTTAGTACATGGATACG+TGG - chr5_3:49423758-49423777 Msa0815750:CDS 50.0%
CGCCTGATAAGCCTAGTCAT+AGG + chr5_3:49423859-49423878 None:intergenic 50.0%
TTAGGCCGGATACTATGACC+GGG + chr5_3:49426188-49426207 None:intergenic 50.0%
GTTAGGCCGGATACTATGAC+CGG + chr5_3:49426189-49426208 None:intergenic 50.0%
TCCACAAGTCCTAGCTCAAC+TGG + chr5_3:49426227-49426246 None:intergenic 50.0%
AAGATGCTTGCATGGTTCCG+TGG + chr5_3:49426624-49426643 None:intergenic 50.0%
! GGTTGCTTTGCCCAGAATCT+TGG + chr5_3:49426769-49426788 None:intergenic 50.0%
! CAGCGTGTGGTGGCATTTTT+AGG + chr5_3:49426813-49426832 None:intergenic 50.0%
AATCCAGTTAGAGCAGCGTG+TGG + chr5_3:49426826-49426845 None:intergenic 50.0%
TGGCTCAAGGTGAATACGGA+TGG + chr5_3:49426862-49426881 None:intergenic 50.0%
TCACCTTGAGCCAATTGGAG+AGG - chr5_3:49426869-49426888 Msa0815750:intron 50.0%
CACCTTGAGCCAATTGGAGA+GGG - chr5_3:49426870-49426889 Msa0815750:intron 50.0%
ACCTTGAGCCAATTGGAGAG+GGG - chr5_3:49426871-49426890 Msa0815750:intron 50.0%
CCCAAAAGCTCCCATGGTTA+AGG + chr5_3:49426914-49426933 None:intergenic 50.0%
TACATCCCCAAAAGCTCCCA+TGG + chr5_3:49426920-49426939 None:intergenic 50.0%
TCAAACCCTGCGTTCTTACG+AGG - chr5_3:49427458-49427477 Msa0815750:intron 50.0%
ACCTACCTCGTAAGAACGCA+GGG + chr5_3:49427466-49427485 None:intergenic 50.0%
AACCTACCTCGTAAGAACGC+AGG + chr5_3:49427467-49427486 None:intergenic 50.0%
TACACACCTTGGTGAACTCG+TGG - chr5_3:49428022-49428041 Msa0815750:intron 50.0%
ACATAGTAGCGGCACACCTT+TGG - chr5_3:49428296-49428315 Msa0815750:intron 50.0%
AAATATGGTGGCAGGAGTCG+TGG - chr5_3:49428782-49428801 Msa0815750:intron 50.0%
TTTACTGCATGTGGGGACGT+GGG + chr5_3:49429070-49429089 None:intergenic 50.0%
ATTTACTGCATGTGGGGACG+TGG + chr5_3:49429071-49429090 None:intergenic 50.0%
GTCCCCACATGCAGTAAATG+AGG - chr5_3:49429072-49429091 Msa0815750:intron 50.0%
!! AGATGCTGGGTGCCATTGTT+TGG - chr5_3:49429278-49429297 Msa0815750:CDS 50.0%
!! GATGCTGGGTGCCATTGTTT+GGG - chr5_3:49429279-49429298 Msa0815750:CDS 50.0%
!! ATGCTGGGTGCCATTGTTTG+GGG - chr5_3:49429280-49429299 Msa0815750:CDS 50.0%
!! ACTCTGCTGTGAGCTTGTTG+TGG - chr5_3:49429320-49429339 Msa0815750:intron 50.0%
AATGCAGGTGGTATCGTGCA+TGG - chr5_3:49430052-49430071 Msa0815750:intron 50.0%
