Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297800 | XP_013457526.1 | 96.786 | 280 | 9 | 0 | 1 | 280 | 1 | 280 | 0.0 | 561 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297800 | sp|Q9C5W7|TOM2A_ARATH | 68.214 | 280 | 89 | 0 | 1 | 280 | 1 | 280 | 7.56e-129 | 370 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297800 | A0A072UPD9 | 96.786 | 280 | 9 | 0 | 1 | 280 | 1 | 280 | 0.0 | 561 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006880 | Msa1297800 | 0.806240 | 9.056616e-50 | -8.615850e-47 |
| Msa0007850 | Msa1297800 | 0.801238 | 9.896430e-49 | -8.615850e-47 |
| Msa0026660 | Msa1297800 | 0.800705 | 1.271558e-48 | -8.615850e-47 |
| Msa0033880 | Msa1297800 | 0.849885 | 2.425516e-60 | -8.615850e-47 |
| Msa0041690 | Msa1297800 | 0.811467 | 6.900620e-51 | -8.615850e-47 |
| Msa0055100 | Msa1297800 | 0.838580 | 2.642296e-57 | -8.615850e-47 |
| Msa0057610 | Msa1297800 | 0.805520 | 1.283247e-49 | -8.615850e-47 |
| Msa0062350 | Msa1297800 | 0.802443 | 5.597215e-49 | -8.615850e-47 |
| Msa0097950 | Msa1297800 | 0.836949 | 6.930886e-57 | -8.615850e-47 |
| Msa0100800 | Msa1297800 | 0.815929 | 7.185166e-52 | -8.615850e-47 |
| Msa0101180 | Msa1297800 | 0.832608 | 8.578200e-56 | -8.615850e-47 |
| Msa0103240 | Msa1297800 | 0.825998 | 3.451447e-54 | -8.615850e-47 |
| Msa0108870 | Msa1297800 | 0.836447 | 9.308849e-57 | -8.615850e-47 |
| Msa0113240 | Msa1297800 | 0.815381 | 9.517235e-52 | -8.615850e-47 |
| Msa0115370 | Msa1297800 | 0.809296 | 2.030112e-50 | -8.615850e-47 |
| Msa0606810 | Msa1297800 | 0.811531 | 6.681546e-51 | -8.615850e-47 |
| Msa0615680 | Msa1297800 | 0.803803 | 2.928558e-49 | -8.615850e-47 |
| Msa0628420 | Msa1297800 | 0.806665 | 7.368447e-50 | -8.615850e-47 |
| Msa0633570 | Msa1297800 | 0.813224 | 2.852470e-51 | -8.615850e-47 |
| Msa0640500 | Msa1297800 | 0.827730 | 1.331264e-54 | -8.615850e-47 |
| Msa0644030 | Msa1297800 | 0.802889 | 4.528809e-49 | -8.615850e-47 |
| Msa0654870 | Msa1297800 | 0.815981 | 6.997002e-52 | -8.615850e-47 |
| Msa0659990 | Msa1297800 | 0.800638 | 1.312056e-48 | -8.615850e-47 |
| Msa0666230 | Msa1297800 | 0.819894 | 9.138798e-53 | -8.615850e-47 |
| Msa0679100 | Msa1297800 | 0.812394 | 4.334769e-51 | -8.615850e-47 |
| Msa0818770 | Msa1297800 | 0.825689 | 4.088355e-54 | -8.615850e-47 |
| Msa0819540 | Msa1297800 | 0.802984 | 4.327174e-49 | -8.615850e-47 |
| Msa0822170 | Msa1297800 | 0.818666 | 1.740224e-52 | -8.615850e-47 |
| Msa0825270 | Msa1297800 | 0.804059 | 2.590928e-49 | -8.615850e-47 |
| Msa0121820 | Msa1297800 | 0.802610 | 5.169388e-49 | -8.615850e-47 |
| Msa0126770 | Msa1297800 | 0.822544 | 2.238448e-53 | -8.615850e-47 |
| Msa0127850 | Msa1297800 | 0.839672 | 1.377132e-57 | -8.615850e-47 |
| Msa0145150 | Msa1297800 | 0.817836 | 2.682052e-52 | -8.615850e-47 |
| Msa0147980 | Msa1297800 | 0.801613 | 8.290684e-49 | -8.615850e-47 |
| Msa0166750 | Msa1297800 | 0.843252 | 1.571070e-58 | -8.615850e-47 |
| Msa0167480 | Msa1297800 | 0.809229 | 2.098126e-50 | -8.615850e-47 |
| Msa0171850 | Msa1297800 | 0.804502 | 2.094751e-49 | -8.615850e-47 |
| Msa0174000 | Msa1297800 | 0.845240 | 4.593174e-59 | -8.615850e-47 |
| Msa0177270 | Msa1297800 | 0.801808 | 7.560195e-49 | -8.615850e-47 |
| Msa0198520 | Msa1297800 | 0.814847 | 1.250817e-51 | -8.615850e-47 |
| Msa0198530 | Msa1297800 | 0.803312 | 3.701937e-49 | -8.615850e-47 |
| Msa0221600 | Msa1297800 | 0.824282 | 8.784275e-54 | -8.615850e-47 |
| Msa0229360 | Msa1297800 | 0.801297 | 9.624160e-49 | -8.615850e-47 |
| Msa0231100 | Msa1297800 | 0.806015 | 1.010046e-49 | -8.615850e-47 |
| Msa1226610 | Msa1297800 | 0.830587 | 2.700223e-55 | -8.615850e-47 |
| Msa1227690 | Msa1297800 | 0.804828 | 1.790812e-49 | -8.615850e-47 |
| Msa1242640 | Msa1297800 | 0.834204 | 3.430966e-56 | -8.615850e-47 |
| Msa1256770 | Msa1297800 | 0.803611 | 3.209841e-49 | -8.615850e-47 |
| Msa1270620 | Msa1297800 | 0.815071 | 1.115202e-51 | -8.615850e-47 |
| Msa1270690 | Msa1297800 | 0.808949 | 2.408334e-50 | -8.615850e-47 |
| Msa1294840 | Msa1297800 | 0.800789 | 1.222123e-48 | -8.615850e-47 |
| Msa1294960 | Msa1297800 | 0.833328 | 5.682233e-56 | -8.615850e-47 |
| Msa1297800 | Msa1299700 | 0.810170 | 1.317035e-50 | -8.615850e-47 |
| Msa1297800 | Msa1306990 | 0.808160 | 3.550748e-50 | -8.615850e-47 |
| Msa1297800 | Msa1310690 | 0.810058 | 1.392359e-50 | -8.615850e-47 |
| Msa1297800 | Msa1318620 | 0.804201 | 2.420156e-49 | -8.615850e-47 |
| Msa1297800 | Msa1329450 | 0.826076 | 3.307824e-54 | -8.615850e-47 |
| Msa1297800 | Msa1329540 | 0.816128 | 6.486746e-52 | -8.615850e-47 |
| Msa1297800 | Msa1333970 | 0.827739 | 1.324631e-54 | -8.615850e-47 |
| Msa1297800 | Msa1344310 | 0.828734 | 7.625095e-55 | -8.615850e-47 |
| Msa1297800 | Msa1373820 | 0.811158 | 8.051102e-51 | -8.615850e-47 |
| Msa1297800 | Msa1411950 | 0.819434 | 1.163730e-52 | -8.615850e-47 |
| Msa1297800 | Msa1418960 | -0.808216 | 3.453387e-50 | -8.615850e-47 |
| Msa1297800 | Msa1433600 | 0.810729 | 9.973742e-51 | -8.615850e-47 |
| Msa1297800 | Msa1435770 | 0.806899 | 6.574719e-50 | -8.615850e-47 |
| Msa1297800 | Msa1438050 | 0.819789 | 9.655066e-53 | -8.615850e-47 |
| Msa1297800 | Msa1442850 | 0.809160 | 2.170139e-50 | -8.615850e-47 |
| Msa1297800 | Msa1459960 | 0.812114 | 4.988487e-51 | -8.615850e-47 |
| Msa0370160 | Msa1297800 | -0.811221 | 7.801868e-51 | -8.615850e-47 |
| Msa0384670 | Msa1297800 | 0.830598 | 2.683583e-55 | -8.615850e-47 |
| Msa0384880 | Msa1297800 | 0.832365 | 9.854689e-56 | -8.615850e-47 |
| Msa0423750 | Msa1297800 | 0.801375 | 9.276286e-49 | -8.615850e-47 |
| Msa0434570 | Msa1297800 | 0.812015 | 5.244243e-51 | -8.615850e-47 |
| Msa0434770 | Msa1297800 | 0.817658 | 2.941290e-52 | -8.615850e-47 |
| Msa0436200 | Msa1297800 | 0.806080 | 9.785025e-50 | -8.615850e-47 |
| Msa0439230 | Msa1297800 | 0.806314 | 8.735407e-50 | -8.615850e-47 |
| Msa0465960 | Msa1297800 | 0.803669 | 3.121455e-49 | -8.615850e-47 |
| Msa0474700 | Msa1297800 | 0.810214 | 1.288529e-50 | -8.615850e-47 |
| Msa0478580 | Msa1297800 | 0.827597 | 1.432895e-54 | -8.615850e-47 |
| Msa0479330 | Msa1297800 | 0.829388 | 5.294555e-55 | -8.615850e-47 |
| Msa0981430 | Msa1297800 | 0.808744 | 2.664549e-50 | -8.615850e-47 |
| Msa0994290 | Msa1297800 | 0.802068 | 6.684127e-49 | -8.615850e-47 |
| Msa0997430 | Msa1297800 | 0.811476 | 6.870257e-51 | -8.615850e-47 |
| Msa1010460 | Msa1297800 | 0.810240 | 1.271718e-50 | -8.615850e-47 |
| Msa1027250 | Msa1297800 | 0.809433 | 1.897007e-50 | -8.615850e-47 |
| Msa1027300 | Msa1297800 | 0.801992 | 6.930436e-49 | -8.615850e-47 |
| Msa1030930 | Msa1297800 | 0.820048 | 8.425833e-53 | -8.615850e-47 |
| Msa1070050 | Msa1297800 | 0.831375 | 1.729961e-55 | -8.615850e-47 |
| Msa1070390 | Msa1297800 | 0.808015 | 3.812053e-50 | -8.615850e-47 |
| Msa1071660 | Msa1297800 | 0.806517 | 7.916422e-50 | -8.615850e-47 |
| Msa1073400 | Msa1297800 | 0.810618 | 1.053951e-50 | -8.615850e-47 |
| Msa1083880 | Msa1297800 | 0.827125 | 1.859625e-54 | -8.615850e-47 |
| Msa1084500 | Msa1297800 | -0.823017 | 1.736582e-53 | -8.615850e-47 |
| Msa1093330 | Msa1297800 | 0.811539 | 6.655006e-51 | -8.615850e-47 |
| Msa0241830 | Msa1297800 | 0.807151 | 5.815367e-50 | -8.615850e-47 |
| Msa0244980 | Msa1297800 | 0.814888 | 1.225039e-51 | -8.615850e-47 |
| Msa0262480 | Msa1297800 | 0.824346 | 8.483614e-54 | -8.615850e-47 |
| Msa0291520 | Msa1297800 | 0.805787 | 1.127879e-49 | -8.615850e-47 |
| Msa0300350 | Msa1297800 | 0.801365 | 9.320466e-49 | -8.615850e-47 |
| Msa0304660 | Msa1297800 | 0.811862 | 5.660832e-51 | -8.615850e-47 |
| Msa0313930 | Msa1297800 | 0.807880 | 4.072200e-50 | -8.615850e-47 |
| Msa0322900 | Msa1297800 | 0.812801 | 3.531840e-51 | -8.615850e-47 |
| Msa0331700 | Msa1297800 | 0.814201 | 1.737954e-51 | -8.615850e-47 |
| Msa0343190 | Msa1297800 | 0.800895 | 1.162826e-48 | -8.615850e-47 |
| Msa1113880 | Msa1297800 | 0.801312 | 9.555839e-49 | -8.615850e-47 |
| Msa1114040 | Msa1297800 | 0.837393 | 5.339067e-57 | -8.615850e-47 |
| Msa1118710 | Msa1297800 | 0.800757 | 1.240707e-48 | -8.615850e-47 |
| Msa1125790 | Msa1297800 | -0.828572 | 8.346726e-55 | -8.615850e-47 |
| Msa1131560 | Msa1297800 | 0.805419 | 1.347218e-49 | -8.615850e-47 |
| Msa1145240 | Msa1297800 | 0.811041 | 8.535782e-51 | -8.615850e-47 |
| Msa1158770 | Msa1297800 | 0.819745 | 9.881588e-53 | -8.615850e-47 |
| Msa1166870 | Msa1297800 | 0.820004 | 8.621641e-53 | -8.615850e-47 |
| Msa1173900 | Msa1297800 | 0.809187 | 2.142059e-50 | -8.615850e-47 |
| Msa1179980 | Msa1297800 | 0.811398 | 7.140689e-51 | -8.615850e-47 |
| Msa1201830 | Msa1297800 | 0.813509 | 2.469466e-51 | -8.615850e-47 |
| Msa1202580 | Msa1297800 | 0.819190 | 1.322622e-52 | -8.615850e-47 |
| Msa1205850 | Msa1297800 | 0.823521 | 1.324478e-53 | -8.615850e-47 |
| Msa1206650 | Msa1297800 | 0.806730 | 7.137472e-50 | -8.615850e-47 |
| Msa1207730 | Msa1297800 | 0.839943 | 1.171014e-57 | -8.615850e-47 |
| Msa1211830 | Msa1297800 | 0.803282 | 3.755901e-49 | -8.615850e-47 |
| Msa1223330 | Msa1297800 | 0.839262 | 1.760503e-57 | -8.615850e-47 |
| Msa0505380 | Msa1297800 | 0.806358 | 8.550197e-50 | -8.615850e-47 |
| Msa0511770 | Msa1297800 | 0.811710 | 6.110814e-51 | -8.615850e-47 |
| Msa0518030 | Msa1297800 | 0.805212 | 1.488370e-49 | -8.615850e-47 |
| Msa0527910 | Msa1297800 | 0.801382 | 9.243288e-49 | -8.615850e-47 |
| Msa0531250 | Msa1297800 | 0.804379 | 2.222592e-49 | -8.615850e-47 |
| Msa0534750 | Msa1297800 | 0.810507 | 1.113696e-50 | -8.615850e-47 |
| Msa0547990 | Msa1297800 | 0.810843 | 9.420250e-51 | -8.615850e-47 |
| Msa0550570 | Msa1297800 | 0.802118 | 6.528511e-49 | -8.615850e-47 |
| Msa0561430 | Msa1297800 | 0.836133 | 1.118829e-56 | -8.615850e-47 |
| Msa0578090 | Msa1297800 | 0.801249 | 9.844072e-49 | -8.615850e-47 |
| Msa0583500 | Msa1297800 | 0.803654 | 3.143706e-49 | -8.615850e-47 |
| Msa0584550 | Msa1297800 | 0.817513 | 3.172064e-52 | -8.615850e-47 |
| Msa0586850 | Msa1297800 | 0.801708 | 7.927282e-49 | -8.615850e-47 |
| Msa0593700 | Msa1297800 | 0.820497 | 6.647948e-53 | -8.615850e-47 |
| Msa0599900 | Msa1297800 | 0.811714 | 6.098535e-51 | -8.615850e-47 |
| Msa0921870 | Msa1297800 | 0.809165 | 2.164974e-50 | -8.615850e-47 |
| Msa0960830 | Msa1297800 | 0.804707 | 1.898018e-49 | -8.615850e-47 |
| Msa0963020 | Msa1297800 | 0.832224 | 1.067814e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297800 | MtrunA17_Chr4g0054961 | 96.786 | 280 | 9 | 0 | 1 | 280 | 1 | 280 | 0.0 | 561 |
| Msa1297800 | MtrunA17_Chr5g0400291 | 78.472 | 288 | 54 | 2 | 1 | 280 | 2 | 289 | 5.92e-160 | 446 |
| Msa1297800 | MtrunA17_Chr1g0182821 | 35.918 | 245 | 141 | 5 | 10 | 252 | 13 | 243 | 4.26e-49 | 163 |
| Msa1297800 | MtrunA17_Chr4g0010471 | 33.333 | 270 | 142 | 7 | 1 | 254 | 1 | 248 | 7.78e-30 | 114 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297800 | AT1G32400.2 | 68.214 | 280 | 89 | 0 | 1 | 280 | 1 | 280 | 7.69e-130 | 370 |
| Msa1297800 | AT1G32400.1 | 68.214 | 280 | 89 | 0 | 1 | 280 | 1 | 280 | 7.69e-130 | 370 |
| Msa1297800 | AT1G32400.3 | 68.214 | 280 | 89 | 0 | 1 | 280 | 1 | 280 | 7.69e-130 | 370 |
| Msa1297800 | AT2G20230.1 | 33.333 | 267 | 151 | 5 | 3 | 251 | 6 | 263 | 2.47e-38 | 136 |
| Msa1297800 | AT2G20740.1 | 31.855 | 248 | 124 | 6 | 4 | 244 | 6 | 215 | 6.04e-38 | 133 |
| Msa1297800 | AT4G28770.1 | 39.247 | 186 | 101 | 4 | 75 | 258 | 105 | 280 | 2.10e-34 | 126 |
| Msa1297800 | AT4G28770.2 | 39.247 | 186 | 101 | 4 | 75 | 258 | 149 | 324 | 4.60e-34 | 126 |
| Msa1297800 | AT2G20740.2 | 36.022 | 186 | 97 | 5 | 66 | 244 | 4 | 174 | 3.62e-33 | 120 |
| Msa1297800 | AT2G20740.3 | 36.000 | 100 | 58 | 2 | 117 | 210 | 3 | 102 | 2.26e-15 | 71.6 |
Find 107 sgRNAs with CRISPR-Local
Find 400 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAAACATCACCATAATTT+AGG | 0.126960 | 8_3:-58344267 | Msa1297800:three_prime_UTR |
| CTCTTTGTCGTTTCTTGTTT+TGG | 0.133242 | 8_3:-58348195 | Msa1297800:CDS |
| GATACATTCGACTCATATTT+AGG | 0.135075 | 8_3:+58344176 | None:intergenic |
| ACGTACTGTTGTCAGTAATT+TGG | 0.176394 | 8_3:-58344224 | Msa1297800:three_prime_UTR |
| TTCATTTACTCCCTAAATTA+TGG | 0.203907 | 8_3:+58344256 | None:intergenic |
| CGTACTGTTGTCAGTAATTT+GGG | 0.211897 | 8_3:-58344223 | Msa1297800:three_prime_UTR |
| ACTTGGCCGGCCTATGCTTA+TGG | 0.235806 | 8_3:-58349087 | Msa1297800:CDS |
| GGTCTGGCAATGGTGGGATA+TGG | 0.250918 | 8_3:-58349194 | Msa1297800:CDS |
| TAAAATACACACCTTCATTC+TGG | 0.294418 | 8_3:-58344128 | Msa1297800:three_prime_UTR |
| TCCAACAAAGTATTCAGTTT+TGG | 0.305556 | 8_3:-58347943 | Msa1297800:intron |
| GGATGGCTTGTAGGGGTTGC+TGG | 0.307397 | 8_3:-58349259 | Msa1297800:CDS |
| TCATCTTAGCCCTTATTGTT+CGG | 0.310442 | 8_3:-58346835 | Msa1297800:CDS |
| CATCTTAGCCCTTATTGTTC+GGG | 0.313588 | 8_3:-58346834 | Msa1297800:CDS |
| GGCTGACGGGCTTGCTGCCT+TGG | 0.316943 | 8_3:+58346764 | None:intergenic |
| TTATTGTTCGGGCTGCAAAT+AGG | 0.317015 | 8_3:-58346823 | Msa1297800:CDS |
| GAAAACATCACCATAATTTA+GGG | 0.320638 | 8_3:-58344266 | Msa1297800:three_prime_UTR |
| AAACTTTAGTAAATGATTAT+CGG | 0.331388 | 8_3:-58344014 | Msa1297800:three_prime_UTR |
| ATTTACTTATTCATTGGAGT+TGG | 0.346452 | 8_3:-58348225 | Msa1297800:CDS |
| ATACATTCGACTCATATTTA+GGG | 0.349705 | 8_3:+58344177 | None:intergenic |
| AACTTCATACTGACCATTAC+CGG | 0.352920 | 8_3:-58349215 | Msa1297800:CDS |
| TTTACTTATTCATTGGAGTT+GGG | 0.355989 | 8_3:-58348224 | Msa1297800:CDS |
| GTCTATCATTCACACTACTA+TGG | 0.358060 | 8_3:-58344361 | Msa1297800:three_prime_UTR |
| TCTTGGGATTGTTATCTTTG+AGG | 0.367761 | 8_3:-58347693 | Msa1297800:intron |
| GCACCAGGTGTACCAGTTAC+AGG | 0.370589 | 8_3:-58346716 | Msa1297800:CDS |
| TATTTGCAGCCCGAACAATA+AGG | 0.385840 | 8_3:+58346825 | None:intergenic |
| AGTAGAGGAGGATGGCTTGT+AGG | 0.395881 | 8_3:-58349268 | Msa1297800:exon |
| GCTACGGAGTGATCACATTA+TGG | 0.401087 | 8_3:+58344471 | None:intergenic |
| CTGGTTGTGAGTTTACTTGC+TGG | 0.402443 | 8_3:+58344515 | None:intergenic |
| AGAACTGGACTATTGTGAAA+TGG | 0.409773 | 8_3:-58347721 | Msa1297800:CDS |
| GGATCAGTTATGCCTGTAAC+TGG | 0.419390 | 8_3:+58346704 | None:intergenic |
| GTCTGGCAATGGTGGGATAT+GGG | 0.420172 | 8_3:-58349193 | Msa1297800:CDS |
| GAAATTCCAAGGGACAAAAC+TGG | 0.423055 | 8_3:-58347776 | Msa1297800:CDS |
| ACACCTGGTGCAGGTCCTGC+TGG | 0.426917 | 8_3:+58346728 | None:intergenic |
| GTAGAGGAGGATGGCTTGTA+GGG | 0.430148 | 8_3:-58349267 | Msa1297800:exon |
| CGAGAAACGCGTATCGGGTA+AGG | 0.430438 | 8_3:-58349904 | Msa1297800:five_prime_UTR |
| CACCATTGCCAGACCGGTAA+TGG | 0.431922 | 8_3:+58349202 | None:intergenic |
| TTGTGAAATGGGTTGCTCTT+GGG | 0.434631 | 8_3:-58347709 | Msa1297800:CDS |
| TAAAGTTGCGTGACAGTAAT+CGG | 0.437735 | 8_3:-58344088 | Msa1297800:three_prime_UTR |