AGACAGTCAGACCTATCGCA+TGG - chr5_3:49430233-49430252 Msa0815750:intron 50.0%
ACGCTTGCAAACCATGCGAT+AGG + chr5_3:49430247-49430266 None:intergenic 50.0%
AGCGTACTCCTATTGCTCTG+CGG - chr5_3:49430262-49430281 Msa0815750:intron 50.0%
ACCTTGTAGATGAGGTCCCA+GGG + chr5_3:49430621-49430640 None:intergenic 50.0%
AACCTTGTAGATGAGGTCCC+AGG + chr5_3:49430622-49430641 None:intergenic 50.0%
AATCCCAAGAGGGCTACACA+TGG - chr5_3:49431636-49431655 Msa0815750:intron 50.0%
CTATCCATGTGTAGCCCTCT+TGG + chr5_3:49431643-49431662 None:intergenic 50.0%
CAAGAGGGCTACACATGGAT+AGG - chr5_3:49431641-49431660 Msa0815750:intron 50.0%
CCACTCCCACTACATAGGTT+GGG + chr5_3:49431857-49431876 None:intergenic 50.0%
ACCACTCCCACTACATAGGT+TGG + chr5_3:49431858-49431877 None:intergenic 50.0%
!! CAACAAGCATTGGAAGCAGG+TGG + chr5_3:49433004-49433023 None:intergenic 50.0%
TCAGGTTACTAGGCTCCATG+AGG - chr5_3:49434194-49434213 Msa0815750:intron 50.0%
CTAGAGCGCAACAGCTCATT+TGG - chr5_3:49434711-49434730 Msa0815750:intron 50.0%
ACACGAACAGTATGTGGCTG+AGG + chr5_3:49434762-49434781 None:intergenic 50.0%
TGCTACTCTCCGGTTGAACA+CGG - chr5_3:49434956-49434975 Msa0815750:intron 50.0%
ACATCCATGCCGTGTTCAAC+CGG + chr5_3:49434968-49434987 None:intergenic 50.0%
TAGCATCTTGCTGCATGCAG+AGG - chr5_3:49435398-49435417 Msa0815750:intron 50.0%
TGCTGCATGCAGAGGATATG+AGG - chr5_3:49435406-49435425 Msa0815750:intron 50.0%
TTATGCTCAGCGGTTGCAAG+AGG - chr5_3:49435677-49435696 Msa0815750:intron 50.0%
AGCGGTTGCAAGAGGAGATT+CGG - chr5_3:49435685-49435704 Msa0815750:intron 50.0%
AGATGCAGCAACATGTAGGG+GGG + chr5_3:49435774-49435793 None:intergenic 50.0%
CAGATGCAGCAACATGTAGG+GGG + chr5_3:49435775-49435794 None:intergenic 50.0%
GCCCAATTCACTAGTGTGCT+AGG - chr5_3:49435962-49435981 Msa0815750:intron 50.0%
CTCATCCGAGCTTCATCAAG+CGG + chr5_3:49436468-49436487 None:intergenic 50.0%
CTTGATGAAGCTCGGATGAG+TGG - chr5_3:49436468-49436487 Msa0815750:CDS 50.0%
GGGAACACTGTGCACTTCTT+TGG + chr5_3:49436701-49436720 None:intergenic 50.0%
TTTGGATCCCACGGATGGAA+CGG + chr5_3:49436722-49436741 None:intergenic 50.0%
! GTTCTTTTGGATCCCACGGA+TGG + chr5_3:49436727-49436746 None:intergenic 50.0%
GCAATTAGTGGGAACGAGGG+TGG - chr5_3:49424729-49424748 Msa0815750:intron 55.0%