| AGGTTTATTTACTTATTCAT+TGG | 0.440369 | 8_3:-58348231 | Msa1297800:CDS |
| TTGTTGATCTTAGTAGAGCT+TGG | 0.442554 | 8_3:-58347915 | Msa1297800:CDS |
| ATTGTGAAATGGGTTGCTCT+TGG | 0.443869 | 8_3:-58347710 | Msa1297800:CDS |
| GATGGCTTGTAGGGGTTGCT+GGG | 0.452738 | 8_3:-58349258 | Msa1297800:CDS |
| ATAACTTTCTGAGAGAGAAC+TGG | 0.456234 | 8_3:-58347736 | Msa1297800:CDS |
| AGTTGCGAGAAACGCGTATC+GGG | 0.461929 | 8_3:-58349909 | Msa1297800:five_prime_UTR |
| GGGATATGGGATTTATCTGC+TGG | 0.463999 | 8_3:-58349180 | Msa1297800:CDS |
| GCTCCTTCTGCAGTATGGGC+TGG | 0.476121 | 8_3:-58344581 | Msa1297800:intron |
| CAGTGAAAGGAAAACCAAAC+AGG | 0.481806 | 8_3:+58349802 | None:intergenic |
| ACTCCATGCATCATTTCTGC+TGG | 0.481870 | 8_3:+58346676 | None:intergenic |
| GGTTGAATTCAGTAGAGCTT+CGG | 0.482474 | 8_3:-58349159 | Msa1297800:CDS |
| TGTGTGCTAGCGAACGTGTC+TGG | 0.487436 | 8_3:+58349854 | None:intergenic |
| TTGATAATTTGCCCAAGGCT+TGG | 0.487542 | 8_3:-58349040 | Msa1297800:intron |
| ATTTGCAGCCCGAACAATAA+GGG | 0.490381 | 8_3:+58346826 | None:intergenic |
| GTCTATTGAGCAAAGGCTGA+CGG | 0.505722 | 8_3:+58346750 | None:intergenic |
| GACCATTACCGGTCTGGCAA+TGG | 0.510170 | 8_3:-58349204 | Msa1297800:CDS |
| CAACGGCTCCTCTCTTCAGC+TGG | 0.510530 | 8_3:+58344496 | None:intergenic |
| ATTTCAAAGATTGTTGTTGT+GGG | 0.512206 | 8_3:-58344435 | Msa1297800:three_prime_UTR |
| ACAGCATTCATACCAAGCCT+TGG | 0.517028 | 8_3:+58349028 | None:intergenic |
| CATTACCGGTCTGGCAATGG+TGG | 0.517477 | 8_3:-58349201 | Msa1297800:CDS |
| TCTATGACGCTTTCTGCTGT+CGG | 0.520621 | 8_3:-58349131 | Msa1297800:CDS |
| CAGCATTCATACCAAGCCTT+GGG | 0.520717 | 8_3:+58349029 | None:intergenic |
| TTGCTGGAACCTTTGTGACT+CGG | 0.526208 | 8_3:+58344531 | None:intergenic |
| CATACTGACCATTACCGGTC+TGG | 0.526569 | 8_3:-58349210 | Msa1297800:CDS |
| AATTTCAAAGATTGTTGTTG+TGG | 0.527232 | 8_3:-58344436 | Msa1297800:three_prime_UTR |
| AAACTCTAGTTCAACTTGGC+CGG | 0.527883 | 8_3:-58349100 | Msa1297800:CDS |
| GAACTGGACTATTGTGAAAT+GGG | 0.528635 | 8_3:-58347720 | Msa1297800:CDS |
| TCATCACTATCGTAATCTAC+TGG | 0.531183 | 8_3:+58346800 | None:intergenic |
| TCTATTGAGCAAAGGCTGAC+GGG | 0.533441 | 8_3:+58346751 | None:intergenic |
| ATGCATGGAGTACAAGGATG+AGG | 0.538451 | 8_3:-58346664 | Msa1297800:CDS |
| TAGTTGCGAGAAACGCGTAT+CGG | 0.540201 | 8_3:-58349910 | Msa1297800:five_prime_UTR |
| GAAATGATGCATGGAGTACA+AGG | 0.541340 | 8_3:-58346670 | Msa1297800:CDS |
| TTACTTATTCATTGGAGTTG+GGG | 0.550174 | 8_3:-58348223 | Msa1297800:CDS |
| ATAATTTAGGGAGTAAATGA+AGG | 0.552265 | 8_3:-58344254 | Msa1297800:three_prime_UTR |
| ATATCCCACCATTGCCAGAC+CGG | 0.553232 | 8_3:+58349196 | None:intergenic |
| AATTCAGCCAGCTGTGGCTA+CGG | 0.554186 | 8_3:+58344455 | None:intergenic |
| CCTTTGCTCAATAGACCAGC+AGG | 0.554322 | 8_3:-58346743 | Msa1297800:CDS |
| GCTAGCGAACGTGTCTGGAT+TGG | 0.558228 | 8_3:+58349859 | None:intergenic |
| TGGAACCTTTGTGACTCGGA+TGG | 0.561436 | 8_3:+58344535 | None:intergenic |
| GCAAAGCCATAAGCATAGGC+CGG | 0.571381 | 8_3:+58349081 | None:intergenic |
| GTAACTGGTACACCTGGTGC+AGG | 0.572846 | 8_3:+58346719 | None:intergenic |
| AGAGGCAAAGCCATAAGCAT+AGG | 0.574256 | 8_3:+58349077 | None:intergenic |
| AGTGACATTGTGAGTAGAGG+AGG | 0.590600 | 8_3:-58349280 | Msa1297800:five_prime_UTR |
| CTTTGAAATTCAGCCAGCTG+TGG | 0.593181 | 8_3:+58344449 | None:intergenic |
| GAGTACAAGGATGAGGGAGA+AGG | 0.593909 | 8_3:-58346657 | Msa1297800:intron |
| AGAAACGATGATGACTGGAA+AGG | 0.594603 | 8_3:+58349829 | None:intergenic |
| TAGAGGAGGATGGCTTGTAG+GGG | 0.596376 | 8_3:-58349266 | Msa1297800:exon |
| AGACCAGCAGGACCTGCACC+AGG | 0.600089 | 8_3:-58346731 | Msa1297800:CDS |
| GCAGTATGGGCTGGATACAT+CGG | 0.601573 | 8_3:-58344572 | Msa1297800:intron |
| ATGAAGAGTTCATTAATCCA+AGG | 0.604574 | 8_3:-58346781 | Msa1297800:CDS |
| GATCAAACTCTAGTTCAACT+TGG | 0.604920 | 8_3:-58349104 | Msa1297800:CDS |
| ATTTAGGGCAACATAAAGCA+CGG | 0.607268 | 8_3:+58344192 | None:intergenic |
| GCGAACGTGTCTGGATTGGA+AGG | 0.611402 | 8_3:+58349863 | None:intergenic |
| TCTAGAAGGATACACAGCTC+AGG | 0.613872 | 8_3:+58348139 | None:intergenic |
| TCAAGTGACATTGTGAGTAG+AGG | 0.619216 | 8_3:-58349283 | Msa1297800:five_prime_UTR |
| CCTGCTGGTCTATTGAGCAA+AGG | 0.621233 | 8_3:+58346743 | None:intergenic |
| GCATCATTTCTGCTGGAACG+TGG | 0.623509 | 8_3:+58346683 | None:intergenic |
| TGTTGTGGGCAATGAAGTTG+AGG | 0.623679 | 8_3:-58344421 | Msa1297800:three_prime_UTR |
| GTTGTATTGCATCTATGACA+CGG | 0.627570 | 8_3:-58348173 | Msa1297800:CDS |
| TGCATGGAGTACAAGGATGA+GGG | 0.628268 | 8_3:-58346663 | Msa1297800:CDS |
| ATGCCTGTAACTGGTACACC+TGG | 0.628362 | 8_3:+58346713 | None:intergenic |
| GTTCCAGCAGAAATGATGCA+TGG | 0.636511 | 8_3:-58346679 | Msa1297800:CDS |
| ATTACCGGTCTGGCAATGGT+GGG | 0.644241 | 8_3:-58349200 | Msa1297800:CDS |
| ACTCACAACCAGCTGAAGAG+AGG | 0.649480 | 8_3:-58344504 | Msa1297800:CDS |
| ATTGCATCTATGACACGGAA+TGG | 0.652036 | 8_3:-58348168 | Msa1297800:CDS |
| ACAATCCATCCGAGTCACAA+AGG | 0.653165 | 8_3:-58344540 | Msa1297800:CDS |
| ACATTGTGAGTAGAGGAGGA+TGG | 0.668326 | 8_3:-58349276 | Msa1297800:exon |
| GTGATCACATTATGGTACAA+CGG | 0.682252 | 8_3:+58344479 | None:intergenic |
| GTACTGTTGTCAGTAATTTG+GGG | 0.725730 | 8_3:-58344222 | Msa1297800:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGATCAATTAAAAAAAATT+GGG | - | chr8_3:58344356-58344375 | Msa1297800:three_prime_UTR | 10.0% |
| !! | ATAATTTCATATTAAGTAAA+TGG | - | chr8_3:58347756-58347775 | Msa1297800:CDS | 10.0% |
| !! | TAATTTCATATTAAGTAAAT+GGG | - | chr8_3:58347757-58347776 | Msa1297800:CDS | 10.0% |
| !! | AAACAAATAAATTTCTTATA+TGG | - | chr8_3:58348087-58348106 | Msa1297800:intron | 10.0% |
| !! | AAAAAAGAAGAAGAAAAAAA+TGG | + | chr8_3:58344260-58344279 | None:intergenic | 15.0% |
| !! | GATTATATAGGAAATTATTA+TGG | - | chr8_3:58344312-58344331 | Msa1297800:three_prime_UTR | 15.0% |
| !! | CATGATCAATTAAAAAAAAT+TGG | - | chr8_3:58344355-58344374 | Msa1297800:three_prime_UTR | 15.0% |
| !! | TGATCAATTAAAAAAAATTG+GGG | - | chr8_3:58344357-58344376 | Msa1297800:three_prime_UTR | 15.0% |
| !!! | TTCTTAATTTGACAAAATTA+AGG | - | chr8_3:58344453-58344472 | Msa1297800:three_prime_UTR | 15.0% |
| !!! | AATGAAATTACTTTATTTAC+TGG | - | chr8_3:58345416-58345435 | Msa1297800:intron | 15.0% |
| !!! | GTTTTTGTCAAAAAATATAA+AGG | + | chr8_3:58346043-58346062 | None:intergenic | 15.0% |
| !!! | TTATATTTTTTGACAAAAAC+TGG | - | chr8_3:58346043-58346062 | Msa1297800:intron | 15.0% |
| !! | AAAAGAAGATAATTATAAGA+TGG | + | chr8_3:58346125-58346144 | None:intergenic | 15.0% |
| !! | GGGTAAATATAAAATTAAAT+AGG | - | chr8_3:58346797-58346816 | Msa1297800:CDS | 15.0% |
| !! | AAAATATAGTGATAAATTGT+TGG | - | chr8_3:58347515-58347534 | Msa1297800:intron | 15.0% |
| !!! | ATTTTTCATATATTCTAACA+AGG | + | chr8_3:58347566-58347585 | None:intergenic | 15.0% |
| !!! | TTTTAATATTGACTAAACAA+GGG | + | chr8_3:58347691-58347710 | None:intergenic | 15.0% |
| !! | AATTTCATATTAAGTAAATG+GGG | - | chr8_3:58347758-58347777 | Msa1297800:CDS | 15.0% |
| !!! | TAAATTAAGATTTTTTCGTT+AGG | + | chr8_3:58348475-58348494 | None:intergenic | 15.0% |
| !!! | TCATTTTCTCAAATTATTAT+TGG | - | chr8_3:58348797-58348816 | Msa1297800:intron | 15.0% |
| !! | AAACTTTAGTAAATGATTAT+CGG | - | chr8_3:58349910-58349929 | Msa1297800:five_prime_UTR | 15.0% |
| !! | AAATAAGTATGATTGATAGA+AGG | + | chr8_3:58344217-58344236 | None:intergenic | 20.0% |
| !! | GATCAATTAAAAAAAATTGG+GGG | - | chr8_3:58344358-58344377 | Msa1297800:three_prime_UTR | 20.0% |
| !! | AATTTGACAAAATTAAGGTT+AGG | - | chr8_3:58344458-58344477 | Msa1297800:three_prime_UTR | 20.0% |
| !! | AATAATGTGTAAAATGCATT+TGG | - | chr8_3:58345178-58345197 | Msa1297800:intron | 20.0% |
| !! | ATAATGTGTAAAATGCATTT+GGG | - | chr8_3:58345179-58345198 | Msa1297800:intron | 20.0% |
| !! | GTATATTAAAGTAACAATTG+TGG | + | chr8_3:58345615-58345634 | None:intergenic | 20.0% |
| !! | AGGTTTATTTACTTATTCAT+TGG | - | chr8_3:58345693-58345712 | Msa1297800:intron | 20.0% |
| !!! | CTTATAATTATCTTCTTTTC+AGG | - | chr8_3:58346126-58346145 | Msa1297800:intron | 20.0% |
| !!! | CTTCTAGTAAATGAATTTTT+TGG | - | chr8_3:58346640-58346659 | Msa1297800:intron | 20.0% |
| !! | ATTAAACGAAAGATATGTTA+CGG | + | chr8_3:58346889-58346908 | None:intergenic | 20.0% |
| !!! | ATACACATTTACATTTGTTA+TGG | + | chr8_3:58347444-58347463 | None:intergenic | 20.0% |
| !! | TAACATCATATCTTAATCTT+AGG | - | chr8_3:58347628-58347647 | Msa1297800:intron | 20.0% |
| !!! | CTTTTAATATTGACTAAACA+AGG | + | chr8_3:58347692-58347711 | None:intergenic | 20.0% |
| !! | ATTTCATATTAAGTAAATGG+GGG | - | chr8_3:58347759-58347778 | Msa1297800:CDS | 20.0% |
| !!! | ATAAGAGAAGATATGTTTTT+AGG | - | chr8_3:58348110-58348129 | Msa1297800:intron | 20.0% |
| !! | AAATCTTATAAGGAAAACTT+TGG | + | chr8_3:58348369-58348388 | None:intergenic | 20.0% |
| !!! | AAAGTTTTCCTTATAAGATT+TGG | - | chr8_3:58348368-58348387 | Msa1297800:intron | 20.0% |
| !!! | AAGTTTTCCTTATAAGATTT+GGG | - | chr8_3:58348369-58348388 | Msa1297800:intron | 20.0% |
| !! | ATTGCGAAGTTGAAATTTTT+GGG | + | chr8_3:58344150-58344169 | None:intergenic | 25.0% |
| !! | AATTGCGAAGTTGAAATTTT+TGG | + | chr8_3:58344151-58344170 | None:intergenic | 25.0% |
| !! | TTTTCTGAGCTAGATTATAT+AGG | - | chr8_3:58344300-58344319 | Msa1297800:three_prime_UTR | 25.0% |
| ! | AATCTTGGGAAAAAAATGAT+GGG | + | chr8_3:58344421-58344440 | None:intergenic | 25.0% |
| ! | AAATCTTGGGAAAAAAATGA+TGG | + | chr8_3:58344422-58344441 | None:intergenic | 25.0% |
| ! | CATGAATTCTATAAGACAAT+TGG | + | chr8_3:58344495-58344514 | None:intergenic | 25.0% |
| ! | GAGAAAAAAATATTGTGCAT+TGG | - | chr8_3:58344591-58344610 | Msa1297800:intron | 25.0% |
| !!! | TCTGTTTTGATTTTGATTGA+AGG | - | chr8_3:58344616-58344635 | Msa1297800:intron | 25.0% |
| ! | CAAACTCTAATGAAAACAAA+AGG | + | chr8_3:58345006-58345025 | None:intergenic | 25.0% |
| !!! | ATTATTTTTCCAAAGCAAGT+TGG | + | chr8_3:58345164-58345183 | None:intergenic | 25.0% |
| ! | TTTATTTACTGGCCATATAT+TGG | - | chr8_3:58345427-58345446 | Msa1297800:intron | 25.0% |
| ! | GTGGTGAATATAATTCATTA+GGG | + | chr8_3:58345596-58345615 | None:intergenic | 25.0% |
| ! | TGTGGTGAATATAATTCATT+AGG | + | chr8_3:58345597-58345616 | None:intergenic | 25.0% |
| ! | ATTTACTTATTCATTGGAGT+TGG | - | chr8_3:58345699-58345718 | Msa1297800:intron | 25.0% |
| ! | TTTACTTATTCATTGGAGTT+GGG | - | chr8_3:58345700-58345719 | Msa1297800:intron | 25.0% |
| ! | AAGAACACAGTAAATATGTT+AGG | + | chr8_3:58345827-58345846 | None:intergenic | 25.0% |
| ! | TGGTTGTACAAATATCAAAA+TGG | + | chr8_3:58346298-58346317 | None:intergenic | 25.0% |
| ! | TCCAAAAAGTTGTTACAAAA+TGG | - | chr8_3:58346461-58346480 | Msa1297800:intron | 25.0% |
| !! | ACCATTTTGTAACAACTTTT+TGG | + | chr8_3:58346465-58346484 | None:intergenic | 25.0% |
| ! | AGTTCTTGAGTAATGTTATT+TGG | + | chr8_3:58346491-58346510 | None:intergenic | 25.0% |
| ! | AGAACATACTATTAAAAGCA+TGG | + | chr8_3:58346666-58346685 | None:intergenic | 25.0% |
| ! | CGATTAAAAGTGAAATCATA+AGG | - | chr8_3:58346688-58346707 | Msa1297800:CDS | 25.0% |
| !!! | ACTTTGAAATTCAAATGTCT+TGG | - | chr8_3:58346847-58346866 | Msa1297800:CDS | 25.0% |
| ! | TTAAACGAAAGATATGTTAC+GGG | + | chr8_3:58346888-58346907 | None:intergenic | 25.0% |
| ! | TACAATTCCATAAGCATAAT+CGG | + | chr8_3:58347058-58347077 | None:intergenic | 25.0% |
| !! | ACTATATTTTATTCTCGAGA+AGG | + | chr8_3:58347505-58347524 | None:intergenic | 25.0% |
| !!! | TAGGATTAGTTTTACAGATT+CGG | - | chr8_3:58347647-58347666 | Msa1297800:intron | 25.0% |
| !! | TATTAAAAGTATAGCACATG+TGG | - | chr8_3:58347703-58347722 | Msa1297800:CDS | 25.0% |
| ! | TATCTTTGAATTTGGACAAT+AGG | + | chr8_3:58348442-58348461 | None:intergenic | 25.0% |
| ! | AATCTTAATTTATGCCTACT+CGG | - | chr8_3:58348483-58348502 | Msa1297800:intron | 25.0% |
| ! | GATTTCATGTCTATAATGAA+TGG | - | chr8_3:58349064-58349083 | Msa1297800:CDS | 25.0% |
| !! | AATTTCAAAGATTGTTGTTG+TGG | - | chr8_3:58349488-58349507 | Msa1297800:intron | 25.0% |
| !! | ATTTCAAAGATTGTTGTTGT+GGG | - | chr8_3:58349489-58349508 | Msa1297800:intron | 25.0% |
| ! | AGAAAACATCACCATAATTT+AGG | - | chr8_3:58349657-58349676 | Msa1297800:intron | 25.0% |
| ! | GAAAACATCACCATAATTTA+GGG | - | chr8_3:58349658-58349677 | Msa1297800:intron | 25.0% |
| ! | TTCATTTACTCCCTAAATTA+TGG | + | chr8_3:58349671-58349690 | None:intergenic | 25.0% |
| ! | ATAATTTAGGGAGTAAATGA+AGG | - | chr8_3:58349670-58349689 | Msa1297800:intron | 25.0% |
| ! | ATACATTCGACTCATATTTA+GGG | + | chr8_3:58349750-58349769 | None:intergenic | 25.0% |
| ! | AAAAATAAACACCAGAATGA+AGG | + | chr8_3:58349810-58349829 | None:intergenic | 25.0% |
| !!! | AAATTTTTGGGATCAGTGAA+AGG | + | chr8_3:58344138-58344157 | None:intergenic | 30.0% |
| ! | TTTTCCCAAGATTTTTCTAC+TGG | - | chr8_3:58344428-58344447 | Msa1297800:three_prime_UTR | 30.0% |
| ! | TTTCCCAAGATTTTTCTACT+GGG | - | chr8_3:58344429-58344448 | Msa1297800:three_prime_UTR | 30.0% |
| AAACCCAGTAGAAAAATCTT+GGG | + | chr8_3:58344435-58344454 | None:intergenic | 30.0% | |
| AATTAAGGTTAGGATTGACA+TGG | - | chr8_3:58344468-58344487 | Msa1297800:exon | 30.0% | |
| ATTAAGGTTAGGATTGACAT+GGG | - | chr8_3:58344469-58344488 | Msa1297800:exon | 30.0% | |
| CACAAAAGACATGAAATGAA+AGG | + | chr8_3:58344569-58344588 | None:intergenic | 30.0% | |
| TCAAAAATGTTGTCAGAAAG+AGG | + | chr8_3:58344868-58344887 | None:intergenic | 30.0% | |
| !! | CATTTTTGATAATTTGCCCA+AGG | - | chr8_3:58344879-58344898 | Msa1297800:intron | 30.0% |
| AATCAATACGCTTCAAAAAC+AGG | + | chr8_3:58344932-58344951 | None:intergenic | 30.0% | |
| !! | ATTAGAGTTTGTTGCTACAT+TGG | - | chr8_3:58345015-58345034 | Msa1297800:intron | 30.0% |
| ! | CTGATATGACCTGTATTTTA+AGG | - | chr8_3:58345257-58345276 | Msa1297800:intron | 30.0% |
| CAACAGAAACCTTAAAATAC+AGG | + | chr8_3:58345269-58345288 | None:intergenic | 30.0% | |
| ATAGCACAACTACATTCAAT+TGG | + | chr8_3:58345320-58345339 | None:intergenic | 30.0% | |
| GTGTAGTGTATACCAATATA+TGG | + | chr8_3:58345442-58345461 | None:intergenic | 30.0% | |
| !! | GGTTATTTCTAACTCAAATC+TGG | + | chr8_3:58345466-58345485 | None:intergenic | 30.0% |
| AATACAAAGATGATACCTGT+AGG | + | chr8_3:58345503-58345522 | None:intergenic | 30.0% | |
| ATAATTCATTAGGGTGAACA+CGG | + | chr8_3:58345587-58345606 | None:intergenic | 30.0% | |
| CTGATTGTGTATTTCATGTT+TGG | - | chr8_3:58345669-58345688 | Msa1297800:intron | 30.0% | |
| TTACTTATTCATTGGAGTTG+GGG | - | chr8_3:58345701-58345720 | Msa1297800:intron | 30.0% | |
| ATAGCATAAGACATTCTAGA+AGG | + | chr8_3:58345802-58345821 | None:intergenic | 30.0% | |
| CTGAATACTTTGTTGGATTA+AGG | + | chr8_3:58345978-58345997 | None:intergenic | 30.0% | |
| !! | TCCAACAAAGTATTCAGTTT+TGG | - | chr8_3:58345981-58346000 | Msa1297800:intron | 30.0% |