CGAACCCCGGTCATAGTATC+CGG - chr5_3:49426180-49426199 Msa0815750:intron 55.0%
TAGGCCGGATACTATGACCG+GGG + chr5_3:49426187-49426206 None:intergenic 55.0%
GCCAGTTGAGCTAGGACTTG+TGG - chr5_3:49426223-49426242 Msa0815750:intron 55.0%
TTGAGCCAATTGGAGAGGGG+CGG - chr5_3:49426874-49426893 Msa0815750:intron 55.0%
ACCCTGCGTTCTTACGAGGT+AGG - chr5_3:49427462-49427481 Msa0815750:intron 55.0%
TTACTGCATGTGGGGACGTG+GGG + chr5_3:49429069-49429088 None:intergenic 55.0%
!! GGTGCCATTGTTTGGGGTGT+GGG - chr5_3:49429286-49429305 Msa0815750:intron 55.0%
!! GGATGCGGTGCCATAGATCT+TGG + chr5_3:49430449-49430468 None:intergenic 55.0%
GTGTAGCCCTCTTGGGATTC+AGG + chr5_3:49431635-49431654 None:intergenic 55.0%
! CCCAACCTATGTAGTGGGAG+TGG - chr5_3:49431854-49431873 Msa0815750:intron 55.0%
GCAGACCACTCCCACTACAT+AGG + chr5_3:49431862-49431881 None:intergenic 55.0%
!! CATAGCTGATGATGGGTCCG+AGG - chr5_3:49434674-49434693 Msa0815750:intron 55.0%
GTGAACTGTGTAGGGTCCTG+CGG - chr5_3:49434784-49434803 Msa0815750:intron 55.0%
AGTGTTCCCGTTCCATCCGT+GGG - chr5_3:49436712-49436731 Msa0815750:five_prime_UTR 55.0%
TTGGATCCCACGGATGGAAC+GGG + chr5_3:49436721-49436740 None:intergenic 55.0%
GAGTTGTTCGTGAGCGAGCG+AGG + chr5_3:49422383-49422402 None:intergenic 60.0%
TATGACCGGGGTTCGAACCC+CGG + chr5_3:49426175-49426194 None:intergenic 60.0%
CCAGTTAGAGCAGCGTGTGG+TGG + chr5_3:49426823-49426842 None:intergenic 60.0%
CCACCACACGCTGCTCTAAC+TGG - chr5_3:49426820-49426839 Msa0815750:intron 60.0%
! GCCCCTCTCCAATTGGCTCA+AGG + chr5_3:49426875-49426894 None:intergenic 60.0%
!! GGGTGCCATTGTTTGGGGTG+TGG - chr5_3:49429285-49429304 Msa0815750:intron 60.0%
CGCTCCCACACCCCAAACAA+TGG + chr5_3:49429293-49429312 None:intergenic 60.0%
! TGTTTGGGGTGTGGGAGCGA+TGG - chr5_3:49429294-49429313 Msa0815750:intron 60.0%
GCCCTGGGACCTCATCTACA+AGG - chr5_3:49430617-49430636 Msa0815750:intron 60.0%
ACAGGCTTGTGGACGGAGAG+AGG - chr5_3:49431427-49431446 Msa0815750:intron 60.0%
GTGGACGGAGAGAGGAAGTG+AGG - chr5_3:49431435-49431454 Msa0815750:intron 60.0%
CACTGACGCTGCAGTCCTTC+AGG - chr5_3:49432847-49432866 Msa0815750:intron 60.0%
CTCTCCGGTTGAACACGGCA+TGG - chr5_3:49434961-49434980 Msa0815750:intron 60.0%