| ACCAAAACTGAATACTTTGT+TGG | + | chr8_3:58345985-58346004 | None:intergenic | 30.0% | |
| !! | AACAAAGTATTCAGTTTTGG+TGG | - | chr8_3:58345984-58346003 | Msa1297800:intron | 30.0% |
| ! | TTTTGACAAAAACTGGAAAG+AGG | - | chr8_3:58346050-58346069 | Msa1297800:intron | 30.0% |
| !! | TTCTTTTCAGGAAATTCCAA+GGG | - | chr8_3:58346138-58346157 | Msa1297800:intron | 30.0% |
| ! | TGGCGTATTTTCAATCATAA+CGG | + | chr8_3:58346267-58346286 | None:intergenic | 30.0% |
| ATATCAAAATGGTTGTCTCT+TGG | + | chr8_3:58346287-58346306 | None:intergenic | 30.0% | |
| AAAAGAATAGAGAGAGAAAG+AGG | + | chr8_3:58346409-58346428 | None:intergenic | 30.0% | |
| TCATAAGGATATAGTTTCAC+AGG | - | chr8_3:58346703-58346722 | Msa1297800:CDS | 30.0% | |
| CATAAGGATATAGTTTCACA+GGG | - | chr8_3:58346704-58346723 | Msa1297800:CDS | 30.0% | |
| GCAAAAAGAAGAAGACAAAA+TGG | - | chr8_3:58346768-58346787 | Msa1297800:CDS | 30.0% | |
| AGAAGAAGACAAAATGGTTA+AGG | - | chr8_3:58346774-58346793 | Msa1297800:CDS | 30.0% | |
| GAAGAAGACAAAATGGTTAA+GGG | - | chr8_3:58346775-58346794 | Msa1297800:CDS | 30.0% | |
| AAGAAGACAAAATGGTTAAG+GGG | - | chr8_3:58346776-58346795 | Msa1297800:CDS | 30.0% | |
| GATTATGCTTATGGAATTGT+AGG | - | chr8_3:58347057-58347076 | Msa1297800:intron | 30.0% | |
| ATGAAGAGTTCATTAATCCA+AGG | - | chr8_3:58347143-58347162 | Msa1297800:intron | 30.0% | |
| !! | TTGTCGTAAGTTTTAATCTG+TGG | - | chr8_3:58347354-58347373 | Msa1297800:intron | 30.0% |
| !! | TGTGGTGCTATTATAATCAA+TGG | - | chr8_3:58347372-58347391 | Msa1297800:intron | 30.0% |
| AAGTGAATCATAAACCTCTT+TGG | + | chr8_3:58347413-58347432 | None:intergenic | 30.0% | |
| !! | ATTTTAGCCTACAATATCCT+AGG | - | chr8_3:58347602-58347621 | Msa1297800:intron | 30.0% |
| AAGATATGATGTTATGTCCT+AGG | + | chr8_3:58347622-58347641 | None:intergenic | 30.0% | |
| TATTAAGTAAATGGGGGATT+AGG | - | chr8_3:58347765-58347784 | Msa1297800:CDS | 30.0% | |
| TGTACTCTATTCATTCTTTG+AGG | - | chr8_3:58347824-58347843 | Msa1297800:intron | 30.0% | |
| AAAAAAAGAGTGACTTGACT+TGG | - | chr8_3:58347851-58347870 | Msa1297800:intron | 30.0% | |
| ATATCTACATGATCCATTTG+AGG | - | chr8_3:58347891-58347910 | Msa1297800:CDS | 30.0% | |
| ACAAATGCAAGTGGAATAAT+AGG | + | chr8_3:58348282-58348301 | None:intergenic | 30.0% | |
| AAAACTTTGGTCAAATCTCT+AGG | + | chr8_3:58348356-58348375 | None:intergenic | 30.0% | |
| CTCAATGCTATCTTTGAATT+TGG | + | chr8_3:58348450-58348469 | None:intergenic | 30.0% | |
| !!! | TACATCAGCACACTTTTTTT+GGG | - | chr8_3:58348517-58348536 | Msa1297800:intron | 30.0% |
| TGGAAAAAGTTGACCTTATA+CGG | + | chr8_3:58348939-58348958 | None:intergenic | 30.0% | |
| ! | TTTTTCCATATGTTGGATCT+AGG | - | chr8_3:58348951-58348970 | Msa1297800:intron | 30.0% |
| GTGAAAATACCAATGCAAAA+AGG | + | chr8_3:58349137-58349156 | None:intergenic | 30.0% | |
| AAATACCAATGCAAAAAGGA+TGG | + | chr8_3:58349133-58349152 | None:intergenic | 30.0% | |
| GTGAAAATACCAATGCAAAA+AGG | + | chr8_3:58349137-58349156 | None:intergenic | 30.0% | |
| GATACATTCGACTCATATTT+AGG | + | chr8_3:58349751-58349770 | None:intergenic | 30.0% | |
| !!! | GGTGTGTATTTTAATTTGTG+AGG | + | chr8_3:58349789-58349808 | None:intergenic | 30.0% |
| TAAAATACACACCTTCATTC+TGG | - | chr8_3:58349796-58349815 | Msa1297800:five_prime_UTR | 30.0% | |
| GAAAAAGAAACGATGATGAC+TGG | + | chr8_3:58344103-58344122 | None:intergenic | 35.0% | |
| ! | CATCGTTTCTTTTTCCTGTT+TGG | - | chr8_3:58344108-58344127 | Msa1297800:three_prime_UTR | 35.0% |
| GAAACCCAGTAGAAAAATCT+TGG | + | chr8_3:58344436-58344455 | None:intergenic | 35.0% | |
| ! | AGACCATGCTGTTAATGTTT+TGG | - | chr8_3:58344541-58344560 | Msa1297800:CDS | 35.0% |
| GAACCAAAACATTAACAGCA+TGG | + | chr8_3:58344547-58344566 | None:intergenic | 35.0% | |
| AACTTCATACTGACCATTAC+CGG | - | chr8_3:58344709-58344728 | Msa1297800:intron | 35.0% | |
| ! | GATCAAACTCTAGTTCAACT+TGG | - | chr8_3:58344820-58344839 | Msa1297800:intron | 35.0% |
| TTGATTGTCGTAGAGTTTAC+AGG | - | chr8_3:58344969-58344988 | Msa1297800:intron | 35.0% | |
| ! | TAATTTGTGCCTGTGCTAAT+GGG | - | chr8_3:58345062-58345081 | Msa1297800:intron | 35.0% |
| ! | TTTTCCTGCAAGATTCACTT+AGG | - | chr8_3:58345202-58345221 | Msa1297800:intron | 35.0% |
| TTCACTTAGGTCATAGGAAT+CGG | - | chr8_3:58345215-58345234 | Msa1297800:intron | 35.0% | |
| CAACTACATTCAATTGGCAT+TGG | + | chr8_3:58345314-58345333 | None:intergenic | 35.0% | |
| GAATGTAGTTGTGCTATAGT+TGG | - | chr8_3:58345323-58345342 | Msa1297800:intron | 35.0% | |
| ! | TGGAAGCATGCTTCATTATT+TGG | - | chr8_3:58345343-58345362 | Msa1297800:intron | 35.0% |
| CTGTAGGTCTGATAAAATAG+AGG | + | chr8_3:58345487-58345506 | None:intergenic | 35.0% | |
| ! | CTCTATTTTATCAGACCTAC+AGG | - | chr8_3:58345485-58345504 | Msa1297800:intron | 35.0% |
| TTGTGTATTTCATGTTTGGC+AGG | - | chr8_3:58345673-58345692 | Msa1297800:intron | 35.0% | |
| !! | CTCTTTGTCGTTTCTTGTTT+TGG | - | chr8_3:58345729-58345748 | Msa1297800:intron | 35.0% |
| GTTGTATTGCATCTATGACA+CGG | - | chr8_3:58345751-58345770 | Msa1297800:intron | 35.0% | |
| ! | GATGCTTTAACTCATGCTTT+TGG | + | chr8_3:58345867-58345886 | None:intergenic | 35.0% |
| AAACACAAACACACATGTAG+AGG | + | chr8_3:58345909-58345928 | None:intergenic | 35.0% | |
| TTGTTGATCTTAGTAGAGCT+TGG | - | chr8_3:58346009-58346028 | Msa1297800:intron | 35.0% | |
| !! | CTTCTTTTCAGGAAATTCCA+AGG | - | chr8_3:58346137-58346156 | Msa1297800:intron | 35.0% |
| ! | ATAACTTTCTGAGAGAGAAC+TGG | - | chr8_3:58346188-58346207 | Msa1297800:intron | 35.0% |
| AGAACTGGACTATTGTGAAA+TGG | - | chr8_3:58346203-58346222 | Msa1297800:intron | 35.0% | |
| GAACTGGACTATTGTGAAAT+GGG | - | chr8_3:58346204-58346223 | Msa1297800:intron | 35.0% | |
| TCTTGGGATTGTTATCTTTG+AGG | - | chr8_3:58346231-58346250 | Msa1297800:intron | 35.0% | |
| TTACAATCAACTTGGCTGTA+TGG | + | chr8_3:58346587-58346606 | None:intergenic | 35.0% | |
| ! | GATGTTGGTTACAATCAACT+TGG | + | chr8_3:58346595-58346614 | None:intergenic | 35.0% |
| TGTAATAACTACCAGGATGT+TGG | + | chr8_3:58346610-58346629 | None:intergenic | 35.0% | |
| ! | CATTTACTAGAAGTTGACTC+TGG | + | chr8_3:58346633-58346652 | None:intergenic | 35.0% |
| AGAAGACAAAATGGTTAAGG+GGG | - | chr8_3:58346777-58346796 | Msa1297800:CDS | 35.0% | |
| TCATCTTAGCCCTTATTGTT+CGG | - | chr8_3:58347089-58347108 | Msa1297800:intron | 35.0% | |
| TCATCACTATCGTAATCTAC+TGG | + | chr8_3:58347127-58347146 | None:intergenic | 35.0% | |
| AAACTATTGCAAGTTCCCAA+GGG | + | chr8_3:58347541-58347560 | None:intergenic | 35.0% | |
| GTTATGTCCTAGGATATTGT+AGG | + | chr8_3:58347612-58347631 | None:intergenic | 35.0% | |
| AGTATAGCACATGTGGAAAT+AGG | - | chr8_3:58347710-58347729 | Msa1297800:CDS | 35.0% | |
| CAATTCTTCTCACAACATGA+TGG | + | chr8_3:58347799-58347818 | None:intergenic | 35.0% | |
| CATCATGTTGTGAGAAGAAT+TGG | - | chr8_3:58347797-58347816 | Msa1297800:intron | 35.0% | |
| GACAAAAATGTCTCTTCTCT+TGG | - | chr8_3:58347939-58347958 | Msa1297800:intron | 35.0% | |
| !! | GTGCAAGACGTGTTTTAAAT+AGG | - | chr8_3:58347994-58348013 | Msa1297800:intron | 35.0% |
| !! | TTTGTGCAACATTTTGACAC+TGG | - | chr8_3:58348029-58348048 | Msa1297800:intron | 35.0% |
| TTCCTTGCAAACAACACATT+TGG | + | chr8_3:58348312-58348331 | None:intergenic | 35.0% | |
| !!! | GTACATCAGCACACTTTTTT+TGG | - | chr8_3:58348516-58348535 | Msa1297800:intron | 35.0% |
| CAGGAAATCAGAAAGGAAAA+CGG | + | chr8_3:58348545-58348564 | None:intergenic | 35.0% | |
| CATACTAGATACTCCAAAGA+TGG | + | chr8_3:58348585-58348604 | None:intergenic | 35.0% | |
| TCATAGGATAAAGTGCATGT+GGG | + | chr8_3:58348681-58348700 | None:intergenic | 35.0% | |
| TTCATAGGATAAAGTGCATG+TGG | + | chr8_3:58348682-58348701 | None:intergenic | 35.0% | |
| TTCAGTGTAATCGTATGTGT+TGG | + | chr8_3:58348764-58348783 | None:intergenic | 35.0% | |
| GAGATACACTCTATGAAGTA+CGG | + | chr8_3:58348840-58348859 | None:intergenic | 35.0% | |
| !!! | TCTCTGCCTGCTATTTTTAT+AGG | - | chr8_3:58348856-58348875 | Msa1297800:intron | 35.0% |
| !!! | CTCTGCCTGCTATTTTTATA+GGG | - | chr8_3:58348857-58348876 | Msa1297800:intron | 35.0% |
| CTAGTCCCTATAAAAATAGC+AGG | + | chr8_3:58348865-58348884 | None:intergenic | 35.0% | |
| !!! | AGCTACTTTTTGGGTTGATT+AGG | + | chr8_3:58348894-58348913 | None:intergenic | 35.0% |
| AAAGTTGACCTTATACGGTT+TGG | + | chr8_3:58348934-58348953 | None:intergenic | 35.0% | |
| !! | GGTCAACTTTTTCCATATGT+TGG | - | chr8_3:58348944-58348963 | Msa1297800:intron | 35.0% |
| AACTACCTAGATCCAACATA+TGG | + | chr8_3:58348959-58348978 | None:intergenic | 35.0% | |
| GATCTAGGTAGTTAGTATCT+GGG | - | chr8_3:58348966-58348985 | Msa1297800:intron | 35.0% | |
| ACGAAAAACACAGTACAATC+AGG | + | chr8_3:58349095-58349114 | None:intergenic | 35.0% | |
| CAAAAAGGATGGCAAATAGA+CGG | + | chr8_3:58349165-58349184 | None:intergenic | 35.0% | |
| ! | ATTTGCCATCCTTTTTGCAT+TGG | - | chr8_3:58349168-58349187 | Msa1297800:CDS | 35.0% |
| CTATTTACATAGCCCTGTTT+AGG | - | chr8_3:58349216-58349235 | Msa1297800:CDS | 35.0% | |
| ATCAGAGATAGTCCTAAACA+GGG | + | chr8_3:58349231-58349250 | None:intergenic | 35.0% | |
| AATCAGAGATAGTCCTAAAC+AGG | + | chr8_3:58349232-58349251 | None:intergenic | 35.0% | |
| TGTTGCAAGAGACTATTGAA+AGG | - | chr8_3:58349251-58349270 | Msa1297800:CDS | 35.0% | |
| GTTGCAAGAGACTATTGAAA+GGG | - | chr8_3:58349252-58349271 | Msa1297800:CDS | 35.0% | |
| GTGATCACATTATGGTACAA+CGG | + | chr8_3:58349448-58349467 | None:intergenic | 35.0% | |
| GTCTATCATTCACACTACTA+TGG | - | chr8_3:58349563-58349582 | Msa1297800:intron | 35.0% | |
| CATGTCATGGAAAAAAGTGA+TGG | + | chr8_3:58349593-58349612 | None:intergenic | 35.0% | |
| ! | GAAGATGTGTTTTCATGTCA+TGG | + | chr8_3:58349606-58349625 | None:intergenic | 35.0% |
| ACGTACTGTTGTCAGTAATT+TGG | - | chr8_3:58349700-58349719 | Msa1297800:intron | 35.0% | |
| CGTACTGTTGTCAGTAATTT+GGG | - | chr8_3:58349701-58349720 | Msa1297800:intron | 35.0% | |
| GTACTGTTGTCAGTAATTTG+GGG | - | chr8_3:58349702-58349721 | Msa1297800:intron | 35.0% | |
| ! | ATTTAGGGCAACATAAAGCA+CGG | + | chr8_3:58349735-58349754 | None:intergenic | 35.0% |
| TAAAGTTGCGTGACAGTAAT+CGG | - | chr8_3:58349836-58349855 | Msa1297800:five_prime_UTR | 35.0% | |
| AGAAACGATGATGACTGGAA+AGG | + | chr8_3:58344098-58344117 | None:intergenic | 40.0% | |
| CAGTGAAAGGAAAACCAAAC+AGG | + | chr8_3:58344125-58344144 | None:intergenic | 40.0% | |
| TCAAGTGACATTGTGAGTAG+AGG | - | chr8_3:58344641-58344660 | Msa1297800:intron | 40.0% | |
| GGTTGAATTCAGTAGAGCTT+CGG | - | chr8_3:58344765-58344784 | Msa1297800:intron | 40.0% | |
| ! | AAACTCTAGTTCAACTTGGC+CGG | - | chr8_3:58344824-58344843 | Msa1297800:intron | 40.0% |
| ! | TTGATAATTTGCCCAAGGCT+TGG | - | chr8_3:58344884-58344903 | Msa1297800:intron | 40.0% |
| GCTTCAAAAACAGGCAAGAA+AGG | + | chr8_3:58344923-58344942 | None:intergenic | 40.0% | |
| ! | GTAATTTGTGCCTGTGCTAA+TGG | - | chr8_3:58345061-58345080 | Msa1297800:intron | 40.0% |
| AATTTGTGCCTGTGCTAATG+GGG | - | chr8_3:58345063-58345082 | Msa1297800:intron | 40.0% | |
| ! | GAAACTACTCCAACTTGCTT+TGG | - | chr8_3:58345152-58345171 | Msa1297800:intron | 40.0% |
| ATGACCTAAGTGAATCTTGC+AGG | + | chr8_3:58345209-58345228 | None:intergenic | 40.0% | |
| GCAAGATTCACTTAGGTCAT+AGG | - | chr8_3:58345209-58345228 | Msa1297800:intron | 40.0% | |
| TTCTGTTGTAAGCAGCTATG+CGG | - | chr8_3:58345281-58345300 | Msa1297800:intron | 40.0% | |
| ATTGCATCTATGACACGGAA+TGG | - | chr8_3:58345756-58345775 | Msa1297800:intron | 40.0% | |
| ACAAACACACATGTAGAGGA+GGG | + | chr8_3:58345905-58345924 | None:intergenic | 40.0% | |
| GAAATTCCAAGGGACAAAAC+TGG | - | chr8_3:58346148-58346167 | Msa1297800:intron | 40.0% | |
| !! | AAATCTCCAGTTTTGTCCCT+TGG | + | chr8_3:58346157-58346176 | None:intergenic | 40.0% |
| !! | ATTGTGAAATGGGTTGCTCT+TGG | - | chr8_3:58346214-58346233 | Msa1297800:intron | 40.0% |
| !! | TTGTGAAATGGGTTGCTCTT+GGG | - | chr8_3:58346215-58346234 | Msa1297800:intron | 40.0% |
| GAACAACGGTTGTCTCTAAA+TGG | + | chr8_3:58346318-58346337 | None:intergenic | 40.0% | |
| AGAGAGAGAGAGTTGAACAA+CGG | + | chr8_3:58346332-58346351 | None:intergenic | 40.0% | |
| AATCAACTTGGCTGTATGGT+AGG | + | chr8_3:58346583-58346602 | None:intergenic | 40.0% | |
| GTTGATTGTAACCAACATCC+TGG | - | chr8_3:58346596-58346615 | Msa1297800:intron | 40.0% | |
| ACTCTGGTGTAATAACTACC+AGG | + | chr8_3:58346617-58346636 | None:intergenic | 40.0% | |
| CGAAAGATATGTTACGGGTA+AGG | + | chr8_3:58346883-58346902 | None:intergenic | 40.0% | |
| !! | TGATGTGCCGATTATGCTTA+TGG | - | chr8_3:58347048-58347067 | Msa1297800:intron | 40.0% |
| CATCTTAGCCCTTATTGTTC+GGG | - | chr8_3:58347090-58347109 | Msa1297800:intron | 40.0% | |
| ATTTGCAGCCCGAACAATAA+GGG | + | chr8_3:58347101-58347120 | None:intergenic | 40.0% | |
| TATTTGCAGCCCGAACAATA+AGG | + | chr8_3:58347102-58347121 | None:intergenic | 40.0% | |
| TTATTGTTCGGGCTGCAAAT+AGG | - | chr8_3:58347101-58347120 | Msa1297800:intron | 40.0% | |
| GAAATGATGCATGGAGTACA+AGG | - | chr8_3:58347254-58347273 | Msa1297800:intron | 40.0% | |
| ! | AATCAATGGTGAAGCCCTTT+TGG | - | chr8_3:58347386-58347405 | Msa1297800:intron | 40.0% |
| ! | ATCAATGGTGAAGCCCTTTT+GGG | - | chr8_3:58347387-58347406 | Msa1297800:intron | 40.0% |
| TAAACCTCTTTGGCCCAAAA+GGG | + | chr8_3:58347403-58347422 | None:intergenic | 40.0% | |
| ATAAACCTCTTTGGCCCAAA+AGG | + | chr8_3:58347404-58347423 | None:intergenic | 40.0% | |
| AGTGATAAATTGTTGGCCCT+TGG | - | chr8_3:58347522-58347541 | Msa1297800:intron | 40.0% | |
| GTGATAAATTGTTGGCCCTT+GGG | - | chr8_3:58347523-58347542 | Msa1297800:intron | 40.0% | |
| CAAACTATTGCAAGTTCCCA+AGG | + | chr8_3:58347542-58347561 | None:intergenic | 40.0% | |
| CTACATGATCCATTTGAGGA+TGG | - | chr8_3:58347895-58347914 | Msa1297800:CDS | 40.0% | |
| TTCGTTATGATCGCATGTCT+TGG | - | chr8_3:58348137-58348156 | Msa1297800:intron | 40.0% | |
| !! | CAAACAACACATTTGGTGTG+TGG | + | chr8_3:58348305-58348324 | None:intergenic | 40.0% |
| !! | CACCAAATGTGTTGTTTGCA+AGG | - | chr8_3:58348307-58348326 | Msa1297800:intron | 40.0% |
| AGGACTGCCCAAATCTTATA+AGG | + | chr8_3:58348379-58348398 | None:intergenic | 40.0% | |
| AAAAGCAAGCTCAAAAGGTG+AGG | + | chr8_3:58348405-58348424 | None:intergenic | 40.0% | |
| !! | TCACCTTTTGAGCTTGCTTT+TGG | - | chr8_3:58348404-58348423 | Msa1297800:intron | 40.0% |
| !! | CACCTTTTGAGCTTGCTTTT+GGG | - | chr8_3:58348405-58348424 | Msa1297800:intron | 40.0% |
| !! | ACCTTTTGAGCTTGCTTTTG+GGG | - | chr8_3:58348406-58348425 | Msa1297800:intron | 40.0% |
| !!! | CTTGCTTTTGGGGTTGAATT+AGG | - | chr8_3:58348416-58348435 | Msa1297800:intron | 40.0% |
| CTTAATTTATGCCTACTCGG+TGG | - | chr8_3:58348486-58348505 | Msa1297800:intron | 40.0% | |
| ! | CGTTTTCCTTTCTGATTTCC+TGG | - | chr8_3:58348543-58348562 | Msa1297800:intron | 40.0% |