! AAACAGTAGCGTCGGGCGTC+AGG + chr5_3:49436032-49436051 None:intergenic 60.0%
CAGTGTTCCCGTTCCATCCG+TGG - chr5_3:49436711-49436730 Msa0815750:five_prime_UTR 60.0%
CACAACCGGGGTTCGAACCC+CGG - chr5_3:49426167-49426186 Msa0815750:intron 65.0%
GGCAGCCGCCCCTCTCCAAT+TGG + chr5_3:49426882-49426901 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 49422301 49437058 49422301 ID=Msa0815750;Name=Msa0815750
chr5_3 mRNA 49422301 49437058 49422301 ID=Msa0815750-mRNA-1;Parent=Msa0815750;Name=Msa0815750-mRNA-1;_AED=0.16;_eAED=0.16;_QI=356|1|1|1|0.91|0.92|13|130|826
chr5_3 exon 49422301 49422672 49422301 ID=Msa0815750-mRNA-1:exon:14885;Parent=Msa0815750-mRNA-1
chr5_3 exon 49422789 49422907 49422789 ID=Msa0815750-mRNA-1:exon:14884;Parent=Msa0815750-mRNA-1
chr5_3 exon 49423501 49423795 49423501 ID=Msa0815750-mRNA-1:exon:14883;Parent=Msa0815750-mRNA-1
chr5_3 exon 49423883 49423958 49423883 ID=Msa0815750-mRNA-1:exon:14882;Parent=Msa0815750-mRNA-1
chr5_3 exon 49424109 49424294 49424109 ID=Msa0815750-mRNA-1:exon:14881;Parent=Msa0815750-mRNA-1
chr5_3 exon 49424475 49424696 49424475 ID=Msa0815750-mRNA-1:exon:14880;Parent=Msa0815750-mRNA-1
chr5_3 exon 49425063 49425161 49425063 ID=Msa0815750-mRNA-1:exon:14879;Parent=Msa0815750-mRNA-1
chr5_3 exon 49426021 49426101 49426021 ID=Msa0815750-mRNA-1:exon:14878;Parent=Msa0815750-mRNA-1
chr5_3 exon 49426464 49426759 49426464 ID=Msa0815750-mRNA-1:exon:14877;Parent=Msa0815750-mRNA-1
chr5_3 exon 49427589 49427928 49427589 ID=Msa0815750-mRNA-1:exon:14876;Parent=Msa0815750-mRNA-1
chr5_3 exon 49428721 49428784 49428721 ID=Msa0815750-mRNA-1:exon:14875;Parent=Msa0815750-mRNA-1
chr5_3 exon 49429076 49429300 49429076 ID=Msa0815750-mRNA-1:exon:14874;Parent=Msa0815750-mRNA-1
chr5_3 exon 49436467 49437058 49436467 ID=Msa0815750-mRNA-1:exon:14873;Parent=Msa0815750-mRNA-1
chr5_3 five_prime_UTR 49436703 49437058 49436703 ID=Msa0815750-mRNA-1:five_prime_utr;Parent=Msa0815750-mRNA-1
chr5_3 CDS 49436467 49436702 49436467 ID=Msa0815750-mRNA-1:cds;Parent=Msa0815750-mRNA-1
chr5_3 CDS 49429076 49429300 49429076 ID=Msa0815750-mRNA-1:cds;Parent=Msa0815750-mRNA-1
chr5_3 CDS 49428721 49428784 49428721 ID=Msa0815750-mRNA-1:cds;Parent=Msa0815750-mRNA-1