| TGGAAACCAGGAAATCAGAA+AGG | + | chr8_3:58348552-58348571 | None:intergenic | 40.0% | |
| ACTAGATACTCCAAAGATGG+AGG | + | chr8_3:58348582-58348601 | None:intergenic | 40.0% | |
| !! | TATTATTGGTGTCGACGTGT+CGG | - | chr8_3:58348811-58348830 | Msa1297800:intron | 40.0% |
| AACCCAAAAAGTAGCTCAAG+AGG | - | chr8_3:58348898-58348917 | Msa1297800:intron | 40.0% | |
| GGATCTAGGTAGTTAGTATC+TGG | - | chr8_3:58348965-58348984 | Msa1297800:intron | 40.0% | |
| TAGTTAGTATCTGGGCCATA+TGG | - | chr8_3:58348974-58348993 | Msa1297800:intron | 40.0% | |
| ! | TATACAACATGGGTGCCATA+TGG | + | chr8_3:58348992-58349011 | None:intergenic | 40.0% |
| ! | GCATGATGTCCTTTTTGCAT+TGG | - | chr8_3:58349125-58349144 | Msa1297800:CDS | 40.0% |
| TAGTTGCGAGAAACGCGTAT+CGG | - | chr8_3:58344014-58344033 | Msa1297800:three_prime_UTR | 45.0% | |
| AGTGACATTGTGAGTAGAGG+AGG | - | chr8_3:58344644-58344663 | Msa1297800:intron | 45.0% | |
| ACATTGTGAGTAGAGGAGGA+TGG | - | chr8_3:58344648-58344667 | Msa1297800:intron | 45.0% | |
| GGGATATGGGATTTATCTGC+TGG | - | chr8_3:58344744-58344763 | Msa1297800:intron | 45.0% | |
| TCTATGACGCTTTCTGCTGT+CGG | - | chr8_3:58344793-58344812 | Msa1297800:intron | 45.0% | |
| AGAGGCAAAGCCATAAGCAT+AGG | + | chr8_3:58344850-58344869 | None:intergenic | 45.0% | |
| CAGCATTCATACCAAGCCTT+GGG | + | chr8_3:58344898-58344917 | None:intergenic | 45.0% | |
| ACAGCATTCATACCAAGCCT+TGG | + | chr8_3:58344899-58344918 | None:intergenic | 45.0% | |
| TCTAGAAGGATACACAGCTC+AGG | + | chr8_3:58345788-58345807 | None:intergenic | 45.0% | |
| CACAAACACACATGTAGAGG+AGG | + | chr8_3:58345906-58345925 | None:intergenic | 45.0% | |
| GGAAAGAGGTAAGTTGTCAC+TGG | - | chr8_3:58346064-58346083 | Msa1297800:intron | 45.0% | |
| GGTGTTAGGTAAGTAGGGTA+CGG | + | chr8_3:58346970-58346989 | None:intergenic | 45.0% | |
| GTACCCTACTTACCTAACAC+CGG | - | chr8_3:58346969-58346988 | Msa1297800:intron | 45.0% | |
| TACCCTACTTACCTAACACC+GGG | - | chr8_3:58346970-58346989 | Msa1297800:intron | 45.0% | |
| ! | ATCCCGGTGTTAGGTAAGTA+GGG | + | chr8_3:58346975-58346994 | None:intergenic | 45.0% |
| ! | AATCCCGGTGTTAGGTAAGT+AGG | + | chr8_3:58346976-58346995 | None:intergenic | 45.0% |
| ! | CTTACCTAACACCGGGATTT+TGG | - | chr8_3:58346977-58346996 | Msa1297800:intron | 45.0% |
| TCTATTGAGCAAAGGCTGAC+GGG | + | chr8_3:58347176-58347195 | None:intergenic | 45.0% | |
| GTCTATTGAGCAAAGGCTGA+CGG | + | chr8_3:58347177-58347196 | None:intergenic | 45.0% | |
| GGATCAGTTATGCCTGTAAC+TGG | + | chr8_3:58347223-58347242 | None:intergenic | 45.0% | |
| GTTCCAGCAGAAATGATGCA+TGG | - | chr8_3:58347245-58347264 | Msa1297800:intron | 45.0% | |
| ACTCCATGCATCATTTCTGC+TGG | + | chr8_3:58347251-58347270 | None:intergenic | 45.0% | |
| ATGCATGGAGTACAAGGATG+AGG | - | chr8_3:58347260-58347279 | Msa1297800:intron | 45.0% | |
| TGCATGGAGTACAAGGATGA+GGG | - | chr8_3:58347261-58347280 | Msa1297800:intron | 45.0% | |
| !! | AGAGTGACTTGACTTGGTTG+TGG | - | chr8_3:58347857-58347876 | Msa1297800:intron | 45.0% |
| !! | GAGTGACTTGACTTGGTTGT+GGG | - | chr8_3:58347858-58347877 | Msa1297800:intron | 45.0% |
| ACTTGGTTGTGGGATGTTAG+TGG | - | chr8_3:58347868-58347887 | Msa1297800:intron | 45.0% | |
| CATGATCCATTTGAGGATGG+TGG | - | chr8_3:58347898-58347917 | Msa1297800:CDS | 45.0% | |
| TGATCACCACCATCCTCAAA+TGG | + | chr8_3:58347907-58347926 | None:intergenic | 45.0% | |
| ACACGTCTTGCACTCTATTC+AGG | + | chr8_3:58347987-58348006 | None:intergenic | 45.0% | |
| GGTCAAATCTCTAGGTGATG+TGG | + | chr8_3:58348348-58348367 | None:intergenic | 45.0% | |
| AAGCTCAAAAGGTGAGGATG+AGG | + | chr8_3:58348399-58348418 | None:intergenic | 45.0% | |
| ACCCCAAAAGCAAGCTCAAA+AGG | + | chr8_3:58348410-58348429 | None:intergenic | 45.0% | |
| ACTCCAAAGATGGAGGAACA+AGG | + | chr8_3:58348575-58348594 | None:intergenic | 45.0% | |
| ACCTTAGGTGGAAGGTAGAT+CGG | + | chr8_3:58348633-58348652 | None:intergenic | 45.0% | |
| GAACGTTCAAGATGGACCTT+AGG | + | chr8_3:58348648-58348667 | None:intergenic | 45.0% | |
| TGTGCATGGAACGTTCAAGA+TGG | + | chr8_3:58348656-58348675 | None:intergenic | 45.0% | |
| !!! | CGCCTCTTGAGCTACTTTTT+GGG | + | chr8_3:58348903-58348922 | None:intergenic | 45.0% |
| !!! | TCGCCTCTTGAGCTACTTTT+TGG | + | chr8_3:58348904-58348923 | None:intergenic | 45.0% |
| AAAAAGTAGCTCAAGAGGCG+AGG | - | chr8_3:58348903-58348922 | Msa1297800:intron | 45.0% | |
| !! | AGGATTGGCCAAACCGTATA+AGG | - | chr8_3:58348923-58348942 | Msa1297800:intron | 45.0% |
| GTATGCCTATCTGACACCAA+TGG | - | chr8_3:58349319-58349338 | Msa1297800:five_prime_UTR | 45.0% | |
| ACAATCCATCCGAGTCACAA+AGG | - | chr8_3:58349384-58349403 | Msa1297800:intron | 45.0% | |
| TTGCTGGAACCTTTGTGACT+CGG | + | chr8_3:58349396-58349415 | None:intergenic | 45.0% | |
| CTGGTTGTGAGTTTACTTGC+TGG | + | chr8_3:58349412-58349431 | None:intergenic | 45.0% | |
| GCTACGGAGTGATCACATTA+TGG | + | chr8_3:58349456-58349475 | None:intergenic | 45.0% | |
| !! | CTTTGAAATTCAGCCAGCTG+TGG | + | chr8_3:58349478-58349497 | None:intergenic | 45.0% |
| TGTTGTGGGCAATGAAGTTG+AGG | - | chr8_3:58349503-58349522 | Msa1297800:intron | 45.0% | |
| AGTTGCGAGAAACGCGTATC+GGG | - | chr8_3:58344015-58344034 | Msa1297800:three_prime_UTR | 50.0% | |
| ! | AGTAGAGGAGGATGGCTTGT+AGG | - | chr8_3:58344656-58344675 | Msa1297800:intron | 50.0% |
| ! | GTAGAGGAGGATGGCTTGTA+GGG | - | chr8_3:58344657-58344676 | Msa1297800:intron | 50.0% |
| ! | TAGAGGAGGATGGCTTGTAG+GGG | - | chr8_3:58344658-58344677 | Msa1297800:intron | 50.0% |
| CATACTGACCATTACCGGTC+TGG | - | chr8_3:58344714-58344733 | Msa1297800:intron | 50.0% | |
| ATTACCGGTCTGGCAATGGT+GGG | - | chr8_3:58344724-58344743 | Msa1297800:intron | 50.0% | |
| ATATCCCACCATTGCCAGAC+CGG | + | chr8_3:58344731-58344750 | None:intergenic | 50.0% | |
| ! | GTCTGGCAATGGTGGGATAT+GGG | - | chr8_3:58344731-58344750 | Msa1297800:intron | 50.0% |
| GCAAAGCCATAAGCATAGGC+CGG | + | chr8_3:58344846-58344865 | None:intergenic | 50.0% | |
| ACATGTAGAGGAGGGAGAGA+AGG | + | chr8_3:58345897-58345916 | None:intergenic | 50.0% | |
| GGTAAGTAGGGTACGGTAAG+AGG | + | chr8_3:58346963-58346982 | None:intergenic | 50.0% | |
| CTCTCCAAAATCCCGGTGTT+AGG | + | chr8_3:58346984-58347003 | None:intergenic | 50.0% | |
| !! | CTAACACCGGGATTTTGGAG+AGG | - | chr8_3:58346982-58347001 | Msa1297800:intron | 50.0% |
| TGTGTGCCTCTCCAAAATCC+CGG | + | chr8_3:58346991-58347010 | None:intergenic | 50.0% | |
| ! | CCTGCTGGTCTATTGAGCAA+AGG | + | chr8_3:58347184-58347203 | None:intergenic | 50.0% |
| CCTTTGCTCAATAGACCAGC+AGG | - | chr8_3:58347181-58347200 | Msa1297800:intron | 50.0% | |
| ATGCCTGTAACTGGTACACC+TGG | + | chr8_3:58347214-58347233 | None:intergenic | 50.0% | |
| GCATCATTTCTGCTGGAACG+TGG | + | chr8_3:58347244-58347263 | None:intergenic | 50.0% | |
| GAGTACAAGGATGAGGGAGA+AGG | - | chr8_3:58347267-58347286 | Msa1297800:intron | 50.0% | |
| !! | GGTTGGGAATCTTTTGGGGA+AGG | + | chr8_3:58347473-58347492 | None:intergenic | 50.0% |
| ! | CAGCGGTTGGGAATCTTTTG+GGG | + | chr8_3:58347477-58347496 | None:intergenic | 50.0% |
| ! | CCAGCGGTTGGGAATCTTTT+GGG | + | chr8_3:58347478-58347497 | None:intergenic | 50.0% |
| GGTGTGTGGACAAATGCAAG+TGG | + | chr8_3:58348291-58348310 | None:intergenic | 50.0% | |
| CCAAAGATGGAGGAACAAGG+TGG | + | chr8_3:58348572-58348591 | None:intergenic | 50.0% | |