chr5_3 CDS 49427589 49427928 49427589 ID=Msa0815750-mRNA-1:cds;Parent=Msa0815750-mRNA-1
chr5_3 CDS 49426464 49426759 49426464 ID=Msa0815750-mRNA-1:cds;Parent=Msa0815750-mRNA-1
chr5_3 CDS 49426021 49426101 49426021 ID=Msa0815750-mRNA-1:cds;Parent=Msa0815750-mRNA-1
chr5_3 CDS 49425063 49425161 49425063 ID=Msa0815750-mRNA-1:cds;Parent=Msa0815750-mRNA-1
chr5_3 CDS 49424475 49424696 49424475 ID=Msa0815750-mRNA-1:cds;Parent=Msa0815750-mRNA-1
chr5_3 CDS 49424109 49424294 49424109 ID=Msa0815750-mRNA-1:cds;Parent=Msa0815750-mRNA-1
chr5_3 CDS 49423883 49423958 49423883 ID=Msa0815750-mRNA-1:cds;Parent=Msa0815750-mRNA-1
chr5_3 CDS 49423501 49423795 49423501 ID=Msa0815750-mRNA-1:cds;Parent=Msa0815750-mRNA-1
chr5_3 CDS 49422789 49422907 49422789 ID=Msa0815750-mRNA-1:cds;Parent=Msa0815750-mRNA-1
chr5_3 CDS 49422431 49422672 49422431 ID=Msa0815750-mRNA-1:cds;Parent=Msa0815750-mRNA-1
chr5_3 three_prime_UTR 49422301 49422430 49422301 ID=Msa0815750-mRNA-1:three_prime_utr;Parent=Msa0815750-mRNA-1
Gene Sequence

>Msa0815750

ATGATTGACAAGAAGGAGATGAAGGAAGAGGATGAAAGGATTAATAATCAGACGGCGACGTGTTCGAGATCATCTTCTTCTTCTTCGGATGAAAGAGATTATGAAGTGCAGGATCTTCGAGATAAATTGAAATCATCTCGAGGAAGCAGATTCAATCTGATTGAGAAAGAGTTAGGTTGGAGAAAGTTCAGTCGTCAAACTCTTCTTCATGAATTCGTTATAAATCCTCATAACAGGTGGTATCGTGCATGGCTCAAATTTATATTGTTATGGGCAGTATACTCATCTTTCTTCACCCCAATGGAGTTTGGATTTTTTCGTGGCCTGCCAGAGAATCTCTTTATACTGGATATTGTAGGACAAATAGCTTTTCTTGTGGACATTGTTTTGCAGTTCTTTGTTGCTTATAGAGACAGTCAGACCTATCGCATGGTTTGCAAGCGTACTCCTATTGCTCTGCGGTATCTAAAATCTACCTTTGTCATTGATCTTCTTGGATGTATGCCCTGGGACCTCATCTACAAGGCTTGTGGACGGAGAGAGGAAGTGAGGTACCTATTATGGATCAGATTATATAGGGCAGAGAGAGTTGTGCAATTTTTCAGGAATTTGGAGAAAGATATACGTGTCAATTACATTATTGCTCGGATTGTGAAACTTTTAGTTGTTGAACTCTACTGCACTCACACAGCAGCCTGCATATTCTACTATTTAGCTACTACACTACCTGAATCCCAAGAGGGCTACACATGGATAGGAAGTTTGAAACTCGGTGACTATGCTTATTCAAAGTTCAGAGAAATTGATATTTGGAAGCGCTACACGACATCGTTGTATTTTGCTATTGTTACTATGGCTACTGTCGGATATGGAGATATACATGCAGTAAATTTGAGGGAGATGATATTCATAATGATTTATGTTTCATTTGACATGGTTCTTGGTGCTTACTTGATCGGTAACATGACAGCCTTGATAGTCAAGGGATCAAAGACTGAAAAGTTTAGGGACAGGATGACAGATCTGATGAAATATATGAATAGAAATAAACTTCATAAGGATATCCGTGAACAAATAAAGGGCCACGTGCGTTTGCAGTTTGAAAGCAGCTACACTGACGCTGCAGTCCTTCAGGATATTCCCATTTCTATTCGATCTAAGATATTCGAATCATTGTATTCGCCATACATCAAAAACGTTCCTCTTTTTAGTGGATGCTCTTCAGAATTCATCAATCAGATTGTTACTAGGCTCCATGAGGAATTCTTTCTTCCTGGGGAAGTTATAATGCAACAAGGTTACGTTGTAGATCAACTATATTTTGTCTGTGATGGTGTGCTGGAGGAAGTAGGCATAGCTGATGATGGGTCCGAGGAAACTGTTGCACTTCTAGAGCGCAACAGCTCATTTGGAGAAATATCTATTCTTTGCAACATTCCTCAGCCACATACTGTTCGTGTTTGTGAACTGTGTAGGGTCCTGCGGATTGATAAACAATCCTTTTCAAATATCCTAGATATATACTTTTATGATGGGAAGAAAGTATTAGACAACCTTCTAGAGGGAAAAGAGTCTATTAGAGGTAAGCAATTGGAGTCAGACATCACATTCCATATTGGAAAGCTAGAATCTGATCTTGCTTTGAAGGTCAATAGAACAGCTTTTGATGGCGATATGTATCAGCTAACAAGTTTGATTCGAGCTGGAGCTGATCCCAAAAAGACAGATTATGATGGAAGATCACCTTTGCATCTTGCTGCATGCAGAGGATATGAGGATATCACACTTCTTCTTATTCATGAAGGTGTAGACATCAACGTCAAAGATAACTTTGGGAACACACCGCTACTTGAAGCAGTTAAGAATGGACACGATCAGATTGCTTCTTTACTTGTTAGAGAAGGGGCCTCTTTTAGGATAGATGATGGTGGTAGTTTTTTATGCTCAGCGGTTGCAAGAGGAGATTCGGATTATCTTAAAAGGCTTTTATCTTATGGAATGGATGCTAACTTGAAAGATTATGACTATCGAACCCCCCTACATGTTGCTGCATCTGAAGGATTAATCTTCATGGCAAAGTTGTTATTAGAAGCCGGAGCTAGTGTTTTTACCAAAGACAGATGGGGAAATACTCCGCTTGATGAAGCTCGGATGAGTGGAAATAAAAATCTGATAAAGCTACTGGAAGATGCAAAATCAGCTCAATTGACAGAATTCCCTTTTCCCCAAGAAATTACAGATAAAGTACATCCAAAGAAGTGCACAGTGTTCCCGTTCCATCCGTGGGATCCAAAAGAACAAAGAAGAAATGGAATAGTATTATGGATTCCACACACCATTCAAGAGCTAATCAAAACAGCAGCAGAACAGATAGGATTTTCCGGTGACTCTTGTATTTTATCAGAAGATGCTGGTAAAATTATTGACGTTAGCATGATTAAGGATGATCAGAAGCTGTATTTAGTCAATGAAATGCATTAG
Protein sequence

>Msa0815750

MIDKKEMKEEDERINNQTATCSRSSSSSSDERDYEVQDLRDKLKSSRGSRFNLIEKELGWRKFSRQTLLHEFVINPHNRWYRAWLKFILLWAVYSSFFTPMEFGFFRGLPENLFILDIVGQIAFLVDIVLQFFVAYRDSQTYRMVCKRTPIALRYLKSTFVIDLLGCMPWDLIYKACGRREEVRYLLWIRLYRAERVVQFFRNLEKDIRVNYIIARIVKLLVVELYCTHTAACIFYYLATTLPESQEGYTWIGSLKLGDYAYSKFREIDIWKRYTTSLYFAIVTMATVGYGDIHAVNLREMIFIMIYVSFDMVLGAYLIGNMTALIVKGSKTEKFRDRMTDLMKYMNRNKLHKDIREQIKGHVRLQFESSYTDAAVLQDIPISIRSKIFESLYSPYIKNVPLFSGCSSEFINQIVTRLHEEFFLPGEVIMQQGYVVDQLYFVCDGVLEEVGIADDGSEETVALLERNSSFGEISILCNIPQPHTVRVCELCRVLRIDKQSFSNILDIYFYDGKKVLDNLLEGKESIRGKQLESDITFHIGKLESDLALKVNRTAFDGDMYQLTSLIRAGADPKKTDYDGRSPLHLAACRGYEDITLLLIHEGVDINVKDNFGNTPLLEAVKNGHDQIASLLVREGASFRIDDGGSFLCSAVARGDSDYLKRLLSYGMDANLKDYDYRTPLHVAASEGLIFMAKLLLEAGASVFTKDRWGNTPLDEARMSGNKNLIKLLEDAKSAQLTEFPFPQEITDKVHPKKCTVFPFHPWDPKEQRRNGIVLWIPHTIQELIKTAAEQIGFSGDSCILSEDAGKIIDVSMIKDDQKLYLVNEMH*