| CCACCTTGTTCCTCCATCTT+TGG | - | chr8_3:58348569-58348588 | Msa1297800:intron | 50.0% | |
| TCGGATGGAGACACTGCAAA+TGG | + | chr8_3:58348614-58348633 | None:intergenic | 50.0% | |
| TAGGTGGAAGGTAGATCGGA+TGG | + | chr8_3:58348629-58348648 | None:intergenic | 50.0% | |
| TCCGATCTACCTTCCACCTA+AGG | - | chr8_3:58348629-58348648 | Msa1297800:intron | 50.0% | |
| CAAGATGGACCTTAGGTGGA+AGG | + | chr8_3:58348641-58348660 | None:intergenic | 50.0% | |
| CGTTCAAGATGGACCTTAGG+TGG | + | chr8_3:58348645-58348664 | None:intergenic | 50.0% | |
| TATGAAGCGCAGACACTCCT+CGG | - | chr8_3:58348696-58348715 | Msa1297800:intron | 50.0% | |
| GATTAGGTGTGTCCTGGTGT+CGG | - | chr8_3:58348718-58348737 | Msa1297800:intron | 50.0% | |
| !! | GAGCACCATTGGTGTCAGAT+AGG | + | chr8_3:58349327-58349346 | None:intergenic | 50.0% |
| !! | TACTGCAGAAGGAGCACCAT+TGG | + | chr8_3:58349338-58349357 | None:intergenic | 50.0% |
| ATGGTGCTCCTTCTGCAGTA+TGG | - | chr8_3:58349338-58349357 | Msa1297800:intron | 50.0% | |
| TGGTGCTCCTTCTGCAGTAT+GGG | - | chr8_3:58349339-58349358 | Msa1297800:intron | 50.0% | |
| TATCCAGCCCATACTGCAGA+AGG | + | chr8_3:58349349-58349368 | None:intergenic | 50.0% | |
| !! | GCAGTATGGGCTGGATACAT+CGG | - | chr8_3:58349352-58349371 | Msa1297800:intron | 50.0% |
| ! | TGGAACCTTTGTGACTCGGA+TGG | + | chr8_3:58349392-58349411 | None:intergenic | 50.0% |
| ACTCACAACCAGCTGAAGAG+AGG | - | chr8_3:58349420-58349439 | Msa1297800:intron | 50.0% | |
| AATTCAGCCAGCTGTGGCTA+CGG | + | chr8_3:58349472-58349491 | None:intergenic | 50.0% | |
| CGAGAAACGCGTATCGGGTA+AGG | - | chr8_3:58344020-58344039 | Msa1297800:three_prime_UTR | 55.0% | |
| ! | GCGAACGTGTCTGGATTGGA+AGG | + | chr8_3:58344064-58344083 | None:intergenic | 55.0% |
| GCTAGCGAACGTGTCTGGAT+TGG | + | chr8_3:58344068-58344087 | None:intergenic | 55.0% | |
| TGTGTGCTAGCGAACGTGTC+TGG | + | chr8_3:58344073-58344092 | None:intergenic | 55.0% | |
| ! | GATGGCTTGTAGGGGTTGCT+GGG | - | chr8_3:58344666-58344685 | Msa1297800:intron | 55.0% |
| GACCATTACCGGTCTGGCAA+TGG | - | chr8_3:58344720-58344739 | Msa1297800:intron | 55.0% | |
| CACCATTGCCAGACCGGTAA+TGG | + | chr8_3:58344725-58344744 | None:intergenic | 55.0% | |
| CATTACCGGTCTGGCAATGG+TGG | - | chr8_3:58344723-58344742 | Msa1297800:intron | 55.0% | |
| ! | GGTCTGGCAATGGTGGGATA+TGG | - | chr8_3:58344730-58344749 | Msa1297800:intron | 55.0% |
| ACTTGGCCGGCCTATGCTTA+TGG | - | chr8_3:58344837-58344856 | Msa1297800:intron | 55.0% | |
| TGTGCCTGTGCTAATGGGGT+AGG | - | chr8_3:58345067-58345086 | Msa1297800:intron | 55.0% | |
| GTGCCTGTGCTAATGGGGTA+GGG | - | chr8_3:58345068-58345087 | Msa1297800:intron | 55.0% | |
| TGCCTGTGCTAATGGGGTAG+GGG | - | chr8_3:58345069-58345088 | Msa1297800:intron | 55.0% | |
| TGTAGAGGAGGGAGAGAAGG+TGG | + | chr8_3:58345894-58345913 | None:intergenic | 55.0% | |
| GTAACTGGTACACCTGGTGC+AGG | + | chr8_3:58347208-58347227 | None:intergenic | 55.0% | |
| GCACCAGGTGTACCAGTTAC+AGG | - | chr8_3:58347208-58347227 | Msa1297800:intron | 55.0% | |
| ! | GAAGCCCTTTTGGGCCAAAG+AGG | - | chr8_3:58347396-58347415 | Msa1297800:intron | 55.0% |
| CCCAAAAGATTCCCAACCGC+TGG | - | chr8_3:58347475-58347494 | Msa1297800:intron | 55.0% | |
| ! | GCCAGCGGTTGGGAATCTTT+TGG | + | chr8_3:58347479-58347498 | None:intergenic | 55.0% |
| TTCTCGAGAAGGTGAGCCAG+CGG | + | chr8_3:58347494-58347513 | None:intergenic | 55.0% | |
| GGAGGAACAAGGTGGAAACC+AGG | + | chr8_3:58348564-58348583 | None:intergenic | 55.0% | |
| !! | GAGGAGTGTCTGCGCTTCAT+AGG | + | chr8_3:58348697-58348716 | None:intergenic | 55.0% |
| ! | TCCTCGGATTAGGTGTGTCC+TGG | - | chr8_3:58348712-58348731 | Msa1297800:intron | 55.0% |
| ACCAGGACACACCTAATCCG+AGG | + | chr8_3:58348716-58348735 | None:intergenic | 55.0% | |
| GTAGCTCAAGAGGCGAGGAT+TGG | - | chr8_3:58348908-58348927 | Msa1297800:intron | 55.0% | |
| ! | GGATGGCTTGTAGGGGTTGC+TGG | - | chr8_3:58344665-58344684 | Msa1297800:intron | 60.0% |
| GCCTGTGCTAATGGGGTAGG+GGG | - | chr8_3:58345070-58345089 | Msa1297800:intron | 60.0% | |
| ACCCCCTACCCCATTAGCAC+AGG | + | chr8_3:58345074-58345093 | None:intergenic | 60.0% | |
| GAGAAGGTGAGCCAGCGGTT+GGG | + | chr8_3:58347489-58347508 | None:intergenic | 60.0% | |
| GTACAGCGAGTCCACCGAGT+AGG | + | chr8_3:58348500-58348519 | None:intergenic | 60.0% | |
| AGTGCATGTGGGCGTGTGCA+TGG | + | chr8_3:58348670-58348689 | None:intergenic | 60.0% | |
| GCGCAGACACTCCTCGGATT+AGG | - | chr8_3:58348702-58348721 | Msa1297800:intron | 60.0% | |
| ! | TCCTGGTGTCGGACACGCAT+CGG | - | chr8_3:58348729-58348748 | Msa1297800:intron | 60.0% |
| GCTCCTTCTGCAGTATGGGC+TGG | - | chr8_3:58349343-58349362 | Msa1297800:intron | 60.0% | |
| CAACGGCTCCTCTCTTCAGC+TGG | + | chr8_3:58349431-58349450 | None:intergenic | 60.0% | |
| GATCACTCCGTAGCCACAGC+TGG | - | chr8_3:58349462-58349481 | Msa1297800:intron | 60.0% | |
| AGACCAGCAGGACCTGCACC+AGG | - | chr8_3:58347193-58347212 | Msa1297800:intron | 65.0% | |
| ACACCTGGTGCAGGTCCTGC+TGG | + | chr8_3:58347199-58347218 | None:intergenic | 65.0% | |
| CGAGAAGGTGAGCCAGCGGT+TGG | + | chr8_3:58347490-58347509 | None:intergenic | 65.0% | |
| ACCGATGCGTGTCCGACACC+AGG | + | chr8_3:58348733-58348752 | None:intergenic | 65.0% | |
| !! | GGCTGACGGGCTTGCTGCCT+TGG | + | chr8_3:58347163-58347182 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 58344012 | 58349934 | 58344012 | ID=Msa1297800;Name=Msa1297800 |
| chr8_3 | mRNA | 58344012 | 58349934 | 58344012 | ID=Msa1297800-mRNA-1;Parent=Msa1297800;Name=Msa1297800-mRNA-1;_AED=0.08;_eAED=0.08;_QI=264|1|1|1|0.66|0.57|7|471|280 |
| chr8_3 | exon | 58344012 | 58344590 | 58344012 | ID=Msa1297800-mRNA-1:exon:16709;Parent=Msa1297800-mRNA-1 |
| chr8_3 | exon | 58346658 | 58346867 | 58346658 | ID=Msa1297800-mRNA-1:exon:16708;Parent=Msa1297800-mRNA-1 |
| chr8_3 | exon | 58347694 | 58347798 | 58347694 | ID=Msa1297800-mRNA-1:exon:16707;Parent=Msa1297800-mRNA-1 |
| chr8_3 | exon | 58347875 | 58347955 | 58347875 | ID=Msa1297800-mRNA-1:exon:16706;Parent=Msa1297800-mRNA-1 |
| chr8_3 | exon | 58348152 | 58348251 | 58348152 | ID=Msa1297800-mRNA-1:exon:16705;Parent=Msa1297800-mRNA-1 |
| chr8_3 | exon | 58349041 | 58349354 | 58349041 | ID=Msa1297800-mRNA-1:exon:16704;Parent=Msa1297800-mRNA-1 |
| chr8_3 | exon | 58349746 | 58349934 | 58349746 | ID=Msa1297800-mRNA-1:exon:16703;Parent=Msa1297800-mRNA-1 |
| chr8_3 | five_prime_UTR | 58349746 | 58349934 | 58349746 | ID=Msa1297800-mRNA-1:five_prime_utr;Parent=Msa1297800-mRNA-1 |
| chr8_3 | five_prime_UTR | 58349280 | 58349354 | 58349280 | ID=Msa1297800-mRNA-1:five_prime_utr;Parent=Msa1297800-mRNA-1 |
| chr8_3 | CDS | 58349041 | 58349279 | 58349041 | ID=Msa1297800-mRNA-1:cds;Parent=Msa1297800-mRNA-1 |
| chr8_3 | CDS | 58348152 | 58348251 | 58348152 | ID=Msa1297800-mRNA-1:cds;Parent=Msa1297800-mRNA-1 |
| chr8_3 | CDS | 58347875 | 58347955 | 58347875 | ID=Msa1297800-mRNA-1:cds;Parent=Msa1297800-mRNA-1 |
| chr8_3 | CDS | 58347694 | 58347798 | 58347694 | ID=Msa1297800-mRNA-1:cds;Parent=Msa1297800-mRNA-1 |
| chr8_3 | CDS | 58346658 | 58346867 | 58346658 | ID=Msa1297800-mRNA-1:cds;Parent=Msa1297800-mRNA-1 |
| chr8_3 | CDS | 58344483 | 58344590 | 58344483 | ID=Msa1297800-mRNA-1:cds;Parent=Msa1297800-mRNA-1 |
| chr8_3 | three_prime_UTR | 58344012 | 58344482 | 58344012 | ID=Msa1297800-mRNA-1:three_prime_utr;Parent=Msa1297800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
